data_2D87 # _entry.id 2D87 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2D87 pdb_00002d87 10.2210/pdb2d87/pdb RCSB RCSB025108 ? ? WWPDB D_1000025108 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hss001003543.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2D87 _pdbx_database_status.recvd_initial_deposition_date 2005-12-02 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tomizawa, T.' 1 'Kigawa, T.' 2 'Koshiba, S.' 3 'Inoue, M.' 4 'Yokoyama, S.' 5 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 6 # _citation.id primary _citation.title 'Solution structure of the CH domain from human Smoothelin splice isoform L2' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tomizawa, T.' 1 ? primary 'Kigawa, T.' 2 ? primary 'Koshiba, S.' 3 ? primary 'Inoue, M.' 4 ? primary 'Yokoyama, S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Smoothelin splice isoform L2' _entity.formula_weight 14564.282 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'CH domain' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGIKQMLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEVAFSSAETHADC PQLLDTEDMVRLREPDWKCVYTYIQEFYRCLVQKGLVKTKKSSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGIKQMLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEVAFSSAETHADC PQLLDTEDMVRLREPDWKCVYTYIQEFYRCLVQKGLVKTKKSSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hss001003543.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ILE n 1 9 LYS n 1 10 GLN n 1 11 MET n 1 12 LEU n 1 13 LEU n 1 14 ASP n 1 15 TRP n 1 16 CYS n 1 17 ARG n 1 18 ALA n 1 19 LYS n 1 20 THR n 1 21 ARG n 1 22 GLY n 1 23 TYR n 1 24 GLU n 1 25 HIS n 1 26 VAL n 1 27 ASP n 1 28 ILE n 1 29 GLN n 1 30 ASN n 1 31 PHE n 1 32 SER n 1 33 SER n 1 34 SER n 1 35 TRP n 1 36 SER n 1 37 ASP n 1 38 GLY n 1 39 MET n 1 40 ALA n 1 41 PHE n 1 42 CYS n 1 43 ALA n 1 44 LEU n 1 45 VAL n 1 46 HIS n 1 47 ASN n 1 48 PHE n 1 49 PHE n 1 50 PRO n 1 51 GLU n 1 52 ALA n 1 53 PHE n 1 54 ASP n 1 55 TYR n 1 56 GLY n 1 57 GLN n 1 58 LEU n 1 59 SER n 1 60 PRO n 1 61 GLN n 1 62 ASN n 1 63 ARG n 1 64 ARG n 1 65 GLN n 1 66 ASN n 1 67 PHE n 1 68 GLU n 1 69 VAL n 1 70 ALA n 1 71 PHE n 1 72 SER n 1 73 SER n 1 74 ALA n 1 75 GLU n 1 76 THR n 1 77 HIS n 1 78 ALA n 1 79 ASP n 1 80 CYS n 1 81 PRO n 1 82 GLN n 1 83 LEU n 1 84 LEU n 1 85 ASP n 1 86 THR n 1 87 GLU n 1 88 ASP n 1 89 MET n 1 90 VAL n 1 91 ARG n 1 92 LEU n 1 93 ARG n 1 94 GLU n 1 95 PRO n 1 96 ASP n 1 97 TRP n 1 98 LYS n 1 99 CYS n 1 100 VAL n 1 101 TYR n 1 102 THR n 1 103 TYR n 1 104 ILE n 1 105 GLN n 1 106 GLU n 1 107 PHE n 1 108 TYR n 1 109 ARG n 1 110 CYS n 1 111 LEU n 1 112 VAL n 1 113 GLN n 1 114 LYS n 1 115 GLY n 1 116 LEU n 1 117 VAL n 1 118 LYS n 1 119 THR n 1 120 LYS n 1 121 LYS n 1 122 SER n 1 123 SER n 1 124 GLY n 1 125 PRO n 1 126 SER n 1 127 SER n 1 128 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene SMTN _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050425-09 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SMOO_HUMAN _struct_ref.pdbx_db_accession P53814 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;IKQMLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEVAFSSAETHADCPQLLDTE DMVRLREPDWKCVYTYIQEFYRCLVQKGLVKTKKS ; _struct_ref.pdbx_align_begin 801 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2D87 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 122 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P53814 _struct_ref_seq.db_align_beg 801 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 915 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 122 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2D87 GLY A 1 ? UNP P53814 ? ? 'cloning artifact' 1 1 1 2D87 SER A 2 ? UNP P53814 ? ? 'cloning artifact' 2 2 1 2D87 SER A 3 ? UNP P53814 ? ? 'cloning artifact' 3 3 1 2D87 GLY A 4 ? UNP P53814 ? ? 'cloning artifact' 4 4 1 2D87 SER A 5 ? UNP P53814 ? ? 'cloning artifact' 5 5 1 2D87 SER A 6 ? UNP P53814 ? ? 'cloning artifact' 6 6 1 2D87 GLY A 7 ? UNP P53814 ? ? 'cloning artifact' 7 7 1 2D87 SER A 123 ? UNP P53814 ? ? 'cloning artifact' 123 8 1 2D87 GLY A 124 ? UNP P53814 ? ? 'cloning artifact' 124 9 1 2D87 PRO A 125 ? UNP P53814 ? ? 'cloning artifact' 125 10 1 2D87 SER A 126 ? UNP P53814 ? ? 'cloning artifact' 126 11 1 2D87 SER A 127 ? UNP P53814 ? ? 'cloning artifact' 127 12 1 2D87 GLY A 128 ? UNP P53814 ? ? 'cloning artifact' 128 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 296 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.68mM CH domain U-15N,13C; 20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2D87 _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2D87 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function,structures with the lowest energy,structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2D87 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20030801 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.932 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2D87 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2D87 _struct.title 'Solution structure of the CH domain from human Smoothelin splice isoform L2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2D87 _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN, PROTEIN BINDING' _struct_keywords.text ;all alpha, calponin homology domain, actin binding, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, STRUCTURAL PROTEIN, PROTEIN BINDING ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 7 ? THR A 20 ? GLY A 7 THR A 20 1 ? 14 HELX_P HELX_P2 2 GLY A 38 ? PHE A 49 ? GLY A 38 PHE A 49 1 ? 12 HELX_P HELX_P3 3 ASN A 62 ? ASP A 79 ? ASN A 62 ASP A 79 1 ? 18 HELX_P HELX_P4 4 ASP A 85 ? LEU A 92 ? ASP A 85 LEU A 92 1 ? 8 HELX_P HELX_P5 5 ASP A 96 ? GLY A 115 ? ASP A 96 GLY A 115 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 2D87 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2D87 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 MET 11 11 11 MET MET A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 TRP 15 15 15 TRP TRP A . n A 1 16 CYS 16 16 16 CYS CYS A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 HIS 25 25 25 HIS HIS A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 GLN 29 29 29 GLN GLN A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 PHE 31 31 31 PHE PHE A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 TRP 35 35 35 TRP TRP A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 MET 39 39 39 MET MET A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 PHE 41 41 41 PHE PHE A . n A 1 42 CYS 42 42 42 CYS CYS A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 HIS 46 46 46 HIS HIS A . n A 1 47 ASN 47 47 47 ASN ASN A . n A 1 48 PHE 48 48 48 PHE PHE A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 TYR 55 55 55 TYR TYR A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 ASN 66 66 66 ASN ASN A . n A 1 67 PHE 67 67 67 PHE PHE A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 HIS 77 77 77 HIS HIS A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 CYS 80 80 80 CYS CYS A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 THR 86 86 86 THR THR A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 MET 89 89 89 MET MET A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 ARG 91 91 91 ARG ARG A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 ARG 93 93 93 ARG ARG A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 ASP 96 96 96 ASP ASP A . n A 1 97 TRP 97 97 97 TRP TRP A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 CYS 99 99 99 CYS CYS A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 TYR 101 101 101 TYR TYR A . n A 1 102 THR 102 102 102 THR THR A . n A 1 103 TYR 103 103 103 TYR TYR A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 GLU 106 106 106 GLU GLU A . n A 1 107 PHE 107 107 107 PHE PHE A . n A 1 108 TYR 108 108 108 TYR TYR A . n A 1 109 ARG 109 109 109 ARG ARG A . n A 1 110 CYS 110 110 110 CYS CYS A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 GLN 113 113 113 GLN GLN A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 LYS 118 118 118 LYS LYS A . n A 1 119 THR 119 119 119 THR THR A . n A 1 120 LYS 120 120 120 LYS LYS A . n A 1 121 LYS 121 121 121 LYS LYS A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 SER 123 123 123 SER SER A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 PRO 125 125 125 PRO PRO A . n A 1 126 SER 126 126 126 SER SER A . n A 1 127 SER 127 127 127 SER SER A . n A 1 128 GLY 128 128 128 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-06-02 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 23 ? ? -36.76 129.11 2 1 ASP A 27 ? ? -169.15 109.16 3 1 PHE A 31 ? ? -84.95 40.70 4 1 SER A 32 ? ? -103.48 -65.12 5 1 ALA A 40 ? ? -37.08 -70.56 6 1 SER A 73 ? ? -36.98 -35.75 7 1 THR A 76 ? ? -43.42 -73.28 8 1 ASP A 79 ? ? 38.30 46.92 9 1 ASP A 96 ? ? -45.66 108.27 10 2 SER A 2 ? ? -45.57 162.75 11 2 SER A 3 ? ? -169.65 110.29 12 2 SER A 6 ? ? -69.39 94.65 13 2 HIS A 25 ? ? 44.53 28.88 14 2 ASP A 27 ? ? -163.96 106.17 15 2 SER A 32 ? ? -111.53 -70.21 16 2 TYR A 55 ? ? -92.23 -60.89 17 2 GLU A 75 ? ? -36.91 -33.21 18 2 THR A 76 ? ? -38.00 -72.89 19 2 PRO A 81 ? ? -69.74 84.05 20 2 GLN A 82 ? ? -39.87 113.72 21 2 GLU A 94 ? ? -174.31 144.09 22 2 SER A 126 ? ? -34.58 125.00 23 3 THR A 20 ? ? -86.65 31.81 24 3 TYR A 23 ? ? -36.07 131.79 25 3 HIS A 25 ? ? 36.15 30.30 26 3 PHE A 31 ? ? -92.94 44.13 27 3 SER A 32 ? ? -106.06 -68.61 28 3 PRO A 81 ? ? -69.78 92.16 29 3 GLN A 82 ? ? -50.64 103.79 30 3 LYS A 121 ? ? -99.85 56.41 31 3 PRO A 125 ? ? -69.79 84.24 32 3 SER A 126 ? ? -121.06 -55.06 33 4 ASP A 27 ? ? -169.31 105.48 34 4 PHE A 31 ? ? -102.04 42.70 35 4 SER A 32 ? ? -123.74 -69.96 36 4 PHE A 53 ? ? -171.04 137.42 37 4 ARG A 64 ? ? -82.67 -71.50 38 4 GLU A 75 ? ? -39.27 -27.56 39 4 PRO A 81 ? ? -69.75 94.60 40 4 GLN A 82 ? ? -47.84 106.03 41 4 LEU A 83 ? ? -91.47 -64.07 42 4 LYS A 118 ? ? -46.05 154.66 43 4 SER A 122 ? ? 34.40 50.14 44 5 GLN A 10 ? ? -86.62 -73.72 45 5 MET A 11 ? ? -36.95 -34.82 46 5 ASP A 27 ? ? -160.11 105.52 47 5 PHE A 31 ? ? -86.79 49.16 48 5 SER A 34 ? ? -34.32 -33.27 49 5 SER A 36 ? ? -34.82 -33.28 50 5 GLU A 94 ? ? -170.77 142.11 51 5 LYS A 118 ? ? -48.34 176.33 52 5 PRO A 125 ? ? -69.80 2.86 53 5 SER A 126 ? ? -38.19 155.34 54 6 SER A 6 ? ? -110.40 56.38 55 6 ASP A 27 ? ? -162.15 111.16 56 6 PHE A 31 ? ? -85.49 37.36 57 6 SER A 32 ? ? -99.39 -65.71 58 6 SER A 34 ? ? -36.11 -34.75 59 6 SER A 36 ? ? -36.83 -33.35 60 6 THR A 76 ? ? -46.19 -70.69 61 6 PRO A 81 ? ? -69.75 85.00 62 6 GLN A 82 ? ? -41.65 102.38 63 6 GLU A 94 ? ? -171.26 144.00 64 6 PRO A 125 ? ? -69.74 -178.64 65 7 THR A 20 ? ? -87.71 31.22 66 7 PHE A 31 ? ? -81.54 42.76 67 7 SER A 32 ? ? -105.56 -70.34 68 7 SER A 36 ? ? -38.03 -32.82 69 7 GLU A 68 ? ? -51.51 -72.95 70 7 PHE A 71 ? ? -70.27 -70.39 71 7 ASP A 79 ? ? 37.07 50.18 72 7 GLN A 82 ? ? -52.10 109.34 73 7 ARG A 93 ? ? -39.88 -33.04 74 7 TYR A 108 ? ? -48.98 -19.56 75 8 PHE A 31 ? ? -102.85 44.42 76 8 SER A 32 ? ? -106.05 -65.12 77 8 SER A 34 ? ? -37.15 -39.32 78 8 ALA A 40 ? ? -36.17 -70.86 79 8 HIS A 46 ? ? -38.20 -38.04 80 8 SER A 73 ? ? -38.32 -36.59 81 8 THR A 76 ? ? -46.16 -71.49 82 8 PRO A 81 ? ? -69.72 86.20 83 8 GLN A 82 ? ? -42.74 99.51 84 8 LYS A 120 ? ? -49.96 163.20 85 8 SER A 122 ? ? -47.95 155.84 86 9 SER A 5 ? ? -52.60 108.02 87 9 THR A 20 ? ? -86.87 30.00 88 9 PHE A 31 ? ? -82.08 44.11 89 9 PRO A 81 ? ? -69.71 84.53 90 9 GLN A 82 ? ? -35.89 110.09 91 9 LEU A 83 ? ? -100.51 -63.01 92 10 MET A 11 ? ? -34.96 -37.82 93 10 ASP A 27 ? ? -171.65 114.11 94 10 PHE A 31 ? ? -96.61 43.51 95 10 SER A 36 ? ? -37.74 -37.09 96 10 THR A 76 ? ? -35.57 -71.19 97 10 GLN A 82 ? ? -55.80 103.64 98 10 THR A 119 ? ? -93.18 53.28 99 10 LYS A 120 ? ? -48.41 -19.81 100 10 PRO A 125 ? ? -69.79 1.30 101 10 SER A 126 ? ? -44.00 160.16 102 11 MET A 11 ? ? -38.74 -33.66 103 11 ASP A 27 ? ? -165.66 114.15 104 11 SER A 32 ? ? -112.43 -73.88 105 11 ALA A 52 ? ? -38.87 -39.70 106 11 SER A 73 ? ? -38.78 -34.54 107 11 PRO A 81 ? ? -69.77 84.01 108 11 GLN A 82 ? ? -41.61 103.22 109 11 ARG A 93 ? ? -39.41 -39.75 110 12 THR A 20 ? ? -83.81 34.01 111 12 HIS A 25 ? ? 47.05 25.04 112 12 PHE A 31 ? ? -92.30 48.26 113 12 SER A 32 ? ? -122.22 -68.89 114 12 SER A 36 ? ? -35.21 -33.25 115 12 TYR A 55 ? ? -91.62 -64.42 116 12 GLU A 68 ? ? -52.21 -70.47 117 12 PRO A 81 ? ? -69.73 86.99 118 12 GLN A 82 ? ? -41.46 105.99 119 12 LEU A 83 ? ? -96.27 -62.33 120 12 SER A 127 ? ? -171.05 141.26 121 13 PHE A 31 ? ? -102.98 41.31 122 13 SER A 32 ? ? -109.92 -70.96 123 13 SER A 34 ? ? -34.87 -33.02 124 13 HIS A 46 ? ? -38.49 -38.64 125 13 TYR A 55 ? ? -98.99 -67.52 126 13 ASN A 62 ? ? -95.03 51.47 127 13 ASP A 79 ? ? 35.67 45.69 128 13 LYS A 120 ? ? -35.84 120.44 129 13 PRO A 125 ? ? -69.73 85.89 130 13 SER A 127 ? ? -41.45 104.91 131 14 THR A 20 ? ? -90.12 36.35 132 14 TYR A 23 ? ? -35.41 121.43 133 14 SER A 32 ? ? -121.56 -58.77 134 14 ALA A 40 ? ? -39.60 -72.87 135 14 SER A 73 ? ? -37.98 -31.61 136 14 VAL A 90 ? ? -54.79 -70.25 137 14 LYS A 120 ? ? -44.76 109.04 138 15 PHE A 31 ? ? -104.97 40.28 139 15 SER A 32 ? ? -103.98 -62.80 140 15 SER A 34 ? ? -39.35 -26.01 141 15 SER A 36 ? ? -35.97 -30.92 142 15 ALA A 40 ? ? -34.61 -71.53 143 15 ARG A 64 ? ? -91.74 -75.62 144 15 PRO A 81 ? ? -69.75 87.57 145 15 GLU A 94 ? ? -173.20 143.60 146 15 TRP A 97 ? ? -35.82 -34.53 147 15 SER A 122 ? ? -127.42 -54.30 148 16 MET A 11 ? ? -37.71 -33.51 149 16 THR A 20 ? ? -82.52 37.53 150 16 TYR A 23 ? ? -37.32 125.79 151 16 SER A 32 ? ? -127.71 -61.21 152 16 ARG A 64 ? ? -84.77 -71.23 153 16 GLU A 75 ? ? -38.46 -26.74 154 16 GLN A 82 ? ? -68.93 93.27 155 16 LYS A 98 ? ? -34.24 -33.52 156 16 SER A 126 ? ? -34.97 118.41 157 16 SER A 127 ? ? -174.65 128.43 158 17 TYR A 23 ? ? -37.94 116.06 159 17 PHE A 31 ? ? -76.58 48.32 160 17 SER A 32 ? ? -122.06 -70.75 161 17 SER A 36 ? ? -34.82 -33.65 162 17 ASN A 62 ? ? -67.34 98.10 163 17 ARG A 64 ? ? -92.36 -73.56 164 17 ARG A 93 ? ? -39.76 -34.35 165 17 SER A 126 ? ? -53.01 109.79 166 18 SER A 2 ? ? -67.08 97.97 167 18 HIS A 25 ? ? 41.62 28.73 168 18 ASP A 27 ? ? -162.50 111.47 169 18 PHE A 31 ? ? -88.18 45.48 170 18 SER A 34 ? ? -38.34 -27.85 171 18 MET A 39 ? ? -39.15 -37.06 172 18 ARG A 64 ? ? -95.42 -75.62 173 18 THR A 76 ? ? -46.90 -72.75 174 18 LEU A 83 ? ? -96.37 -60.25 175 18 GLU A 94 ? ? -170.25 143.11 176 18 THR A 119 ? ? -56.08 89.13 177 18 SER A 122 ? ? -133.26 -38.23 178 18 SER A 123 ? ? -49.34 171.66 179 19 LYS A 9 ? ? -39.72 -30.00 180 19 GLN A 10 ? ? -79.62 -70.94 181 19 MET A 11 ? ? -36.11 -34.46 182 19 CYS A 16 ? ? -39.11 -39.48 183 19 TYR A 23 ? ? -39.97 125.64 184 19 HIS A 25 ? ? 37.67 40.16 185 19 SER A 32 ? ? -112.01 -75.06 186 19 GLU A 75 ? ? -36.23 -34.51 187 19 ARG A 93 ? ? -39.83 -39.71 188 20 MET A 11 ? ? -35.38 -37.24 189 20 ASP A 27 ? ? -164.96 115.80 190 20 ILE A 28 ? ? -101.72 79.55 191 20 SER A 32 ? ? -114.10 -70.43 192 20 GLU A 94 ? ? -171.41 143.99 193 20 LYS A 98 ? ? -35.52 -39.21 194 20 LYS A 118 ? ? -35.95 135.48 #