HEADER PROTEIN BINDING 02-DEC-05 2D8B TITLE SOLUTION STRUCTURE OF THE SECOND TANDEM COFILIN-DOMAIN OF MOUSE TITLE 2 TWINFILIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: TWINFILIN-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: COFILIN HOMOLOGY DOMAIN, UNP RESIDUES 161-313; COMPND 5 SYNONYM: TWINFILIN, A6 PROTEIN, PROTEIN TYROSINE KINASE 9; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: PTK9; SOURCE 6 EXPRESSION_SYSTEM: CELL-FREE PROTEIN SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P050302-01 KEYWDS CELL-FREE PROTEIN SYNTHESIS, ACTIN-BINDING PROTEIN, DEVELOPMENTAL KEYWDS 2 REGULATION, CELLULAR REMODELING, CYTOSKELETON, MORPHOLOGY, KEYWDS 3 STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL KEYWDS 4 AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 5 INITIATIVE, RSGI, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.K.GORONCY,T.KIGAWA,S.KOSHIBA,M.SATO,N.KOBAYASHI,N.TOCHIO,M.INOUE, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 09-MAR-22 2D8B 1 REMARK SEQADV REVDAT 3 02-FEB-10 2D8B 1 JRNL SOURCE COMPND REVDAT 2 24-FEB-09 2D8B 1 VERSN REVDAT 1 02-JUN-06 2D8B 0 JRNL AUTH A.K.GORONCY,S.KOSHIBA,N.TOCHIO,T.TOMIZAWA,M.SATO,M.INOUE, JRNL AUTH 2 S.WATANABE,Y.HAYASHIZAKI,A.TANAKA,T.KIGAWA,S.YOKOYAMA JRNL TITL NMR SOLUTION STRUCTURES OF ACTIN DEPOLYMERIZING FACTOR JRNL TITL 2 HOMOLOGY DOMAINS JRNL REF PROTEIN SCI. V. 18 2384 2009 JRNL REFN ISSN 0961-8368 JRNL PMID 19768801 JRNL DOI 10.1002/PRO.248 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.2.1 REMARK 3 AUTHORS : BRUKER (XWINNMR), PETER GUNTERT ET AL. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2D8B COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-DEC-05. REMARK 100 THE DEPOSITION ID IS D_1000025112. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.44MM COFILIN HOMOLOGY DOMAIN, REMARK 210 20MM D-TRIS-HCL, 100MM NACL, 1MM REMARK 210 D-DTT, 0.02 % NAN3; 90% H2O, 10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20020425, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.899A, CYANA 2.2.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 11 44.88 -95.83 REMARK 500 1 ASP A 12 -80.82 -74.65 REMARK 500 1 VAL A 13 37.76 39.61 REMARK 500 1 TYR A 47 120.72 -174.27 REMARK 500 1 THR A 64 101.64 -163.29 REMARK 500 1 ASP A 79 27.84 -159.13 REMARK 500 1 TYR A 109 -51.39 -131.52 REMARK 500 1 SER A 112 170.08 -51.93 REMARK 500 1 ILE A 129 -71.67 -55.87 REMARK 500 1 GLN A 133 -69.92 -132.02 REMARK 500 1 ARG A 140 141.16 -178.69 REMARK 500 1 ASN A 146 -68.06 -148.40 REMARK 500 1 LEU A 150 87.07 -68.42 REMARK 500 1 SER A 165 -74.05 -96.62 REMARK 500 2 VAL A 9 129.22 -176.17 REMARK 500 2 HIS A 19 136.54 -170.88 REMARK 500 2 TYR A 47 121.80 -174.51 REMARK 500 2 GLU A 57 71.27 59.91 REMARK 500 2 THR A 64 100.98 -161.11 REMARK 500 2 ILE A 76 109.18 -51.36 REMARK 500 2 SER A 80 141.40 -179.17 REMARK 500 2 TYR A 109 -52.25 -131.43 REMARK 500 2 SER A 112 170.65 -52.01 REMARK 500 2 ILE A 129 -72.21 -56.32 REMARK 500 2 GLN A 133 -69.93 -132.08 REMARK 500 2 ARG A 140 139.41 -176.54 REMARK 500 2 ASN A 146 -67.85 -149.13 REMARK 500 2 LEU A 150 87.03 -68.34 REMARK 500 2 SER A 161 -168.64 -60.85 REMARK 500 3 THR A 11 -73.03 -101.16 REMARK 500 3 GLN A 20 -168.34 -70.80 REMARK 500 3 TYR A 47 119.32 -173.60 REMARK 500 3 GLU A 57 70.77 59.44 REMARK 500 3 THR A 64 114.81 -165.25 REMARK 500 3 SER A 80 145.58 -177.37 REMARK 500 3 TYR A 109 -51.61 -136.21 REMARK 500 3 SER A 112 177.14 -55.76 REMARK 500 3 ILE A 129 -71.68 -57.00 REMARK 500 3 GLN A 133 -69.50 -131.68 REMARK 500 3 ARG A 140 141.08 179.24 REMARK 500 3 ASN A 146 -67.63 -148.80 REMARK 500 3 SER A 164 -40.68 -131.87 REMARK 500 4 VAL A 9 44.39 -99.85 REMARK 500 4 VAL A 13 -74.83 -133.71 REMARK 500 4 THR A 17 148.05 -174.75 REMARK 500 4 LYS A 18 -72.07 -113.85 REMARK 500 4 LEU A 22 -49.33 -142.10 REMARK 500 4 ASN A 46 29.17 -140.38 REMARK 500 4 THR A 64 69.59 -151.35 REMARK 500 4 SER A 80 145.25 -176.77 REMARK 500 REMARK 500 THIS ENTRY HAS 259 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMI002020752.1 RELATED DB: TARGETDB DBREF 2D8B A 8 160 UNP Q91YR1 TWF1_MOUSE 161 313 SEQADV 2D8B GLY A 1 UNP Q91YR1 EXPRESSION TAG SEQADV 2D8B SER A 2 UNP Q91YR1 EXPRESSION TAG SEQADV 2D8B SER A 3 UNP Q91YR1 EXPRESSION TAG SEQADV 2D8B GLY A 4 UNP Q91YR1 EXPRESSION TAG SEQADV 2D8B SER A 5 UNP Q91YR1 EXPRESSION TAG SEQADV 2D8B SER A 6 UNP Q91YR1 EXPRESSION TAG SEQADV 2D8B GLY A 7 UNP Q91YR1 EXPRESSION TAG SEQADV 2D8B SER A 161 UNP Q91YR1 EXPRESSION TAG SEQADV 2D8B GLY A 162 UNP Q91YR1 EXPRESSION TAG SEQADV 2D8B PRO A 163 UNP Q91YR1 EXPRESSION TAG SEQADV 2D8B SER A 164 UNP Q91YR1 EXPRESSION TAG SEQADV 2D8B SER A 165 UNP Q91YR1 EXPRESSION TAG SEQADV 2D8B GLY A 166 UNP Q91YR1 EXPRESSION TAG SEQRES 1 A 166 GLY SER SER GLY SER SER GLY GLU VAL GLN THR ASP VAL SEQRES 2 A 166 SER VAL ASP THR LYS HIS GLN THR LEU GLN GLY VAL ALA SEQRES 3 A 166 PHE PRO ILE SER ARG ASP ALA PHE GLN ALA LEU GLU LYS SEQRES 4 A 166 LEU SER LYS LYS GLN LEU ASN TYR VAL GLN LEU GLU ILE SEQRES 5 A 166 ASP ILE LYS ASN GLU THR ILE ILE LEU ALA ASN THR GLU SEQRES 6 A 166 ASN THR GLU LEU ARG ASP LEU PRO LYS ARG ILE PRO LYS SEQRES 7 A 166 ASP SER ALA ARG TYR HIS PHE PHE LEU TYR LYS HIS SER SEQRES 8 A 166 HIS GLU GLY ASP TYR LEU GLU SER VAL VAL PHE ILE TYR SEQRES 9 A 166 SER MET PRO GLY TYR THR CYS SER ILE ARG GLU ARG MET SEQRES 10 A 166 LEU TYR SER SER CYS LYS SER PRO LEU LEU GLU ILE VAL SEQRES 11 A 166 GLU ARG GLN LEU GLN MET ASP VAL ILE ARG LYS ILE GLU SEQRES 12 A 166 ILE ASP ASN GLY ASP GLU LEU THR ALA ASP PHE LEU TYR SEQRES 13 A 166 ASP GLU VAL HIS SER GLY PRO SER SER GLY HELIX 1 1 SER A 30 LYS A 42 1 13 HELIX 2 2 ASP A 71 ILE A 76 1 6 HELIX 3 3 SER A 112 CYS A 122 1 11 HELIX 4 4 LYS A 123 GLU A 131 1 9 HELIX 5 5 THR A 151 SER A 161 1 11 SHEET 1 A 5 THR A 58 ASN A 63 0 SHEET 2 A 5 GLN A 49 ASP A 53 -1 N GLN A 49 O ALA A 62 SHEET 3 A 5 ARG A 82 HIS A 92 -1 O TYR A 83 N LEU A 50 SHEET 4 A 5 ASP A 95 SER A 105 -1 O VAL A 101 N PHE A 86 SHEET 5 A 5 ARG A 140 ILE A 144 1 O ILE A 142 N PHE A 102 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1