data_2D90 # _entry.id 2D90 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2D90 pdb_00002d90 10.2210/pdb2d90/pdb RCSB RCSB025137 ? ? WWPDB D_1000025137 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id mmt008001497.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2D90 _pdbx_database_status.recvd_initial_deposition_date 2005-12-08 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Qin, X.R.' 1 'Nagashima, T.' 2 'Hayashi, F.' 3 'Yokoyama, S.' 4 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 5 # _citation.id primary _citation.title 'Solution structure of the third PDZ domain of PDZ domain containing protein 1' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Qin, X.R.' 1 ? primary 'Nagashima, T.' 2 ? primary 'Hayashi, F.' 3 ? primary 'Yokoyama, S.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'PDZ domain containing protein 1' _entity.formula_weight 10485.682 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'PDZ domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name ;CFTR-associated protein of 70 kDa, Na/Pi cotransporter C-terminal-associated protein, NaPi-Cap1, Na+, /H+, exchanger regulatory factor 3, Sodium-hydrogen exchanger regulatory factor 3 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGRVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQ TTLLVLDKEAESIYSLSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGRVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQ TTLLVLDKEAESIYSLSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier mmt008001497.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ARG n 1 9 VAL n 1 10 VAL n 1 11 VAL n 1 12 ILE n 1 13 LYS n 1 14 LYS n 1 15 GLY n 1 16 SER n 1 17 ASN n 1 18 GLY n 1 19 TYR n 1 20 GLY n 1 21 PHE n 1 22 TYR n 1 23 LEU n 1 24 ARG n 1 25 ALA n 1 26 GLY n 1 27 PRO n 1 28 GLU n 1 29 GLN n 1 30 LYS n 1 31 GLY n 1 32 GLN n 1 33 ILE n 1 34 ILE n 1 35 LYS n 1 36 ASP n 1 37 ILE n 1 38 GLU n 1 39 PRO n 1 40 GLY n 1 41 SER n 1 42 PRO n 1 43 ALA n 1 44 GLU n 1 45 ALA n 1 46 ALA n 1 47 GLY n 1 48 LEU n 1 49 LYS n 1 50 ASN n 1 51 ASN n 1 52 ASP n 1 53 LEU n 1 54 VAL n 1 55 VAL n 1 56 ALA n 1 57 VAL n 1 58 ASN n 1 59 GLY n 1 60 LYS n 1 61 SER n 1 62 VAL n 1 63 GLU n 1 64 ALA n 1 65 LEU n 1 66 ASP n 1 67 HIS n 1 68 ASP n 1 69 GLY n 1 70 VAL n 1 71 VAL n 1 72 GLU n 1 73 MET n 1 74 ILE n 1 75 ARG n 1 76 LYS n 1 77 GLY n 1 78 GLY n 1 79 ASP n 1 80 GLN n 1 81 THR n 1 82 THR n 1 83 LEU n 1 84 LEU n 1 85 VAL n 1 86 LEU n 1 87 ASP n 1 88 LYS n 1 89 GLU n 1 90 ALA n 1 91 GLU n 1 92 SER n 1 93 ILE n 1 94 TYR n 1 95 SER n 1 96 LEU n 1 97 SER n 1 98 GLY n 1 99 PRO n 1 100 SER n 1 101 SER n 1 102 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Pdzk1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'cell free protein synthesis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050425-05 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PDZD1_MOUSE _struct_ref.pdbx_db_accession Q9JIL4 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 242 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2D90 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 96 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9JIL4 _struct_ref_seq.db_align_beg 242 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 330 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 96 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2D90 GLY A 1 ? UNP Q9JIL4 ? ? 'expression tag' 1 1 1 2D90 SER A 2 ? UNP Q9JIL4 ? ? 'expression tag' 2 2 1 2D90 SER A 3 ? UNP Q9JIL4 ? ? 'expression tag' 3 3 1 2D90 GLY A 4 ? UNP Q9JIL4 ? ? 'expression tag' 4 4 1 2D90 SER A 5 ? UNP Q9JIL4 ? ? 'expression tag' 5 5 1 2D90 SER A 6 ? UNP Q9JIL4 ? ? 'expression tag' 6 6 1 2D90 GLY A 7 ? UNP Q9JIL4 ? ? 'expression tag' 7 7 1 2D90 SER A 97 ? UNP Q9JIL4 ? ? 'expression tag' 97 8 1 2D90 GLY A 98 ? UNP Q9JIL4 ? ? 'expression tag' 98 9 1 2D90 PRO A 99 ? UNP Q9JIL4 ? ? 'expression tag' 99 10 1 2D90 SER A 100 ? UNP Q9JIL4 ? ? 'expression tag' 100 11 1 2D90 SER A 101 ? UNP Q9JIL4 ? ? 'expression tag' 101 12 1 2D90 GLY A 102 ? UNP Q9JIL4 ? ? 'expression tag' 102 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents ;1.14mM 13C,15N-labeled protein; 20mM d-Tris-HCl(pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90%H2O; 10% D2O ; _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.type 1 INOVA Varian 800 ? 2 INOVA Varian 900 ? # _pdbx_nmr_refine.entry_id 2D90 _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2D90 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function,structures with the lowest energy,structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2D90 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection VNMR 6.1C Varian 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9296 'Kobayashi, N' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2D90 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2D90 _struct.title 'Solution structure of the third PDZ domain of PDZ domain containing protein 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2D90 _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text ;PDZ domain, PDZ domain containing 1, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, Protein binding ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id ASP _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 66 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLY _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 77 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ASP _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 66 _struct_conf.end_auth_comp_id GLY _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 77 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 8 ? LYS A 13 ? ARG A 8 LYS A 13 A 2 GLN A 80 ? VAL A 85 ? GLN A 80 VAL A 85 A 3 LEU A 53 ? VAL A 57 ? LEU A 53 VAL A 57 A 4 GLN A 32 ? LYS A 35 ? GLN A 32 LYS A 35 A 5 TYR A 22 ? ALA A 25 ? TYR A 22 ALA A 25 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 10 ? N VAL A 10 O LEU A 83 ? O LEU A 83 A 2 3 O LEU A 84 ? O LEU A 84 N VAL A 55 ? N VAL A 55 A 3 4 O VAL A 54 ? O VAL A 54 N GLN A 32 ? N GLN A 32 A 4 5 O LYS A 35 ? O LYS A 35 N TYR A 22 ? N TYR A 22 # _database_PDB_matrix.entry_id 2D90 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2D90 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 TYR 19 19 19 TYR TYR A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 PHE 21 21 21 PHE PHE A . n A 1 22 TYR 22 22 22 TYR TYR A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 PRO 27 27 27 PRO PRO A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 GLN 29 29 29 GLN GLN A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 GLN 32 32 32 GLN GLN A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 ASN 50 50 50 ASN ASN A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 HIS 67 67 67 HIS HIS A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 MET 73 73 73 MET MET A . n A 1 74 ILE 74 74 74 ILE ILE A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 GLN 80 80 80 GLN GLN A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 THR 82 82 82 THR THR A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 LYS 88 88 88 LYS LYS A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 TYR 94 94 94 TYR TYR A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 PRO 99 99 99 PRO PRO A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 GLY 102 102 102 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-12-08 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 6 ? ? -56.25 86.75 2 1 LYS A 14 ? ? -34.75 128.65 3 1 ASN A 17 ? ? -88.64 44.78 4 1 PRO A 27 ? ? -69.80 -165.55 5 1 GLN A 29 ? ? -42.34 154.72 6 1 LEU A 48 ? ? -59.98 -177.52 7 1 SER A 100 ? ? -39.89 159.95 8 2 SER A 3 ? ? -87.66 40.79 9 2 PRO A 27 ? ? -69.81 -165.54 10 2 LEU A 48 ? ? -55.64 -177.82 11 2 ASP A 79 ? ? -121.99 -51.70 12 2 GLU A 89 ? ? 48.21 25.98 13 2 SER A 95 ? ? -109.17 67.48 14 2 SER A 100 ? ? -61.86 98.90 15 3 LYS A 14 ? ? -34.64 132.81 16 3 ASN A 17 ? ? -100.96 44.66 17 3 PRO A 27 ? ? -69.75 -167.97 18 3 ASP A 36 ? ? 72.85 31.76 19 3 LEU A 48 ? ? -50.00 -178.86 20 3 ASN A 51 ? ? 71.18 32.50 21 3 LEU A 65 ? ? -65.72 -177.93 22 3 ASP A 87 ? ? -121.55 -71.81 23 3 GLU A 89 ? ? -115.83 65.40 24 4 SER A 5 ? ? -127.80 -52.56 25 4 SER A 6 ? ? -53.94 108.14 26 4 LYS A 14 ? ? -34.83 143.94 27 4 ASN A 17 ? ? 35.74 45.72 28 4 PRO A 27 ? ? -69.77 -170.40 29 4 LEU A 48 ? ? -50.51 179.03 30 4 ASP A 79 ? ? -124.62 -51.14 31 4 ASP A 87 ? ? -102.08 -66.57 32 4 GLU A 89 ? ? -101.80 58.56 33 4 ILE A 93 ? ? -36.19 151.77 34 4 PRO A 99 ? ? -69.84 2.76 35 5 SER A 2 ? ? -101.65 42.19 36 5 SER A 6 ? ? -114.70 76.80 37 5 LYS A 14 ? ? -36.03 142.08 38 5 ASN A 17 ? ? 39.60 36.69 39 5 PRO A 27 ? ? -69.75 -164.06 40 5 GLU A 28 ? ? -37.18 -29.40 41 5 GLN A 29 ? ? -56.78 100.92 42 5 LEU A 48 ? ? -53.48 -175.05 43 5 LEU A 65 ? ? -59.20 179.35 44 5 GLU A 89 ? ? -89.17 37.51 45 5 SER A 101 ? ? -55.18 -73.37 46 6 SER A 6 ? ? -64.10 79.09 47 6 LYS A 14 ? ? -34.37 142.81 48 6 ASN A 17 ? ? -112.81 77.91 49 6 PRO A 27 ? ? -69.79 -169.19 50 6 LEU A 48 ? ? -62.80 -174.96 51 6 GLU A 63 ? ? -38.92 -30.31 52 6 LEU A 65 ? ? -60.66 -176.87 53 6 GLU A 89 ? ? -87.26 44.10 54 7 SER A 2 ? ? -49.76 157.56 55 7 GLN A 29 ? ? -40.34 154.82 56 7 LEU A 48 ? ? -53.71 -175.41 57 7 ASN A 51 ? ? 70.04 31.68 58 8 LYS A 14 ? ? -36.72 134.37 59 8 LEU A 48 ? ? -51.87 -179.39 60 8 ASN A 51 ? ? 70.88 32.67 61 8 GLU A 89 ? ? 37.92 28.63 62 8 SER A 92 ? ? -172.34 136.51 63 8 SER A 97 ? ? -99.69 -62.26 64 9 LYS A 14 ? ? -35.35 126.88 65 9 SER A 16 ? ? -112.01 71.38 66 9 PRO A 27 ? ? -69.71 -164.18 67 9 GLU A 28 ? ? -37.51 -28.62 68 9 GLN A 29 ? ? -52.94 91.41 69 9 LEU A 48 ? ? -60.74 -175.00 70 9 SER A 61 ? ? -54.25 108.48 71 9 ASP A 87 ? ? -95.83 -63.39 72 9 GLU A 89 ? ? -90.04 36.94 73 10 SER A 3 ? ? -53.29 172.82 74 10 LYS A 14 ? ? -36.24 129.70 75 10 ASN A 17 ? ? 36.03 49.85 76 10 PRO A 27 ? ? -69.71 -164.21 77 10 LEU A 48 ? ? -57.87 177.40 78 10 ASN A 51 ? ? 71.11 32.23 79 11 LYS A 14 ? ? -34.51 146.17 80 11 ASN A 17 ? ? -106.97 44.55 81 11 PRO A 27 ? ? -69.79 -167.42 82 11 GLU A 28 ? ? -38.23 -31.17 83 11 LEU A 48 ? ? -53.54 -175.45 84 11 ASN A 51 ? ? 74.28 36.06 85 11 LEU A 65 ? ? -58.20 176.01 86 12 LYS A 14 ? ? -34.65 130.49 87 12 ASN A 17 ? ? 36.23 39.55 88 12 ALA A 25 ? ? -59.62 105.58 89 12 PRO A 27 ? ? -69.77 -166.95 90 12 GLU A 28 ? ? -48.92 -19.29 91 12 LEU A 48 ? ? -52.21 -176.14 92 13 LYS A 14 ? ? -37.99 134.13 93 13 SER A 16 ? ? -46.27 -70.03 94 13 ASN A 17 ? ? -107.89 77.98 95 13 PRO A 27 ? ? -69.77 -164.48 96 13 GLN A 29 ? ? -56.84 109.78 97 13 LEU A 48 ? ? -51.58 -178.13 98 13 ASP A 87 ? ? -102.78 -61.20 99 13 PRO A 99 ? ? -69.72 -176.95 100 14 PRO A 27 ? ? -69.74 -170.26 101 14 LEU A 48 ? ? -68.54 -175.00 102 14 GLU A 89 ? ? -97.55 33.62 103 14 PRO A 99 ? ? -69.81 89.91 104 15 SER A 6 ? ? -86.41 41.37 105 15 PRO A 27 ? ? -69.76 -165.30 106 15 GLN A 29 ? ? -39.47 146.91 107 15 LEU A 48 ? ? -62.96 -175.59 108 15 GLU A 63 ? ? -38.82 -26.59 109 15 GLU A 91 ? ? 32.08 36.48 110 15 ILE A 93 ? ? -87.25 30.07 111 15 SER A 95 ? ? -122.35 -54.02 112 15 LEU A 96 ? ? 39.80 43.98 113 16 LYS A 14 ? ? -34.69 143.04 114 16 ALA A 25 ? ? -51.73 104.61 115 16 PRO A 27 ? ? -69.84 -168.98 116 16 GLU A 28 ? ? -36.81 -32.69 117 16 ASP A 36 ? ? 70.06 38.95 118 17 LYS A 14 ? ? -42.30 152.51 119 17 ASN A 17 ? ? -102.33 50.72 120 17 PRO A 27 ? ? -69.78 -174.31 121 17 GLU A 28 ? ? -36.54 -30.70 122 17 LEU A 48 ? ? -58.01 -176.17 123 17 SER A 97 ? ? -169.27 113.09 124 17 PRO A 99 ? ? -69.74 -176.87 125 18 ALA A 25 ? ? -57.26 100.85 126 18 PRO A 27 ? ? -69.75 -163.78 127 18 LEU A 48 ? ? -52.50 -177.16 128 18 GLU A 89 ? ? 35.78 30.90 129 18 GLU A 91 ? ? -42.81 106.99 130 19 LYS A 14 ? ? -37.32 128.00 131 19 SER A 16 ? ? -101.26 68.39 132 19 PRO A 27 ? ? -69.75 -163.68 133 19 LYS A 30 ? ? -34.36 109.60 134 19 LEU A 48 ? ? -50.09 -179.38 135 19 ASP A 79 ? ? -101.48 -61.14 136 19 TYR A 94 ? ? -99.40 47.02 137 19 PRO A 99 ? ? -69.74 -172.00 138 20 PRO A 27 ? ? -69.72 -163.87 139 20 GLU A 28 ? ? -34.47 -33.37 140 20 LEU A 48 ? ? -53.55 -178.81 141 20 ASP A 87 ? ? -72.25 -71.06 142 20 GLU A 89 ? ? -98.51 42.72 #