data_2D9O # _entry.id 2D9O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2D9O pdb_00002d9o 10.2210/pdb2d9o/pdb RCSB RCSB025159 ? ? WWPDB D_1000025159 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsg002001022.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2D9O _pdbx_database_status.recvd_initial_deposition_date 2005-12-12 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tsuda, K.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Terada, T.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of RNA binding domain in Hypothetical protein FLJ10634' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tsuda, K.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Terada, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'DnaJ (Hsp40) homolog, subfamily C, member 17' _entity.formula_weight 10572.020 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RNA recognition motif, Residues 168-254' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Hypothetical protein FLJ 10634' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGQGTPKLKLKWKCKKEDESKGGYSKDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQNEVGLVDN PLKISWLEGQPQDASGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGQGTPKLKLKWKCKKEDESKGGYSKDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQNEVGLVDN PLKISWLEGQPQDASGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsg002001022.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 GLN n 1 9 GLY n 1 10 THR n 1 11 PRO n 1 12 LYS n 1 13 LEU n 1 14 LYS n 1 15 LEU n 1 16 LYS n 1 17 TRP n 1 18 LYS n 1 19 CYS n 1 20 LYS n 1 21 LYS n 1 22 GLU n 1 23 ASP n 1 24 GLU n 1 25 SER n 1 26 LYS n 1 27 GLY n 1 28 GLY n 1 29 TYR n 1 30 SER n 1 31 LYS n 1 32 ASP n 1 33 VAL n 1 34 LEU n 1 35 LEU n 1 36 ARG n 1 37 LEU n 1 38 LEU n 1 39 GLN n 1 40 LYS n 1 41 TYR n 1 42 GLY n 1 43 GLU n 1 44 VAL n 1 45 LEU n 1 46 ASN n 1 47 LEU n 1 48 VAL n 1 49 LEU n 1 50 SER n 1 51 SER n 1 52 LYS n 1 53 LYS n 1 54 PRO n 1 55 GLY n 1 56 THR n 1 57 ALA n 1 58 VAL n 1 59 VAL n 1 60 GLU n 1 61 PHE n 1 62 ALA n 1 63 THR n 1 64 VAL n 1 65 LYS n 1 66 ALA n 1 67 ALA n 1 68 GLU n 1 69 LEU n 1 70 ALA n 1 71 VAL n 1 72 GLN n 1 73 ASN n 1 74 GLU n 1 75 VAL n 1 76 GLY n 1 77 LEU n 1 78 VAL n 1 79 ASP n 1 80 ASN n 1 81 PRO n 1 82 LEU n 1 83 LYS n 1 84 ILE n 1 85 SER n 1 86 TRP n 1 87 LEU n 1 88 GLU n 1 89 GLY n 1 90 GLN n 1 91 PRO n 1 92 GLN n 1 93 ASP n 1 94 ALA n 1 95 SER n 1 96 GLY n 1 97 PRO n 1 98 SER n 1 99 SER n 1 100 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene FLJ10634 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050314-08 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code NP_060633 _struct_ref.pdbx_db_accession 8922563 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QGTPKLKLKWKCKKEDESKGGYSKDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQNEVGLVDNPLKISWL EGQPQDA ; _struct_ref.pdbx_align_begin 168 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2D9O _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 94 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 8922563 _struct_ref_seq.db_align_beg 168 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 254 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 168 _struct_ref_seq.pdbx_auth_seq_align_end 254 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2D9O GLY A 1 ? GB 8922563 ? ? 'cloning artifact' 161 1 1 2D9O SER A 2 ? GB 8922563 ? ? 'cloning artifact' 162 2 1 2D9O SER A 3 ? GB 8922563 ? ? 'cloning artifact' 163 3 1 2D9O GLY A 4 ? GB 8922563 ? ? 'cloning artifact' 164 4 1 2D9O SER A 5 ? GB 8922563 ? ? 'cloning artifact' 165 5 1 2D9O SER A 6 ? GB 8922563 ? ? 'cloning artifact' 166 6 1 2D9O GLY A 7 ? GB 8922563 ? ? 'cloning artifact' 167 7 1 2D9O SER A 95 ? GB 8922563 ? ? 'cloning artifact' 255 8 1 2D9O GLY A 96 ? GB 8922563 ? ? 'cloning artifact' 256 9 1 2D9O PRO A 97 ? GB 8922563 ? ? 'cloning artifact' 257 10 1 2D9O SER A 98 ? GB 8922563 ? ? 'cloning artifact' 258 11 1 2D9O SER A 99 ? GB 8922563 ? ? 'cloning artifact' 259 12 1 2D9O GLY A 100 ? GB 8922563 ? ? 'cloning artifact' 260 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '20mM d-Tris-HCl(pH 7.0), 100mM NaCl, 1mM d-DTT, 0.02% NaN3, 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2D9O _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2D9O _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function,structures with the lowest energy, structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2D9O _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20030801 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9321 'Kobayashi, N.' 4 'structure solution' CYANA 2.0 'Guntert, P.' 5 refinement CYANA 2.0 'Guntert, P.' 6 # _exptl.entry_id 2D9O _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2D9O _struct.title 'Solution structure of RNA binding domain in Hypothetical protein FLJ10634' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2D9O _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;RRM domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RNA binding protein ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 30 ? LYS A 40 ? SER A 190 LYS A 200 1 ? 11 HELX_P HELX_P2 2 THR A 63 ? ASN A 73 ? THR A 223 ASN A 233 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 44 ? SER A 50 ? VAL A 204 SER A 210 A 2 THR A 56 ? PHE A 61 ? THR A 216 PHE A 221 A 3 LYS A 12 ? LYS A 16 ? LYS A 172 LYS A 176 A 4 LYS A 83 ? SER A 85 ? LYS A 243 SER A 245 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASN A 46 ? N ASN A 206 O GLU A 60 ? O GLU A 220 A 2 3 O VAL A 59 ? O VAL A 219 N LEU A 13 ? N LEU A 173 A 3 4 N LYS A 14 ? N LYS A 174 O SER A 85 ? O SER A 245 # _database_PDB_matrix.entry_id 2D9O _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2D9O _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 161 161 GLY GLY A . n A 1 2 SER 2 162 162 SER SER A . n A 1 3 SER 3 163 163 SER SER A . n A 1 4 GLY 4 164 164 GLY GLY A . n A 1 5 SER 5 165 165 SER SER A . n A 1 6 SER 6 166 166 SER SER A . n A 1 7 GLY 7 167 167 GLY GLY A . n A 1 8 GLN 8 168 168 GLN GLN A . n A 1 9 GLY 9 169 169 GLY GLY A . n A 1 10 THR 10 170 170 THR THR A . n A 1 11 PRO 11 171 171 PRO PRO A . n A 1 12 LYS 12 172 172 LYS LYS A . n A 1 13 LEU 13 173 173 LEU LEU A . n A 1 14 LYS 14 174 174 LYS LYS A . n A 1 15 LEU 15 175 175 LEU LEU A . n A 1 16 LYS 16 176 176 LYS LYS A . n A 1 17 TRP 17 177 177 TRP TRP A . n A 1 18 LYS 18 178 178 LYS LYS A . n A 1 19 CYS 19 179 179 CYS CYS A . n A 1 20 LYS 20 180 180 LYS LYS A . n A 1 21 LYS 21 181 181 LYS LYS A . n A 1 22 GLU 22 182 182 GLU GLU A . n A 1 23 ASP 23 183 183 ASP ASP A . n A 1 24 GLU 24 184 184 GLU GLU A . n A 1 25 SER 25 185 185 SER SER A . n A 1 26 LYS 26 186 186 LYS LYS A . n A 1 27 GLY 27 187 187 GLY GLY A . n A 1 28 GLY 28 188 188 GLY GLY A . n A 1 29 TYR 29 189 189 TYR TYR A . n A 1 30 SER 30 190 190 SER SER A . n A 1 31 LYS 31 191 191 LYS LYS A . n A 1 32 ASP 32 192 192 ASP ASP A . n A 1 33 VAL 33 193 193 VAL VAL A . n A 1 34 LEU 34 194 194 LEU LEU A . n A 1 35 LEU 35 195 195 LEU LEU A . n A 1 36 ARG 36 196 196 ARG ARG A . n A 1 37 LEU 37 197 197 LEU LEU A . n A 1 38 LEU 38 198 198 LEU LEU A . n A 1 39 GLN 39 199 199 GLN GLN A . n A 1 40 LYS 40 200 200 LYS LYS A . n A 1 41 TYR 41 201 201 TYR TYR A . n A 1 42 GLY 42 202 202 GLY GLY A . n A 1 43 GLU 43 203 203 GLU GLU A . n A 1 44 VAL 44 204 204 VAL VAL A . n A 1 45 LEU 45 205 205 LEU LEU A . n A 1 46 ASN 46 206 206 ASN ASN A . n A 1 47 LEU 47 207 207 LEU LEU A . n A 1 48 VAL 48 208 208 VAL VAL A . n A 1 49 LEU 49 209 209 LEU LEU A . n A 1 50 SER 50 210 210 SER SER A . n A 1 51 SER 51 211 211 SER SER A . n A 1 52 LYS 52 212 212 LYS LYS A . n A 1 53 LYS 53 213 213 LYS LYS A . n A 1 54 PRO 54 214 214 PRO PRO A . n A 1 55 GLY 55 215 215 GLY GLY A . n A 1 56 THR 56 216 216 THR THR A . n A 1 57 ALA 57 217 217 ALA ALA A . n A 1 58 VAL 58 218 218 VAL VAL A . n A 1 59 VAL 59 219 219 VAL VAL A . n A 1 60 GLU 60 220 220 GLU GLU A . n A 1 61 PHE 61 221 221 PHE PHE A . n A 1 62 ALA 62 222 222 ALA ALA A . n A 1 63 THR 63 223 223 THR THR A . n A 1 64 VAL 64 224 224 VAL VAL A . n A 1 65 LYS 65 225 225 LYS LYS A . n A 1 66 ALA 66 226 226 ALA ALA A . n A 1 67 ALA 67 227 227 ALA ALA A . n A 1 68 GLU 68 228 228 GLU GLU A . n A 1 69 LEU 69 229 229 LEU LEU A . n A 1 70 ALA 70 230 230 ALA ALA A . n A 1 71 VAL 71 231 231 VAL VAL A . n A 1 72 GLN 72 232 232 GLN GLN A . n A 1 73 ASN 73 233 233 ASN ASN A . n A 1 74 GLU 74 234 234 GLU GLU A . n A 1 75 VAL 75 235 235 VAL VAL A . n A 1 76 GLY 76 236 236 GLY GLY A . n A 1 77 LEU 77 237 237 LEU LEU A . n A 1 78 VAL 78 238 238 VAL VAL A . n A 1 79 ASP 79 239 239 ASP ASP A . n A 1 80 ASN 80 240 240 ASN ASN A . n A 1 81 PRO 81 241 241 PRO PRO A . n A 1 82 LEU 82 242 242 LEU LEU A . n A 1 83 LYS 83 243 243 LYS LYS A . n A 1 84 ILE 84 244 244 ILE ILE A . n A 1 85 SER 85 245 245 SER SER A . n A 1 86 TRP 86 246 246 TRP TRP A . n A 1 87 LEU 87 247 247 LEU LEU A . n A 1 88 GLU 88 248 248 GLU GLU A . n A 1 89 GLY 89 249 249 GLY GLY A . n A 1 90 GLN 90 250 250 GLN GLN A . n A 1 91 PRO 91 251 251 PRO PRO A . n A 1 92 GLN 92 252 252 GLN GLN A . n A 1 93 ASP 93 253 253 ASP ASP A . n A 1 94 ALA 94 254 254 ALA ALA A . n A 1 95 SER 95 255 255 SER SER A . n A 1 96 GLY 96 256 256 GLY GLY A . n A 1 97 PRO 97 257 257 PRO PRO A . n A 1 98 SER 98 258 258 SER SER A . n A 1 99 SER 99 259 259 SER SER A . n A 1 100 GLY 100 260 260 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-06-12 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 171 ? ? -69.81 84.08 2 1 GLU A 182 ? ? -35.09 93.46 3 1 GLN A 232 ? ? -106.88 -60.70 4 1 ASN A 233 ? ? -67.03 -74.63 5 1 PRO A 241 ? ? -69.76 93.36 6 1 LEU A 242 ? ? -37.71 152.05 7 1 SER A 255 ? ? -106.12 41.59 8 2 PRO A 171 ? ? -69.84 85.63 9 2 VAL A 204 ? ? -57.74 104.77 10 2 GLN A 232 ? ? -104.99 -71.69 11 2 ASN A 233 ? ? -50.77 -73.42 12 2 PRO A 241 ? ? -69.76 93.11 13 2 LEU A 242 ? ? -38.10 153.72 14 3 SER A 162 ? ? -36.33 127.54 15 3 PRO A 171 ? ? -69.74 80.03 16 3 LYS A 181 ? ? -52.01 173.29 17 3 GLU A 182 ? ? -60.26 88.64 18 3 GLU A 203 ? ? -68.02 83.78 19 3 GLN A 232 ? ? -97.62 -66.27 20 3 PRO A 241 ? ? -69.77 93.18 21 4 PRO A 171 ? ? -69.78 81.05 22 4 LYS A 178 ? ? -49.96 152.68 23 4 GLU A 182 ? ? 36.70 48.23 24 4 ASP A 183 ? ? -95.13 -61.33 25 4 LYS A 225 ? ? -36.74 -71.62 26 4 GLN A 232 ? ? -91.69 -75.13 27 4 ASN A 233 ? ? -47.35 -70.99 28 4 PRO A 241 ? ? -69.79 95.69 29 4 LEU A 242 ? ? -34.20 147.77 30 5 PRO A 171 ? ? -69.78 79.93 31 5 LYS A 178 ? ? -64.82 98.62 32 5 GLU A 203 ? ? -65.73 99.86 33 5 SER A 210 ? ? -47.92 174.54 34 5 LYS A 212 ? ? -126.85 -60.37 35 5 GLN A 232 ? ? -91.81 -72.87 36 5 ASN A 233 ? ? -54.87 -74.95 37 5 GLU A 234 ? ? -43.97 109.88 38 5 PRO A 241 ? ? -69.81 95.02 39 5 LEU A 242 ? ? -38.54 158.22 40 5 SER A 258 ? ? -36.81 -73.98 41 6 GLN A 168 ? ? -45.58 154.41 42 6 PRO A 171 ? ? -69.76 81.48 43 6 GLN A 232 ? ? -90.05 -69.32 44 6 ASN A 233 ? ? -54.27 -74.52 45 6 PRO A 241 ? ? -69.73 94.90 46 6 LEU A 242 ? ? -34.18 148.25 47 7 SER A 162 ? ? 37.12 42.99 48 7 PRO A 171 ? ? -69.78 80.26 49 7 CYS A 179 ? ? -174.85 148.81 50 7 GLU A 182 ? ? -80.44 44.37 51 7 TYR A 201 ? ? -91.22 -63.40 52 7 GLU A 203 ? ? -55.16 94.67 53 7 SER A 211 ? ? -90.49 -64.15 54 7 GLN A 232 ? ? -100.31 -66.40 55 7 PRO A 241 ? ? -69.76 93.56 56 7 LEU A 242 ? ? -35.93 153.16 57 7 GLN A 252 ? ? -171.85 132.33 58 8 PRO A 171 ? ? -69.79 80.16 59 8 GLU A 182 ? ? -87.12 46.95 60 8 GLN A 232 ? ? -90.02 -69.38 61 8 ASN A 233 ? ? -50.26 -73.91 62 8 PRO A 241 ? ? -69.75 93.35 63 8 LEU A 242 ? ? -35.40 143.56 64 8 TRP A 246 ? ? -69.82 95.06 65 8 SER A 258 ? ? -170.42 119.51 66 9 PRO A 171 ? ? -69.81 89.55 67 9 LYS A 178 ? ? -50.78 172.02 68 9 CYS A 179 ? ? -172.92 138.94 69 9 GLU A 184 ? ? -61.55 97.21 70 9 LYS A 191 ? ? -34.38 -38.57 71 9 GLN A 232 ? ? -101.90 -73.08 72 9 PRO A 241 ? ? -69.68 97.91 73 9 LEU A 242 ? ? -37.93 147.70 74 9 PRO A 251 ? ? -69.78 2.38 75 9 PRO A 257 ? ? -69.74 93.89 76 10 SER A 165 ? ? -109.70 -64.39 77 10 GLN A 168 ? ? -34.92 119.40 78 10 PRO A 171 ? ? -69.71 81.75 79 10 LEU A 197 ? ? -38.31 -39.33 80 10 GLN A 199 ? ? -35.80 -36.18 81 10 SER A 211 ? ? -95.58 -60.84 82 10 ALA A 217 ? ? -175.04 -179.53 83 10 GLN A 232 ? ? -98.51 -69.82 84 10 ASN A 233 ? ? -54.19 -73.60 85 10 PRO A 241 ? ? -69.73 92.36 86 10 LEU A 242 ? ? -35.91 153.08 87 10 ASP A 253 ? ? -47.84 109.43 88 10 SER A 259 ? ? -43.57 109.19 89 11 PRO A 171 ? ? -69.78 80.67 90 11 LYS A 181 ? ? -49.70 156.52 91 11 GLU A 182 ? ? -45.76 97.39 92 11 SER A 210 ? ? -38.73 145.44 93 11 GLN A 232 ? ? -90.42 -75.07 94 11 ASN A 233 ? ? -53.42 -75.17 95 11 PRO A 241 ? ? -69.80 97.07 96 11 LEU A 242 ? ? -42.09 164.10 97 11 LEU A 247 ? ? -122.40 -75.02 98 11 SER A 255 ? ? -38.27 -31.58 99 12 PRO A 171 ? ? -69.70 82.11 100 12 GLU A 182 ? ? 37.90 50.43 101 12 ASP A 183 ? ? -88.61 41.93 102 12 LYS A 200 ? ? -38.62 -27.29 103 12 TYR A 201 ? ? -93.92 -66.06 104 12 SER A 211 ? ? -120.18 -55.52 105 12 GLN A 232 ? ? -92.08 -71.43 106 12 PRO A 241 ? ? -69.78 94.27 107 12 LEU A 242 ? ? -39.88 160.74 108 12 GLU A 248 ? ? -161.28 108.05 109 12 ASP A 253 ? ? -92.67 40.92 110 13 PRO A 171 ? ? -69.77 81.33 111 13 GLU A 182 ? ? -88.17 41.83 112 13 LYS A 186 ? ? -134.10 -50.16 113 13 GLU A 203 ? ? -65.19 84.92 114 13 SER A 210 ? ? -57.58 108.08 115 13 ASN A 233 ? ? -52.96 -71.03 116 13 PRO A 241 ? ? -69.76 91.23 117 13 LEU A 242 ? ? -37.80 142.22 118 13 TRP A 246 ? ? -66.78 98.59 119 13 ASP A 253 ? ? -98.56 42.60 120 13 ALA A 254 ? ? -56.64 96.13 121 13 PRO A 257 ? ? -69.71 1.71 122 14 PRO A 171 ? ? -69.78 81.28 123 14 LYS A 181 ? ? -81.11 -70.51 124 14 LYS A 212 ? ? -74.17 -75.55 125 14 GLN A 232 ? ? -99.26 -72.96 126 14 PRO A 241 ? ? -69.80 97.18 127 14 LEU A 242 ? ? -37.34 139.52 128 14 GLU A 248 ? ? -173.32 121.29 129 15 PRO A 171 ? ? -69.73 85.37 130 15 LYS A 181 ? ? -81.67 43.61 131 15 GLU A 184 ? ? -122.79 -54.19 132 15 GLU A 203 ? ? -61.28 84.22 133 15 GLN A 232 ? ? -94.55 -63.10 134 15 PRO A 241 ? ? -69.70 90.28 135 15 LEU A 242 ? ? -36.20 139.24 136 15 SER A 255 ? ? -131.51 -52.73 137 16 SER A 162 ? ? 39.48 45.14 138 16 SER A 165 ? ? 36.95 51.63 139 16 PRO A 171 ? ? -69.72 83.35 140 16 CYS A 179 ? ? -99.42 -74.71 141 16 ASP A 183 ? ? -174.60 120.07 142 16 TYR A 201 ? ? -93.94 -66.86 143 16 SER A 210 ? ? -53.40 179.05 144 16 GLN A 232 ? ? -101.50 -65.41 145 16 ASN A 233 ? ? -53.18 -75.23 146 16 PRO A 241 ? ? -69.76 92.86 147 16 LEU A 242 ? ? -38.05 157.17 148 16 PRO A 257 ? ? -69.81 1.08 149 17 PRO A 171 ? ? -69.73 81.07 150 17 GLU A 184 ? ? 34.50 41.86 151 17 GLN A 199 ? ? -37.41 -71.40 152 17 LYS A 200 ? ? -34.31 -32.97 153 17 VAL A 204 ? ? -41.47 106.76 154 17 GLN A 232 ? ? -109.07 -68.46 155 17 ASN A 233 ? ? -45.92 -70.43 156 17 PRO A 241 ? ? -69.72 92.29 157 17 LEU A 242 ? ? -34.00 143.01 158 17 PRO A 257 ? ? -69.77 97.69 159 18 PRO A 171 ? ? -69.72 81.60 160 18 LYS A 181 ? ? -50.99 90.06 161 18 GLU A 182 ? ? 34.22 54.74 162 18 GLU A 184 ? ? -85.29 46.27 163 18 LYS A 200 ? ? -36.49 -30.95 164 18 TYR A 201 ? ? -92.06 -60.23 165 18 GLN A 232 ? ? -109.80 -69.25 166 18 PRO A 241 ? ? -69.73 92.65 167 18 LEU A 242 ? ? -34.75 140.32 168 18 ASP A 253 ? ? -66.86 82.94 169 19 PRO A 171 ? ? -69.78 80.47 170 19 GLU A 184 ? ? -60.50 93.95 171 19 GLU A 203 ? ? -64.33 92.61 172 19 PRO A 241 ? ? -69.73 91.71 173 19 LEU A 242 ? ? -34.82 144.98 174 19 PRO A 251 ? ? -69.76 2.70 175 19 GLN A 252 ? ? -34.47 106.42 176 19 PRO A 257 ? ? -69.78 0.53 177 20 SER A 165 ? ? -56.40 104.50 178 20 SER A 166 ? ? -49.33 176.58 179 20 PRO A 171 ? ? -69.79 88.42 180 20 LYS A 178 ? ? -51.15 101.10 181 20 LYS A 181 ? ? 33.08 35.64 182 20 GLU A 182 ? ? -133.98 -50.19 183 20 GLU A 184 ? ? -85.58 42.67 184 20 LYS A 186 ? ? -100.68 -61.43 185 20 GLU A 203 ? ? -69.22 88.95 186 20 VAL A 204 ? ? -44.63 109.96 187 20 SER A 211 ? ? -100.54 -62.27 188 20 GLN A 232 ? ? -88.67 -72.45 189 20 ASN A 233 ? ? -49.26 -73.33 190 20 PRO A 241 ? ? -69.80 95.59 191 20 LEU A 242 ? ? -35.64 152.56 192 20 GLU A 248 ? ? -163.88 112.63 193 20 ALA A 254 ? ? -62.92 84.02 #