HEADER SIGNALING PROTEIN 13-DEC-05 2D9Z TITLE SOLUTION STRUCTURE OF THE PH DOMAIN OF PROTEIN KINASE C, NU TYPE FROM TITLE 2 HUMAN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN KINASE C, NU TYPE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PH DOMAIN; COMPND 5 SYNONYM: NPKC-NU, PROTEIN KINASE EPK2; COMPND 6 EC: 2.7.1.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PRKCN, EPK2; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P050711-24; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS PH DOMAIN, PROTEIN KINASE C NU TYPE, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, KEYWDS 3 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, SIGNALING KEYWDS 4 PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.LI,T.TOMIZAWA,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 29-MAY-24 2D9Z 1 REMARK REVDAT 3 09-MAR-22 2D9Z 1 REMARK SEQADV REVDAT 2 24-FEB-09 2D9Z 1 VERSN REVDAT 1 02-JAN-07 2D9Z 0 JRNL AUTH H.LI,T.TOMIZAWA,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE PH DOMAIN OF PROTEIN KINASE C, NU JRNL TITL 2 TYPE FROM HUMAN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2D9Z COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-DEC-05. REMARK 100 THE DEPOSITION ID IS D_1000025170. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.42MM PH DOMAIN U-15N,13C; 20MM REMARK 210 D-TRIS-HCL(PH 7.0); 100MM NACL; REMARK 210 1MM D-DTT; 0.02% NAN3; 90% H2O, REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.932, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION,STRUCTURES WITH REMARK 210 THE LEAST RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 3 58.71 -106.27 REMARK 500 1 LEU A 23 100.20 -48.93 REMARK 500 1 LYS A 34 -68.57 -102.98 REMARK 500 1 LYS A 46 132.87 -35.33 REMARK 500 1 TYR A 48 -64.73 -96.53 REMARK 500 1 LEU A 53 -31.97 -39.29 REMARK 500 1 ILE A 56 94.09 -50.52 REMARK 500 1 ARG A 58 -178.18 -170.08 REMARK 500 1 ASP A 64 105.10 -58.80 REMARK 500 1 PHE A 65 57.35 -110.99 REMARK 500 1 ASP A 94 119.96 -174.25 REMARK 500 1 SER A 95 79.26 -108.76 REMARK 500 1 PRO A 99 2.83 -69.71 REMARK 500 2 SER A 5 112.96 -165.45 REMARK 500 2 ASN A 22 45.89 -78.90 REMARK 500 2 ARG A 24 135.32 -35.75 REMARK 500 2 LYS A 34 -69.92 -98.28 REMARK 500 2 LEU A 53 -25.87 -39.12 REMARK 500 2 PRO A 62 -164.26 -69.75 REMARK 500 2 ASN A 67 41.15 -99.05 REMARK 500 2 SER A 69 150.66 -42.62 REMARK 500 2 PRO A 74 -171.50 -69.74 REMARK 500 2 HIS A 97 89.04 -64.18 REMARK 500 2 SER A 124 95.47 -56.79 REMARK 500 3 LEU A 23 92.16 -43.37 REMARK 500 3 LYS A 34 -67.27 -108.52 REMARK 500 3 SER A 45 -33.79 -39.95 REMARK 500 3 ASN A 73 96.47 -33.13 REMARK 500 3 PRO A 74 -175.21 -69.78 REMARK 500 3 ASP A 82 -29.52 -36.73 REMARK 500 3 THR A 83 -71.27 -77.02 REMARK 500 3 SER A 95 178.28 -51.88 REMARK 500 3 PRO A 99 1.84 -69.77 REMARK 500 3 PRO A 126 99.75 -69.84 REMARK 500 4 MET A 8 130.18 -37.29 REMARK 500 4 ASN A 22 41.76 -85.16 REMARK 500 4 LYS A 34 -69.29 -95.26 REMARK 500 4 PRO A 62 -165.66 -69.75 REMARK 500 4 PHE A 65 46.75 -99.13 REMARK 500 4 GLN A 70 126.44 -39.29 REMARK 500 4 ASP A 82 -38.88 -34.75 REMARK 500 4 THR A 83 -70.57 -66.42 REMARK 500 4 HIS A 97 126.50 -37.97 REMARK 500 4 PRO A 99 2.87 -69.71 REMARK 500 5 VAL A 9 -54.80 -121.56 REMARK 500 5 ASN A 22 32.10 -84.92 REMARK 500 5 LYS A 34 -72.87 -99.93 REMARK 500 5 GLU A 42 41.98 -81.44 REMARK 500 5 LEU A 53 -39.48 -34.38 REMARK 500 5 PRO A 74 -164.50 -69.77 REMARK 500 REMARK 500 THIS ENTRY HAS 238 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED DBREF 2D9Z A 8 123 UNP O94806 KPCN_HUMAN 417 532 SEQADV 2D9Z GLY A 1 UNP O94806 CLONING ARTIFACT SEQADV 2D9Z SER A 2 UNP O94806 CLONING ARTIFACT SEQADV 2D9Z SER A 3 UNP O94806 CLONING ARTIFACT SEQADV 2D9Z GLY A 4 UNP O94806 CLONING ARTIFACT SEQADV 2D9Z SER A 5 UNP O94806 CLONING ARTIFACT SEQADV 2D9Z SER A 6 UNP O94806 CLONING ARTIFACT SEQADV 2D9Z GLY A 7 UNP O94806 CLONING ARTIFACT SEQADV 2D9Z SER A 124 UNP O94806 CLONING ARTIFACT SEQADV 2D9Z GLY A 125 UNP O94806 CLONING ARTIFACT SEQADV 2D9Z PRO A 126 UNP O94806 CLONING ARTIFACT SEQADV 2D9Z SER A 127 UNP O94806 CLONING ARTIFACT SEQADV 2D9Z SER A 128 UNP O94806 CLONING ARTIFACT SEQADV 2D9Z GLY A 129 UNP O94806 CLONING ARTIFACT SEQRES 1 A 129 GLY SER SER GLY SER SER GLY MET VAL LYS GLU GLY TRP SEQRES 2 A 129 MET VAL HIS TYR THR SER ARG ASP ASN LEU ARG LYS ARG SEQRES 3 A 129 HIS TYR TRP ARG LEU ASP SER LYS CYS LEU THR LEU PHE SEQRES 4 A 129 GLN ASN GLU SER GLY SER LYS TYR TYR LYS GLU ILE PRO SEQRES 5 A 129 LEU SER GLU ILE LEU ARG ILE SER SER PRO ARG ASP PHE SEQRES 6 A 129 THR ASN ILE SER GLN GLY SER ASN PRO HIS CYS PHE GLU SEQRES 7 A 129 ILE ILE THR ASP THR MET VAL TYR PHE VAL GLY GLU ASN SEQRES 8 A 129 ASN GLY ASP SER SER HIS ASN PRO VAL LEU ALA ALA THR SEQRES 9 A 129 GLY VAL GLY LEU ASP VAL ALA GLN SER TRP GLU LYS ALA SEQRES 10 A 129 ILE ARG GLN ALA LEU MET SER GLY PRO SER SER GLY HELIX 1 1 LEU A 108 MET A 123 1 16 SHEET 1 A 7 LYS A 49 ILE A 51 0 SHEET 2 A 7 CYS A 35 PHE A 39 -1 SHEET 3 A 7 LYS A 25 ASP A 32 -1 SHEET 4 A 7 VAL A 9 THR A 18 -1 SHEET 5 A 7 VAL A 85 VAL A 88 -1 SHEET 6 A 7 PHE A 77 THR A 81 -1 SHEET 7 A 7 LEU A 57 ILE A 59 -1 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1