HEADER DNA BINDING PROTEIN 13-DEC-05 2DA7 TITLE SOLUTION STRUCTURE OF THE HOMEOBOX DOMAIN OF ZINC FINGER HOMEOBOX TITLE 2 PROTEIN 1B (SMAD INTERACTING PROTEIN 1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZINC FINGER HOMEOBOX PROTEIN 1B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HOMEOBOX DOMAIN; COMPND 5 SYNONYM: SMAD INTERACTING PROTEIN 1, SMADIP1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ZFHX1B; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P050404-18; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS HOMEOBOX DOMAIN, THREE HELICES WITH THE DNA BINDING HELIX-TURN-HELIX KEYWDS 2 MOTIF, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 3 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 4 GENOMICS/PROTEOMICS INITIATIVE, RSGI, DNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.OHNISHI,T.KIGAWA,M.SATO,S.KOSHIBA,M.INOUE,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 29-MAY-24 2DA7 1 REMARK REVDAT 3 09-MAR-22 2DA7 1 REMARK SEQADV REVDAT 2 24-FEB-09 2DA7 1 VERSN REVDAT 1 26-DEC-06 2DA7 0 JRNL AUTH S.OHNISHI,T.KIGAWA,M.SATO,S.KOSHIBA,M.INOUE,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE HOMEOBOX DOMAIN OF ZINC FINGER JRNL TITL 2 HOMEOBOX PROTEIN 1B (SMAD INTERACTING PROTEIN 1) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DA7 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-DEC-05. REMARK 100 THE DEPOSITION ID IS D_1000025178. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.2MM PROTEIN U-15N,13C; 20MM D REMARK 210 -TRIS-HCL (PH7.0); 100MM NACL; REMARK 210 1MM D-DTT; 0.02% NAN3; 90% H2O, REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.932, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH REMARK 210 THE LOWEST ENERGY, STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 9 -173.95 -69.73 REMARK 500 1 LYS A 14 -28.32 -37.22 REMARK 500 1 SER A 32 -38.25 -36.81 REMARK 500 1 PRO A 68 -175.52 -69.75 REMARK 500 2 PRO A 68 -175.11 -69.75 REMARK 500 3 PRO A 68 2.14 -69.73 REMARK 500 4 PRO A 9 -175.31 -69.78 REMARK 500 5 SER A 32 -37.92 -39.27 REMARK 500 6 PRO A 30 -175.46 -69.83 REMARK 500 8 PRO A 9 -178.22 -69.73 REMARK 500 8 HIS A 16 -38.16 -39.95 REMARK 500 9 ASN A 63 171.71 -52.45 REMARK 500 9 PRO A 68 2.97 -69.77 REMARK 500 10 PRO A 68 85.78 -69.73 REMARK 500 12 LYS A 14 -34.69 -33.32 REMARK 500 13 PRO A 30 -179.79 -69.81 REMARK 500 13 GLN A 46 -38.37 -37.86 REMARK 500 14 PRO A 9 -178.24 -69.68 REMARK 500 14 SER A 32 -39.55 -36.95 REMARK 500 14 PRO A 68 88.25 -69.78 REMARK 500 15 PRO A 68 85.50 -69.76 REMARK 500 16 SER A 6 174.99 -55.61 REMARK 500 16 PRO A 9 -173.05 -69.80 REMARK 500 16 PRO A 30 -175.34 -69.76 REMARK 500 17 GLN A 46 -35.68 -39.95 REMARK 500 18 PRO A 9 -179.18 -69.84 REMARK 500 18 GLN A 46 -35.39 -35.18 REMARK 500 19 PRO A 9 -178.89 -69.76 REMARK 500 19 HIS A 16 -34.08 -37.67 REMARK 500 REMARK 500 REMARK: NULL DBREF 2DA7 A 8 65 UNP O60315 SIP1_HUMAN 647 704 SEQADV 2DA7 GLY A 1 UNP O60315 CLONING ARTIFACT SEQADV 2DA7 SER A 2 UNP O60315 CLONING ARTIFACT SEQADV 2DA7 SER A 3 UNP O60315 CLONING ARTIFACT SEQADV 2DA7 GLY A 4 UNP O60315 CLONING ARTIFACT SEQADV 2DA7 SER A 5 UNP O60315 CLONING ARTIFACT SEQADV 2DA7 SER A 6 UNP O60315 CLONING ARTIFACT SEQADV 2DA7 GLY A 7 UNP O60315 CLONING ARTIFACT SEQADV 2DA7 SER A 66 UNP O60315 CLONING ARTIFACT SEQADV 2DA7 GLY A 67 UNP O60315 CLONING ARTIFACT SEQADV 2DA7 PRO A 68 UNP O60315 CLONING ARTIFACT SEQADV 2DA7 SER A 69 UNP O60315 CLONING ARTIFACT SEQADV 2DA7 SER A 70 UNP O60315 CLONING ARTIFACT SEQADV 2DA7 GLY A 71 UNP O60315 CLONING ARTIFACT SEQRES 1 A 71 GLY SER SER GLY SER SER GLY SER PRO ILE ASN PRO TYR SEQRES 2 A 71 LYS ASP HIS MET SER VAL LEU LYS ALA TYR TYR ALA MET SEQRES 3 A 71 ASN MET GLU PRO ASN SER ASP GLU LEU LEU LYS ILE SER SEQRES 4 A 71 ILE ALA VAL GLY LEU PRO GLN GLU PHE VAL LYS GLU TRP SEQRES 5 A 71 PHE GLU GLN ARG LYS VAL TYR GLN TYR SER ASN SER ARG SEQRES 6 A 71 SER GLY PRO SER SER GLY HELIX 1 1 LYS A 14 ASN A 27 1 14 HELIX 2 2 ASN A 31 GLY A 43 1 13 HELIX 3 3 PRO A 45 SER A 62 1 18 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1