data_2DBD # _entry.id 2DBD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DBD pdb_00002dbd 10.2210/pdb2dbd/pdb RCSB RCSB025214 ? ? WWPDB D_1000025214 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DBD _pdbx_database_status.recvd_initial_deposition_date 2005-12-15 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Saito, K.' 1 'Inoue, M.' 2 'Koshiba, S.' 3 'Kigawa, T.' 4 'Yokoyama, S.' 5 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 6 # _citation.id primary _citation.title 'Solution structure of the CARD domain in human caspase recruitment domain protein 4 (Nod1 protein)' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Saito, K.' 1 ? primary 'Inoue, M.' 2 ? primary 'Koshiba, S.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Yokoyama, S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Caspase recruitment domain protein 4' _entity.formula_weight 11874.377 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'CARD domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CARD4, Nod1 protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGHPHIQLLKSNRELLVTHIRNTQCLVDNLLKNDYFSAEDAEIVCACPTQPDKVRKILDLVQSKGEEVSEFFLYL LQQLADAYVDLRPWLLEIGFSSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGHPHIQLLKSNRELLVTHIRNTQCLVDNLLKNDYFSAEDAEIVCACPTQPDKVRKILDLVQSKGEEVSEFFLYL LQQLADAYVDLRPWLLEIGFSSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 HIS n 1 9 PRO n 1 10 HIS n 1 11 ILE n 1 12 GLN n 1 13 LEU n 1 14 LEU n 1 15 LYS n 1 16 SER n 1 17 ASN n 1 18 ARG n 1 19 GLU n 1 20 LEU n 1 21 LEU n 1 22 VAL n 1 23 THR n 1 24 HIS n 1 25 ILE n 1 26 ARG n 1 27 ASN n 1 28 THR n 1 29 GLN n 1 30 CYS n 1 31 LEU n 1 32 VAL n 1 33 ASP n 1 34 ASN n 1 35 LEU n 1 36 LEU n 1 37 LYS n 1 38 ASN n 1 39 ASP n 1 40 TYR n 1 41 PHE n 1 42 SER n 1 43 ALA n 1 44 GLU n 1 45 ASP n 1 46 ALA n 1 47 GLU n 1 48 ILE n 1 49 VAL n 1 50 CYS n 1 51 ALA n 1 52 CYS n 1 53 PRO n 1 54 THR n 1 55 GLN n 1 56 PRO n 1 57 ASP n 1 58 LYS n 1 59 VAL n 1 60 ARG n 1 61 LYS n 1 62 ILE n 1 63 LEU n 1 64 ASP n 1 65 LEU n 1 66 VAL n 1 67 GLN n 1 68 SER n 1 69 LYS n 1 70 GLY n 1 71 GLU n 1 72 GLU n 1 73 VAL n 1 74 SER n 1 75 GLU n 1 76 PHE n 1 77 PHE n 1 78 LEU n 1 79 TYR n 1 80 LEU n 1 81 LEU n 1 82 GLN n 1 83 GLN n 1 84 LEU n 1 85 ALA n 1 86 ASP n 1 87 ALA n 1 88 TYR n 1 89 VAL n 1 90 ASP n 1 91 LEU n 1 92 ARG n 1 93 PRO n 1 94 TRP n 1 95 LEU n 1 96 LEU n 1 97 GLU n 1 98 ILE n 1 99 GLY n 1 100 PHE n 1 101 SER n 1 102 SER n 1 103 GLY n 1 104 PRO n 1 105 SER n 1 106 SER n 1 107 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene BC1621_H11 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050613-13 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CARD4_HUMAN _struct_ref.pdbx_db_accession Q9Y239 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;HPHIQLLKSNRELLVTHIRNTQCLVDNLLKNDYFSAEDAEIVCACPTQPDKVRKILDLVQSKGEEVSEFFLYLLQQLADA YVDLRPWLLEIGFS ; _struct_ref.pdbx_align_begin 17 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2DBD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 101 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9Y239 _struct_ref_seq.db_align_beg 17 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 110 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 101 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2DBD GLY A 1 ? UNP Q9Y239 ? ? 'cloning artifact' 1 1 1 2DBD SER A 2 ? UNP Q9Y239 ? ? 'cloning artifact' 2 2 1 2DBD SER A 3 ? UNP Q9Y239 ? ? 'cloning artifact' 3 3 1 2DBD GLY A 4 ? UNP Q9Y239 ? ? 'cloning artifact' 4 4 1 2DBD SER A 5 ? UNP Q9Y239 ? ? 'cloning artifact' 5 5 1 2DBD SER A 6 ? UNP Q9Y239 ? ? 'cloning artifact' 6 6 1 2DBD GLY A 7 ? UNP Q9Y239 ? ? 'cloning artifact' 7 7 1 2DBD SER A 102 ? UNP Q9Y239 ? ? 'cloning artifact' 102 8 1 2DBD GLY A 103 ? UNP Q9Y239 ? ? 'cloning artifact' 103 9 1 2DBD PRO A 104 ? UNP Q9Y239 ? ? 'cloning artifact' 104 10 1 2DBD SER A 105 ? UNP Q9Y239 ? ? 'cloning artifact' 105 11 1 2DBD SER A 106 ? UNP Q9Y239 ? ? 'cloning artifact' 106 12 1 2DBD GLY A 107 ? UNP Q9Y239 ? ? 'cloning artifact' 107 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents ;1mM protein, 20mM d-tris-HCl, pH7.0, 100mM NaCl, 1mM d-DTT, 0.02% NaN3, 90% H2O, 10% D2O ; _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2DBD _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2DBD _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2DBD _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 2.8 Bruker 1 processing NMRPipe 2002 'Delaglio F.' 2 'data analysis' NMRView 5 'Johnson B.A.' 3 'structure solution' CNS 1.1 'Brunger A.T.' 4 refinement CNS 1.1 ? 5 # _exptl.entry_id 2DBD _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2DBD _struct.title 'Solution structure of the CARD domain in human caspase recruitment domain protein 4 (Nod1 protein)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DBD _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text ;Apoptosis, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, SIGNALING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 10 ? ASN A 17 ? HIS A 10 ASN A 17 1 ? 8 HELX_P HELX_P2 2 ASN A 17 ? ILE A 25 ? ASN A 17 ILE A 25 1 ? 9 HELX_P HELX_P3 3 THR A 28 ? ASN A 38 ? THR A 28 ASN A 38 1 ? 11 HELX_P HELX_P4 4 SER A 42 ? CYS A 52 ? SER A 42 CYS A 52 1 ? 11 HELX_P HELX_P5 5 THR A 54 ? GLY A 70 ? THR A 54 GLY A 70 1 ? 17 HELX_P HELX_P6 6 GLY A 70 ? ASP A 86 ? GLY A 70 ASP A 86 1 ? 17 HELX_P HELX_P7 7 ARG A 92 ? GLY A 99 ? ARG A 92 GLY A 99 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 2DBD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2DBD _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 HIS 8 8 8 HIS HIS A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 HIS 10 10 10 HIS HIS A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 THR 23 23 23 THR THR A . n A 1 24 HIS 24 24 24 HIS HIS A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 GLN 29 29 29 GLN GLN A . n A 1 30 CYS 30 30 30 CYS CYS A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 ASN 34 34 34 ASN ASN A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 TYR 40 40 40 TYR TYR A . n A 1 41 PHE 41 41 41 PHE PHE A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 CYS 50 50 50 CYS CYS A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 CYS 52 52 52 CYS CYS A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 GLN 67 67 67 GLN GLN A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 SER 74 74 74 SER SER A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 PHE 77 77 77 PHE PHE A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 TYR 79 79 79 TYR TYR A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 GLN 83 83 83 GLN GLN A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 ASP 86 86 86 ASP ASP A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 TYR 88 88 88 TYR TYR A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 ARG 92 92 92 ARG ARG A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 TRP 94 94 94 TRP TRP A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 SER 105 105 105 SER SER A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 GLY 107 107 107 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-12-19 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 8 ? ? 60.57 77.72 2 1 ARG A 26 ? ? -130.93 -46.46 3 1 ARG A 92 ? ? -179.36 -61.42 4 1 PRO A 104 ? ? -53.48 -174.26 5 2 SER A 5 ? ? 58.77 174.05 6 2 ASN A 17 ? ? -103.53 45.31 7 2 LYS A 69 ? ? -60.75 -75.18 8 2 TYR A 88 ? ? -62.54 -177.82 9 2 VAL A 89 ? ? -145.15 -46.86 10 2 ARG A 92 ? ? 179.90 -60.90 11 3 SER A 6 ? ? 60.25 103.33 12 3 HIS A 8 ? ? 60.13 77.47 13 3 ASN A 17 ? ? -105.40 40.30 14 3 ASP A 39 ? ? 64.19 61.01 15 3 LEU A 91 ? ? -96.37 31.31 16 4 ARG A 92 ? ? 179.26 -60.19 17 4 PHE A 100 ? ? -64.87 99.72 18 4 SER A 101 ? ? 68.59 -67.84 19 4 SER A 106 ? ? -166.36 116.54 20 5 SER A 2 ? ? -172.11 -55.86 21 5 SER A 3 ? ? -145.63 -47.77 22 5 SER A 5 ? ? -141.76 -47.18 23 5 ARG A 26 ? ? -143.17 -47.66 24 5 ASP A 90 ? ? -131.85 -44.74 25 5 ARG A 92 ? ? 176.79 -57.99 26 6 SER A 3 ? ? 60.55 167.28 27 6 ASN A 17 ? ? -97.84 37.28 28 6 ARG A 92 ? ? -178.20 -61.36 29 6 SER A 102 ? ? -98.18 32.17 30 7 ASN A 17 ? ? -114.28 54.62 31 7 ASP A 90 ? ? -135.15 -46.27 32 7 ARG A 92 ? ? -179.49 -52.56 33 8 SER A 2 ? ? -150.14 -56.82 34 8 ASN A 17 ? ? -100.14 42.86 35 8 VAL A 89 ? ? -132.18 -46.97 36 8 ARG A 92 ? ? -179.20 -61.36 37 8 SER A 101 ? ? -131.74 -62.09 38 9 SER A 2 ? ? -172.84 36.02 39 9 SER A 5 ? ? -102.45 61.53 40 9 ASP A 39 ? ? 65.98 71.14 41 9 TYR A 40 ? ? -132.34 -48.20 42 9 ARG A 92 ? ? 179.22 -58.81 43 9 PHE A 100 ? ? -98.46 34.61 44 10 SER A 3 ? ? 60.31 176.79 45 10 SER A 5 ? ? -158.61 35.15 46 10 SER A 6 ? ? -138.25 -56.76 47 10 ARG A 92 ? ? -179.41 -52.10 48 10 SER A 106 ? ? -97.69 37.13 49 11 SER A 3 ? ? 60.49 -177.26 50 11 SER A 6 ? ? -155.77 88.15 51 11 SER A 42 ? ? -68.84 -176.55 52 11 VAL A 89 ? ? -141.58 36.06 53 11 ASP A 90 ? ? -144.94 -43.11 54 11 SER A 105 ? ? -166.01 -43.95 55 11 SER A 106 ? ? 65.86 -76.60 56 12 SER A 2 ? ? -155.88 -57.22 57 12 ASN A 17 ? ? -97.64 45.05 58 12 ASP A 90 ? ? -133.74 -45.49 59 12 ARG A 92 ? ? 176.62 -58.35 60 12 SER A 101 ? ? -176.55 -69.27 61 13 ASN A 17 ? ? -117.59 57.56 62 13 LYS A 69 ? ? -65.75 -75.11 63 13 ASP A 90 ? ? -153.84 -50.65 64 13 ARG A 92 ? ? -179.41 -52.78 65 13 SER A 102 ? ? -153.54 32.24 66 13 PRO A 104 ? ? -53.85 98.25 67 14 SER A 6 ? ? -136.28 -46.93 68 14 ASN A 17 ? ? -95.36 43.84 69 14 ARG A 92 ? ? -177.81 -53.35 70 14 SER A 106 ? ? -172.08 125.59 71 15 SER A 2 ? ? -176.50 -47.28 72 15 SER A 3 ? ? -172.73 99.15 73 15 SER A 5 ? ? -167.23 -50.72 74 15 LYS A 69 ? ? -64.76 -70.42 75 15 ARG A 92 ? ? -179.79 -61.09 76 15 SER A 102 ? ? 63.74 134.46 77 15 SER A 105 ? ? -163.46 113.79 78 16 HIS A 8 ? ? 60.74 111.31 79 16 ASN A 17 ? ? -93.18 48.58 80 16 LYS A 69 ? ? -66.42 -70.34 81 16 ARG A 92 ? ? -179.77 -60.88 82 16 SER A 105 ? ? 55.69 97.96 83 17 SER A 3 ? ? 60.60 97.02 84 17 HIS A 8 ? ? -56.19 107.49 85 17 ASN A 17 ? ? -102.67 51.86 86 17 ARG A 26 ? ? -136.60 -47.22 87 17 ASP A 90 ? ? -145.60 -48.08 88 17 ARG A 92 ? ? -177.56 -53.23 89 17 SER A 101 ? ? 60.33 95.07 90 17 SER A 102 ? ? -176.60 147.05 91 17 PRO A 104 ? ? -70.04 -168.78 92 17 SER A 105 ? ? 60.33 96.44 93 18 SER A 5 ? ? -164.98 -44.14 94 18 SER A 6 ? ? -142.12 -47.33 95 18 HIS A 8 ? ? 59.98 89.35 96 18 LYS A 69 ? ? -60.04 -70.37 97 18 ASP A 90 ? ? -129.25 -57.52 98 18 ARG A 92 ? ? -168.28 -56.21 99 18 PHE A 100 ? ? -95.11 43.61 100 19 SER A 5 ? ? 60.72 165.66 101 19 SER A 6 ? ? -172.09 -178.23 102 19 HIS A 8 ? ? -150.85 79.08 103 19 LYS A 69 ? ? -60.27 -70.28 104 20 ASN A 17 ? ? -97.54 38.76 105 20 ARG A 26 ? ? -121.31 -54.65 106 20 TYR A 40 ? ? -99.17 -60.20 107 20 LYS A 69 ? ? -60.49 -75.11 108 20 ARG A 92 ? ? -177.28 -53.06 109 20 PHE A 100 ? ? -98.15 35.44 110 20 SER A 105 ? ? -171.20 -42.24 #