data_2DBE
# 
_entry.id   2DBE 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.387 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   2DBE         pdb_00002dbe 10.2210/pdb2dbe/pdb 
RCSB  GDL009       ?            ?                   
WWPDB D_1000177986 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 1991-07-15 
2 'Structure model' 1 1 2008-05-22 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2024-02-14 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Data collection'           
4 4 'Structure model' 'Database references'       
5 4 'Structure model' 'Derived calculations'      
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 4 'Structure model' chem_comp_atom 
2 4 'Structure model' chem_comp_bond 
3 4 'Structure model' database_2     
4 4 'Structure model' struct_site    
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1 4 'Structure model' '_database_2.pdbx_DOI'                
2 4 'Structure model' '_database_2.pdbx_database_accession' 
3 4 'Structure model' '_struct_site.pdbx_auth_asym_id'      
4 4 'Structure model' '_struct_site.pdbx_auth_comp_id'      
5 4 'Structure model' '_struct_site.pdbx_auth_seq_id'       
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        2DBE 
_pdbx_database_status.recvd_initial_deposition_date   1990-03-19 
_pdbx_database_status.deposit_site                    BNL 
_pdbx_database_status.process_site                    BNL 
_pdbx_database_status.SG_entry                        . 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.status_code_sf                  ? 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Brown, D.G.'     1 
'Sanderson, M.R.' 2 
'Skelly, J.V.'    3 
'Jenkins, T.C.'   4 
'Brown, T.'       5 
'Garman, E.'      6 
'Stuart, D.I.'    7 
'Neidle, S.'      8 
# 
_citation.id                        primary 
_citation.title                     
'Crystal structure of a berenil-dodecanucleotide complex: the role of water in sequence-specific ligand binding.' 
_citation.journal_abbrev            'EMBO J.' 
_citation.journal_volume            9 
_citation.page_first                1329 
_citation.page_last                 1334 
_citation.year                      1990 
_citation.journal_id_ASTM           EMJODG 
_citation.country                   UK 
_citation.journal_id_ISSN           0261-4189 
_citation.journal_id_CSD            0897 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   2323343 
_citation.pdbx_database_id_DOI      ? 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Brown, D.G.'     1 ? 
primary 'Sanderson, M.R.' 2 ? 
primary 'Skelly, J.V.'    3 ? 
primary 'Jenkins, T.C.'   4 ? 
primary 'Brown, T.'       5 ? 
primary 'Garman, E.'      6 ? 
primary 'Stuart, D.I.'    7 ? 
primary 'Neidle, S.'      8 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn 
;DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
;
3663.392 2  ? ? ? ? 
2 non-polymer syn BERENIL                                              281.316  1  ? ? ? ? 
3 water       nat water                                                18.015   48 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   no 
_entity_poly.pdbx_seq_one_letter_code       '(DC)(DG)(DC)(DG)(DA)(DA)(DT)(DT)(DC)(DG)(DC)(DG)' 
_entity_poly.pdbx_seq_one_letter_code_can   CGCGAATTCGCG 
_entity_poly.pdbx_strand_id                 A,B 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
2 BERENIL BRN 
3 water   HOH 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DC n 
1 2  DG n 
1 3  DC n 
1 4  DG n 
1 5  DA n 
1 6  DA n 
1 7  DT n 
1 8  DT n 
1 9  DC n 
1 10 DG n 
1 11 DC n 
1 12 DG n 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
BRN non-polymer   . BERENIL                              
;DIMINAZINE ACETURATE; 1,3-TRIS-(4'AMIDINOPHENYL)TRIAZINE
;
'C14 H15 N7'      281.316 
DA  'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ?                                                          
'C10 H14 N5 O6 P' 331.222 
DC  'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"  ?                                                          
'C9 H14 N3 O7 P'  307.197 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ?                                                          
'C10 H14 N5 O7 P' 347.221 
DT  'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE"         ?                                                          
'C10 H15 N2 O8 P' 322.208 
HOH non-polymer   . WATER                                ?                                                          'H2 O' 18.015  
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DC 1  1  1  DC C A . n 
A 1 2  DG 2  2  2  DG G A . n 
A 1 3  DC 3  3  3  DC C A . n 
A 1 4  DG 4  4  4  DG G A . n 
A 1 5  DA 5  5  5  DA A A . n 
A 1 6  DA 6  6  6  DA A A . n 
A 1 7  DT 7  7  7  DT T A . n 
A 1 8  DT 8  8  8  DT T A . n 
A 1 9  DC 9  9  9  DC C A . n 
A 1 10 DG 10 10 10 DG G A . n 
A 1 11 DC 11 11 11 DC C A . n 
A 1 12 DG 12 12 12 DG G A . n 
B 1 1  DC 1  13 13 DC C B . n 
B 1 2  DG 2  14 14 DG G B . n 
B 1 3  DC 3  15 15 DC C B . n 
B 1 4  DG 4  16 16 DG G B . n 
B 1 5  DA 5  17 17 DA A B . n 
B 1 6  DA 6  18 18 DA A B . n 
B 1 7  DT 7  19 19 DT T B . n 
B 1 8  DT 8  20 20 DT T B . n 
B 1 9  DC 9  21 21 DC C B . n 
B 1 10 DG 10 22 22 DG G B . n 
B 1 11 DC 11 23 23 DC C B . n 
B 1 12 DG 12 24 24 DG G B . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
C 2 BRN 1  25 25 BRN BRN A . 
D 3 HOH 1  26 26 HOH HOH A . 
D 3 HOH 2  28 28 HOH HOH A . 
D 3 HOH 3  29 29 HOH HOH A . 
D 3 HOH 4  36 36 HOH HOH A . 
D 3 HOH 5  43 43 HOH HOH A . 
D 3 HOH 6  44 44 HOH HOH A . 
D 3 HOH 7  47 47 HOH HOH A . 
D 3 HOH 8  49 49 HOH HOH A . 
D 3 HOH 9  50 50 HOH HOH A . 
D 3 HOH 10 51 51 HOH HOH A . 
D 3 HOH 11 52 52 HOH HOH A . 
D 3 HOH 12 53 53 HOH HOH A . 
D 3 HOH 13 56 56 HOH HOH A . 
D 3 HOH 14 57 57 HOH HOH A . 
D 3 HOH 15 58 58 HOH HOH A . 
D 3 HOH 16 59 59 HOH HOH A . 
D 3 HOH 17 60 60 HOH HOH A . 
D 3 HOH 18 61 61 HOH HOH A . 
D 3 HOH 19 63 63 HOH HOH A . 
D 3 HOH 20 65 65 HOH HOH A . 
D 3 HOH 21 66 66 HOH HOH A . 
D 3 HOH 22 67 67 HOH HOH A . 
D 3 HOH 23 68 68 HOH HOH A . 
D 3 HOH 24 69 69 HOH HOH A . 
D 3 HOH 25 70 70 HOH HOH A . 
D 3 HOH 26 71 71 HOH HOH A . 
D 3 HOH 27 72 72 HOH HOH A . 
D 3 HOH 28 73 73 HOH HOH A . 
E 3 HOH 1  27 27 HOH HOH B . 
E 3 HOH 2  30 30 HOH HOH B . 
E 3 HOH 3  31 31 HOH HOH B . 
E 3 HOH 4  32 32 HOH HOH B . 
E 3 HOH 5  33 33 HOH HOH B . 
E 3 HOH 6  34 34 HOH HOH B . 
E 3 HOH 7  35 35 HOH HOH B . 
E 3 HOH 8  37 37 HOH HOH B . 
E 3 HOH 9  38 38 HOH HOH B . 
E 3 HOH 10 39 39 HOH HOH B . 
E 3 HOH 11 40 40 HOH HOH B . 
E 3 HOH 12 41 41 HOH HOH B . 
E 3 HOH 13 42 42 HOH HOH B . 
E 3 HOH 14 45 45 HOH HOH B . 
E 3 HOH 15 46 46 HOH HOH B . 
E 3 HOH 16 48 48 HOH HOH B . 
E 3 HOH 17 54 54 HOH HOH B . 
E 3 HOH 18 55 55 HOH HOH B . 
E 3 HOH 19 62 62 HOH HOH B . 
E 3 HOH 20 64 64 HOH HOH B . 
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
CORELS refinement . ? 1 
NUCLSQ refinement . ? 2 
# 
_cell.entry_id           2DBE 
_cell.length_a           24.510 
_cell.length_b           39.980 
_cell.length_c           66.230 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        90.00 
_cell.Z_PDB              8 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         2DBE 
_symmetry.space_group_name_H-M             'P 21 21 21' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                19 
# 
_exptl.entry_id          2DBE 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   ? 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      2.21 
_exptl_crystal.density_percent_sol   44.46 
_exptl_crystal.description           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION' 
_exptl_crystal_grow.temp            278.00 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              7.00 
_exptl_crystal_grow.pdbx_details    'pH 7.00, VAPOR DIFFUSION, temperature 278.00K' 
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
loop_
_exptl_crystal_grow_comp.crystal_id 
_exptl_crystal_grow_comp.id 
_exptl_crystal_grow_comp.sol_id 
_exptl_crystal_grow_comp.name 
_exptl_crystal_grow_comp.volume 
_exptl_crystal_grow_comp.conc 
_exptl_crystal_grow_comp.details 
1 1 1 WATER           ? ? ? 
1 2 1 MPD             ? ? ? 
1 3 1 'NA CACODYLATE' ? ? ? 
1 4 1 MGCL2           ? ? ? 
1 5 2 WATER           ? ? ? 
1 6 2 MPD             ? ? ? 
# 
_diffrn.id                     1 
_diffrn.crystal_id             1 
_diffrn.ambient_temp           ? 
_diffrn.ambient_temp_details   ? 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               'AREA DETECTOR' 
_diffrn_detector.type                   XENTRONICS 
_diffrn_detector.pdbx_collection_date   ? 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   ? 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.pdbx_diffrn_protocol             ? 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   . 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      'ROTATING ANODE' 
_diffrn_source.type                        'RIGAKU RU200' 
_diffrn_source.pdbx_synchrotron_site       ? 
_diffrn_source.pdbx_synchrotron_beamline   ? 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        ? 
# 
_reflns.entry_id                     2DBE 
_reflns.observed_criterion_sigma_I   ? 
_reflns.observed_criterion_sigma_F   2.000 
_reflns.d_resolution_low             ? 
_reflns.d_resolution_high            2.500 
_reflns.number_obs                   1759 
_reflns.number_all                   2195 
_reflns.percent_possible_obs         ? 
_reflns.pdbx_Rmerge_I_obs            0.0370000 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        ? 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              ? 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
# 
_refine.entry_id                                 2DBE 
_refine.ls_number_reflns_obs                     1759 
_refine.ls_number_reflns_all                     ? 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          2.000 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             ? 
_refine.ls_d_res_high                            2.500 
_refine.ls_percent_reflns_obs                    ? 
_refine.ls_R_factor_obs                          0.1670000 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_R_work                       ? 
_refine.ls_R_factor_R_free                       ? 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 ? 
_refine.ls_number_reflns_R_free                  ? 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_ls_cross_valid_method               ? 
_refine.details                                  ? 
_refine.pdbx_starting_model                      ? 
_refine.pdbx_method_to_determine_struct          ? 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       ? 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            ? 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_ML                            ? 
_refine.overall_SU_B                             ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   486 
_refine_hist.pdbx_number_atoms_ligand         21 
_refine_hist.number_atoms_solvent             48 
_refine_hist.number_atoms_total               555 
_refine_hist.d_res_high                       2.500 
_refine_hist.d_res_low                        . 
# 
_database_PDB_matrix.entry_id          2DBE 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_struct.entry_id                  2DBE 
_struct.title                     
'CRYSTAL STRUCTURE OF A BERENIL-DODECANUCLEOTIDE COMPLEX: THE ROLE OF WATER IN SEQUENCE-SPECIFIC LIGAND BINDING' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        2DBE 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            'B-DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, DNA' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
C N N 2 ? 
D N N 3 ? 
E N N 3 ? 
# 
_struct_ref.id                         1 
_struct_ref.entity_id                  1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    2DBE 
_struct_ref.pdbx_db_accession          2DBE 
_struct_ref.pdbx_db_isoform            ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_align_begin           ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 2DBE A 1 ? 12 ? 2DBE 1  ? 12 ? 1  12 
2 1 2DBE B 1 ? 12 ? 2DBE 13 ? 24 ? 13 24 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D,E 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
_struct_biol.id   1 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
hydrog1  hydrog ? ? A DC 1  N3 ? ? ? 1_555 B DG 12 N1 ? ? A DC 1  B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog2  hydrog ? ? A DC 1  N4 ? ? ? 1_555 B DG 12 O6 ? ? A DC 1  B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog3  hydrog ? ? A DC 1  O2 ? ? ? 1_555 B DG 12 N2 ? ? A DC 1  B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog4  hydrog ? ? A DG 2  N1 ? ? ? 1_555 B DC 11 N3 ? ? A DG 2  B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog5  hydrog ? ? A DG 2  N2 ? ? ? 1_555 B DC 11 O2 ? ? A DG 2  B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog6  hydrog ? ? A DG 2  O6 ? ? ? 1_555 B DC 11 N4 ? ? A DG 2  B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog7  hydrog ? ? A DC 3  N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 3  B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog8  hydrog ? ? A DC 3  N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 3  B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog9  hydrog ? ? A DC 3  O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 3  B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog10 hydrog ? ? A DG 4  N1 ? ? ? 1_555 B DC 9  N3 ? ? A DG 4  B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog11 hydrog ? ? A DG 4  N2 ? ? ? 1_555 B DC 9  O2 ? ? A DG 4  B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog12 hydrog ? ? A DG 4  O6 ? ? ? 1_555 B DC 9  N4 ? ? A DG 4  B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog13 hydrog ? ? A DA 5  N1 ? ? ? 1_555 B DT 8  N3 ? ? A DA 5  B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog14 hydrog ? ? A DA 5  N6 ? ? ? 1_555 B DT 8  O4 ? ? A DA 5  B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog15 hydrog ? ? A DA 6  N1 ? ? ? 1_555 B DT 7  N3 ? ? A DA 6  B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog16 hydrog ? ? A DA 6  N6 ? ? ? 1_555 B DT 7  O4 ? ? A DA 6  B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog17 hydrog ? ? A DT 7  N3 ? ? ? 1_555 B DA 6  N1 ? ? A DT 7  B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog18 hydrog ? ? A DT 7  O4 ? ? ? 1_555 B DA 6  N6 ? ? A DT 7  B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog19 hydrog ? ? A DT 8  N3 ? ? ? 1_555 B DA 5  N1 ? ? A DT 8  B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog20 hydrog ? ? A DT 8  O4 ? ? ? 1_555 B DA 5  N6 ? ? A DT 8  B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog21 hydrog ? ? A DC 9  N3 ? ? ? 1_555 B DG 4  N1 ? ? A DC 9  B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog22 hydrog ? ? A DC 9  N4 ? ? ? 1_555 B DG 4  O6 ? ? A DC 9  B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog23 hydrog ? ? A DC 9  O2 ? ? ? 1_555 B DG 4  N2 ? ? A DC 9  B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog24 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 3  N3 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog25 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 3  O2 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog26 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 3  N4 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog27 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 2  N1 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog28 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 2  O6 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog29 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 2  N2 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog30 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 1  N3 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog31 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 1  O2 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog32 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 1  N4 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
# 
_struct_conn_type.id          hydrog 
_struct_conn_type.criteria    ? 
_struct_conn_type.reference   ? 
# 
loop_
_struct_site.id 
_struct_site.pdbx_evidence_code 
_struct_site.pdbx_auth_asym_id 
_struct_site.pdbx_auth_comp_id 
_struct_site.pdbx_auth_seq_id 
_struct_site.pdbx_auth_ins_code 
_struct_site.pdbx_num_residues 
_struct_site.details 
AC1 Software A BRN 25 ? 10 'BINDING SITE FOR RESIDUE BRN A 25' 
1   ?        ? ?   ?  ? ?  ?                                   
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1  AC1 10 DA  A 6 ? DA  A 6  . ? 1_555 ? 
2  AC1 10 DT  A 7 ? DT  A 7  . ? 1_555 ? 
3  AC1 10 DT  A 8 ? DT  A 8  . ? 1_555 ? 
4  AC1 10 DC  A 9 ? DC  A 9  . ? 1_555 ? 
5  AC1 10 HOH D . ? HOH A 43 . ? 1_555 ? 
6  AC1 10 HOH D . ? HOH A 51 . ? 1_555 ? 
7  AC1 10 DA  B 6 ? DA  B 18 . ? 1_555 ? 
8  AC1 10 DT  B 7 ? DT  B 19 . ? 1_555 ? 
9  AC1 10 DT  B 8 ? DT  B 20 . ? 1_555 ? 
10 AC1 10 DC  B 9 ? DC  B 21 . ? 1_555 ? 
# 
_pdbx_validate_close_contact.id               1 
_pdbx_validate_close_contact.PDB_model_num    1 
_pdbx_validate_close_contact.auth_atom_id_1   O6 
_pdbx_validate_close_contact.auth_asym_id_1   B 
_pdbx_validate_close_contact.auth_comp_id_1   DG 
_pdbx_validate_close_contact.auth_seq_id_1    24 
_pdbx_validate_close_contact.PDB_ins_code_1   ? 
_pdbx_validate_close_contact.label_alt_id_1   ? 
_pdbx_validate_close_contact.auth_atom_id_2   O 
_pdbx_validate_close_contact.auth_asym_id_2   B 
_pdbx_validate_close_contact.auth_comp_id_2   HOH 
_pdbx_validate_close_contact.auth_seq_id_2    33 
_pdbx_validate_close_contact.PDB_ins_code_2   ? 
_pdbx_validate_close_contact.label_alt_id_2   ? 
_pdbx_validate_close_contact.dist             1.87 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1  1 "O4'" A DC 1  ? ? "C1'" A DC 1  ? ? N1    A DC 1  ? ? 110.82 108.30 2.52   0.30 N 
2  1 "C3'" A DG 2  ? ? "O3'" A DG 2  ? ? P     A DC 3  ? ? 128.53 119.70 8.83   1.20 Y 
3  1 "O4'" A DC 3  ? ? "C1'" A DC 3  ? ? N1    A DC 3  ? ? 110.84 108.30 2.54   0.30 N 
4  1 C5    A DC 3  ? ? C6    A DC 3  ? ? N1    A DC 3  ? ? 125.81 121.00 4.81   0.50 N 
5  1 "C3'" A DG 4  ? ? "O3'" A DG 4  ? ? P     A DA 5  ? ? 136.04 119.70 16.34  1.20 Y 
6  1 "O4'" A DA 5  ? ? "C1'" A DA 5  ? ? N9    A DA 5  ? ? 111.72 108.30 3.42   0.30 N 
7  1 N1    A DA 5  ? ? C2    A DA 5  ? ? N3    A DA 5  ? ? 125.96 129.30 -3.34  0.50 N 
8  1 C5    A DA 5  ? ? C6    A DA 5  ? ? N1    A DA 5  ? ? 114.59 117.70 -3.11  0.50 N 
9  1 "C3'" A DA 5  ? ? "O3'" A DA 5  ? ? P     A DA 6  ? ? 134.79 119.70 15.09  1.20 Y 
10 1 "O4'" A DA 6  ? ? "C1'" A DA 6  ? ? N9    A DA 6  ? ? 110.64 108.30 2.34   0.30 N 
11 1 C6    A DA 6  ? ? N1    A DA 6  ? ? C2    A DA 6  ? ? 122.60 118.60 4.00   0.60 N 
12 1 N1    A DA 6  ? ? C2    A DA 6  ? ? N3    A DA 6  ? ? 125.28 129.30 -4.02  0.50 N 
13 1 C5    A DA 6  ? ? C6    A DA 6  ? ? N1    A DA 6  ? ? 114.69 117.70 -3.01  0.50 N 
14 1 "C3'" A DA 6  ? ? "O3'" A DA 6  ? ? P     A DT 7  ? ? 127.89 119.70 8.19   1.20 Y 
15 1 "O4'" A DT 7  ? ? "C1'" A DT 7  ? ? N1    A DT 7  ? ? 110.57 108.30 2.27   0.30 N 
16 1 N1    A DT 8  ? ? C2    A DT 8  ? ? N3    A DT 8  ? ? 118.48 114.60 3.88   0.60 N 
17 1 C2    A DT 8  ? ? N3    A DT 8  ? ? C4    A DT 8  ? ? 121.33 127.20 -5.87  0.60 N 
18 1 N3    A DT 8  ? ? C4    A DT 8  ? ? C5    A DT 8  ? ? 119.64 115.20 4.44   0.60 N 
19 1 C5    A DC 9  ? ? C6    A DC 9  ? ? N1    A DC 9  ? ? 124.16 121.00 3.16   0.50 N 
20 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9    A DG 10 ? ? 111.90 108.30 3.60   0.30 N 
21 1 C5    A DG 10 ? ? C6    A DG 10 ? ? O6    A DG 10 ? ? 124.70 128.60 -3.90  0.60 N 
22 1 "C3'" A DG 10 ? ? "O3'" A DG 10 ? ? P     A DC 11 ? ? 130.84 119.70 11.14  1.20 Y 
23 1 N3    A DC 11 ? ? C4    A DC 11 ? ? C5    A DC 11 ? ? 119.26 121.90 -2.64  0.40 N 
24 1 N1    A DC 11 ? ? C2    A DC 11 ? ? O2    A DC 11 ? ? 123.46 118.90 4.56   0.60 N 
25 1 C5    A DG 12 ? ? C6    A DG 12 ? ? N1    A DG 12 ? ? 114.89 111.50 3.39   0.50 N 
26 1 N3    B DC 13 ? ? C4    B DC 13 ? ? C5    B DC 13 ? ? 119.28 121.90 -2.62  0.40 N 
27 1 "C3'" B DC 13 ? ? "O3'" B DC 13 ? ? P     B DG 14 ? ? 137.45 119.70 17.75  1.20 Y 
28 1 OP1   B DG 14 ? ? P     B DG 14 ? ? OP2   B DG 14 ? ? 108.44 119.60 -11.16 1.50 N 
29 1 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9    B DG 14 ? ? 113.62 108.30 5.32   0.30 N 
30 1 "O4'" B DC 15 ? ? "C1'" B DC 15 ? ? N1    B DC 15 ? ? 116.16 108.30 7.86   0.30 N 
31 1 C5    B DC 15 ? ? C6    B DC 15 ? ? N1    B DC 15 ? ? 124.63 121.00 3.63   0.50 N 
32 1 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? N9    B DG 16 ? ? 111.01 108.30 2.71   0.30 N 
33 1 "C3'" B DG 16 ? ? "O3'" B DG 16 ? ? P     B DA 17 ? ? 127.97 119.70 8.27   1.20 Y 
34 1 N1    B DA 17 ? ? C2    B DA 17 ? ? N3    B DA 17 ? ? 126.01 129.30 -3.29  0.50 N 
35 1 "C3'" B DA 17 ? ? "O3'" B DA 17 ? ? P     B DA 18 ? ? 133.11 119.70 13.41  1.20 Y 
36 1 C6    B DA 18 ? ? N1    B DA 18 ? ? C2    B DA 18 ? ? 122.60 118.60 4.00   0.60 N 
37 1 C5    B DA 18 ? ? C6    B DA 18 ? ? N1    B DA 18 ? ? 114.45 117.70 -3.25  0.50 N 
38 1 "C3'" B DA 18 ? ? "O3'" B DA 18 ? ? P     B DT 19 ? ? 131.74 119.70 12.04  1.20 Y 
39 1 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1    B DT 19 ? ? 113.30 108.30 5.00   0.30 N 
40 1 C2    B DT 19 ? ? N3    B DT 19 ? ? C4    B DT 19 ? ? 123.48 127.20 -3.72  0.60 N 
41 1 P     B DT 20 ? ? "O5'" B DT 20 ? ? "C5'" B DT 20 ? ? 106.95 120.90 -13.95 1.60 N 
42 1 C2    B DT 20 ? ? N3    B DT 20 ? ? C4    B DT 20 ? ? 123.48 127.20 -3.72  0.60 N 
43 1 "C3'" B DT 20 ? ? "O3'" B DT 20 ? ? P     B DC 21 ? ? 128.24 119.70 8.54   1.20 Y 
44 1 N3    B DC 21 ? ? C4    B DC 21 ? ? C5    B DC 21 ? ? 118.99 121.90 -2.91  0.40 N 
45 1 C5    B DC 21 ? ? C6    B DC 21 ? ? N1    B DC 21 ? ? 124.16 121.00 3.16   0.50 N 
46 1 N3    B DC 21 ? ? C4    B DC 21 ? ? N4    B DC 21 ? ? 122.32 118.00 4.32   0.70 N 
47 1 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9    B DG 22 ? ? 114.67 108.30 6.37   0.30 N 
48 1 "O5'" B DC 23 ? ? P     B DC 23 ? ? OP2   B DC 23 ? ? 120.89 110.70 10.19  1.20 N 
49 1 "O4'" B DC 23 ? ? "C1'" B DC 23 ? ? N1    B DC 23 ? ? 115.58 108.30 7.28   0.30 N 
50 1 N3    B DC 23 ? ? C4    B DC 23 ? ? N4    B DC 23 ? ? 122.53 118.00 4.53   0.70 N 
51 1 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9    B DG 24 ? ? 116.14 108.30 7.84   0.30 N 
# 
_struct_site_keywords.site_id   1 
_struct_site_keywords.text      'MINOR GROOVE BINDER' 
# 
loop_
_refine_B_iso.class 
_refine_B_iso.details 
_refine_B_iso.treatment 
_refine_B_iso.pdbx_refine_id 
'ALL ATOMS'  TR isotropic 'X-RAY DIFFRACTION' 
'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION' 
# 
loop_
_refine_occupancy.class 
_refine_occupancy.treatment 
_refine_occupancy.pdbx_refine_id 
'ALL ATOMS'  fix 'X-RAY DIFFRACTION' 
'ALL WATERS' fix 'X-RAY DIFFRACTION' 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
BRN C1     C Y N 1   
BRN C2     C Y N 2   
BRN C3     C Y N 3   
BRN C4     C Y N 4   
BRN C5     C Y N 5   
BRN C6     C Y N 6   
BRN C7     C N N 7   
BRN NA     N N N 8   
BRN NB     N N N 9   
BRN N1     N N N 10  
BRN N      N N N 11  
BRN "N1'"  N N N 12  
BRN "C1'"  C Y N 13  
BRN "C2'"  C Y N 14  
BRN "C3'"  C Y N 15  
BRN "C4'"  C Y N 16  
BRN "C5'"  C Y N 17  
BRN "C6'"  C Y N 18  
BRN "C7'"  C N N 19  
BRN "NA'"  N N N 20  
BRN "NB'"  N N N 21  
BRN H2     H N N 22  
BRN H3     H N N 23  
BRN H5     H N N 24  
BRN H6     H N N 25  
BRN HA     H N N 26  
BRN HB1    H N N 27  
BRN HB2    H N N 28  
BRN HN1    H N N 29  
BRN "H2'"  H N N 30  
BRN "H3'"  H N N 31  
BRN "H5'"  H N N 32  
BRN "H6'"  H N N 33  
BRN "HA'"  H N N 34  
BRN "HB'1" H N N 35  
BRN "HB'2" H N N 36  
DA  OP3    O N N 37  
DA  P      P N N 38  
DA  OP1    O N N 39  
DA  OP2    O N N 40  
DA  "O5'"  O N N 41  
DA  "C5'"  C N N 42  
DA  "C4'"  C N R 43  
DA  "O4'"  O N N 44  
DA  "C3'"  C N S 45  
DA  "O3'"  O N N 46  
DA  "C2'"  C N N 47  
DA  "C1'"  C N R 48  
DA  N9     N Y N 49  
DA  C8     C Y N 50  
DA  N7     N Y N 51  
DA  C5     C Y N 52  
DA  C6     C Y N 53  
DA  N6     N N N 54  
DA  N1     N Y N 55  
DA  C2     C Y N 56  
DA  N3     N Y N 57  
DA  C4     C Y N 58  
DA  HOP3   H N N 59  
DA  HOP2   H N N 60  
DA  "H5'"  H N N 61  
DA  "H5''" H N N 62  
DA  "H4'"  H N N 63  
DA  "H3'"  H N N 64  
DA  "HO3'" H N N 65  
DA  "H2'"  H N N 66  
DA  "H2''" H N N 67  
DA  "H1'"  H N N 68  
DA  H8     H N N 69  
DA  H61    H N N 70  
DA  H62    H N N 71  
DA  H2     H N N 72  
DC  OP3    O N N 73  
DC  P      P N N 74  
DC  OP1    O N N 75  
DC  OP2    O N N 76  
DC  "O5'"  O N N 77  
DC  "C5'"  C N N 78  
DC  "C4'"  C N R 79  
DC  "O4'"  O N N 80  
DC  "C3'"  C N S 81  
DC  "O3'"  O N N 82  
DC  "C2'"  C N N 83  
DC  "C1'"  C N R 84  
DC  N1     N N N 85  
DC  C2     C N N 86  
DC  O2     O N N 87  
DC  N3     N N N 88  
DC  C4     C N N 89  
DC  N4     N N N 90  
DC  C5     C N N 91  
DC  C6     C N N 92  
DC  HOP3   H N N 93  
DC  HOP2   H N N 94  
DC  "H5'"  H N N 95  
DC  "H5''" H N N 96  
DC  "H4'"  H N N 97  
DC  "H3'"  H N N 98  
DC  "HO3'" H N N 99  
DC  "H2'"  H N N 100 
DC  "H2''" H N N 101 
DC  "H1'"  H N N 102 
DC  H41    H N N 103 
DC  H42    H N N 104 
DC  H5     H N N 105 
DC  H6     H N N 106 
DG  OP3    O N N 107 
DG  P      P N N 108 
DG  OP1    O N N 109 
DG  OP2    O N N 110 
DG  "O5'"  O N N 111 
DG  "C5'"  C N N 112 
DG  "C4'"  C N R 113 
DG  "O4'"  O N N 114 
DG  "C3'"  C N S 115 
DG  "O3'"  O N N 116 
DG  "C2'"  C N N 117 
DG  "C1'"  C N R 118 
DG  N9     N Y N 119 
DG  C8     C Y N 120 
DG  N7     N Y N 121 
DG  C5     C Y N 122 
DG  C6     C N N 123 
DG  O6     O N N 124 
DG  N1     N N N 125 
DG  C2     C N N 126 
DG  N2     N N N 127 
DG  N3     N N N 128 
DG  C4     C Y N 129 
DG  HOP3   H N N 130 
DG  HOP2   H N N 131 
DG  "H5'"  H N N 132 
DG  "H5''" H N N 133 
DG  "H4'"  H N N 134 
DG  "H3'"  H N N 135 
DG  "HO3'" H N N 136 
DG  "H2'"  H N N 137 
DG  "H2''" H N N 138 
DG  "H1'"  H N N 139 
DG  H8     H N N 140 
DG  H1     H N N 141 
DG  H21    H N N 142 
DG  H22    H N N 143 
DT  OP3    O N N 144 
DT  P      P N N 145 
DT  OP1    O N N 146 
DT  OP2    O N N 147 
DT  "O5'"  O N N 148 
DT  "C5'"  C N N 149 
DT  "C4'"  C N R 150 
DT  "O4'"  O N N 151 
DT  "C3'"  C N S 152 
DT  "O3'"  O N N 153 
DT  "C2'"  C N N 154 
DT  "C1'"  C N R 155 
DT  N1     N N N 156 
DT  C2     C N N 157 
DT  O2     O N N 158 
DT  N3     N N N 159 
DT  C4     C N N 160 
DT  O4     O N N 161 
DT  C5     C N N 162 
DT  C7     C N N 163 
DT  C6     C N N 164 
DT  HOP3   H N N 165 
DT  HOP2   H N N 166 
DT  "H5'"  H N N 167 
DT  "H5''" H N N 168 
DT  "H4'"  H N N 169 
DT  "H3'"  H N N 170 
DT  "HO3'" H N N 171 
DT  "H2'"  H N N 172 
DT  "H2''" H N N 173 
DT  "H1'"  H N N 174 
DT  H3     H N N 175 
DT  H71    H N N 176 
DT  H72    H N N 177 
DT  H73    H N N 178 
DT  H6     H N N 179 
HOH O      O N N 180 
HOH H1     H N N 181 
HOH H2     H N N 182 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
BRN C1    C2     doub Y N 1   
BRN C1    C6     sing Y N 2   
BRN C1    N1     sing N N 3   
BRN C2    C3     sing Y N 4   
BRN C2    H2     sing N N 5   
BRN C3    C4     doub Y N 6   
BRN C3    H3     sing N N 7   
BRN C4    C5     sing Y N 8   
BRN C4    C7     sing N N 9   
BRN C5    C6     doub Y N 10  
BRN C5    H5     sing N N 11  
BRN C6    H6     sing N N 12  
BRN C7    NA     doub N N 13  
BRN C7    NB     sing N N 14  
BRN NA    HA     sing N N 15  
BRN NB    HB1    sing N N 16  
BRN NB    HB2    sing N N 17  
BRN N1    N      sing N N 18  
BRN N1    HN1    sing N N 19  
BRN N     "N1'"  doub N E 20  
BRN "N1'" "C1'"  sing N N 21  
BRN "C1'" "C2'"  doub Y N 22  
BRN "C1'" "C6'"  sing Y N 23  
BRN "C2'" "C3'"  sing Y N 24  
BRN "C2'" "H2'"  sing N N 25  
BRN "C3'" "C4'"  doub Y N 26  
BRN "C3'" "H3'"  sing N N 27  
BRN "C4'" "C5'"  sing Y N 28  
BRN "C4'" "C7'"  sing N N 29  
BRN "C5'" "C6'"  doub Y N 30  
BRN "C5'" "H5'"  sing N N 31  
BRN "C6'" "H6'"  sing N N 32  
BRN "C7'" "NA'"  doub N N 33  
BRN "C7'" "NB'"  sing N N 34  
BRN "NA'" "HA'"  sing N N 35  
BRN "NB'" "HB'1" sing N N 36  
BRN "NB'" "HB'2" sing N N 37  
DA  OP3   P      sing N N 38  
DA  OP3   HOP3   sing N N 39  
DA  P     OP1    doub N N 40  
DA  P     OP2    sing N N 41  
DA  P     "O5'"  sing N N 42  
DA  OP2   HOP2   sing N N 43  
DA  "O5'" "C5'"  sing N N 44  
DA  "C5'" "C4'"  sing N N 45  
DA  "C5'" "H5'"  sing N N 46  
DA  "C5'" "H5''" sing N N 47  
DA  "C4'" "O4'"  sing N N 48  
DA  "C4'" "C3'"  sing N N 49  
DA  "C4'" "H4'"  sing N N 50  
DA  "O4'" "C1'"  sing N N 51  
DA  "C3'" "O3'"  sing N N 52  
DA  "C3'" "C2'"  sing N N 53  
DA  "C3'" "H3'"  sing N N 54  
DA  "O3'" "HO3'" sing N N 55  
DA  "C2'" "C1'"  sing N N 56  
DA  "C2'" "H2'"  sing N N 57  
DA  "C2'" "H2''" sing N N 58  
DA  "C1'" N9     sing N N 59  
DA  "C1'" "H1'"  sing N N 60  
DA  N9    C8     sing Y N 61  
DA  N9    C4     sing Y N 62  
DA  C8    N7     doub Y N 63  
DA  C8    H8     sing N N 64  
DA  N7    C5     sing Y N 65  
DA  C5    C6     sing Y N 66  
DA  C5    C4     doub Y N 67  
DA  C6    N6     sing N N 68  
DA  C6    N1     doub Y N 69  
DA  N6    H61    sing N N 70  
DA  N6    H62    sing N N 71  
DA  N1    C2     sing Y N 72  
DA  C2    N3     doub Y N 73  
DA  C2    H2     sing N N 74  
DA  N3    C4     sing Y N 75  
DC  OP3   P      sing N N 76  
DC  OP3   HOP3   sing N N 77  
DC  P     OP1    doub N N 78  
DC  P     OP2    sing N N 79  
DC  P     "O5'"  sing N N 80  
DC  OP2   HOP2   sing N N 81  
DC  "O5'" "C5'"  sing N N 82  
DC  "C5'" "C4'"  sing N N 83  
DC  "C5'" "H5'"  sing N N 84  
DC  "C5'" "H5''" sing N N 85  
DC  "C4'" "O4'"  sing N N 86  
DC  "C4'" "C3'"  sing N N 87  
DC  "C4'" "H4'"  sing N N 88  
DC  "O4'" "C1'"  sing N N 89  
DC  "C3'" "O3'"  sing N N 90  
DC  "C3'" "C2'"  sing N N 91  
DC  "C3'" "H3'"  sing N N 92  
DC  "O3'" "HO3'" sing N N 93  
DC  "C2'" "C1'"  sing N N 94  
DC  "C2'" "H2'"  sing N N 95  
DC  "C2'" "H2''" sing N N 96  
DC  "C1'" N1     sing N N 97  
DC  "C1'" "H1'"  sing N N 98  
DC  N1    C2     sing N N 99  
DC  N1    C6     sing N N 100 
DC  C2    O2     doub N N 101 
DC  C2    N3     sing N N 102 
DC  N3    C4     doub N N 103 
DC  C4    N4     sing N N 104 
DC  C4    C5     sing N N 105 
DC  N4    H41    sing N N 106 
DC  N4    H42    sing N N 107 
DC  C5    C6     doub N N 108 
DC  C5    H5     sing N N 109 
DC  C6    H6     sing N N 110 
DG  OP3   P      sing N N 111 
DG  OP3   HOP3   sing N N 112 
DG  P     OP1    doub N N 113 
DG  P     OP2    sing N N 114 
DG  P     "O5'"  sing N N 115 
DG  OP2   HOP2   sing N N 116 
DG  "O5'" "C5'"  sing N N 117 
DG  "C5'" "C4'"  sing N N 118 
DG  "C5'" "H5'"  sing N N 119 
DG  "C5'" "H5''" sing N N 120 
DG  "C4'" "O4'"  sing N N 121 
DG  "C4'" "C3'"  sing N N 122 
DG  "C4'" "H4'"  sing N N 123 
DG  "O4'" "C1'"  sing N N 124 
DG  "C3'" "O3'"  sing N N 125 
DG  "C3'" "C2'"  sing N N 126 
DG  "C3'" "H3'"  sing N N 127 
DG  "O3'" "HO3'" sing N N 128 
DG  "C2'" "C1'"  sing N N 129 
DG  "C2'" "H2'"  sing N N 130 
DG  "C2'" "H2''" sing N N 131 
DG  "C1'" N9     sing N N 132 
DG  "C1'" "H1'"  sing N N 133 
DG  N9    C8     sing Y N 134 
DG  N9    C4     sing Y N 135 
DG  C8    N7     doub Y N 136 
DG  C8    H8     sing N N 137 
DG  N7    C5     sing Y N 138 
DG  C5    C6     sing N N 139 
DG  C5    C4     doub Y N 140 
DG  C6    O6     doub N N 141 
DG  C6    N1     sing N N 142 
DG  N1    C2     sing N N 143 
DG  N1    H1     sing N N 144 
DG  C2    N2     sing N N 145 
DG  C2    N3     doub N N 146 
DG  N2    H21    sing N N 147 
DG  N2    H22    sing N N 148 
DG  N3    C4     sing N N 149 
DT  OP3   P      sing N N 150 
DT  OP3   HOP3   sing N N 151 
DT  P     OP1    doub N N 152 
DT  P     OP2    sing N N 153 
DT  P     "O5'"  sing N N 154 
DT  OP2   HOP2   sing N N 155 
DT  "O5'" "C5'"  sing N N 156 
DT  "C5'" "C4'"  sing N N 157 
DT  "C5'" "H5'"  sing N N 158 
DT  "C5'" "H5''" sing N N 159 
DT  "C4'" "O4'"  sing N N 160 
DT  "C4'" "C3'"  sing N N 161 
DT  "C4'" "H4'"  sing N N 162 
DT  "O4'" "C1'"  sing N N 163 
DT  "C3'" "O3'"  sing N N 164 
DT  "C3'" "C2'"  sing N N 165 
DT  "C3'" "H3'"  sing N N 166 
DT  "O3'" "HO3'" sing N N 167 
DT  "C2'" "C1'"  sing N N 168 
DT  "C2'" "H2'"  sing N N 169 
DT  "C2'" "H2''" sing N N 170 
DT  "C1'" N1     sing N N 171 
DT  "C1'" "H1'"  sing N N 172 
DT  N1    C2     sing N N 173 
DT  N1    C6     sing N N 174 
DT  C2    O2     doub N N 175 
DT  C2    N3     sing N N 176 
DT  N3    C4     sing N N 177 
DT  N3    H3     sing N N 178 
DT  C4    O4     doub N N 179 
DT  C4    C5     sing N N 180 
DT  C5    C7     sing N N 181 
DT  C5    C6     doub N N 182 
DT  C7    H71    sing N N 183 
DT  C7    H72    sing N N 184 
DT  C7    H73    sing N N 185 
DT  C6    H6     sing N N 186 
HOH O     H1     sing N N 187 
HOH O     H2     sing N N 188 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
2DBE 'double helix'        
2DBE 'b-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DC 1  1_555 B DG 12 1_555 0.215  -0.184 0.097  0.893  -14.040 -4.933 1  A_DC1:DG24_B  A 1  ? B 24 ? 19 1 
1 A DG 2  1_555 B DC 11 1_555 -0.240 -0.228 0.454  4.321  -11.264 -7.257 2  A_DG2:DC23_B  A 2  ? B 23 ? 19 1 
1 A DC 3  1_555 B DG 10 1_555 -0.093 -0.139 -0.157 -4.226 -0.923  -1.788 3  A_DC3:DG22_B  A 3  ? B 22 ? 19 1 
1 A DG 4  1_555 B DC 9  1_555 -0.193 -0.203 -0.361 8.081  -8.253  -2.270 4  A_DG4:DC21_B  A 4  ? B 21 ? 19 1 
1 A DA 5  1_555 B DT 8  1_555 0.053  -0.086 -0.162 5.761  -15.762 -0.333 5  A_DA5:DT20_B  A 5  ? B 20 ? 20 1 
1 A DA 6  1_555 B DT 7  1_555 -0.055 -0.130 -0.139 0.377  -17.914 -0.617 6  A_DA6:DT19_B  A 6  ? B 19 ? 20 1 
1 A DT 7  1_555 B DA 6  1_555 -0.051 -0.114 -0.032 0.960  -13.323 1.533  7  A_DT7:DA18_B  A 7  ? B 18 ? 20 1 
1 A DT 8  1_555 B DA 5  1_555 0.191  -0.100 -0.052 -3.315 -16.886 -5.636 8  A_DT8:DA17_B  A 8  ? B 17 ? 20 1 
1 A DC 9  1_555 B DG 4  1_555 0.049  -0.152 0.003  -9.307 -11.536 -1.582 9  A_DC9:DG16_B  A 9  ? B 16 ? 19 1 
1 A DG 10 1_555 B DC 3  1_555 0.062  -0.127 0.141  1.038  -3.255  -3.716 10 A_DG10:DC15_B A 10 ? B 15 ? 19 1 
1 A DC 11 1_555 B DG 2  1_555 0.196  -0.284 0.602  -0.768 -22.655 -8.155 11 A_DC11:DG14_B A 11 ? B 14 ? 19 1 
1 A DG 12 1_555 B DC 1  1_555 -0.156 -0.138 0.058  4.072  9.480   -3.419 12 A_DG12:DC13_B A 12 ? B 13 ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DC 1  1_555 B DG 12 1_555 A DG 2  1_555 B DC 11 1_555 -0.240 0.204  3.327 -1.203 4.158   36.457 -0.256 0.214  3.335 6.618   
1.914   36.704 1  AA_DC1DG2:DC23DG24_BB   A 1  ? B 24 ? A 2  ? B 23 ? 
1 A DG 2  1_555 B DC 11 1_555 A DC 3  1_555 B DG 10 1_555 0.729  0.473  3.622 5.196  -0.227  36.942 0.773  -0.368 3.684 -0.356  
-8.151  37.294 2  AA_DG2DC3:DG22DC23_BB   A 2  ? B 23 ? A 3  ? B 22 ? 
1 A DC 3  1_555 B DG 10 1_555 A DG 4  1_555 B DC 9  1_555 -0.350 0.744  3.156 3.346  7.405   29.508 -0.038 1.318  3.186 14.202  
-6.418  30.583 3  AA_DC3DG4:DC21DG22_BB   A 3  ? B 22 ? A 4  ? B 21 ? 
1 A DG 4  1_555 B DC 9  1_555 A DA 5  1_555 B DT 8  1_555 0.178  0.295  3.242 -1.267 5.054   37.368 -0.195 -0.438 3.245 7.842   
1.966   37.717 4  AA_DG4DA5:DT20DC21_BB   A 4  ? B 21 ? A 5  ? B 20 ? 
1 A DA 5  1_555 B DT 8  1_555 A DA 6  1_555 B DT 7  1_555 0.048  -0.345 3.429 -2.441 6.379   34.626 -1.552 -0.456 3.304 10.590  
4.053   35.273 5  AA_DA5DA6:DT19DT20_BB   A 5  ? B 20 ? A 6  ? B 19 ? 
1 A DA 6  1_555 B DT 7  1_555 A DT 7  1_555 B DA 6  1_555 0.232  -0.698 3.322 -0.585 -2.723  32.726 -0.758 -0.513 3.362 -4.821  
1.035   32.841 6  AA_DA6DT7:DA18DT19_BB   A 6  ? B 19 ? A 7  ? B 18 ? 
1 A DT 7  1_555 B DA 6  1_555 A DT 8  1_555 B DA 5  1_555 -0.483 -0.077 3.327 1.412  3.859   35.512 -0.690 0.994  3.280 6.301   
-2.306  35.742 7  AA_DT7DT8:DA17DA18_BB   A 7  ? B 18 ? A 8  ? B 17 ? 
1 A DT 8  1_555 B DA 5  1_555 A DC 9  1_555 B DG 4  1_555 -0.004 0.070  3.415 -0.701 -1.256  40.495 0.247  -0.076 3.411 -1.814  
1.013   40.519 8  AA_DT8DC9:DG16DA17_BB   A 8  ? B 17 ? A 9  ? B 16 ? 
1 A DC 9  1_555 B DG 4  1_555 A DG 10 1_555 B DC 3  1_555 0.313  1.000  3.371 -2.676 3.540   32.456 1.137  -1.036 3.422 6.297   
4.759   32.750 9  AA_DC9DG10:DC15DG16_BB  A 9  ? B 16 ? A 10 ? B 15 ? 
1 A DG 10 1_555 B DC 3  1_555 A DC 11 1_555 B DG 2  1_555 -0.980 0.977  3.597 -5.904 -15.904 40.582 2.930  0.711  3.128 -21.815 
8.099   43.847 10 AA_DG10DC11:DG14DC15_BB A 10 ? B 15 ? A 11 ? B 14 ? 
1 A DC 11 1_555 B DG 2  1_555 A DG 12 1_555 B DC 1  1_555 0.763  0.203  3.461 5.932  -4.744  33.176 1.162  -0.287 3.480 -8.175  
-10.223 34.011 11 AA_DC11DG12:DC13DG14_BB A 11 ? B 14 ? A 12 ? B 13 ? 
# 
_atom_sites.entry_id                    2DBE 
_atom_sites.fract_transf_matrix[1][1]   0.040800 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.025013 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.015099 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C 
N 
O 
P 
# 
loop_