data_2DBG # _entry.id 2DBG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DBG pdb_00002dbg 10.2210/pdb2dbg/pdb RCSB RCSB025216 ? ? WWPDB D_1000025216 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hso003001042.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DBG _pdbx_database_status.recvd_initial_deposition_date 2005-12-15 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Saito, K.' 1 'Inoue, M.' 2 'Koshiba, S.' 3 'Kigawa, T.' 4 'Yokoyama, S.' 5 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 6 # _citation.id primary _citation.title 'Solution structure of the Pyrin (PAAD-DAPIN) domain in human Myeloid cell nuclear differentiation antigen' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Saito, K.' 1 ? primary 'Inoue, M.' 2 ? primary 'Koshiba, S.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Yokoyama, S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Myeloid cell nuclear differentiation antigen' _entity.formula_weight 11510.404 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'PYRIN DOMAIN' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name MNDA # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGMVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVACLDKLIELAKDMP SLKNLVNNLRKEKSKVASGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGMVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVACLDKLIELAKDMP SLKNLVNNLRKEKSKVASGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hso003001042.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 MET n 1 9 VAL n 1 10 ASN n 1 11 GLU n 1 12 TYR n 1 13 LYS n 1 14 LYS n 1 15 ILE n 1 16 LEU n 1 17 LEU n 1 18 LEU n 1 19 LYS n 1 20 GLY n 1 21 PHE n 1 22 GLU n 1 23 LEU n 1 24 MET n 1 25 ASP n 1 26 ASP n 1 27 TYR n 1 28 HIS n 1 29 PHE n 1 30 THR n 1 31 SER n 1 32 ILE n 1 33 LYS n 1 34 SER n 1 35 LEU n 1 36 LEU n 1 37 ALA n 1 38 TYR n 1 39 ASP n 1 40 LEU n 1 41 GLY n 1 42 LEU n 1 43 THR n 1 44 THR n 1 45 LYS n 1 46 MET n 1 47 GLN n 1 48 GLU n 1 49 GLU n 1 50 TYR n 1 51 ASN n 1 52 ARG n 1 53 ILE n 1 54 LYS n 1 55 ILE n 1 56 THR n 1 57 ASP n 1 58 LEU n 1 59 MET n 1 60 GLU n 1 61 LYS n 1 62 LYS n 1 63 PHE n 1 64 GLN n 1 65 GLY n 1 66 VAL n 1 67 ALA n 1 68 CYS n 1 69 LEU n 1 70 ASP n 1 71 LYS n 1 72 LEU n 1 73 ILE n 1 74 GLU n 1 75 LEU n 1 76 ALA n 1 77 LYS n 1 78 ASP n 1 79 MET n 1 80 PRO n 1 81 SER n 1 82 LEU n 1 83 LYS n 1 84 ASN n 1 85 LEU n 1 86 VAL n 1 87 ASN n 1 88 ASN n 1 89 LEU n 1 90 ARG n 1 91 LYS n 1 92 GLU n 1 93 LYS n 1 94 SER n 1 95 LYS n 1 96 VAL n 1 97 ALA n 1 98 SER n 1 99 GLY n 1 100 PRO n 1 101 SER n 1 102 SER n 1 103 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene AB1735_E12 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Cell free synthesis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050613-16 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'CELL-FREE PROTEIN SYNTHESIS' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MNDA_HUMAN _struct_ref.pdbx_db_accession P41218 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2DBG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 97 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P41218 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 90 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 97 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2DBG GLY A 1 ? UNP P41218 ? ? 'cloning artifact' 1 1 1 2DBG SER A 2 ? UNP P41218 ? ? 'cloning artifact' 2 2 1 2DBG SER A 3 ? UNP P41218 ? ? 'cloning artifact' 3 3 1 2DBG GLY A 4 ? UNP P41218 ? ? 'cloning artifact' 4 4 1 2DBG SER A 5 ? UNP P41218 ? ? 'cloning artifact' 5 5 1 2DBG SER A 6 ? UNP P41218 ? ? 'cloning artifact' 6 6 1 2DBG GLY A 7 ? UNP P41218 ? ? 'cloning artifact' 7 7 1 2DBG SER A 98 ? UNP P41218 ? ? 'cloning artifact' 98 8 1 2DBG GLY A 99 ? UNP P41218 ? ? 'cloning artifact' 99 9 1 2DBG PRO A 100 ? UNP P41218 ? ? 'cloning artifact' 100 10 1 2DBG SER A 101 ? UNP P41218 ? ? 'cloning artifact' 101 11 1 2DBG SER A 102 ? UNP P41218 ? ? 'cloning artifact' 102 12 1 2DBG GLY A 103 ? UNP P41218 ? ? 'cloning artifact' 103 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure AMBIENT _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120 _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1mM protein, 20mM d-tris-HCl, pH7.0, 100mM NaCl, 1mM d-DTT, 0.02% NaN3, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2DBG _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2DBG _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2DBG _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 2.6 BRUKER 1 processing NMRPipe 2002 'DELAGLIO, F.' 2 'data analysis' NMRView 5 'JOHNSON, BA' 3 'structure solution' CNS 1.1 'BRUNGER, AT' 4 refinement CNS 1.1 'BRUNGER, AT' 5 # _exptl.entry_id 2DBG _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2DBG _struct.title 'Solution structure of the Pyrin (PAAD-DAPIN) domain in human Myeloid cell nuclear differentiation antigen' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DBG _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text ;INTERFERON INDUCTION, DNA-BINDING, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, IMMUNE SYSTEM ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 10 ? LYS A 19 ? ASN A 10 LYS A 19 1 ? 10 HELX_P HELX_P2 2 ASP A 25 ? GLY A 41 ? ASP A 25 GLY A 41 1 ? 17 HELX_P HELX_P3 3 THR A 43 ? TYR A 50 ? THR A 43 TYR A 50 1 ? 8 HELX_P HELX_P4 4 ASN A 51 ? PHE A 63 ? ASN A 51 PHE A 63 1 ? 13 HELX_P HELX_P5 5 VAL A 66 ? ALA A 76 ? VAL A 66 ALA A 76 1 ? 11 HELX_P HELX_P6 6 MET A 79 ? SER A 81 ? MET A 79 SER A 81 5 ? 3 HELX_P HELX_P7 7 LEU A 82 ? ALA A 97 ? LEU A 82 ALA A 97 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 2DBG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2DBG _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 MET 8 8 8 MET MET A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 TYR 12 12 12 TYR TYR A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 PHE 21 21 21 PHE PHE A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 MET 24 24 24 MET MET A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 TYR 27 27 27 TYR TYR A . n A 1 28 HIS 28 28 28 HIS HIS A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 TYR 38 38 38 TYR TYR A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 MET 46 46 46 MET MET A . n A 1 47 GLN 47 47 47 GLN GLN A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 TYR 50 50 50 TYR TYR A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 MET 59 59 59 MET MET A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 GLN 64 64 64 GLN GLN A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 CYS 68 68 68 CYS CYS A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 MET 79 79 79 MET MET A . n A 1 80 PRO 80 80 80 PRO PRO A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 ARG 90 90 90 ARG ARG A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 LYS 93 93 93 LYS LYS A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 LYS 95 95 95 LYS LYS A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 PRO 100 100 100 PRO PRO A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 GLY 103 103 103 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-06-15 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 10 ? ? 60.77 84.03 2 1 LYS A 19 ? ? -114.03 61.40 3 1 LEU A 82 ? ? -95.91 44.54 4 1 SER A 102 ? ? 60.40 96.50 5 2 SER A 3 ? ? -99.02 37.22 6 2 SER A 5 ? ? -145.78 -54.16 7 2 ASN A 10 ? ? 64.55 150.34 8 2 LYS A 19 ? ? -90.78 50.92 9 2 ALA A 76 ? ? -98.45 31.43 10 2 LEU A 82 ? ? -96.68 32.92 11 2 ALA A 97 ? ? -143.73 33.09 12 2 SER A 102 ? ? 58.70 94.95 13 3 SER A 2 ? ? 60.46 101.16 14 3 MET A 8 ? ? -163.43 31.84 15 3 LYS A 19 ? ? -93.37 47.08 16 3 ALA A 76 ? ? -98.16 32.35 17 3 ASP A 78 ? ? -102.08 40.08 18 3 LEU A 82 ? ? -98.21 30.95 19 3 LYS A 95 ? ? -92.64 45.82 20 3 SER A 98 ? ? -151.19 -46.67 21 4 SER A 3 ? ? 60.43 104.01 22 4 SER A 5 ? ? -123.23 -53.40 23 4 SER A 6 ? ? -132.76 -50.94 24 4 MET A 8 ? ? 60.86 111.45 25 4 LYS A 19 ? ? -101.64 58.94 26 4 ASP A 78 ? ? -98.10 30.96 27 4 LEU A 82 ? ? -98.19 35.08 28 5 SER A 3 ? ? -147.98 -61.99 29 5 SER A 5 ? ? -167.40 34.06 30 5 MET A 8 ? ? -135.02 -60.85 31 5 ALA A 76 ? ? -93.20 50.72 32 5 ASP A 78 ? ? -93.06 48.55 33 5 LYS A 95 ? ? -100.64 53.80 34 5 ALA A 97 ? ? 62.12 120.30 35 6 SER A 2 ? ? -150.40 -46.92 36 6 SER A 5 ? ? -149.67 -54.20 37 6 SER A 6 ? ? -76.61 -74.19 38 6 LYS A 19 ? ? -94.66 55.93 39 6 ASN A 51 ? ? -110.13 -167.16 40 6 ALA A 76 ? ? -98.50 31.35 41 6 ALA A 97 ? ? 61.09 -172.24 42 6 SER A 101 ? ? -110.26 78.52 43 7 SER A 2 ? ? -156.18 -46.28 44 7 SER A 6 ? ? 60.28 168.53 45 7 MET A 8 ? ? -99.07 30.96 46 7 VAL A 9 ? ? -133.04 -66.73 47 7 LYS A 19 ? ? -93.21 55.16 48 7 ASP A 78 ? ? -98.78 30.68 49 7 LEU A 82 ? ? -96.86 40.01 50 7 VAL A 96 ? ? -67.32 74.50 51 7 SER A 98 ? ? 60.64 167.20 52 8 SER A 2 ? ? -161.80 32.02 53 8 VAL A 9 ? ? -130.48 -56.64 54 8 LYS A 19 ? ? -92.29 52.94 55 8 ASP A 39 ? ? -96.67 -63.29 56 8 LEU A 82 ? ? -98.75 32.02 57 8 ALA A 97 ? ? -110.61 -169.51 58 8 SER A 98 ? ? -167.33 35.68 59 9 MET A 8 ? ? -158.31 88.13 60 9 LYS A 19 ? ? -90.25 54.15 61 9 LEU A 82 ? ? -97.15 39.83 62 9 VAL A 96 ? ? -95.56 43.02 63 9 ALA A 97 ? ? -132.31 -45.82 64 10 SER A 6 ? ? -149.07 31.79 65 10 LYS A 19 ? ? -95.45 45.99 66 10 ALA A 76 ? ? -99.17 30.63 67 10 ASP A 78 ? ? -93.93 46.64 68 10 ALA A 97 ? ? 64.37 -79.10 69 10 SER A 101 ? ? 63.57 102.15 70 10 SER A 102 ? ? 60.78 99.92 71 11 SER A 6 ? ? -140.36 -58.22 72 11 ASP A 78 ? ? -98.01 34.85 73 11 VAL A 96 ? ? -97.81 32.59 74 11 SER A 101 ? ? -156.05 -68.46 75 12 SER A 2 ? ? -147.56 -50.71 76 12 SER A 3 ? ? -174.82 -42.74 77 12 ASN A 10 ? ? 62.23 117.83 78 12 LYS A 19 ? ? -92.76 47.46 79 12 LEU A 23 ? ? -107.22 42.25 80 12 ASP A 78 ? ? -99.92 46.45 81 12 LEU A 82 ? ? -98.57 30.65 82 12 ALA A 97 ? ? 62.23 175.21 83 13 VAL A 9 ? ? -174.95 -41.22 84 13 LYS A 19 ? ? -103.38 59.75 85 13 LYS A 95 ? ? -95.33 -69.40 86 13 ALA A 97 ? ? -177.02 -178.10 87 14 SER A 2 ? ? -134.93 -58.84 88 14 VAL A 9 ? ? -157.93 -45.12 89 14 LYS A 19 ? ? -92.97 48.13 90 14 ASP A 78 ? ? -98.27 30.85 91 15 SER A 2 ? ? -140.74 29.91 92 15 SER A 3 ? ? 58.60 91.66 93 15 SER A 5 ? ? -131.56 -51.61 94 15 VAL A 9 ? ? 63.82 138.67 95 15 LYS A 19 ? ? -94.94 48.98 96 15 LEU A 23 ? ? -99.75 34.67 97 15 ASP A 78 ? ? -99.72 32.47 98 15 ALA A 97 ? ? 63.32 125.93 99 16 SER A 2 ? ? -171.84 117.71 100 16 SER A 3 ? ? 60.31 94.65 101 16 MET A 8 ? ? -136.89 -49.17 102 16 LYS A 19 ? ? -107.15 54.75 103 16 ASP A 78 ? ? -93.51 47.82 104 16 LEU A 82 ? ? -99.86 32.98 105 16 VAL A 96 ? ? -96.28 40.53 106 16 ALA A 97 ? ? -170.31 106.89 107 17 SER A 5 ? ? -156.28 35.35 108 17 SER A 6 ? ? 63.63 133.06 109 17 MET A 8 ? ? -99.87 34.88 110 17 LYS A 19 ? ? -94.36 45.76 111 17 ALA A 76 ? ? -98.38 30.99 112 17 ASP A 78 ? ? -97.75 38.17 113 17 LEU A 82 ? ? -95.90 42.25 114 17 VAL A 96 ? ? -67.58 74.38 115 17 PRO A 100 ? ? -52.16 101.22 116 17 SER A 101 ? ? -150.41 -48.65 117 18 MET A 8 ? ? -169.64 103.54 118 18 LYS A 19 ? ? -97.13 50.93 119 18 ASP A 78 ? ? -95.74 43.12 120 18 LEU A 82 ? ? -101.69 42.61 121 18 SER A 101 ? ? 61.46 105.43 122 18 SER A 102 ? ? 61.21 157.71 123 19 SER A 2 ? ? -175.70 -178.41 124 19 SER A 6 ? ? 60.57 158.54 125 19 LYS A 19 ? ? -102.89 59.53 126 19 ASP A 78 ? ? -105.30 55.73 127 19 VAL A 96 ? ? -69.95 68.12 128 19 PRO A 100 ? ? -52.14 95.44 129 19 SER A 102 ? ? -150.51 36.47 130 20 SER A 3 ? ? 60.46 99.80 131 20 VAL A 9 ? ? 57.94 87.23 132 20 ASN A 10 ? ? 59.94 175.12 133 20 LYS A 19 ? ? -109.80 60.42 134 20 LEU A 23 ? ? -109.64 40.40 135 20 PHE A 63 ? ? -118.82 77.76 136 20 ALA A 76 ? ? -98.77 30.74 137 20 ASP A 78 ? ? -99.69 37.15 138 20 LEU A 82 ? ? -98.81 30.88 139 20 VAL A 96 ? ? 67.01 -70.72 140 20 ALA A 97 ? ? 61.06 -176.46 141 20 SER A 98 ? ? -116.66 79.38 #