data_2DGT # _entry.id 2DGT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DGT pdb_00002dgt 10.2210/pdb2dgt/pdb RCSB RCSB025401 ? ? WWPDB D_1000025401 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsi002005506.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DGT _pdbx_database_status.recvd_initial_deposition_date 2006-03-15 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Abe, C.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Terada, T.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the second RNA binding domain in RNA-binding protein 30' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Abe, C.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Terada, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'RNA-binding protein 30' _entity.formula_weight 9958.057 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RNA recognition motif' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RNA-binding motif protein 30, RNA-binding motif protein 4b' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGKASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLST SRLRTASGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGKASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLST SRLRTASGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsi002005506.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 LYS n 1 9 ALA n 1 10 SER n 1 11 THR n 1 12 LYS n 1 13 LEU n 1 14 HIS n 1 15 VAL n 1 16 GLY n 1 17 ASN n 1 18 ILE n 1 19 SER n 1 20 PRO n 1 21 THR n 1 22 CYS n 1 23 THR n 1 24 ASN n 1 25 GLN n 1 26 GLU n 1 27 LEU n 1 28 ARG n 1 29 ALA n 1 30 LYS n 1 31 PHE n 1 32 GLU n 1 33 GLU n 1 34 TYR n 1 35 GLY n 1 36 PRO n 1 37 VAL n 1 38 ILE n 1 39 GLU n 1 40 CYS n 1 41 ASP n 1 42 ILE n 1 43 VAL n 1 44 LYS n 1 45 ASP n 1 46 TYR n 1 47 ALA n 1 48 PHE n 1 49 VAL n 1 50 HIS n 1 51 MET n 1 52 GLU n 1 53 ARG n 1 54 ALA n 1 55 GLU n 1 56 ASP n 1 57 ALA n 1 58 VAL n 1 59 GLU n 1 60 ALA n 1 61 ILE n 1 62 ARG n 1 63 GLY n 1 64 LEU n 1 65 ASP n 1 66 ASN n 1 67 THR n 1 68 GLU n 1 69 PHE n 1 70 GLN n 1 71 GLY n 1 72 LYS n 1 73 ARG n 1 74 MET n 1 75 HIS n 1 76 VAL n 1 77 GLN n 1 78 LEU n 1 79 SER n 1 80 THR n 1 81 SER n 1 82 ARG n 1 83 LEU n 1 84 ARG n 1 85 THR n 1 86 ALA n 1 87 SER n 1 88 GLY n 1 89 PRO n 1 90 SER n 1 91 SER n 1 92 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene RBM30 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Cell free synthesis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P051017-04 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RBM4B_HUMAN _struct_ref.pdbx_db_accession Q9BQ04 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 75 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2DGT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 86 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9BQ04 _struct_ref_seq.db_align_beg 75 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 155 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 75 _struct_ref_seq.pdbx_auth_seq_align_end 153 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2DGT GLY A 1 ? UNP Q9BQ04 ? ? 'cloning artifact' 68 1 1 2DGT SER A 2 ? UNP Q9BQ04 ? ? 'cloning artifact' 69 2 1 2DGT SER A 3 ? UNP Q9BQ04 ? ? 'cloning artifact' 70 3 1 2DGT GLY A 4 ? UNP Q9BQ04 ? ? 'cloning artifact' 71 4 1 2DGT SER A 5 ? UNP Q9BQ04 ? ? 'cloning artifact' 72 5 1 2DGT SER A 6 ? UNP Q9BQ04 ? ? 'cloning artifact' 73 6 1 2DGT GLY A 7 ? UNP Q9BQ04 ? ? 'cloning artifact' 74 7 1 2DGT SER A 87 ? UNP Q9BQ04 ? ? 'cloning artifact' 154 8 1 2DGT GLY A 88 ? UNP Q9BQ04 ? ? 'cloning artifact' 155 9 1 2DGT PRO A 89 ? UNP Q9BQ04 ? ? 'cloning artifact' 156 10 1 2DGT SER A 90 ? UNP Q9BQ04 ? ? 'cloning artifact' 157 11 1 2DGT SER A 91 ? UNP Q9BQ04 ? ? 'cloning artifact' 158 12 1 2DGT GLY A 92 ? UNP Q9BQ04 ? ? 'cloning artifact' 159 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '20mM d-Tris-HCl(pH7.0), 100mM NaCl, 1mM d-DTT, 0.02% NaN3, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2DGT _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2DGT _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the lowest energy, structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2DGT _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20030801 Delaglio,F 2 'data analysis' NMRView 5.0.4 Johnson,B.A 3 'data analysis' KUJIRA 0.932 Kobayashi,N 4 'structure solution' CYANA 2.0 Guntert,P 5 refinement CYANA 2.0 Guntert,P 6 # _exptl.entry_id 2DGT _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2DGT _struct.title 'Solution structure of the second RNA binding domain in RNA-binding protein 30' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DGT _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;RRM domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RNA BINDING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 23 ? GLU A 33 ? THR A 90 GLU A 100 1 ? 11 HELX_P HELX_P2 2 ARG A 53 ? ASP A 65 ? ARG A 120 ASP A 132 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 39 ? ILE A 42 ? GLU A 106 ILE A 109 A 2 TYR A 46 ? MET A 51 ? TYR A 113 MET A 118 A 3 THR A 11 ? GLY A 16 ? THR A 78 GLY A 83 A 4 LYS A 72 ? LEU A 78 ? LYS A 139 LEU A 145 A 5 THR A 67 ? PHE A 69 ? THR A 134 PHE A 136 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 39 ? N GLU A 106 O HIS A 50 ? O HIS A 117 A 2 3 O VAL A 49 ? O VAL A 116 N LEU A 13 ? N LEU A 80 A 3 4 N HIS A 14 ? N HIS A 81 O GLN A 77 ? O GLN A 144 A 4 5 O LYS A 72 ? O LYS A 139 N PHE A 69 ? N PHE A 136 # _database_PDB_matrix.entry_id 2DGT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2DGT _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 68 68 GLY GLY A . n A 1 2 SER 2 69 69 SER SER A . n A 1 3 SER 3 70 70 SER SER A . n A 1 4 GLY 4 71 71 GLY GLY A . n A 1 5 SER 5 72 72 SER SER A . n A 1 6 SER 6 73 73 SER SER A . n A 1 7 GLY 7 74 74 GLY GLY A . n A 1 8 LYS 8 75 75 LYS LYS A . n A 1 9 ALA 9 76 76 ALA ALA A . n A 1 10 SER 10 77 77 SER SER A . n A 1 11 THR 11 78 78 THR THR A . n A 1 12 LYS 12 79 79 LYS LYS A . n A 1 13 LEU 13 80 80 LEU LEU A . n A 1 14 HIS 14 81 81 HIS HIS A . n A 1 15 VAL 15 82 82 VAL VAL A . n A 1 16 GLY 16 83 83 GLY GLY A . n A 1 17 ASN 17 84 84 ASN ASN A . n A 1 18 ILE 18 85 85 ILE ILE A . n A 1 19 SER 19 86 86 SER SER A . n A 1 20 PRO 20 87 87 PRO PRO A . n A 1 21 THR 21 88 88 THR THR A . n A 1 22 CYS 22 89 89 CYS CYS A . n A 1 23 THR 23 90 90 THR THR A . n A 1 24 ASN 24 91 91 ASN ASN A . n A 1 25 GLN 25 92 92 GLN GLN A . n A 1 26 GLU 26 93 93 GLU GLU A . n A 1 27 LEU 27 94 94 LEU LEU A . n A 1 28 ARG 28 95 95 ARG ARG A . n A 1 29 ALA 29 96 96 ALA ALA A . n A 1 30 LYS 30 97 97 LYS LYS A . n A 1 31 PHE 31 98 98 PHE PHE A . n A 1 32 GLU 32 99 99 GLU GLU A . n A 1 33 GLU 33 100 100 GLU GLU A . n A 1 34 TYR 34 101 101 TYR TYR A . n A 1 35 GLY 35 102 102 GLY GLY A . n A 1 36 PRO 36 103 103 PRO PRO A . n A 1 37 VAL 37 104 104 VAL VAL A . n A 1 38 ILE 38 105 105 ILE ILE A . n A 1 39 GLU 39 106 106 GLU GLU A . n A 1 40 CYS 40 107 107 CYS CYS A . n A 1 41 ASP 41 108 108 ASP ASP A . n A 1 42 ILE 42 109 109 ILE ILE A . n A 1 43 VAL 43 110 110 VAL VAL A . n A 1 44 LYS 44 111 111 LYS LYS A . n A 1 45 ASP 45 112 112 ASP ASP A . n A 1 46 TYR 46 113 113 TYR TYR A . n A 1 47 ALA 47 114 114 ALA ALA A . n A 1 48 PHE 48 115 115 PHE PHE A . n A 1 49 VAL 49 116 116 VAL VAL A . n A 1 50 HIS 50 117 117 HIS HIS A . n A 1 51 MET 51 118 118 MET MET A . n A 1 52 GLU 52 119 119 GLU GLU A . n A 1 53 ARG 53 120 120 ARG ARG A . n A 1 54 ALA 54 121 121 ALA ALA A . n A 1 55 GLU 55 122 122 GLU GLU A . n A 1 56 ASP 56 123 123 ASP ASP A . n A 1 57 ALA 57 124 124 ALA ALA A . n A 1 58 VAL 58 125 125 VAL VAL A . n A 1 59 GLU 59 126 126 GLU GLU A . n A 1 60 ALA 60 127 127 ALA ALA A . n A 1 61 ILE 61 128 128 ILE ILE A . n A 1 62 ARG 62 129 129 ARG ARG A . n A 1 63 GLY 63 130 130 GLY GLY A . n A 1 64 LEU 64 131 131 LEU LEU A . n A 1 65 ASP 65 132 132 ASP ASP A . n A 1 66 ASN 66 133 133 ASN ASN A . n A 1 67 THR 67 134 134 THR THR A . n A 1 68 GLU 68 135 135 GLU GLU A . n A 1 69 PHE 69 136 136 PHE PHE A . n A 1 70 GLN 70 137 137 GLN GLN A . n A 1 71 GLY 71 138 138 GLY GLY A . n A 1 72 LYS 72 139 139 LYS LYS A . n A 1 73 ARG 73 140 140 ARG ARG A . n A 1 74 MET 74 141 141 MET MET A . n A 1 75 HIS 75 142 142 HIS HIS A . n A 1 76 VAL 76 143 143 VAL VAL A . n A 1 77 GLN 77 144 144 GLN GLN A . n A 1 78 LEU 78 145 145 LEU LEU A . n A 1 79 SER 79 146 146 SER SER A . n A 1 80 THR 80 147 147 THR THR A . n A 1 81 SER 81 148 148 SER SER A . n A 1 82 ARG 82 149 149 ARG ARG A . n A 1 83 LEU 83 150 150 LEU LEU A . n A 1 84 ARG 84 151 151 ARG ARG A . n A 1 85 THR 85 152 152 THR THR A . n A 1 86 ALA 86 153 153 ALA ALA A . n A 1 87 SER 87 154 154 SER SER A . n A 1 88 GLY 88 155 155 GLY GLY A . n A 1 89 PRO 89 156 156 PRO PRO A . n A 1 90 SER 90 157 157 SER SER A . n A 1 91 SER 91 158 158 SER SER A . n A 1 92 GLY 92 159 159 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-09-15 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 72 ? ? -69.70 98.94 2 1 ALA A 76 ? ? -100.01 -65.69 3 1 PRO A 103 ? ? -69.86 88.97 4 1 ILE A 105 ? ? -99.91 -61.13 5 1 LYS A 111 ? ? -36.27 -75.38 6 1 GLU A 135 ? ? -53.45 99.85 7 1 SER A 158 ? ? -132.22 -44.75 8 2 SER A 69 ? ? 35.38 42.40 9 2 SER A 73 ? ? -100.47 42.29 10 2 SER A 77 ? ? -47.40 175.19 11 2 PRO A 103 ? ? -69.78 90.06 12 2 LYS A 111 ? ? -35.21 -74.97 13 2 GLU A 135 ? ? -53.13 99.67 14 3 SER A 72 ? ? -69.95 83.76 15 3 PRO A 103 ? ? -69.72 85.51 16 3 LYS A 111 ? ? -34.19 -75.31 17 3 GLU A 119 ? ? -92.89 -61.77 18 3 GLU A 135 ? ? -52.42 103.66 19 3 ARG A 151 ? ? -36.29 142.50 20 4 SER A 70 ? ? -125.56 -54.38 21 4 LYS A 75 ? ? -47.82 101.93 22 4 SER A 77 ? ? -59.05 177.73 23 4 PRO A 103 ? ? -69.70 92.55 24 4 LYS A 111 ? ? -33.74 -75.12 25 4 GLU A 135 ? ? -50.12 102.47 26 4 PRO A 156 ? ? -69.72 85.24 27 5 SER A 73 ? ? -58.42 175.11 28 5 PRO A 103 ? ? -69.80 83.38 29 5 LYS A 111 ? ? -35.87 -71.07 30 5 GLU A 119 ? ? -92.02 -61.03 31 5 GLU A 135 ? ? -54.83 102.22 32 5 SER A 154 ? ? -39.74 136.18 33 6 SER A 70 ? ? -167.22 117.18 34 6 SER A 77 ? ? -170.29 -177.18 35 6 PRO A 103 ? ? -69.81 80.99 36 6 VAL A 104 ? ? -46.79 152.31 37 6 LYS A 111 ? ? -34.08 -75.20 38 6 ARG A 129 ? ? -49.66 -18.34 39 6 SER A 146 ? ? -97.66 42.78 40 6 ARG A 151 ? ? -40.30 153.63 41 6 SER A 154 ? ? -57.07 104.03 42 7 SER A 73 ? ? -82.44 44.59 43 7 SER A 77 ? ? -175.01 -178.73 44 7 PRO A 103 ? ? -69.79 88.11 45 7 LYS A 111 ? ? -38.43 -75.20 46 7 GLU A 119 ? ? -92.80 -61.65 47 7 GLU A 135 ? ? -59.89 97.85 48 7 ALA A 153 ? ? -171.66 119.49 49 8 SER A 77 ? ? -46.68 171.50 50 8 PRO A 103 ? ? -69.77 83.67 51 8 ILE A 105 ? ? -100.36 -60.49 52 8 LYS A 111 ? ? -36.58 -75.02 53 8 GLU A 119 ? ? -107.03 -60.63 54 8 GLU A 135 ? ? -57.74 101.13 55 8 LEU A 145 ? ? -40.36 157.40 56 8 THR A 152 ? ? -49.43 106.22 57 8 SER A 158 ? ? -44.93 170.27 58 9 SER A 70 ? ? -125.65 -58.92 59 9 PRO A 103 ? ? -69.65 88.85 60 9 LYS A 111 ? ? -37.23 -71.08 61 9 GLU A 119 ? ? -92.72 -62.62 62 9 ARG A 129 ? ? -48.75 -18.41 63 9 ASN A 133 ? ? 72.85 43.39 64 9 GLU A 135 ? ? -52.91 102.74 65 10 PRO A 103 ? ? -69.70 90.04 66 10 GLU A 106 ? ? -164.57 118.86 67 10 LYS A 111 ? ? -35.68 -75.01 68 10 PRO A 156 ? ? -69.74 0.19 69 11 SER A 70 ? ? 37.77 42.29 70 11 LYS A 75 ? ? -84.24 47.40 71 11 SER A 77 ? ? -51.99 -178.69 72 11 PRO A 103 ? ? -69.75 92.22 73 11 LYS A 111 ? ? -36.59 -75.11 74 11 ARG A 129 ? ? -49.67 -17.90 75 11 GLU A 135 ? ? -49.91 99.43 76 11 SER A 154 ? ? -67.50 85.63 77 12 SER A 70 ? ? -59.50 108.03 78 12 SER A 72 ? ? -100.54 76.57 79 12 SER A 73 ? ? -163.95 107.81 80 12 SER A 77 ? ? -64.53 -174.73 81 12 PRO A 103 ? ? -69.73 79.90 82 12 VAL A 104 ? ? -44.02 155.98 83 12 LYS A 111 ? ? -34.97 -75.31 84 12 GLU A 135 ? ? -54.51 99.51 85 12 LEU A 150 ? ? -85.60 35.82 86 12 ARG A 151 ? ? -69.18 95.09 87 13 SER A 73 ? ? -117.57 79.02 88 13 PRO A 103 ? ? -69.77 84.50 89 13 LYS A 111 ? ? -35.30 -75.32 90 13 GLU A 135 ? ? -52.98 105.81 91 14 SER A 70 ? ? -161.03 118.32 92 14 ALA A 76 ? ? -123.44 -51.33 93 14 PRO A 103 ? ? -69.82 89.46 94 14 LYS A 111 ? ? -34.29 -75.36 95 14 GLU A 119 ? ? -92.53 -61.71 96 14 ASN A 133 ? ? 72.97 50.93 97 14 GLU A 135 ? ? -47.19 106.68 98 14 THR A 147 ? ? -172.70 139.23 99 15 PRO A 103 ? ? -69.74 81.70 100 15 LYS A 111 ? ? -36.00 -71.21 101 15 GLU A 135 ? ? -50.55 107.72 102 15 GLN A 137 ? ? 47.72 29.48 103 15 SER A 154 ? ? -38.07 127.72 104 15 SER A 157 ? ? -38.89 143.20 105 16 SER A 70 ? ? -173.64 121.80 106 16 LYS A 75 ? ? 37.32 38.70 107 16 PRO A 103 ? ? -69.77 89.23 108 16 LYS A 111 ? ? -36.54 -74.90 109 16 ARG A 129 ? ? -47.97 -19.80 110 16 GLU A 135 ? ? -53.28 106.72 111 16 GLN A 137 ? ? 49.83 25.78 112 16 SER A 148 ? ? -98.29 38.11 113 16 ALA A 153 ? ? -34.88 103.50 114 17 SER A 70 ? ? -100.44 41.79 115 17 SER A 77 ? ? -63.71 -178.94 116 17 PRO A 103 ? ? -69.76 83.42 117 17 ILE A 105 ? ? -99.99 -61.08 118 17 LYS A 111 ? ? -35.37 -75.22 119 17 GLU A 135 ? ? -56.46 107.58 120 17 SER A 146 ? ? -83.61 41.48 121 17 THR A 147 ? ? 46.20 28.65 122 17 SER A 148 ? ? -34.79 125.96 123 18 LYS A 75 ? ? -105.72 43.30 124 18 PRO A 103 ? ? -69.78 91.15 125 18 LYS A 111 ? ? -37.65 -71.11 126 18 ASN A 133 ? ? 72.13 50.45 127 18 GLU A 135 ? ? -51.48 102.94 128 18 SER A 154 ? ? 38.46 40.28 129 19 SER A 69 ? ? -55.07 176.70 130 19 ALA A 76 ? ? -46.95 159.56 131 19 PRO A 103 ? ? -69.71 90.60 132 19 LYS A 111 ? ? -34.75 -75.36 133 19 GLU A 135 ? ? -49.37 104.66 134 19 THR A 152 ? ? -130.58 -31.07 135 19 SER A 154 ? ? 37.54 42.42 136 19 SER A 158 ? ? 39.89 41.53 137 20 SER A 72 ? ? 37.06 42.74 138 20 SER A 77 ? ? -67.76 -179.21 139 20 PRO A 103 ? ? -69.69 83.85 140 20 GLU A 106 ? ? -166.65 119.32 141 20 LYS A 111 ? ? -35.52 -75.27 142 20 LEU A 150 ? ? -35.83 -31.93 143 20 SER A 157 ? ? -63.36 83.24 #