data_2DH7 # _entry.id 2DH7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DH7 pdb_00002dh7 10.2210/pdb2dh7/pdb RCSB RCSB025415 ? ? WWPDB D_1000025415 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hso002000434.3 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DH7 _pdbx_database_status.recvd_initial_deposition_date 2006-03-23 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Imai, T.' 1 'Tsuda, K.' 2 'Muto, Y.' 3 'Inoue, M.' 4 'Kigawa, T.' 5 'Terada, T.' 6 'Shirouzu, M.' 7 'Yokoyama, S.' 8 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 9 # _citation.id primary _citation.title 'Solution structure of the second RNA binding domain in Nucleolysin TIAR' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Imai, T.' 1 ? primary 'Tsuda, K.' 2 ? primary 'Muto, Y.' 3 ? primary 'Inoue, M.' 4 ? primary 'Kigawa, T.' 5 ? primary 'Terada, T.' 6 ? primary 'Shirouzu, M.' 7 ? primary 'Yokoyama, S.' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Nucleolysin TIAR' _entity.formula_weight 11175.430 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RNA recognition motif' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'TIA-1-related protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQ WLGGRQIRTNWATRKPPAPSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQ WLGGRQIRTNWATRKPPAPSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hso002000434.3 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 GLN n 1 9 LYS n 1 10 LYS n 1 11 ASP n 1 12 THR n 1 13 SER n 1 14 ASN n 1 15 HIS n 1 16 PHE n 1 17 HIS n 1 18 VAL n 1 19 PHE n 1 20 VAL n 1 21 GLY n 1 22 ASP n 1 23 LEU n 1 24 SER n 1 25 PRO n 1 26 GLU n 1 27 ILE n 1 28 THR n 1 29 THR n 1 30 GLU n 1 31 ASP n 1 32 ILE n 1 33 LYS n 1 34 SER n 1 35 ALA n 1 36 PHE n 1 37 ALA n 1 38 PRO n 1 39 PHE n 1 40 GLY n 1 41 LYS n 1 42 ILE n 1 43 SER n 1 44 ASP n 1 45 ALA n 1 46 ARG n 1 47 VAL n 1 48 VAL n 1 49 LYS n 1 50 ASP n 1 51 MET n 1 52 ALA n 1 53 THR n 1 54 GLY n 1 55 LYS n 1 56 SER n 1 57 LYS n 1 58 GLY n 1 59 TYR n 1 60 GLY n 1 61 PHE n 1 62 VAL n 1 63 SER n 1 64 PHE n 1 65 TYR n 1 66 ASN n 1 67 LYS n 1 68 LEU n 1 69 ASP n 1 70 ALA n 1 71 GLU n 1 72 ASN n 1 73 ALA n 1 74 ILE n 1 75 VAL n 1 76 HIS n 1 77 MET n 1 78 GLY n 1 79 GLY n 1 80 GLN n 1 81 TRP n 1 82 LEU n 1 83 GLY n 1 84 GLY n 1 85 ARG n 1 86 GLN n 1 87 ILE n 1 88 ARG n 1 89 THR n 1 90 ASN n 1 91 TRP n 1 92 ALA n 1 93 THR n 1 94 ARG n 1 95 LYS n 1 96 PRO n 1 97 PRO n 1 98 ALA n 1 99 PRO n 1 100 SER n 1 101 GLY n 1 102 PRO n 1 103 SER n 1 104 SER n 1 105 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene TIAL1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Cell free synthesis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050719-24 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TIAR_HUMAN _struct_ref.pdbx_db_accession Q01085 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 87 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2DH7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 99 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q01085 _struct_ref_seq.db_align_beg 87 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 180 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 89 _struct_ref_seq.pdbx_auth_seq_align_end 180 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2DH7 GLY A 1 ? UNP Q01085 ? ? 'cloning artifact' 82 1 1 2DH7 SER A 2 ? UNP Q01085 ? ? 'cloning artifact' 83 2 1 2DH7 SER A 3 ? UNP Q01085 ? ? 'cloning artifact' 84 3 1 2DH7 GLY A 4 ? UNP Q01085 ? ? 'cloning artifact' 85 4 1 2DH7 SER A 5 ? UNP Q01085 ? ? 'cloning artifact' 86 5 1 2DH7 SER A 6 ? UNP Q01085 ? ? 'cloning artifact' 87 6 1 2DH7 GLY A 7 ? UNP Q01085 ? ? 'cloning artifact' 88 7 1 2DH7 SER A 100 ? UNP Q01085 ? ? 'cloning artifact' 181 8 1 2DH7 GLY A 101 ? UNP Q01085 ? ? 'cloning artifact' 182 9 1 2DH7 PRO A 102 ? UNP Q01085 ? ? 'cloning artifact' 183 10 1 2DH7 SER A 103 ? UNP Q01085 ? ? 'cloning artifact' 184 11 1 2DH7 SER A 104 ? UNP Q01085 ? ? 'cloning artifact' 185 12 1 2DH7 GLY A 105 ? UNP Q01085 ? ? 'cloning artifact' 186 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '20mM d-Tris-HCl(pH 7.0), 100mM NaCl, 1mM d-DTT, 0.02% NaN3, 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2DH7 _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2DH7 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the lowest energy, structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2DH7 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20030801 Delaglio,F 2 'data analysis' NMRView 5.0.4 Johnson,B.A 3 'data analysis' KUJIRA 0.932 Kobayashi,N 4 'structure solution' CYANA 2.0 Guntert,P 5 refinement CYANA 2.0 Guntert,P 6 # _exptl.entry_id 2DH7 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2DH7 _struct.title 'Solution structure of the second RNA binding domain in Nucleolysin TIAR' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DH7 _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;RRM domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RNA BINDING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 28 ? PHE A 36 ? THR A 109 PHE A 117 1 ? 9 HELX_P HELX_P2 2 ASN A 66 ? MET A 77 ? ASN A 147 MET A 158 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 16 ? GLY A 21 ? PHE A 97 GLY A 102 A 2 SER A 56 ? PHE A 64 ? SER A 137 PHE A 145 A 3 ILE A 42 ? LYS A 49 ? ILE A 123 LYS A 130 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 20 ? N VAL A 101 O GLY A 60 ? O GLY A 141 A 2 3 O SER A 63 ? O SER A 144 N ASP A 44 ? N ASP A 125 # _database_PDB_matrix.entry_id 2DH7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2DH7 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 82 82 GLY GLY A . n A 1 2 SER 2 83 83 SER SER A . n A 1 3 SER 3 84 84 SER SER A . n A 1 4 GLY 4 85 85 GLY GLY A . n A 1 5 SER 5 86 86 SER SER A . n A 1 6 SER 6 87 87 SER SER A . n A 1 7 GLY 7 88 88 GLY GLY A . n A 1 8 GLN 8 89 89 GLN GLN A . n A 1 9 LYS 9 90 90 LYS LYS A . n A 1 10 LYS 10 91 91 LYS LYS A . n A 1 11 ASP 11 92 92 ASP ASP A . n A 1 12 THR 12 93 93 THR THR A . n A 1 13 SER 13 94 94 SER SER A . n A 1 14 ASN 14 95 95 ASN ASN A . n A 1 15 HIS 15 96 96 HIS HIS A . n A 1 16 PHE 16 97 97 PHE PHE A . n A 1 17 HIS 17 98 98 HIS HIS A . n A 1 18 VAL 18 99 99 VAL VAL A . n A 1 19 PHE 19 100 100 PHE PHE A . n A 1 20 VAL 20 101 101 VAL VAL A . n A 1 21 GLY 21 102 102 GLY GLY A . n A 1 22 ASP 22 103 103 ASP ASP A . n A 1 23 LEU 23 104 104 LEU LEU A . n A 1 24 SER 24 105 105 SER SER A . n A 1 25 PRO 25 106 106 PRO PRO A . n A 1 26 GLU 26 107 107 GLU GLU A . n A 1 27 ILE 27 108 108 ILE ILE A . n A 1 28 THR 28 109 109 THR THR A . n A 1 29 THR 29 110 110 THR THR A . n A 1 30 GLU 30 111 111 GLU GLU A . n A 1 31 ASP 31 112 112 ASP ASP A . n A 1 32 ILE 32 113 113 ILE ILE A . n A 1 33 LYS 33 114 114 LYS LYS A . n A 1 34 SER 34 115 115 SER SER A . n A 1 35 ALA 35 116 116 ALA ALA A . n A 1 36 PHE 36 117 117 PHE PHE A . n A 1 37 ALA 37 118 118 ALA ALA A . n A 1 38 PRO 38 119 119 PRO PRO A . n A 1 39 PHE 39 120 120 PHE PHE A . n A 1 40 GLY 40 121 121 GLY GLY A . n A 1 41 LYS 41 122 122 LYS LYS A . n A 1 42 ILE 42 123 123 ILE ILE A . n A 1 43 SER 43 124 124 SER SER A . n A 1 44 ASP 44 125 125 ASP ASP A . n A 1 45 ALA 45 126 126 ALA ALA A . n A 1 46 ARG 46 127 127 ARG ARG A . n A 1 47 VAL 47 128 128 VAL VAL A . n A 1 48 VAL 48 129 129 VAL VAL A . n A 1 49 LYS 49 130 130 LYS LYS A . n A 1 50 ASP 50 131 131 ASP ASP A . n A 1 51 MET 51 132 132 MET MET A . n A 1 52 ALA 52 133 133 ALA ALA A . n A 1 53 THR 53 134 134 THR THR A . n A 1 54 GLY 54 135 135 GLY GLY A . n A 1 55 LYS 55 136 136 LYS LYS A . n A 1 56 SER 56 137 137 SER SER A . n A 1 57 LYS 57 138 138 LYS LYS A . n A 1 58 GLY 58 139 139 GLY GLY A . n A 1 59 TYR 59 140 140 TYR TYR A . n A 1 60 GLY 60 141 141 GLY GLY A . n A 1 61 PHE 61 142 142 PHE PHE A . n A 1 62 VAL 62 143 143 VAL VAL A . n A 1 63 SER 63 144 144 SER SER A . n A 1 64 PHE 64 145 145 PHE PHE A . n A 1 65 TYR 65 146 146 TYR TYR A . n A 1 66 ASN 66 147 147 ASN ASN A . n A 1 67 LYS 67 148 148 LYS LYS A . n A 1 68 LEU 68 149 149 LEU LEU A . n A 1 69 ASP 69 150 150 ASP ASP A . n A 1 70 ALA 70 151 151 ALA ALA A . n A 1 71 GLU 71 152 152 GLU GLU A . n A 1 72 ASN 72 153 153 ASN ASN A . n A 1 73 ALA 73 154 154 ALA ALA A . n A 1 74 ILE 74 155 155 ILE ILE A . n A 1 75 VAL 75 156 156 VAL VAL A . n A 1 76 HIS 76 157 157 HIS HIS A . n A 1 77 MET 77 158 158 MET MET A . n A 1 78 GLY 78 159 159 GLY GLY A . n A 1 79 GLY 79 160 160 GLY GLY A . n A 1 80 GLN 80 161 161 GLN GLN A . n A 1 81 TRP 81 162 162 TRP TRP A . n A 1 82 LEU 82 163 163 LEU LEU A . n A 1 83 GLY 83 164 164 GLY GLY A . n A 1 84 GLY 84 165 165 GLY GLY A . n A 1 85 ARG 85 166 166 ARG ARG A . n A 1 86 GLN 86 167 167 GLN GLN A . n A 1 87 ILE 87 168 168 ILE ILE A . n A 1 88 ARG 88 169 169 ARG ARG A . n A 1 89 THR 89 170 170 THR THR A . n A 1 90 ASN 90 171 171 ASN ASN A . n A 1 91 TRP 91 172 172 TRP TRP A . n A 1 92 ALA 92 173 173 ALA ALA A . n A 1 93 THR 93 174 174 THR THR A . n A 1 94 ARG 94 175 175 ARG ARG A . n A 1 95 LYS 95 176 176 LYS LYS A . n A 1 96 PRO 96 177 177 PRO PRO A . n A 1 97 PRO 97 178 178 PRO PRO A . n A 1 98 ALA 98 179 179 ALA ALA A . n A 1 99 PRO 99 180 180 PRO PRO A . n A 1 100 SER 100 181 181 SER SER A . n A 1 101 GLY 101 182 182 GLY GLY A . n A 1 102 PRO 102 183 183 PRO PRO A . n A 1 103 SER 103 184 184 SER SER A . n A 1 104 SER 104 185 185 SER SER A . n A 1 105 GLY 105 186 186 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-09-23 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 87 ? ? -68.80 96.99 2 1 SER A 105 ? ? -36.19 153.56 3 1 PRO A 119 ? ? -47.93 -17.19 4 1 SER A 137 ? ? -40.90 104.22 5 1 GLN A 161 ? ? -38.86 148.13 6 1 SER A 184 ? ? -170.78 130.40 7 2 LYS A 91 ? ? -94.28 40.61 8 2 SER A 105 ? ? -35.94 152.16 9 2 THR A 110 ? ? -39.01 -35.97 10 2 PRO A 119 ? ? -47.98 -17.02 11 2 ILE A 155 ? ? -38.64 -39.73 12 2 GLN A 161 ? ? -36.74 154.94 13 2 LEU A 163 ? ? -84.29 -70.89 14 2 THR A 174 ? ? -52.89 103.58 15 3 SER A 83 ? ? -122.37 -53.46 16 3 THR A 93 ? ? 34.17 53.03 17 3 SER A 94 ? ? -44.96 92.84 18 3 ASN A 95 ? ? 34.43 36.24 19 3 HIS A 96 ? ? -50.66 174.49 20 3 SER A 105 ? ? -35.85 153.22 21 3 PRO A 119 ? ? -47.98 -17.03 22 3 SER A 137 ? ? -55.23 102.61 23 3 ILE A 155 ? ? -39.31 -37.72 24 3 GLN A 161 ? ? -38.25 157.82 25 3 LEU A 163 ? ? -90.88 -70.50 26 3 SER A 181 ? ? -59.30 175.62 27 4 LYS A 90 ? ? -95.29 46.78 28 4 LYS A 91 ? ? -53.23 106.30 29 4 THR A 93 ? ? -35.29 125.79 30 4 SER A 94 ? ? -128.33 -50.35 31 4 SER A 105 ? ? -41.61 153.31 32 4 PRO A 119 ? ? -48.00 -17.07 33 4 ALA A 133 ? ? -101.58 -62.55 34 4 GLN A 161 ? ? -34.32 149.74 35 4 LEU A 163 ? ? -87.24 -71.04 36 5 LYS A 91 ? ? -89.20 44.77 37 5 SER A 94 ? ? -124.32 -59.13 38 5 ASN A 95 ? ? -98.94 43.40 39 5 SER A 105 ? ? -36.64 155.23 40 5 THR A 110 ? ? -39.75 -37.49 41 5 PRO A 119 ? ? -48.06 -16.75 42 5 GLN A 161 ? ? -34.78 151.51 43 5 LEU A 163 ? ? -85.31 -70.08 44 5 ALA A 173 ? ? -87.53 42.97 45 6 SER A 94 ? ? -129.93 -56.10 46 6 HIS A 96 ? ? -42.28 152.92 47 6 SER A 105 ? ? -39.67 153.44 48 6 ILE A 108 ? ? -50.00 151.02 49 6 PRO A 119 ? ? -47.93 -17.12 50 6 SER A 137 ? ? -47.61 106.88 51 6 TYR A 140 ? ? -171.98 144.68 52 6 GLN A 161 ? ? -38.61 155.19 53 6 ALA A 173 ? ? -39.52 -37.83 54 6 SER A 181 ? ? -36.42 120.60 55 7 GLN A 89 ? ? -105.85 79.11 56 7 SER A 105 ? ? -40.44 153.60 57 7 PRO A 119 ? ? -47.93 -17.12 58 7 ALA A 133 ? ? -99.92 -62.69 59 7 SER A 137 ? ? -45.99 109.59 60 7 GLN A 161 ? ? -39.06 149.02 61 7 LEU A 163 ? ? -87.34 -71.71 62 7 ALA A 173 ? ? -85.88 37.81 63 8 ASP A 92 ? ? -49.85 174.43 64 8 SER A 105 ? ? -35.00 152.45 65 8 PRO A 119 ? ? -47.98 -17.04 66 8 ALA A 133 ? ? -106.64 -62.94 67 8 SER A 137 ? ? -37.24 119.31 68 8 GLN A 161 ? ? -37.30 153.44 69 8 LEU A 163 ? ? -85.47 -70.22 70 9 LYS A 91 ? ? -163.50 108.72 71 9 SER A 94 ? ? -130.04 -36.78 72 9 SER A 105 ? ? -45.53 152.73 73 9 PRO A 119 ? ? -48.01 -17.08 74 9 ALA A 133 ? ? -130.19 -55.71 75 9 SER A 137 ? ? -54.20 109.27 76 9 ILE A 155 ? ? -39.03 -36.78 77 9 GLN A 161 ? ? -35.27 152.37 78 9 LEU A 163 ? ? -87.42 -70.36 79 9 ALA A 173 ? ? -53.86 89.98 80 9 PRO A 178 ? ? -69.73 81.45 81 10 GLN A 89 ? ? -48.02 93.28 82 10 LYS A 91 ? ? 43.61 26.57 83 10 SER A 94 ? ? -130.77 -47.58 84 10 SER A 105 ? ? -43.12 153.23 85 10 PRO A 119 ? ? -48.00 -17.16 86 10 SER A 137 ? ? -49.09 104.80 87 10 GLN A 161 ? ? -35.21 152.31 88 10 LEU A 163 ? ? -87.57 -70.26 89 11 SER A 83 ? ? -125.89 -51.43 90 11 SER A 87 ? ? -41.75 156.59 91 11 SER A 105 ? ? -40.81 155.20 92 11 THR A 110 ? ? -36.74 -32.02 93 11 PRO A 119 ? ? -47.98 -17.02 94 11 SER A 137 ? ? -58.86 98.45 95 11 GLN A 161 ? ? -35.80 152.12 96 11 LEU A 163 ? ? -86.77 -70.45 97 11 ASN A 171 ? ? -172.96 149.90 98 11 SER A 181 ? ? -44.38 168.32 99 12 HIS A 96 ? ? -44.47 165.56 100 12 PRO A 119 ? ? -48.02 -19.57 101 12 GLN A 161 ? ? -37.14 154.06 102 12 LEU A 163 ? ? -85.06 -71.32 103 12 PRO A 178 ? ? -69.74 -178.08 104 13 SER A 86 ? ? -89.82 40.21 105 13 LYS A 90 ? ? -109.56 68.90 106 13 SER A 105 ? ? -36.09 153.39 107 13 PRO A 119 ? ? -47.96 -17.10 108 13 SER A 137 ? ? -45.92 109.25 109 13 ILE A 155 ? ? -34.59 -34.79 110 13 GLN A 161 ? ? -34.27 150.80 111 13 LEU A 163 ? ? -87.47 -70.56 112 13 ALA A 173 ? ? -84.11 37.64 113 13 PRO A 180 ? ? -69.72 2.79 114 13 SER A 181 ? ? -34.59 124.69 115 14 SER A 86 ? ? -42.24 107.96 116 14 LYS A 91 ? ? 39.51 31.69 117 14 SER A 94 ? ? -133.23 -53.46 118 14 SER A 105 ? ? -35.51 152.33 119 14 ALA A 133 ? ? -102.82 -61.64 120 14 SER A 137 ? ? -43.34 108.95 121 14 LEU A 163 ? ? -87.03 -72.34 122 14 PRO A 180 ? ? -69.77 -164.46 123 15 GLN A 89 ? ? -34.70 137.41 124 15 LYS A 91 ? ? 36.32 53.17 125 15 THR A 93 ? ? 43.96 29.46 126 15 SER A 105 ? ? -38.03 153.57 127 15 ALA A 126 ? ? -174.77 123.62 128 15 GLN A 161 ? ? -36.30 152.26 129 15 ALA A 173 ? ? -82.91 38.73 130 16 SER A 87 ? ? -68.56 96.25 131 16 SER A 105 ? ? -42.41 153.68 132 16 PRO A 119 ? ? -47.97 -17.08 133 16 SER A 137 ? ? -39.03 114.26 134 16 GLN A 161 ? ? -35.14 151.03 135 16 LEU A 163 ? ? -85.41 -71.20 136 17 GLN A 89 ? ? -37.95 143.60 137 17 LYS A 90 ? ? -101.65 42.61 138 17 HIS A 96 ? ? -40.43 153.28 139 17 SER A 105 ? ? -45.30 153.54 140 17 PRO A 119 ? ? -47.96 -17.14 141 17 SER A 137 ? ? -47.07 105.85 142 17 GLN A 161 ? ? -37.69 156.70 143 17 LEU A 163 ? ? -86.15 -70.14 144 17 ASN A 171 ? ? -174.24 147.07 145 17 LYS A 176 ? ? -171.77 145.87 146 18 GLN A 89 ? ? -38.31 157.58 147 18 HIS A 96 ? ? -37.87 143.96 148 18 SER A 105 ? ? -38.66 153.06 149 18 PRO A 119 ? ? -47.99 -18.10 150 18 SER A 137 ? ? -41.85 109.17 151 18 GLN A 161 ? ? -37.50 155.60 152 18 LEU A 163 ? ? -86.18 -70.70 153 18 ARG A 175 ? ? -117.38 50.93 154 19 SER A 87 ? ? -100.14 -64.26 155 19 PRO A 119 ? ? -48.01 -17.09 156 19 ALA A 126 ? ? -173.25 132.36 157 19 ALA A 133 ? ? -94.63 -60.44 158 19 SER A 137 ? ? -46.76 105.89 159 19 GLN A 161 ? ? -40.16 154.41 160 19 LEU A 163 ? ? -85.54 -73.14 161 19 LYS A 176 ? ? -170.18 132.70 162 19 PRO A 178 ? ? -69.72 -178.93 163 20 LYS A 91 ? ? -83.05 45.98 164 20 SER A 105 ? ? -35.74 153.64 165 20 PRO A 119 ? ? -47.96 -19.00 166 20 ALA A 133 ? ? -131.14 -56.38 167 20 GLN A 161 ? ? -37.28 149.02 168 20 LEU A 163 ? ? -86.36 -70.43 169 20 PRO A 180 ? ? -69.78 2.83 #