data_2DIU # _entry.id 2DIU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DIU pdb_00002diu 10.2210/pdb2diu/pdb RCSB RCSB025463 ? ? WWPDB D_1000025463 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk002100419.2 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DIU _pdbx_database_status.recvd_initial_deposition_date 2006-03-30 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dang, W.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Shirouzu, M.' 5 'Terada, T.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the RRM domain of KIAA0430 protein' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dang, W.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Shirouzu, M.' 5 ? primary 'Terada, T.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'KIAA0430 protein' _entity.formula_weight 10382.630 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RRM domain' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGCHTLLYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSITGCSAILRFINQDSAERAQKRMENEDVFGNRIIVSF TPKNRELCETSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGCHTLLYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSITGCSAILRFINQDSAERAQKRMENEDVFGNRIIVSF TPKNRELCETSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk002100419.2 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 CYS n 1 9 HIS n 1 10 THR n 1 11 LEU n 1 12 LEU n 1 13 TYR n 1 14 VAL n 1 15 TYR n 1 16 ASN n 1 17 LEU n 1 18 PRO n 1 19 ALA n 1 20 ASN n 1 21 LYS n 1 22 ASP n 1 23 GLY n 1 24 LYS n 1 25 SER n 1 26 VAL n 1 27 SER n 1 28 ASN n 1 29 ARG n 1 30 LEU n 1 31 ARG n 1 32 ARG n 1 33 LEU n 1 34 SER n 1 35 ASP n 1 36 ASN n 1 37 CYS n 1 38 GLY n 1 39 GLY n 1 40 LYS n 1 41 VAL n 1 42 LEU n 1 43 SER n 1 44 ILE n 1 45 THR n 1 46 GLY n 1 47 CYS n 1 48 SER n 1 49 ALA n 1 50 ILE n 1 51 LEU n 1 52 ARG n 1 53 PHE n 1 54 ILE n 1 55 ASN n 1 56 GLN n 1 57 ASP n 1 58 SER n 1 59 ALA n 1 60 GLU n 1 61 ARG n 1 62 ALA n 1 63 GLN n 1 64 LYS n 1 65 ARG n 1 66 MET n 1 67 GLU n 1 68 ASN n 1 69 GLU n 1 70 ASP n 1 71 VAL n 1 72 PHE n 1 73 GLY n 1 74 ASN n 1 75 ARG n 1 76 ILE n 1 77 ILE n 1 78 VAL n 1 79 SER n 1 80 PHE n 1 81 THR n 1 82 PRO n 1 83 LYS n 1 84 ASN n 1 85 ARG n 1 86 GLU n 1 87 LEU n 1 88 CYS n 1 89 GLU n 1 90 THR n 1 91 SER n 1 92 GLY n 1 93 PRO n 1 94 SER n 1 95 SER n 1 96 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene KIAA0430 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Cell free synthesis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050822-01 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code BAA24860 _struct_ref.pdbx_db_accession 71891770 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 274 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2DIU _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 90 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 71891770 _struct_ref_seq.db_align_beg 274 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 356 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 90 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2DIU GLY A 1 ? GB 71891770 ? ? 'cloning artifact' 1 1 1 2DIU SER A 2 ? GB 71891770 ? ? 'cloning artifact' 2 2 1 2DIU SER A 3 ? GB 71891770 ? ? 'cloning artifact' 3 3 1 2DIU GLY A 4 ? GB 71891770 ? ? 'cloning artifact' 4 4 1 2DIU SER A 5 ? GB 71891770 ? ? 'cloning artifact' 5 5 1 2DIU SER A 6 ? GB 71891770 ? ? 'cloning artifact' 6 6 1 2DIU GLY A 7 ? GB 71891770 ? ? 'cloning artifact' 7 7 1 2DIU SER A 91 ? GB 71891770 ? ? 'cloning artifact' 91 8 1 2DIU GLY A 92 ? GB 71891770 ? ? 'cloning artifact' 92 9 1 2DIU PRO A 93 ? GB 71891770 ? ? 'cloning artifact' 93 10 1 2DIU SER A 94 ? GB 71891770 ? ? 'cloning artifact' 94 11 1 2DIU SER A 95 ? GB 71891770 ? ? 'cloning artifact' 95 12 1 2DIU GLY A 96 ? GB 71891770 ? ? 'cloning artifact' 96 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90%H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2DIU _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2DIU _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the lowest energy, structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2DIU _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 2.6 Bruker 1 processing NMRPipe 20031121 Delaglio,F. 2 'data analysis' NMRView 5.0.4 Johnson,B.A. 3 'data analysis' KUJIRA 0.932 Kobayashi,N. 4 'structure solution' CYANA 2.0.17 Guntert,P. 5 refinement CYANA 2.0.17 Guntert,P. 6 # _exptl.entry_id 2DIU _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2DIU _struct.title 'Solution structure of the RRM domain of KIAA0430 protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DIU _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;structural genomics, RRM domain, KIAA0430 protein, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RNA BINDING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 23 ? ASP A 35 ? GLY A 23 ASP A 35 1 ? 13 HELX_P HELX_P2 2 GLN A 56 ? ARG A 65 ? GLN A 56 ARG A 65 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 39 ? VAL A 41 ? GLY A 39 VAL A 41 A 2 ALA A 49 ? PHE A 53 ? ALA A 49 PHE A 53 A 3 THR A 10 ? TYR A 15 ? THR A 10 TYR A 15 A 4 ILE A 77 ? SER A 79 ? ILE A 77 SER A 79 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 43 ? N SER A 43 O ILE A 50 ? O ILE A 50 A 2 3 O PHE A 53 ? O PHE A 53 N THR A 10 ? N THR A 10 A 3 4 N TYR A 13 ? N TYR A 13 O SER A 79 ? O SER A 79 # _database_PDB_matrix.entry_id 2DIU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2DIU _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 CYS 8 8 8 CYS CYS A . n A 1 9 HIS 9 9 9 HIS HIS A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 TYR 13 13 13 TYR TYR A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 TYR 15 15 15 TYR TYR A . n A 1 16 ASN 16 16 16 ASN ASN A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ASN 20 20 20 ASN ASN A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 ARG 29 29 29 ARG ARG A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 CYS 37 37 37 CYS CYS A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 CYS 47 47 47 CYS CYS A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 GLN 56 56 56 GLN GLN A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 GLN 63 63 63 GLN GLN A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 ARG 65 65 65 ARG ARG A . n A 1 66 MET 66 66 66 MET MET A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 PHE 72 72 72 PHE PHE A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 PHE 80 80 80 PHE PHE A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 CYS 88 88 88 CYS CYS A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 GLY 96 96 96 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-09-30 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 650 ;HELIX Determination method: Author determined ; 700 ;SHEET Determination method: Author determined ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 2 ? ? -122.51 -56.48 2 1 SER A 3 ? ? -50.11 102.82 3 1 HIS A 9 ? ? -45.16 169.04 4 1 PRO A 18 ? ? -69.78 84.28 5 1 ASP A 22 ? ? -35.23 126.67 6 1 SER A 27 ? ? -36.82 -71.40 7 1 ARG A 61 ? ? -37.70 -32.86 8 1 PHE A 72 ? ? -165.63 113.71 9 1 LYS A 83 ? ? -103.27 43.28 10 1 CYS A 88 ? ? -100.12 50.61 11 2 SER A 6 ? ? -85.60 47.07 12 2 PRO A 18 ? ? -69.71 85.73 13 2 ASP A 22 ? ? -34.58 124.19 14 2 VAL A 41 ? ? -56.99 92.62 15 2 ARG A 61 ? ? -37.41 -33.59 16 2 PHE A 72 ? ? -165.54 109.02 17 2 CYS A 88 ? ? -127.81 -51.72 18 2 SER A 94 ? ? -34.60 135.24 19 2 SER A 95 ? ? -170.83 128.00 20 3 PRO A 18 ? ? -69.70 98.98 21 3 ASP A 22 ? ? -34.65 129.13 22 3 VAL A 41 ? ? -65.26 93.36 23 3 ARG A 61 ? ? -36.09 -33.95 24 3 ARG A 65 ? ? -90.28 -65.87 25 3 PHE A 72 ? ? -167.84 110.48 26 3 SER A 91 ? ? -101.42 40.43 27 4 PRO A 18 ? ? -69.74 90.16 28 4 LYS A 21 ? ? -57.52 108.38 29 4 ASP A 22 ? ? -34.47 125.14 30 4 VAL A 41 ? ? -64.64 93.41 31 4 ARG A 61 ? ? -35.52 -35.13 32 4 ARG A 65 ? ? -93.89 -61.42 33 4 SER A 95 ? ? -121.41 -57.08 34 5 PRO A 18 ? ? -69.78 87.23 35 5 ASP A 22 ? ? -34.72 124.13 36 5 CYS A 37 ? ? -85.16 31.04 37 5 ARG A 61 ? ? -37.37 -32.82 38 5 ARG A 65 ? ? -92.60 -61.99 39 5 ASN A 74 ? ? -168.22 117.47 40 5 LYS A 83 ? ? -85.35 42.72 41 5 LEU A 87 ? ? 36.23 42.82 42 5 CYS A 88 ? ? -105.23 41.72 43 6 PRO A 18 ? ? -69.74 87.78 44 6 VAL A 41 ? ? -64.54 95.35 45 6 ARG A 61 ? ? -33.70 -36.77 46 6 GLU A 67 ? ? -39.32 -37.55 47 6 PHE A 72 ? ? -164.49 113.58 48 6 ASN A 74 ? ? -172.61 138.67 49 6 LYS A 83 ? ? -90.94 47.90 50 7 SER A 5 ? ? -67.69 80.74 51 7 PRO A 18 ? ? -69.69 91.75 52 7 ASP A 22 ? ? -36.51 129.09 53 7 VAL A 41 ? ? -56.65 97.23 54 7 ARG A 61 ? ? -38.65 -27.71 55 7 ARG A 65 ? ? -90.04 -64.66 56 7 PHE A 72 ? ? -162.48 111.14 57 7 LYS A 83 ? ? -102.44 42.14 58 7 SER A 94 ? ? -126.27 -55.06 59 8 SER A 2 ? ? -46.89 168.18 60 8 SER A 3 ? ? -170.90 138.73 61 8 PRO A 18 ? ? -69.74 85.88 62 8 ASP A 22 ? ? -34.80 123.91 63 8 CYS A 37 ? ? -99.43 32.21 64 8 VAL A 41 ? ? -60.63 93.31 65 8 CYS A 47 ? ? -85.37 32.14 66 8 PHE A 72 ? ? -165.55 106.00 67 8 ASN A 74 ? ? -170.01 120.82 68 8 LEU A 87 ? ? -132.50 -36.70 69 8 CYS A 88 ? ? 34.35 50.33 70 9 PRO A 18 ? ? -69.84 89.36 71 9 CYS A 37 ? ? -96.14 31.98 72 9 VAL A 41 ? ? -58.84 95.90 73 9 ASP A 57 ? ? -42.39 -70.40 74 9 GLU A 67 ? ? -39.05 -30.92 75 9 PHE A 72 ? ? -162.62 106.30 76 9 LYS A 83 ? ? -97.16 52.23 77 9 PRO A 93 ? ? -69.77 -175.60 78 10 SER A 5 ? ? -38.75 132.12 79 10 HIS A 9 ? ? -50.14 173.57 80 10 PRO A 18 ? ? -69.72 88.27 81 10 ASP A 22 ? ? -35.91 122.16 82 10 VAL A 41 ? ? -68.28 92.14 83 10 PHE A 72 ? ? -160.06 104.96 84 10 LYS A 83 ? ? -97.09 35.48 85 10 SER A 91 ? ? -172.18 112.45 86 10 SER A 94 ? ? 35.24 42.53 87 11 CYS A 8 ? ? -46.65 152.51 88 11 PRO A 18 ? ? -69.75 91.35 89 11 ASP A 22 ? ? -36.25 124.41 90 11 VAL A 41 ? ? -58.99 98.75 91 11 ARG A 61 ? ? -36.85 -33.15 92 11 PHE A 72 ? ? -169.56 110.76 93 11 SER A 91 ? ? -170.33 132.03 94 12 PRO A 18 ? ? -69.72 84.63 95 12 VAL A 26 ? ? -56.09 -72.52 96 12 VAL A 41 ? ? -59.47 93.66 97 12 ASP A 57 ? ? -38.40 -70.40 98 12 ARG A 61 ? ? -35.60 -36.81 99 12 ARG A 65 ? ? -90.34 -64.22 100 12 PHE A 72 ? ? -167.23 107.23 101 12 ARG A 85 ? ? 32.67 35.62 102 12 GLU A 89 ? ? -129.89 -59.86 103 13 PRO A 18 ? ? -69.78 80.70 104 13 VAL A 41 ? ? -69.01 94.44 105 13 ASP A 57 ? ? -44.05 -70.33 106 13 PHE A 72 ? ? -167.05 105.99 107 13 LEU A 87 ? ? -133.78 -35.81 108 13 SER A 95 ? ? -174.96 126.21 109 14 SER A 5 ? ? 38.67 44.32 110 14 PRO A 18 ? ? -69.75 90.32 111 14 ASP A 22 ? ? -35.86 124.36 112 14 CYS A 37 ? ? -93.54 31.45 113 14 VAL A 41 ? ? -59.92 98.55 114 14 ARG A 61 ? ? -34.91 -34.14 115 14 ARG A 65 ? ? -94.97 -68.62 116 14 GLU A 69 ? ? -47.22 175.23 117 14 LYS A 83 ? ? -99.52 47.39 118 14 CYS A 88 ? ? -97.96 -61.75 119 14 SER A 91 ? ? -63.99 96.58 120 15 SER A 6 ? ? -39.43 122.44 121 15 PRO A 18 ? ? -69.79 99.36 122 15 ASP A 22 ? ? -34.42 129.47 123 15 VAL A 41 ? ? -58.77 103.58 124 15 ARG A 61 ? ? -35.84 -32.12 125 16 HIS A 9 ? ? -56.18 173.09 126 16 PRO A 18 ? ? -69.81 88.73 127 16 LYS A 21 ? ? -58.06 109.05 128 16 ASP A 22 ? ? -35.44 125.23 129 16 VAL A 41 ? ? -56.91 96.60 130 16 ASP A 57 ? ? -33.47 -70.28 131 16 GLU A 67 ? ? -39.60 -33.33 132 16 PHE A 72 ? ? -172.98 106.50 133 16 GLU A 86 ? ? -172.70 117.26 134 16 LEU A 87 ? ? -36.37 148.43 135 16 SER A 94 ? ? -36.43 101.24 136 17 PRO A 18 ? ? -69.76 88.01 137 17 GLU A 67 ? ? -39.12 -31.58 138 17 PHE A 72 ? ? -174.91 105.50 139 17 LYS A 83 ? ? -91.47 44.21 140 18 PRO A 18 ? ? -69.75 83.02 141 18 ASP A 22 ? ? -36.91 122.76 142 18 VAL A 26 ? ? -48.34 -70.04 143 18 SER A 27 ? ? -34.25 -70.41 144 18 VAL A 41 ? ? -60.79 91.78 145 18 CYS A 47 ? ? -83.98 34.84 146 18 ARG A 61 ? ? -37.86 -31.79 147 18 GLU A 69 ? ? -33.87 138.44 148 18 PHE A 72 ? ? -166.93 106.76 149 18 CYS A 88 ? ? -92.51 46.67 150 18 SER A 94 ? ? -36.23 131.29 151 19 SER A 6 ? ? -84.71 43.35 152 19 CYS A 8 ? ? -103.21 40.79 153 19 PRO A 18 ? ? -69.74 87.48 154 19 VAL A 41 ? ? -68.67 98.23 155 19 GLU A 67 ? ? -39.01 -31.87 156 19 PHE A 72 ? ? -166.76 105.00 157 19 LYS A 83 ? ? -91.97 54.81 158 19 ASN A 84 ? ? -132.54 -42.97 159 19 GLU A 89 ? ? -106.82 -69.81 160 19 SER A 95 ? ? -174.47 126.66 161 20 SER A 3 ? ? -99.08 42.00 162 20 PRO A 18 ? ? -69.79 84.65 163 20 ASP A 22 ? ? -35.91 124.69 164 20 VAL A 41 ? ? -57.61 92.48 165 20 ASP A 57 ? ? -33.81 -70.41 166 20 PHE A 72 ? ? -168.03 113.22 167 20 LYS A 83 ? ? -104.91 44.31 168 20 ASN A 84 ? ? -84.69 47.05 169 20 GLU A 86 ? ? -170.88 149.34 170 20 LEU A 87 ? ? -129.80 -54.70 171 20 CYS A 88 ? ? 34.98 45.48 172 20 GLU A 89 ? ? -46.50 152.52 173 20 THR A 90 ? ? -60.45 88.62 #