HEADER RNA BINDING PROTEIN 30-MAR-06 2DIW TITLE SOLUTION STRUCTURE OF THE RPR DOMAIN OF PUTATIVE RNA-BINDING PROTEIN TITLE 2 16 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE RNA-BINDING PROTEIN 16; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RPR DOMAIN; COMPND 5 SYNONYM: RNA BINDING MOTIF PROTEIN 16, KIAA1116 PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RBM16; KIAA1116; SOURCE 6 EXPRESSION_SYSTEM: CELL FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P050719-03; SOURCE 9 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS STRUCTURE GENOMICS, RPR DOMAIN, PUTATIVE RNA-BINDING PROTEIN 16, KEYWDS 2 STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL KEYWDS 3 AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 4 INITIATIVE, RSGI, RNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR W.DANG,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2DIW 1 REMARK SEQADV REVDAT 2 24-FEB-09 2DIW 1 VERSN REVDAT 1 30-SEP-06 2DIW 0 JRNL AUTH W.DANG,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE RPR DOMAIN OF PUTATIVE RNA-BINDING JRNL TITL 2 PROTEIN 16 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 2.6, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT,P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DIW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000025465. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20MM D-TRIS-HCL(PH 7.0); 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; 10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9321, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION,STRUCTURES WITH REMARK 210 THE LOWEST ENERGY,STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 52 -70.76 -47.04 REMARK 500 1 CYS A 63 -174.54 -52.32 REMARK 500 1 PRO A 65 -19.66 -47.97 REMARK 500 1 HIS A 84 -65.78 -94.02 REMARK 500 1 ASP A 91 150.56 -36.85 REMARK 500 1 CYS A 111 157.29 -44.42 REMARK 500 1 PRO A 112 -19.62 -48.04 REMARK 500 1 MET A 143 -36.77 -36.70 REMARK 500 2 ASP A 8 108.74 -170.59 REMARK 500 2 MET A 10 33.28 35.21 REMARK 500 2 LYS A 50 -25.59 -39.40 REMARK 500 2 CYS A 63 -174.61 -62.91 REMARK 500 2 PRO A 65 -19.34 -47.93 REMARK 500 2 HIS A 84 -65.12 -93.96 REMARK 500 2 ASP A 91 154.19 -41.26 REMARK 500 2 CYS A 111 161.32 -48.94 REMARK 500 2 LYS A 116 -34.93 -38.93 REMARK 500 2 MET A 143 -38.81 -38.02 REMARK 500 2 SER A 150 -50.25 -128.99 REMARK 500 3 MET A 10 42.96 -80.52 REMARK 500 3 SER A 31 123.74 -38.57 REMARK 500 3 TYR A 49 -32.31 -39.98 REMARK 500 3 LYS A 50 -25.89 -39.20 REMARK 500 3 PHE A 59 -34.86 -39.70 REMARK 500 3 PRO A 65 -19.47 -47.99 REMARK 500 3 HIS A 84 -68.63 -93.98 REMARK 500 3 ASP A 91 144.30 -34.65 REMARK 500 3 CYS A 111 157.36 -44.70 REMARK 500 3 LYS A 116 -38.44 -37.68 REMARK 500 4 ASP A 8 40.56 -87.56 REMARK 500 4 TYR A 49 -31.60 -39.58 REMARK 500 4 LYS A 50 -25.45 -39.78 REMARK 500 4 PHE A 59 -34.10 -39.60 REMARK 500 4 PRO A 65 -17.44 -47.99 REMARK 500 4 HIS A 84 -66.37 -93.73 REMARK 500 4 ASP A 91 151.56 -48.16 REMARK 500 4 PRO A 112 -19.19 -47.95 REMARK 500 4 SER A 147 41.97 35.65 REMARK 500 5 MET A 10 36.71 34.51 REMARK 500 5 LYS A 14 -39.51 -33.93 REMARK 500 5 TYR A 49 -31.72 -38.46 REMARK 500 5 LYS A 50 -31.58 -38.51 REMARK 500 5 PHE A 59 -34.32 -39.85 REMARK 500 5 CYS A 63 -179.56 -61.01 REMARK 500 5 PRO A 65 -19.32 -47.97 REMARK 500 5 HIS A 84 -66.41 -94.22 REMARK 500 5 MET A 143 -38.80 -39.49 REMARK 500 5 PRO A 149 99.64 -69.70 REMARK 500 6 SER A 2 108.74 -173.59 REMARK 500 6 MET A 10 39.87 -98.69 REMARK 500 REMARK 500 THIS ENTRY HAS 213 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002101090.1 RELATED DB: TARGETDB DBREF 2DIW A 8 146 GB 40789049 BAA83068 58 196 SEQADV 2DIW GLY A 1 GB 40789049 CLONING ARTIFACT SEQADV 2DIW SER A 2 GB 40789049 CLONING ARTIFACT SEQADV 2DIW SER A 3 GB 40789049 CLONING ARTIFACT SEQADV 2DIW GLY A 4 GB 40789049 CLONING ARTIFACT SEQADV 2DIW SER A 5 GB 40789049 CLONING ARTIFACT SEQADV 2DIW SER A 6 GB 40789049 CLONING ARTIFACT SEQADV 2DIW GLY A 7 GB 40789049 CLONING ARTIFACT SEQADV 2DIW SER A 147 GB 40789049 CLONING ARTIFACT SEQADV 2DIW GLY A 148 GB 40789049 CLONING ARTIFACT SEQADV 2DIW PRO A 149 GB 40789049 CLONING ARTIFACT SEQADV 2DIW SER A 150 GB 40789049 CLONING ARTIFACT SEQADV 2DIW SER A 151 GB 40789049 CLONING ARTIFACT SEQADV 2DIW GLY A 152 GB 40789049 CLONING ARTIFACT SEQRES 1 A 152 GLY SER SER GLY SER SER GLY ASP ASN MET GLU ALA VAL SEQRES 2 A 152 LYS THR PHE ASN SER GLU LEU TYR SER LEU ASN ASP TYR SEQRES 3 A 152 LYS PRO PRO ILE SER LYS ALA LYS MET THR GLN ILE THR SEQRES 4 A 152 LYS ALA ALA ILE LYS ALA ILE LYS PHE TYR LYS HIS VAL SEQRES 5 A 152 VAL GLN SER VAL GLU LYS PHE ILE GLN LYS CYS LYS PRO SEQRES 6 A 152 GLU TYR LYS VAL PRO GLY LEU TYR VAL ILE ASP SER ILE SEQRES 7 A 152 VAL ARG GLN SER ARG HIS GLN PHE GLY GLN GLU LYS ASP SEQRES 8 A 152 VAL PHE ALA PRO ARG PHE SER ASN ASN ILE ILE SER THR SEQRES 9 A 152 PHE GLN ASN LEU TYR ARG CYS PRO GLY ASP ASP LYS SER SEQRES 10 A 152 LYS ILE VAL ARG VAL LEU ASN LEU TRP GLN LYS ASN ASN SEQRES 11 A 152 VAL PHE LYS SER GLU ILE ILE GLN PRO LEU LEU ASP MET SEQRES 12 A 152 ALA ALA GLY SER GLY PRO SER SER GLY HELIX 1 1 GLU A 11 SER A 22 1 12 HELIX 2 2 LEU A 23 ASP A 25 5 3 HELIX 3 3 LYS A 32 LYS A 44 1 13 HELIX 4 4 ALA A 45 PHE A 48 1 4 HELIX 5 5 TYR A 49 LYS A 62 1 14 HELIX 6 6 LYS A 68 GLN A 85 1 18 HELIX 7 7 PHE A 93 GLN A 106 1 14 HELIX 8 8 LYS A 116 ASN A 129 1 14 HELIX 9 9 SER A 134 MET A 143 1 10 CISPEP 1 PRO A 28 PRO A 29 1 -0.01 CISPEP 2 PRO A 28 PRO A 29 2 0.07 CISPEP 3 PRO A 28 PRO A 29 3 -0.03 CISPEP 4 PRO A 28 PRO A 29 4 -0.10 CISPEP 5 PRO A 28 PRO A 29 5 -0.06 CISPEP 6 PRO A 28 PRO A 29 6 -0.07 CISPEP 7 PRO A 28 PRO A 29 7 -0.05 CISPEP 8 PRO A 28 PRO A 29 8 0.02 CISPEP 9 PRO A 28 PRO A 29 9 -0.04 CISPEP 10 PRO A 28 PRO A 29 10 -0.10 CISPEP 11 PRO A 28 PRO A 29 11 -0.05 CISPEP 12 PRO A 28 PRO A 29 12 0.04 CISPEP 13 PRO A 28 PRO A 29 13 -0.05 CISPEP 14 PRO A 28 PRO A 29 14 -0.10 CISPEP 15 PRO A 28 PRO A 29 15 -0.07 CISPEP 16 PRO A 28 PRO A 29 16 -0.03 CISPEP 17 PRO A 28 PRO A 29 17 -0.05 CISPEP 18 PRO A 28 PRO A 29 18 -0.08 CISPEP 19 PRO A 28 PRO A 29 19 -0.10 CISPEP 20 PRO A 28 PRO A 29 20 -0.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1