HEADER PROTEIN BINDING 30-MAR-06 2DIY TITLE THE SOLUTION STRUCTURE OF THE THIOREDOXIN DOMAIN OF HUMAN THIOREDOXIN- TITLE 2 LIKE PROTEIN 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOREDOXIN-LIKE PROTEIN 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: THIOREDOXIN DOMAIN, RESIDUES 8-124; COMPND 5 SYNONYM: PKC-INTERACTING COUSIN OF THIOREDOXIN, PKC-THETA-INTERACTING COMPND 6 PROTEIN, PKCQ-INTERACTING PROTEIN; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TXNL2; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P050302-06; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS PKC-INTERACTING COUSIN OF THIOREDOXIN, PKC-THETA-INTERACTING PROTEIN, KEYWDS 2 PICOT, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 3 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 4 GENOMICS/PROTEOMICS INITIATIVE, RSGI, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2DIY 1 REMARK SEQADV REVDAT 2 24-FEB-09 2DIY 1 VERSN REVDAT 1 03-APR-07 2DIY 0 JRNL AUTH N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA JRNL TITL THE SOLUTION STRUCTURE OF THE THIOREDOXIN DOMAIN OF HUMAN JRNL TITL 2 THIOREDOXIN-LIKE PROTEIN 2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DIY COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000025467. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.3MM THIOREDOXIN DOMAIN U REMARK 210 -15N,13C; 20MM D-TRIS HCL; 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; 90% REMARK 210 H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.955, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH REMARK 210 THE LEAST RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 106.98 -173.62 REMARK 500 1 LYS A 36 40.24 -84.33 REMARK 500 1 PRO A 48 1.31 -69.71 REMARK 500 1 ALA A 123 -35.56 -34.89 REMARK 500 1 SER A 125 116.61 -39.57 REMARK 500 2 SER A 5 108.49 -46.85 REMARK 500 2 ALA A 10 91.13 -66.71 REMARK 500 2 ALA A 18 137.04 -175.00 REMARK 500 2 LYS A 36 38.55 -87.83 REMARK 500 2 GLN A 55 -38.64 -35.43 REMARK 500 2 VAL A 80 78.60 -112.87 REMARK 500 2 ASN A 100 41.38 72.04 REMARK 500 2 ALA A 123 -39.18 -39.11 REMARK 500 2 SER A 124 105.36 -45.51 REMARK 500 3 ALA A 12 109.19 -57.04 REMARK 500 3 ALA A 18 40.82 -82.07 REMARK 500 3 LYS A 36 38.44 -87.79 REMARK 500 3 CYS A 53 -28.66 -38.45 REMARK 500 3 ILE A 89 94.88 -69.84 REMARK 500 3 ASN A 100 40.32 74.21 REMARK 500 3 SER A 124 138.29 -34.81 REMARK 500 4 SER A 3 42.62 70.27 REMARK 500 4 SER A 5 134.30 -173.16 REMARK 500 4 ALA A 16 141.57 -173.41 REMARK 500 4 ALA A 18 45.68 -97.46 REMARK 500 4 LYS A 36 35.33 -85.93 REMARK 500 4 MET A 56 -35.40 -39.89 REMARK 500 4 ASN A 100 47.84 72.18 REMARK 500 4 ALA A 123 -34.00 -34.14 REMARK 500 4 PRO A 127 2.72 -69.73 REMARK 500 4 SER A 128 119.32 -35.44 REMARK 500 5 MET A 8 105.39 -166.57 REMARK 500 5 ALA A 18 41.73 -100.88 REMARK 500 5 SER A 25 139.95 -174.30 REMARK 500 5 LYS A 36 40.21 -92.92 REMARK 500 5 PRO A 48 2.97 -69.79 REMARK 500 5 THR A 94 115.72 -160.90 REMARK 500 5 ASN A 100 39.38 74.85 REMARK 500 5 ALA A 123 -35.85 -34.06 REMARK 500 6 SER A 5 117.22 -170.21 REMARK 500 6 SER A 6 48.60 -83.40 REMARK 500 6 ALA A 12 41.61 72.17 REMARK 500 6 LYS A 36 39.45 -83.09 REMARK 500 6 CYS A 53 -33.84 -38.98 REMARK 500 6 ALA A 54 -70.35 -36.78 REMARK 500 6 THR A 94 113.45 -161.09 REMARK 500 6 ASN A 100 41.47 72.39 REMARK 500 6 ALA A 110 97.27 -66.14 REMARK 500 6 ALA A 123 -39.93 -34.11 REMARK 500 6 SER A 124 110.21 -36.55 REMARK 500 REMARK 500 THIS ENTRY HAS 170 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2DIY A 8 124 UNP O76003 TXNL2_HUMAN 1 117 SEQADV 2DIY GLY A 1 UNP O76003 CLONING ARTIFACT SEQADV 2DIY SER A 2 UNP O76003 CLONING ARTIFACT SEQADV 2DIY SER A 3 UNP O76003 CLONING ARTIFACT SEQADV 2DIY GLY A 4 UNP O76003 CLONING ARTIFACT SEQADV 2DIY SER A 5 UNP O76003 CLONING ARTIFACT SEQADV 2DIY SER A 6 UNP O76003 CLONING ARTIFACT SEQADV 2DIY GLY A 7 UNP O76003 CLONING ARTIFACT SEQADV 2DIY SER A 125 UNP O76003 CLONING ARTIFACT SEQADV 2DIY GLY A 126 UNP O76003 CLONING ARTIFACT SEQADV 2DIY PRO A 127 UNP O76003 CLONING ARTIFACT SEQADV 2DIY SER A 128 UNP O76003 CLONING ARTIFACT SEQADV 2DIY SER A 129 UNP O76003 CLONING ARTIFACT SEQADV 2DIY GLY A 130 UNP O76003 CLONING ARTIFACT SEQRES 1 A 130 GLY SER SER GLY SER SER GLY MET ALA ALA GLY ALA ALA SEQRES 2 A 130 GLU ALA ALA VAL ALA ALA VAL GLU GLU VAL GLY SER ALA SEQRES 3 A 130 GLY GLN PHE GLU GLU LEU LEU ARG LEU LYS ALA LYS SER SEQRES 4 A 130 LEU LEU VAL VAL HIS PHE TRP ALA PRO TRP ALA PRO GLN SEQRES 5 A 130 CYS ALA GLN MET ASN GLU VAL MET ALA GLU LEU ALA LYS SEQRES 6 A 130 GLU LEU PRO GLN VAL SER PHE VAL LYS LEU GLU ALA GLU SEQRES 7 A 130 GLY VAL PRO GLU VAL SER GLU LYS TYR GLU ILE SER SER SEQRES 8 A 130 VAL PRO THR PHE LEU PHE PHE LYS ASN SER GLN LYS ILE SEQRES 9 A 130 ASP ARG LEU ASP GLY ALA HIS ALA PRO GLU LEU THR LYS SEQRES 10 A 130 LYS VAL GLN ARG HIS ALA SER SER GLY PRO SER SER GLY HELIX 1 1 SER A 25 LYS A 36 1 12 HELIX 2 2 PRO A 51 LEU A 67 1 17 HELIX 3 3 VAL A 80 GLU A 88 1 9 HELIX 4 4 HIS A 111 SER A 124 1 14 SHEET 1 A 5 GLU A 21 VAL A 23 0 SHEET 2 A 5 VAL A 70 GLU A 76 1 O LYS A 74 N VAL A 23 SHEET 3 A 5 LEU A 40 TRP A 46 1 N LEU A 40 O SER A 71 SHEET 4 A 5 THR A 94 PHE A 98 -1 O THR A 94 N PHE A 45 SHEET 5 A 5 LYS A 103 ASP A 108 -1 O LEU A 107 N PHE A 95 CISPEP 1 VAL A 92 PRO A 93 1 -0.07 CISPEP 2 VAL A 92 PRO A 93 2 -0.09 CISPEP 3 VAL A 92 PRO A 93 3 -0.14 CISPEP 4 VAL A 92 PRO A 93 4 0.00 CISPEP 5 VAL A 92 PRO A 93 5 -0.02 CISPEP 6 VAL A 92 PRO A 93 6 -0.05 CISPEP 7 VAL A 92 PRO A 93 7 -0.05 CISPEP 8 VAL A 92 PRO A 93 8 -0.06 CISPEP 9 VAL A 92 PRO A 93 9 -0.02 CISPEP 10 VAL A 92 PRO A 93 10 -0.03 CISPEP 11 VAL A 92 PRO A 93 11 -0.03 CISPEP 12 VAL A 92 PRO A 93 12 -0.12 CISPEP 13 VAL A 92 PRO A 93 13 -0.05 CISPEP 14 VAL A 92 PRO A 93 14 -0.08 CISPEP 15 VAL A 92 PRO A 93 15 -0.06 CISPEP 16 VAL A 92 PRO A 93 16 -0.13 CISPEP 17 VAL A 92 PRO A 93 17 -0.06 CISPEP 18 VAL A 92 PRO A 93 18 -0.11 CISPEP 19 VAL A 92 PRO A 93 19 -0.03 CISPEP 20 VAL A 92 PRO A 93 20 -0.05 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1