data_2DK2 # _entry.id 2DK2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DK2 pdb_00002dk2 10.2210/pdb2dk2/pdb RCSB RCSB025507 ? ? WWPDB D_1000025507 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsi002004045.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DK2 _pdbx_database_status.recvd_initial_deposition_date 2006-04-06 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'He, F.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Shirouzu, M.' 5 'Terada, T.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of RRM domain in heterogeneous nuclear ribonucleoprotein R (hnRNP R)' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'He, F.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Shirouzu, M.' 5 ? primary 'Terada, T.' 6 ? primary 'Yokoyama, S.' 7 ? # _cell.entry_id 2DK2 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2DK2 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Heterogeneous nuclear ribonucleoprotein R' _entity.formula_weight 10620.083 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RRM domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'hnRNP R' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIE IVLAKPPDKKRSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIE IVLAKPPDKKRSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsi002004045.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ASP n 1 9 PRO n 1 10 GLU n 1 11 VAL n 1 12 MET n 1 13 ALA n 1 14 LYS n 1 15 VAL n 1 16 LYS n 1 17 VAL n 1 18 LEU n 1 19 PHE n 1 20 VAL n 1 21 ARG n 1 22 ASN n 1 23 LEU n 1 24 ALA n 1 25 THR n 1 26 THR n 1 27 VAL n 1 28 THR n 1 29 GLU n 1 30 GLU n 1 31 ILE n 1 32 LEU n 1 33 GLU n 1 34 LYS n 1 35 SER n 1 36 PHE n 1 37 SER n 1 38 GLU n 1 39 PHE n 1 40 GLY n 1 41 LYS n 1 42 LEU n 1 43 GLU n 1 44 ARG n 1 45 VAL n 1 46 LYS n 1 47 LYS n 1 48 LEU n 1 49 LYS n 1 50 ASP n 1 51 TYR n 1 52 ALA n 1 53 PHE n 1 54 VAL n 1 55 HIS n 1 56 PHE n 1 57 GLU n 1 58 ASP n 1 59 ARG n 1 60 GLY n 1 61 ALA n 1 62 ALA n 1 63 VAL n 1 64 LYS n 1 65 ALA n 1 66 MET n 1 67 ASP n 1 68 GLU n 1 69 MET n 1 70 ASN n 1 71 GLY n 1 72 LYS n 1 73 GLU n 1 74 ILE n 1 75 GLU n 1 76 GLY n 1 77 GLU n 1 78 GLU n 1 79 ILE n 1 80 GLU n 1 81 ILE n 1 82 VAL n 1 83 LEU n 1 84 ALA n 1 85 LYS n 1 86 PRO n 1 87 PRO n 1 88 ASP n 1 89 LYS n 1 90 LYS n 1 91 ARG n 1 92 SER n 1 93 GLY n 1 94 PRO n 1 95 SER n 1 96 SER n 1 97 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene HNRPR _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Cell free synthesis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050509-18 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HNRPR_HUMAN _struct_ref.pdbx_db_accession O43390 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 333 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2DK2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 91 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O43390 _struct_ref_seq.db_align_beg 333 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 416 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 91 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2DK2 GLY A 1 ? UNP O43390 ? ? 'cloning artifact' 1 1 1 2DK2 SER A 2 ? UNP O43390 ? ? 'cloning artifact' 2 2 1 2DK2 SER A 3 ? UNP O43390 ? ? 'cloning artifact' 3 3 1 2DK2 GLY A 4 ? UNP O43390 ? ? 'cloning artifact' 4 4 1 2DK2 SER A 5 ? UNP O43390 ? ? 'cloning artifact' 5 5 1 2DK2 SER A 6 ? UNP O43390 ? ? 'cloning artifact' 6 6 1 2DK2 GLY A 7 ? UNP O43390 ? ? 'cloning artifact' 7 7 1 2DK2 SER A 92 ? UNP O43390 ? ? 'cloning artifact' 92 8 1 2DK2 GLY A 93 ? UNP O43390 ? ? 'cloning artifact' 93 9 1 2DK2 PRO A 94 ? UNP O43390 ? ? 'cloning artifact' 94 10 1 2DK2 SER A 95 ? UNP O43390 ? ? 'cloning artifact' 95 11 1 2DK2 SER A 96 ? UNP O43390 ? ? 'cloning artifact' 96 12 1 2DK2 GLY A 97 ? UNP O43390 ? ? 'cloning artifact' 97 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.8mM U-15N,13C; 20mM phosphate buffer NA; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2DK2 _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2DK2 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the lowest energy, structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2DK2 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 2.6 Bruker 1 processing NMRPipe 20031121 Delaglio,F. 2 'data analysis' NMRView 5.0.4 Johnson,B.A. 3 'data analysis' KUJIRA 0.9321 Kobayashi,N. 4 'structure solution' CYANA 2.1 Guntert,P. 5 refinement CYANA 2.1 Guntert,P. 6 # _exptl.entry_id 2DK2 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2DK2 _struct.title 'Solution structure of RRM domain in heterogeneous nuclear ribonucleoprotein R (hnRNP R)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DK2 _struct_keywords.pdbx_keywords 'GENE REGULATION' _struct_keywords.text ;RRM domain, Heterogeneous nuclear ribonucleoprotein R, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, GENE REGULATION ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 9 ? ALA A 13 ? PRO A 9 ALA A 13 1 ? 5 HELX_P HELX_P2 2 GLU A 29 ? SER A 37 ? GLU A 29 SER A 37 1 ? 9 HELX_P HELX_P3 3 ARG A 59 ? MET A 69 ? ARG A 59 MET A 69 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 44 ? LEU A 48 ? ARG A 44 LEU A 48 A 2 TYR A 51 ? PHE A 56 ? TYR A 51 PHE A 56 A 3 VAL A 17 ? ARG A 21 ? VAL A 17 ARG A 21 A 4 GLU A 80 ? LEU A 83 ? GLU A 80 LEU A 83 B 1 GLU A 73 ? ILE A 74 ? GLU A 73 ILE A 74 B 2 GLU A 77 ? GLU A 78 ? GLU A 77 GLU A 78 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 43 ? N GLU A 43 O HIS A 55 ? O HIS A 55 A 2 3 O ALA A 52 ? O ALA A 52 N VAL A 20 ? N VAL A 20 A 3 4 N ARG A 21 ? N ARG A 21 O GLU A 80 ? O GLU A 80 B 1 2 N ILE A 74 ? N ILE A 74 O GLU A 77 ? O GLU A 77 # _database_PDB_matrix.entry_id 2DK2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2DK2 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 MET 12 12 12 MET MET A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 PHE 19 19 19 PHE PHE A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 PHE 39 39 39 PHE PHE A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 ARG 44 44 44 ARG ARG A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 HIS 55 55 55 HIS HIS A . n A 1 56 PHE 56 56 56 PHE PHE A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 MET 66 66 66 MET MET A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 MET 69 69 69 MET MET A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 ILE 74 74 74 ILE ILE A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 PRO 86 86 86 PRO PRO A . n A 1 87 PRO 87 87 87 PRO PRO A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 ARG 91 91 91 ARG ARG A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 GLY 97 97 97 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-10-06 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 22 ? ? 57.39 75.90 2 1 LYS A 41 ? ? -53.83 102.56 3 1 LEU A 42 ? ? -59.31 175.79 4 1 ARG A 44 ? ? -179.29 137.17 5 1 LYS A 49 ? ? 63.27 -163.07 6 1 ASN A 70 ? ? -51.99 104.55 7 1 ASP A 88 ? ? 61.34 179.70 8 1 SER A 96 ? ? 57.40 93.47 9 2 ASN A 22 ? ? 54.02 73.63 10 2 LYS A 41 ? ? -60.95 98.91 11 2 LEU A 42 ? ? -55.38 175.88 12 2 ARG A 44 ? ? -179.30 137.42 13 2 LYS A 49 ? ? 62.89 -163.25 14 2 ASN A 70 ? ? -52.05 106.40 15 2 GLU A 78 ? ? -53.26 105.76 16 2 LYS A 89 ? ? 57.36 88.25 17 3 ASN A 22 ? ? 55.91 72.73 18 3 LYS A 41 ? ? -54.26 105.13 19 3 ARG A 44 ? ? -179.25 137.69 20 3 LYS A 49 ? ? 63.14 -163.33 21 3 ASN A 70 ? ? -56.70 100.51 22 3 PRO A 87 ? ? -69.77 -173.49 23 3 ASP A 88 ? ? 56.12 79.19 24 4 SER A 6 ? ? -103.16 74.51 25 4 ASN A 22 ? ? 57.81 75.84 26 4 ARG A 44 ? ? -178.06 143.32 27 4 LYS A 49 ? ? 63.20 -163.28 28 4 ASN A 70 ? ? -53.67 109.61 29 4 PRO A 94 ? ? -69.70 -174.48 30 4 SER A 95 ? ? -176.64 -39.62 31 4 SER A 96 ? ? 59.43 -172.76 32 5 SER A 2 ? ? -119.72 54.82 33 5 SER A 3 ? ? -67.50 99.39 34 5 LYS A 14 ? ? -97.00 33.67 35 5 ASN A 22 ? ? 58.39 71.17 36 5 ARG A 44 ? ? -178.03 142.80 37 5 LYS A 49 ? ? 63.11 -163.31 38 5 ARG A 91 ? ? 60.09 83.74 39 5 SER A 96 ? ? 61.66 171.39 40 6 LYS A 14 ? ? -103.96 -74.39 41 6 VAL A 15 ? ? 60.31 99.83 42 6 ASN A 22 ? ? 57.41 71.65 43 6 LYS A 41 ? ? -51.95 109.64 44 6 ARG A 44 ? ? -176.34 140.49 45 6 LYS A 49 ? ? 63.02 -163.24 46 6 ASP A 58 ? ? -164.17 -170.00 47 6 LYS A 89 ? ? 56.15 88.45 48 6 PRO A 94 ? ? -69.77 90.58 49 6 SER A 96 ? ? 55.02 -173.25 50 7 SER A 3 ? ? -152.04 60.98 51 7 ASN A 22 ? ? 56.90 74.19 52 7 LYS A 41 ? ? -56.46 100.17 53 7 LEU A 42 ? ? -56.89 176.52 54 7 ARG A 44 ? ? -179.31 138.44 55 7 LYS A 49 ? ? 63.04 -163.18 56 7 ASN A 70 ? ? -54.40 101.86 57 8 SER A 5 ? ? -171.73 -42.40 58 8 ASN A 22 ? ? 55.75 76.24 59 8 LEU A 42 ? ? -68.97 -179.12 60 8 ARG A 44 ? ? -179.21 135.99 61 8 LYS A 49 ? ? 63.13 -163.24 62 8 ASN A 70 ? ? -55.04 101.98 63 8 PRO A 87 ? ? -69.76 -179.49 64 8 ASP A 88 ? ? -177.04 145.25 65 9 SER A 5 ? ? 52.61 82.57 66 9 ASN A 22 ? ? 55.99 77.37 67 9 ARG A 44 ? ? -179.23 136.42 68 9 LYS A 49 ? ? 63.05 -163.18 69 9 ASN A 70 ? ? -52.10 104.83 70 9 GLU A 78 ? ? -61.73 98.60 71 9 SER A 92 ? ? 52.47 88.48 72 9 PRO A 94 ? ? -69.78 96.09 73 10 SER A 2 ? ? 56.40 86.98 74 10 SER A 3 ? ? -162.21 100.13 75 10 SER A 6 ? ? 59.49 82.53 76 10 LYS A 16 ? ? -146.32 26.38 77 10 ASN A 22 ? ? 57.53 75.52 78 10 ARG A 44 ? ? -179.33 139.97 79 10 LYS A 49 ? ? 63.31 -163.20 80 10 SER A 96 ? ? 63.13 -179.69 81 11 SER A 2 ? ? -162.64 -51.03 82 11 SER A 5 ? ? -173.14 135.14 83 11 ASN A 22 ? ? 53.25 75.83 84 11 SER A 35 ? ? -66.13 -71.39 85 11 LYS A 41 ? ? -59.53 104.38 86 11 ARG A 44 ? ? -179.27 143.73 87 11 LYS A 49 ? ? 63.29 -163.20 88 11 ASP A 58 ? ? -179.07 -177.11 89 11 ASN A 70 ? ? -52.05 106.94 90 11 ASP A 88 ? ? 58.79 -178.94 91 11 LYS A 89 ? ? -172.91 126.77 92 11 SER A 96 ? ? 58.13 -172.35 93 12 SER A 5 ? ? 57.16 83.26 94 12 LYS A 16 ? ? -140.39 25.62 95 12 ASN A 22 ? ? 55.66 71.64 96 12 LYS A 41 ? ? -52.14 104.39 97 12 ARG A 44 ? ? -179.29 141.06 98 12 LYS A 49 ? ? 63.26 -163.15 99 12 ASP A 88 ? ? -161.17 -72.30 100 12 LYS A 89 ? ? 62.49 177.34 101 12 ARG A 91 ? ? 61.72 -179.54 102 12 SER A 92 ? ? 57.39 -179.22 103 12 SER A 96 ? ? -159.75 31.44 104 13 SER A 2 ? ? -136.64 -47.78 105 13 LYS A 16 ? ? -142.23 26.07 106 13 ASN A 22 ? ? 52.94 73.62 107 13 LYS A 41 ? ? -55.47 105.34 108 13 ARG A 44 ? ? -175.77 135.26 109 13 LYS A 49 ? ? 63.31 -163.20 110 13 ASN A 70 ? ? -58.61 105.92 111 13 GLU A 78 ? ? -66.68 97.80 112 13 LYS A 90 ? ? 59.72 -178.00 113 13 SER A 96 ? ? 61.71 175.17 114 14 SER A 3 ? ? -169.02 -65.53 115 14 SER A 5 ? ? 51.99 85.86 116 14 ASN A 22 ? ? 57.65 76.11 117 14 ARG A 44 ? ? -179.41 140.76 118 14 LYS A 49 ? ? 63.34 -163.22 119 14 ASN A 70 ? ? -52.26 103.33 120 14 ASP A 88 ? ? -147.23 48.68 121 14 LYS A 89 ? ? 53.72 73.91 122 14 PRO A 94 ? ? -69.78 -172.57 123 14 SER A 96 ? ? 59.78 179.94 124 15 SER A 2 ? ? 54.34 78.13 125 15 SER A 5 ? ? -165.95 -59.91 126 15 SER A 6 ? ? -176.49 137.21 127 15 ASN A 22 ? ? 57.33 72.34 128 15 ARG A 44 ? ? -174.37 135.00 129 15 LYS A 49 ? ? 63.24 -163.10 130 15 ASP A 88 ? ? 56.82 -174.72 131 15 PRO A 94 ? ? -69.79 -177.33 132 16 SER A 2 ? ? -104.90 -73.62 133 16 SER A 6 ? ? 54.05 71.82 134 16 LYS A 16 ? ? -144.25 26.73 135 16 ASN A 22 ? ? 57.12 74.51 136 16 ARG A 44 ? ? -178.00 138.95 137 16 LYS A 49 ? ? 63.32 -163.16 138 16 ASN A 70 ? ? -53.17 108.79 139 16 SER A 92 ? ? 57.69 81.58 140 16 PRO A 94 ? ? -69.74 92.23 141 16 SER A 96 ? ? 63.14 176.05 142 17 SER A 3 ? ? 60.34 -178.20 143 17 LYS A 16 ? ? -146.83 33.10 144 17 ASN A 22 ? ? 56.61 75.13 145 17 LYS A 41 ? ? -52.02 109.74 146 17 ARG A 44 ? ? -179.20 138.05 147 17 LYS A 49 ? ? 63.08 -163.21 148 17 ASN A 70 ? ? -54.99 101.98 149 18 ASN A 22 ? ? 55.18 79.40 150 18 LYS A 41 ? ? -54.22 108.14 151 18 ARG A 44 ? ? -178.05 137.24 152 18 LYS A 49 ? ? 63.20 -163.18 153 18 ASP A 58 ? ? -176.53 -177.49 154 18 ASN A 70 ? ? -53.20 108.23 155 18 GLU A 78 ? ? -67.33 97.16 156 18 ASP A 88 ? ? -109.62 77.16 157 18 PRO A 94 ? ? -69.78 88.56 158 19 SER A 6 ? ? 62.30 99.12 159 19 LYS A 16 ? ? -141.32 25.99 160 19 ASN A 22 ? ? 57.59 75.38 161 19 SER A 35 ? ? -75.95 -70.30 162 19 ARG A 44 ? ? -176.52 138.10 163 19 LYS A 49 ? ? 63.12 -163.22 164 20 SER A 3 ? ? -176.42 125.88 165 20 SER A 6 ? ? -108.10 50.72 166 20 ASN A 22 ? ? 58.70 73.79 167 20 LYS A 41 ? ? -52.37 109.03 168 20 ARG A 44 ? ? -179.26 135.83 169 20 LYS A 49 ? ? 63.21 -163.20 170 20 ASN A 70 ? ? -52.03 103.18 171 20 ASP A 88 ? ? -105.53 51.07 172 20 SER A 95 ? ? -144.13 50.56 #