data_2DK6 # _entry.id 2DK6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DK6 pdb_00002dk6 10.2210/pdb2dk6/pdb RCSB RCSB025511 ? ? WWPDB D_1000025511 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DK6 _pdbx_database_status.recvd_initial_deposition_date 2006-04-06 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'He, F.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Shirouzu, M.' 5 'Terada, T.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of WWE domain in poly (ADP-ribose) polymerase family, member 11 (PARP 11)' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'He, F.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Shirouzu, M.' 5 ? primary 'Terada, T.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'PARP11 protein' _entity.formula_weight 11283.387 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'WWE domain' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGNEVDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVSSEDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQM NLTTGKQRLIKRAPFSSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGNEVDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVSSEDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQM NLTTGKQRLIKRAPFSSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ASN n 1 9 GLU n 1 10 VAL n 1 11 ASP n 1 12 ASP n 1 13 MET n 1 14 ASP n 1 15 THR n 1 16 SER n 1 17 ASP n 1 18 THR n 1 19 GLN n 1 20 TRP n 1 21 GLY n 1 22 TRP n 1 23 PHE n 1 24 TYR n 1 25 LEU n 1 26 ALA n 1 27 GLU n 1 28 CYS n 1 29 GLY n 1 30 LYS n 1 31 TRP n 1 32 HIS n 1 33 MET n 1 34 PHE n 1 35 GLN n 1 36 PRO n 1 37 ASP n 1 38 THR n 1 39 ASN n 1 40 SER n 1 41 GLN n 1 42 CYS n 1 43 SER n 1 44 VAL n 1 45 SER n 1 46 SER n 1 47 GLU n 1 48 ASP n 1 49 ILE n 1 50 GLU n 1 51 LYS n 1 52 SER n 1 53 PHE n 1 54 LYS n 1 55 THR n 1 56 ASN n 1 57 PRO n 1 58 CYS n 1 59 GLY n 1 60 SER n 1 61 ILE n 1 62 SER n 1 63 PHE n 1 64 THR n 1 65 THR n 1 66 SER n 1 67 LYS n 1 68 PHE n 1 69 SER n 1 70 TYR n 1 71 LYS n 1 72 ILE n 1 73 ASP n 1 74 PHE n 1 75 ALA n 1 76 GLU n 1 77 MET n 1 78 LYS n 1 79 GLN n 1 80 MET n 1 81 ASN n 1 82 LEU n 1 83 THR n 1 84 THR n 1 85 GLY n 1 86 LYS n 1 87 GLN n 1 88 ARG n 1 89 LEU n 1 90 ILE n 1 91 LYS n 1 92 ARG n 1 93 ALA n 1 94 PRO n 1 95 PHE n 1 96 SER n 1 97 SER n 1 98 GLY n 1 99 PRO n 1 100 SER n 1 101 SER n 1 102 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene PARP11 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050912-01 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code AAH31073 _struct_ref.pdbx_db_accession 21411376 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NEVDDMDTSDTQWGWFYLAECGKWHMFQPDTNSQCSVSSEDIEKSFKTNPCGSISFTTSKFSYKIDFAEMKQMNLTTGKQ RLIKRAPFS ; _struct_ref.pdbx_align_begin 15 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2DK6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 96 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 21411376 _struct_ref_seq.db_align_beg 15 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 103 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 96 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2DK6 GLY A 1 ? GB 21411376 ? ? 'cloning artifact' 1 1 1 2DK6 SER A 2 ? GB 21411376 ? ? 'cloning artifact' 2 2 1 2DK6 SER A 3 ? GB 21411376 ? ? 'cloning artifact' 3 3 1 2DK6 GLY A 4 ? GB 21411376 ? ? 'cloning artifact' 4 4 1 2DK6 SER A 5 ? GB 21411376 ? ? 'cloning artifact' 5 5 1 2DK6 SER A 6 ? GB 21411376 ? ? 'cloning artifact' 6 6 1 2DK6 GLY A 7 ? GB 21411376 ? ? 'cloning artifact' 7 7 1 2DK6 SER A 97 ? GB 21411376 ? ? 'cloning artifact' 97 8 1 2DK6 GLY A 98 ? GB 21411376 ? ? 'cloning artifact' 98 9 1 2DK6 PRO A 99 ? GB 21411376 ? ? 'cloning artifact' 99 10 1 2DK6 SER A 100 ? GB 21411376 ? ? 'cloning artifact' 100 11 1 2DK6 SER A 101 ? GB 21411376 ? ? 'cloning artifact' 101 12 1 2DK6 GLY A 102 ? GB 21411376 ? ? 'cloning artifact' 102 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents ;0.8mM U-15N, 13C; 20mM phosphate buffer NA; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O ; _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2DK6 _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2DK6 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the lowest energy, structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2DK6 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 2.6 Bruker 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9321 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2DK6 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2DK6 _struct.title 'Solution structure of WWE domain in poly (ADP-ribose) polymerase family, member 11 (PARP 11)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DK6 _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text ;structural genomics, WWE domain, PARP11, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, SIGNALING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id SER _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 46 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id THR _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 55 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id SER _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 46 _struct_conf.end_auth_comp_id THR _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 55 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 32 ? MET A 33 ? HIS A 32 MET A 33 A 2 TRP A 20 ? TYR A 24 ? TRP A 20 TYR A 24 A 3 GLN A 87 ? PRO A 94 ? GLN A 87 PRO A 94 A 4 LYS A 78 ? ASN A 81 ? LYS A 78 ASN A 81 A 5 SER A 69 ? ASP A 73 ? SER A 69 ASP A 73 A 6 SER A 60 ? THR A 64 ? SER A 60 THR A 64 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O HIS A 32 ? O HIS A 32 N TYR A 24 ? N TYR A 24 A 2 3 N GLY A 21 ? N GLY A 21 O ALA A 93 ? O ALA A 93 A 3 4 O ARG A 88 ? O ARG A 88 N GLN A 79 ? N GLN A 79 A 4 5 O MET A 80 ? O MET A 80 N LYS A 71 ? N LYS A 71 A 5 6 O PHE A 68 ? O PHE A 68 N THR A 65 ? N THR A 65 # _database_PDB_matrix.entry_id 2DK6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2DK6 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 MET 13 13 13 MET MET A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 TRP 20 20 20 TRP TRP A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 TRP 22 22 22 TRP TRP A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 CYS 28 28 28 CYS CYS A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 TRP 31 31 31 TRP TRP A . n A 1 32 HIS 32 32 32 HIS HIS A . n A 1 33 MET 33 33 33 MET MET A . n A 1 34 PHE 34 34 34 PHE PHE A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 THR 38 38 38 THR THR A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 CYS 42 42 42 CYS CYS A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 CYS 58 58 58 CYS CYS A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 LYS 67 67 67 LYS LYS A . n A 1 68 PHE 68 68 68 PHE PHE A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 TYR 70 70 70 TYR TYR A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 PHE 74 74 74 PHE PHE A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 MET 77 77 77 MET MET A . n A 1 78 LYS 78 78 78 LYS LYS A . n A 1 79 GLN 79 79 79 GLN GLN A . n A 1 80 MET 80 80 80 MET MET A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 THR 83 83 83 THR THR A . n A 1 84 THR 84 84 84 THR THR A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 ARG 88 88 88 ARG ARG A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 ARG 92 92 92 ARG ARG A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 PHE 95 95 95 PHE PHE A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 PRO 99 99 99 PRO PRO A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 GLY 102 102 102 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-04-24 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 650 ;HELIX DETERMINATION METHOD: AUTHOR DETERMINED ; 700 ;SHEET DETERMINATION METHOD: AUTHOR DETERMINED ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 13 ? ? 33.96 38.89 2 1 ASP A 17 ? ? -59.12 86.50 3 1 CYS A 42 ? ? -34.42 136.09 4 1 SER A 46 ? ? -49.20 -19.28 5 1 LYS A 51 ? ? -38.86 -39.02 6 1 PHE A 53 ? ? -38.22 -32.86 7 1 LYS A 91 ? ? -171.62 144.50 8 1 SER A 100 ? ? -44.57 93.26 9 2 SER A 2 ? ? -121.75 -59.28 10 2 THR A 15 ? ? 37.58 41.86 11 2 SER A 16 ? ? -105.20 78.87 12 2 ASP A 17 ? ? -43.13 102.95 13 2 CYS A 42 ? ? -53.85 -177.65 14 2 SER A 43 ? ? -106.42 -68.20 15 2 SER A 97 ? ? -100.55 43.25 16 3 SER A 2 ? ? -66.03 86.16 17 3 ASP A 14 ? ? -69.09 94.17 18 3 ASP A 17 ? ? -34.90 113.72 19 3 THR A 38 ? ? -45.97 157.11 20 3 CYS A 42 ? ? -38.79 154.52 21 3 THR A 65 ? ? -130.26 -67.80 22 3 LYS A 67 ? ? 32.64 35.12 23 3 SER A 96 ? ? -174.02 148.10 24 3 SER A 101 ? ? 35.14 42.74 25 4 THR A 38 ? ? -44.40 161.83 26 4 SER A 40 ? ? -57.71 -70.26 27 4 CYS A 42 ? ? -36.87 117.67 28 4 LYS A 67 ? ? 38.00 28.93 29 4 PHE A 95 ? ? -66.28 -70.75 30 4 PRO A 99 ? ? -69.76 -174.46 31 5 SER A 6 ? ? -36.61 119.61 32 5 ASN A 8 ? ? -120.89 -51.94 33 5 ASP A 11 ? ? -102.23 43.91 34 5 ASP A 17 ? ? -57.52 105.47 35 5 ASP A 37 ? ? -47.66 -70.19 36 5 GLN A 41 ? ? 36.62 40.78 37 5 SER A 43 ? ? -68.48 -179.53 38 5 SER A 46 ? ? -35.23 -38.14 39 5 SER A 66 ? ? -33.39 99.46 40 5 LYS A 67 ? ? 37.11 48.73 41 6 SER A 2 ? ? -160.03 112.48 42 6 SER A 3 ? ? -104.00 42.18 43 6 ASP A 17 ? ? -40.11 101.97 44 6 GLN A 35 ? ? -171.98 145.56 45 6 THR A 38 ? ? -36.62 154.54 46 6 SER A 40 ? ? -54.92 109.77 47 6 GLN A 41 ? ? 35.03 51.28 48 6 CYS A 42 ? ? -45.20 168.23 49 6 THR A 65 ? ? -175.34 133.34 50 6 SER A 66 ? ? 74.99 55.02 51 6 LYS A 67 ? ? 34.62 34.86 52 7 THR A 38 ? ? -46.93 165.25 53 7 CYS A 42 ? ? -37.89 116.64 54 7 GLU A 47 ? ? -63.64 -70.36 55 7 LYS A 67 ? ? 34.04 32.90 56 7 PHE A 95 ? ? -42.88 162.81 57 7 SER A 97 ? ? -34.84 143.57 58 7 SER A 101 ? ? 39.53 49.46 59 8 SER A 3 ? ? -49.93 151.31 60 8 ASN A 8 ? ? -36.61 150.28 61 8 PHE A 34 ? ? -34.73 127.50 62 8 THR A 38 ? ? -38.27 155.30 63 8 SER A 66 ? ? -34.09 -71.92 64 8 SER A 100 ? ? -48.31 103.06 65 9 SER A 16 ? ? -93.85 42.22 66 9 THR A 18 ? ? -55.58 102.98 67 9 CYS A 42 ? ? -34.00 141.89 68 9 LYS A 51 ? ? -36.70 -29.94 69 9 ASN A 56 ? ? -113.32 77.69 70 9 THR A 65 ? ? -133.81 -73.27 71 10 SER A 2 ? ? -97.41 42.12 72 10 SER A 6 ? ? -160.54 110.53 73 10 ASP A 12 ? ? -85.97 34.52 74 10 ASP A 14 ? ? -41.99 159.04 75 10 THR A 38 ? ? -49.18 166.27 76 10 THR A 65 ? ? -104.42 -74.96 77 10 SER A 66 ? ? -126.49 -72.57 78 10 PHE A 95 ? ? -68.26 92.85 79 10 SER A 101 ? ? -36.06 148.62 80 11 ASP A 17 ? ? -60.00 89.20 81 11 PHE A 34 ? ? -38.29 129.74 82 11 THR A 38 ? ? -105.40 -70.17 83 11 SER A 40 ? ? -35.48 -71.85 84 11 CYS A 42 ? ? 38.77 25.80 85 11 LYS A 51 ? ? -39.12 -29.17 86 11 ASN A 56 ? ? -116.41 74.95 87 11 LYS A 67 ? ? 46.26 29.93 88 12 ASN A 8 ? ? -40.24 157.99 89 12 ASP A 12 ? ? -48.07 171.93 90 12 THR A 15 ? ? -34.23 116.10 91 12 SER A 16 ? ? -56.16 -176.93 92 12 LEU A 25 ? ? -46.72 165.56 93 12 PHE A 34 ? ? -37.84 148.42 94 12 THR A 38 ? ? -33.42 148.47 95 12 SER A 40 ? ? -34.29 94.58 96 12 GLN A 41 ? ? 36.86 54.23 97 12 SER A 43 ? ? -49.69 179.21 98 12 THR A 65 ? ? -121.29 -58.48 99 12 SER A 66 ? ? -132.34 -73.29 100 12 PHE A 95 ? ? -39.13 135.49 101 12 PRO A 99 ? ? -69.74 93.37 102 13 VAL A 10 ? ? 34.12 52.82 103 13 ASP A 11 ? ? -50.82 173.92 104 13 SER A 16 ? ? -170.72 116.61 105 13 THR A 18 ? ? -47.67 99.90 106 13 SER A 43 ? ? -123.51 -63.18 107 13 SER A 46 ? ? -37.21 -37.98 108 13 THR A 65 ? ? -104.38 52.01 109 13 SER A 66 ? ? 39.94 25.43 110 13 LYS A 67 ? ? -134.63 -51.35 111 13 PHE A 95 ? ? -58.99 105.87 112 14 SER A 5 ? ? -90.79 42.02 113 14 ASP A 12 ? ? -46.52 170.58 114 14 ASP A 37 ? ? -46.17 89.88 115 14 SER A 40 ? ? -50.61 -75.79 116 14 GLU A 47 ? ? -53.51 -70.41 117 14 PHE A 95 ? ? -48.27 106.67 118 14 SER A 97 ? ? -173.59 117.53 119 15 ASP A 17 ? ? -34.33 110.53 120 15 SER A 46 ? ? -33.32 -35.97 121 15 SER A 66 ? ? -64.66 99.82 122 15 SER A 97 ? ? -50.34 98.63 123 16 MET A 13 ? ? -39.33 152.48 124 16 ASP A 37 ? ? -76.41 -71.97 125 16 GLN A 41 ? ? 37.15 28.34 126 16 CYS A 42 ? ? -55.03 -179.15 127 16 SER A 43 ? ? -68.42 -173.51 128 16 SER A 46 ? ? -34.77 -36.58 129 16 GLU A 50 ? ? -38.41 -33.14 130 16 SER A 66 ? ? -127.68 -68.10 131 17 SER A 5 ? ? -66.25 94.70 132 17 MET A 13 ? ? 34.46 41.25 133 17 ASP A 17 ? ? -69.38 94.61 134 17 ASP A 37 ? ? -37.62 102.31 135 17 SER A 40 ? ? -39.23 -74.12 136 17 GLN A 41 ? ? -119.65 56.02 137 17 CYS A 42 ? ? -33.75 99.06 138 17 ASP A 48 ? ? -58.17 -70.85 139 17 ASN A 56 ? ? -116.36 78.80 140 17 LYS A 67 ? ? 38.04 38.04 141 17 SER A 97 ? ? -89.00 43.55 142 18 ASN A 8 ? ? -57.47 175.62 143 18 THR A 15 ? ? -130.23 -44.01 144 18 PHE A 34 ? ? -34.84 144.45 145 18 THR A 38 ? ? -38.02 157.68 146 18 SER A 46 ? ? -34.48 -34.56 147 18 THR A 65 ? ? -79.46 -75.37 148 18 SER A 66 ? ? -122.72 -66.82 149 18 PHE A 95 ? ? -44.67 169.09 150 18 SER A 97 ? ? 38.63 42.38 151 19 SER A 3 ? ? -90.74 -61.86 152 19 ASP A 14 ? ? -91.76 55.05 153 19 THR A 18 ? ? -45.66 104.68 154 19 ASP A 37 ? ? -65.31 -71.27 155 19 SER A 40 ? ? -55.29 -75.09 156 19 GLN A 41 ? ? -90.67 34.05 157 19 CYS A 42 ? ? -33.19 135.06 158 19 SER A 43 ? ? -63.52 -174.31 159 19 SER A 46 ? ? -31.98 -35.98 160 19 ILE A 49 ? ? -33.12 -36.92 161 19 SER A 66 ? ? -35.98 102.76 162 19 LYS A 67 ? ? 37.99 46.27 163 19 SER A 101 ? ? 70.68 40.60 164 20 GLU A 9 ? ? -35.68 138.87 165 20 ASP A 37 ? ? -52.01 84.07 166 20 SER A 40 ? ? -56.07 -70.50 167 20 GLN A 41 ? ? -109.46 59.98 168 20 CYS A 42 ? ? -50.80 94.55 169 20 SER A 43 ? ? -174.85 -179.75 170 20 ASP A 48 ? ? -43.89 -71.11 171 20 LYS A 51 ? ? -36.48 -38.14 172 20 THR A 65 ? ? -132.89 -48.62 173 20 LYS A 67 ? ? 38.19 27.79 174 20 PRO A 99 ? ? -69.75 99.53 #