HEADER OXIDOREDUCTASE 11-APR-06 2DKI TITLE CRYSTAL STRUCTURE OF 3-HYDROXYBENZOATE HYDROXYLASE FROM COMAMONAS TITLE 2 TESTOSTERONI, UNDER PRESSURE OF XENON GAS (12 ATM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-HYDROXYBENZOATE HYDROXYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: M-HYDROXYBENZOATE HYDROXYLASE; COMPND 5 EC: 1.14.13.23 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COMAMONAS TESTOSTERONI; SOURCE 3 ORGANISM_TAXID: 285; SOURCE 4 STRAIN: KH122-3S KEYWDS 3-HYDROXYBENZOATE HYDROXYLASE, FLAVOPROTEIN, MONOOXYGENASE, XENON KEYWDS 2 DERIVATIVE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR T.HIROMOTO,S.FUJIWARA,K.HOSOKAWA,H.YAMAGUCHI REVDAT 6 25-OCT-23 2DKI 1 REMARK REVDAT 5 13-JUL-11 2DKI 1 VERSN REVDAT 4 24-FEB-09 2DKI 1 VERSN REVDAT 3 01-JAN-08 2DKI 1 JRNL REVDAT 2 21-NOV-06 2DKI 1 DBREF REMARK SEQADV JRNL REVDAT 1 24-OCT-06 2DKI 0 JRNL AUTH T.HIROMOTO,S.FUJIWARA,K.HOSOKAWA,H.YAMAGUCHI JRNL TITL CRYSTAL STRUCTURE OF 3-HYDROXYBENZOATE HYDROXYLASE FROM JRNL TITL 2 COMAMONAS TESTOSTERONI HAS A LARGE TUNNEL FOR SUBSTRATE AND JRNL TITL 3 OXYGEN ACCESS TO THE ACTIVE SITE JRNL REF J.MOL.BIOL. V. 364 878 2006 JRNL REFN ISSN 0022-2836 JRNL PMID 17045293 JRNL DOI 10.1016/J.JMB.2006.09.031 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.001 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1975911.150 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 25332 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2508 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.66 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3731 REMARK 3 BIN R VALUE (WORKING SET) : 0.2100 REMARK 3 BIN FREE R VALUE : 0.3070 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 411 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.015 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4796 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 71 REMARK 3 SOLVENT ATOMS : 380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.92000 REMARK 3 B22 (A**2) : 3.38000 REMARK 3 B33 (A**2) : -7.30000 REMARK 3 B12 (A**2) : 3.92000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM SIGMAA (A) : 0.16 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.29 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.850 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 3.370 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 4.670 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 5.250 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 6.540 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.41 REMARK 3 BSOL : 51.46 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : FAD_14.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : FAD_14.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DKI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000025522. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-18B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : FIXED-EXIT DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR WITH GE(111) REMARK 200 CRYSTALS REMARK 200 OPTICS : PT-COATED BENT CYLINDRICAL REMARK 200 MIRROR OF FUSED QUARTZ REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25436 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.70 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : 0.07700 REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.00 REMARK 200 R MERGE FOR SHELL (I) : 0.28400 REMARK 200 R SYM FOR SHELL (I) : 0.27100 REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 2DKH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES, 1.3M AMMONIUM SULFATE, 6% REMARK 280 1,4-DIOXANE, PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 149.87333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 74.93667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 74.93667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 149.87333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 10230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 46010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -125.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 127.61750 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 74.93667 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 984 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 276 REMARK 465 LEU A 277 REMARK 465 ASP A 278 REMARK 465 ALA A 279 REMARK 465 ASP A 280 REMARK 465 GLU A 281 REMARK 465 ARG A 282 REMARK 465 VAL A 283 REMARK 465 ALA A 284 REMARK 465 SER A 285 REMARK 465 MET A 413 REMARK 465 PHE A 414 REMARK 465 SER A 415 REMARK 465 ASP A 416 REMARK 465 PRO A 417 REMARK 465 ALA A 418 REMARK 465 LYS A 419 REMARK 465 GLU A 420 REMARK 465 GLY A 421 REMARK 465 GLY A 422 REMARK 465 GLN A 423 REMARK 465 GLY A 424 REMARK 465 GLY A 425 REMARK 465 VAL A 426 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 40 49.03 -98.65 REMARK 500 ASP A 75 -13.70 -148.88 REMARK 500 HIS A 173 10.36 -64.60 REMARK 500 ALA A 192 125.81 -31.55 REMARK 500 ARG A 210 32.57 -99.80 REMARK 500 ALA A 226 101.67 -57.99 REMARK 500 SER A 315 -161.91 -162.95 REMARK 500 PRO A 337 -15.68 -49.74 REMARK 500 HIS A 352 122.34 -171.36 REMARK 500 SER A 452 -158.66 -167.43 REMARK 500 ALA A 458 33.54 70.57 REMARK 500 ALA A 464 74.97 -150.45 REMARK 500 ASP A 483 11.83 -142.63 REMARK 500 PHE A 636 -12.86 -146.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 641 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 642 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 643 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 640 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE XE A 645 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE XE A 646 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2DKH RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX WITH THE SUBSTRATE DBREF 2DKI A 1 639 UNP Q05KQ5 Q05KQ5_COMTE 1 639 SEQRES 1 A 639 MET GLN PHE HIS LEU ASN GLY PHE ARG PRO GLY ASN PRO SEQRES 2 A 639 LEU ILE ALA PRO ALA SER PRO LEU ALA PRO ALA HIS THR SEQRES 3 A 639 GLU ALA VAL PRO SER GLN VAL ASP VAL LEU ILE VAL GLY SEQRES 4 A 639 CYS GLY PRO ALA GLY LEU THR LEU ALA ALA GLN LEU ALA SEQRES 5 A 639 ALA PHE PRO ASP ILE ARG THR CYS ILE VAL GLU GLN LYS SEQRES 6 A 639 GLU GLY PRO MET GLU LEU GLY GLN ALA ASP GLY ILE ALA SEQRES 7 A 639 CYS ARG THR MET GLU MET PHE GLU ALA PHE GLU PHE ALA SEQRES 8 A 639 ASP SER ILE LEU LYS GLU ALA CYS TRP ILE ASN ASP VAL SEQRES 9 A 639 THR PHE TRP LYS PRO ASP PRO GLY GLN PRO GLY ARG ILE SEQRES 10 A 639 ALA ARG HIS GLY ARG VAL GLN ASP THR GLU ASP GLY LEU SEQRES 11 A 639 SER GLU PHE PRO HIS VAL ILE LEU ASN GLN ALA ARG VAL SEQRES 12 A 639 HIS ASP HIS TYR LEU GLU ARG MET ARG ASN SER PRO SER SEQRES 13 A 639 ARG LEU GLU PRO HIS TYR ALA ARG ARG VAL LEU ASP VAL SEQRES 14 A 639 LYS VAL ASP HIS GLY ALA ALA ASP TYR PRO VAL THR VAL SEQRES 15 A 639 THR LEU GLU ARG CYS ASP ALA ALA HIS ALA GLY GLN ILE SEQRES 16 A 639 GLU THR VAL GLN ALA ARG TYR VAL VAL GLY CYS ASP GLY SEQRES 17 A 639 ALA ARG SER ASN VAL ARG ARG ALA ILE GLY ARG GLN LEU SEQRES 18 A 639 VAL GLY ASP SER ALA ASN GLN ALA TRP GLY VAL MET ASP SEQRES 19 A 639 VAL LEU ALA VAL THR ASP PHE PRO ASP VAL ARG TYR LYS SEQRES 20 A 639 VAL ALA ILE GLN SER GLU GLN GLY ASN VAL LEU ILE ILE SEQRES 21 A 639 PRO ARG GLU GLY GLY HIS LEU VAL ARG PHE TYR VAL GLU SEQRES 22 A 639 MET ASP LYS LEU ASP ALA ASP GLU ARG VAL ALA SER ARG SEQRES 23 A 639 ASN ILE THR VAL GLU GLN LEU ILE ALA THR ALA GLN ARG SEQRES 24 A 639 VAL LEU HIS PRO TYR LYS LEU GLU VAL LYS ASN VAL PRO SEQRES 25 A 639 TRP TRP SER VAL TYR GLU ILE GLY GLN ARG ILE CYS ALA SEQRES 26 A 639 LYS TYR ASP ASP VAL VAL ASP ALA VAL ALA THR PRO ASP SEQRES 27 A 639 SER PRO LEU PRO ARG VAL PHE ILE ALA GLY ASP ALA CYS SEQRES 28 A 639 HIS THR HIS SER PRO LYS ALA GLY GLN GLY MET ASN PHE SEQRES 29 A 639 SER MET GLN ASP SER PHE ASN LEU GLY TRP LYS LEU ALA SEQRES 30 A 639 ALA VAL LEU ARG LYS GLN CYS ALA PRO GLU LEU LEU HIS SEQRES 31 A 639 THR TYR SER SER GLU ARG GLN VAL VAL ALA GLN GLN LEU SEQRES 32 A 639 ILE ASP PHE ASP ARG GLU TRP ALA LYS MET PHE SER ASP SEQRES 33 A 639 PRO ALA LYS GLU GLY GLY GLN GLY GLY VAL ASP PRO LYS SEQRES 34 A 639 GLU PHE GLN LYS TYR PHE GLU GLN HIS GLY ARG PHE THR SEQRES 35 A 639 ALA GLY VAL GLY THR HIS TYR ALA PRO SER LEU LEU THR SEQRES 36 A 639 GLY GLN ALA LYS HIS GLN ALA LEU ALA SER GLY PHE THR SEQRES 37 A 639 VAL GLY MET ARG PHE HIS SER ALA PRO VAL VAL ARG VAL SEQRES 38 A 639 CYS ASP ALA LYS PRO VAL GLN LEU GLY HIS CYS GLY LYS SEQRES 39 A 639 ALA ASP GLY ARG TRP ARG LEU TYR ALA PHE ALA ALA GLN SEQRES 40 A 639 ASN ASP LEU ALA GLN PRO GLU SER GLY LEU LEU ALA LEU SEQRES 41 A 639 CYS ARG PHE LEU GLU GLY ASP ALA ALA SER PRO LEU ARG SEQRES 42 A 639 ARG PHE THR PRO ALA GLY GLN ASP ILE ASP SER ILE PHE SEQRES 43 A 639 ASP LEU ARG ALA VAL PHE PRO GLN ALA TYR THR GLU VAL SEQRES 44 A 639 ALA LEU GLU THR LEU PRO ALA LEU LEU LEU PRO PRO LYS SEQRES 45 A 639 GLY GLN LEU GLY MET ILE ASP TYR GLU LYS VAL PHE SER SEQRES 46 A 639 PRO ASP LEU LYS ASN ALA GLY GLN ASP ILE PHE GLU LEU SEQRES 47 A 639 ARG GLY ILE ASP ARG GLN GLN GLY ALA LEU VAL VAL VAL SEQRES 48 A 639 ARG PRO ASP GLN TYR VAL ALA GLN VAL LEU PRO LEU GLY SEQRES 49 A 639 ASP HIS ALA ALA LEU SER ALA TYR PHE GLU SER PHE MET SEQRES 50 A 639 ARG ALA HET SO4 A 641 5 HET SO4 A 642 5 HET SO4 A 643 5 HET FAD A 640 53 HET XE A 644 1 HET XE A 645 1 HET XE A 646 1 HETNAM SO4 SULFATE ION HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM XE XENON FORMUL 2 SO4 3(O4 S 2-) FORMUL 5 FAD C27 H33 N9 O15 P2 FORMUL 6 XE 3(XE) FORMUL 9 HOH *380(H2 O) HELIX 1 1 GLY A 41 ALA A 52 1 12 HELIX 2 2 ALA A 78 PHE A 88 1 11 HELIX 3 3 PHE A 90 ALA A 98 1 9 HELIX 4 4 ASN A 139 SER A 154 1 16 HELIX 5 5 SER A 211 ILE A 217 1 7 HELIX 6 6 THR A 289 HIS A 302 1 14 HELIX 7 7 GLY A 348 ALA A 350 5 3 HELIX 8 8 SER A 355 GLY A 359 5 5 HELIX 9 9 MET A 362 ARG A 381 1 20 HELIX 10 10 ALA A 385 LEU A 388 5 4 HELIX 11 11 LEU A 389 TRP A 410 1 22 HELIX 12 12 ASP A 427 ALA A 443 1 17 HELIX 13 13 HIS A 460 SER A 465 5 6 HELIX 14 14 GLY A 490 GLY A 493 5 4 HELIX 15 15 SER A 515 ASP A 527 1 13 HELIX 16 16 SER A 530 THR A 536 1 7 HELIX 17 17 ALA A 555 VAL A 559 5 5 HELIX 18 18 ALA A 560 LEU A 564 5 5 HELIX 19 19 PRO A 565 LEU A 569 5 5 HELIX 20 20 ASP A 594 ARG A 599 1 6 HELIX 21 21 ASP A 625 SER A 635 1 11 SHEET 1 A 5 THR A 59 VAL A 62 0 SHEET 2 A 5 GLN A 32 VAL A 38 1 N ILE A 37 O CYS A 60 SHEET 3 A 5 ILE A 195 GLY A 205 1 O VAL A 204 N LEU A 36 SHEET 4 A 5 VAL A 180 ARG A 186 -1 N LEU A 184 O GLU A 196 SHEET 5 A 5 ARG A 164 VAL A 171 -1 N ASP A 168 O THR A 183 SHEET 1 B 4 THR A 59 VAL A 62 0 SHEET 2 B 4 GLN A 32 VAL A 38 1 N ILE A 37 O CYS A 60 SHEET 3 B 4 ILE A 195 GLY A 205 1 O VAL A 204 N LEU A 36 SHEET 4 B 4 VAL A 344 ILE A 346 1 O PHE A 345 N GLY A 205 SHEET 1 C 3 GLY A 76 ILE A 77 0 SHEET 2 C 3 HIS A 135 ILE A 137 -1 O VAL A 136 N ILE A 77 SHEET 3 C 3 CYS A 99 ILE A 101 -1 N CYS A 99 O ILE A 137 SHEET 1 D 7 ILE A 117 GLN A 124 0 SHEET 2 D 7 ASP A 103 PRO A 109 -1 N PHE A 106 O HIS A 120 SHEET 3 D 7 LYS A 247 SER A 252 1 O GLN A 251 N TRP A 107 SHEET 4 D 7 GLY A 255 PRO A 261 -1 O ILE A 259 N VAL A 248 SHEET 5 D 7 VAL A 268 MET A 274 -1 O ARG A 269 N ILE A 260 SHEET 6 D 7 ALA A 229 THR A 239 -1 N GLY A 231 O VAL A 272 SHEET 7 D 7 LEU A 306 TYR A 317 -1 O TRP A 313 N ASP A 234 SHEET 1 E 3 VAL A 222 GLY A 223 0 SHEET 2 E 3 ARG A 322 ILE A 323 -1 O ILE A 323 N VAL A 222 SHEET 3 E 3 HIS A 352 THR A 353 -1 O THR A 353 N ARG A 322 SHEET 1 F 7 PRO A 486 GLN A 488 0 SHEET 2 F 7 PRO A 477 ARG A 480 -1 N VAL A 478 O VAL A 487 SHEET 3 F 7 VAL A 583 SER A 585 -1 O SER A 585 N VAL A 479 SHEET 4 F 7 PHE A 546 VAL A 551 1 N ALA A 550 O PHE A 584 SHEET 5 F 7 TRP A 499 PHE A 504 1 N TRP A 499 O ASP A 547 SHEET 6 F 7 ALA A 607 VAL A 611 -1 O VAL A 611 N ARG A 500 SHEET 7 F 7 VAL A 617 LEU A 621 -1 O ALA A 618 N VAL A 610 SHEET 1 G 2 PRO A 571 LYS A 572 0 SHEET 2 G 2 MET A 577 ILE A 578 -1 O MET A 577 N LYS A 572 CISPEP 1 HIS A 302 PRO A 303 0 0.42 SITE 1 AC1 7 PHE A 3 HIS A 4 LEU A 5 ARG A 9 SITE 2 AC1 7 HOH A 701 HOH A 848 HOH A 972 SITE 1 AC2 4 VAL A 487 GLN A 488 HIS A 491 HOH A 824 SITE 1 AC3 7 GLY A 456 GLN A 457 ALA A 458 LYS A 459 SITE 2 AC3 7 HOH A 657 HOH A 792 HOH A 999 SITE 1 AC4 26 GLY A 39 GLY A 41 PRO A 42 ALA A 43 SITE 2 AC4 26 GLU A 63 GLN A 64 GLN A 73 ARG A 164 SITE 3 AC4 26 ARG A 165 VAL A 166 CYS A 206 ASP A 207 SITE 4 AC4 26 GLY A 208 ASN A 212 ARG A 269 TYR A 271 SITE 5 AC4 26 SER A 315 TYR A 317 GLY A 348 ASP A 349 SITE 6 AC4 26 GLY A 361 SER A 365 HOH A 649 HOH A 913 SITE 7 AC4 26 HOH A 925 HOH A 967 SITE 1 AC5 3 LEU A 501 PRO A 531 PHE A 546 SITE 1 AC6 3 GLN A 457 ALA A 458 HOH A 962 CRYST1 73.680 73.680 224.810 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013572 0.007836 0.000000 0.00000 SCALE2 0.000000 0.015672 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004448 0.00000