HEADER SIGNALING PROTEIN 14-APR-06 2DKZ TITLE SOLUTION STRUCTURE OF THE SAM_PNT-DOMAIN OF THE HYPOTHETICAL PROTEIN TITLE 2 LOC64762 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN LOC64762; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SAM_PNT DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: COL07333; SOURCE 6 EXPRESSION_SYSTEM: CELL FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P050822-11; SOURCE 9 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS CELL-FREE PROTEIN SYNTHESIS, PROTEIN REGULATION, STRUCTURAL GENOMICS, KEYWDS 2 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.K.GORONCY,M.SATO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2DKZ 1 REMARK SEQADV REVDAT 2 24-FEB-09 2DKZ 1 VERSN REVDAT 1 14-OCT-06 2DKZ 0 JRNL AUTH A.K.GORONCY,M.SATO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE SAM_PNT-DOMAIN OF THE HYPOTHETICAL JRNL TITL 2 PROTEIN LOC64762 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.2.1 REMARK 3 AUTHORS : P.GUNTERT ET AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DKZ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-APR-06. REMARK 100 THE DEPOSITION ID IS D_1000025539. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.13MM SAM_PNT DOMAIN, 20MM D REMARK 210 -TRIS-HCL, 100MM NACL, 1MM D-DTT, REMARK 210 0.02% NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.2.1, XWINNMR 3.5, REMARK 210 NMRPIPE 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.899A REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 3 -178.91 62.98 REMARK 500 1 PRO A 12 -172.55 -69.77 REMARK 500 1 SER A 16 73.73 -109.00 REMARK 500 1 ASP A 61 -72.82 -76.70 REMARK 500 1 SER A 83 75.06 55.24 REMARK 500 2 SER A 2 84.59 -164.75 REMARK 500 2 LEU A 15 32.63 -97.24 REMARK 500 2 ASP A 61 -73.67 -76.00 REMARK 500 2 PRO A 81 81.00 -69.79 REMARK 500 3 SER A 6 -62.96 -93.09 REMARK 500 3 PRO A 12 -178.19 -69.74 REMARK 500 3 ASP A 61 -73.74 -81.63 REMARK 500 4 SER A 2 -174.54 59.60 REMARK 500 4 SER A 3 -72.69 -81.78 REMARK 500 4 SER A 6 90.39 -171.42 REMARK 500 4 PRO A 12 -177.16 -69.78 REMARK 500 4 ASP A 14 -42.40 -138.30 REMARK 500 4 SER A 16 75.94 -113.51 REMARK 500 4 LEU A 64 178.38 -59.98 REMARK 500 4 PRO A 81 90.65 -69.79 REMARK 500 4 SER A 82 61.94 -166.21 REMARK 500 5 SER A 6 45.47 -94.25 REMARK 500 5 PRO A 12 -175.31 -69.72 REMARK 500 5 ASP A 61 -74.55 -83.17 REMARK 500 5 SER A 82 77.07 56.09 REMARK 500 6 SER A 3 -50.37 -121.44 REMARK 500 6 PRO A 12 -178.62 -69.71 REMARK 500 6 ASP A 14 -42.31 -137.34 REMARK 500 6 ASP A 61 -73.82 -76.71 REMARK 500 6 LEU A 64 -179.37 -61.16 REMARK 500 6 SER A 79 101.56 -59.13 REMARK 500 6 PRO A 81 -171.05 -69.70 REMARK 500 6 SER A 83 -60.87 -145.56 REMARK 500 7 SER A 2 88.17 57.88 REMARK 500 7 PRO A 12 -175.19 -69.78 REMARK 500 7 LEU A 15 43.25 -93.16 REMARK 500 7 ASP A 61 -74.44 -81.52 REMARK 500 7 SER A 83 174.85 60.88 REMARK 500 8 SER A 5 -67.53 -140.59 REMARK 500 8 ASP A 61 -73.97 -73.87 REMARK 500 8 PRO A 81 99.35 -69.81 REMARK 500 9 SER A 3 -59.57 -155.87 REMARK 500 10 SER A 3 -42.48 -138.53 REMARK 500 10 PRO A 12 -177.01 -69.75 REMARK 500 10 ASP A 61 -72.67 -85.94 REMARK 500 10 LEU A 64 -179.86 -66.76 REMARK 500 10 PRO A 81 80.62 -69.72 REMARK 500 10 SER A 83 65.20 60.75 REMARK 500 11 PRO A 12 -179.86 -69.77 REMARK 500 11 ASP A 14 -41.54 -134.39 REMARK 500 REMARK 500 THIS ENTRY HAS 96 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSS001001067.1 RELATED DB: TARGETDB DBREF 2DKZ A 8 78 UNP Q9BSF5 Q9BSF5_HUMAN 702 772 SEQADV 2DKZ GLY A 1 UNP Q9BSF5 CLONING ARTIFACT SEQADV 2DKZ SER A 2 UNP Q9BSF5 CLONING ARTIFACT SEQADV 2DKZ SER A 3 UNP Q9BSF5 CLONING ARTIFACT SEQADV 2DKZ GLY A 4 UNP Q9BSF5 CLONING ARTIFACT SEQADV 2DKZ SER A 5 UNP Q9BSF5 CLONING ARTIFACT SEQADV 2DKZ SER A 6 UNP Q9BSF5 CLONING ARTIFACT SEQADV 2DKZ GLY A 7 UNP Q9BSF5 CLONING ARTIFACT SEQADV 2DKZ SER A 79 UNP Q9BSF5 CLONING ARTIFACT SEQADV 2DKZ GLY A 80 UNP Q9BSF5 CLONING ARTIFACT SEQADV 2DKZ PRO A 81 UNP Q9BSF5 CLONING ARTIFACT SEQADV 2DKZ SER A 82 UNP Q9BSF5 CLONING ARTIFACT SEQADV 2DKZ SER A 83 UNP Q9BSF5 CLONING ARTIFACT SEQADV 2DKZ GLY A 84 UNP Q9BSF5 CLONING ARTIFACT SEQRES 1 A 84 GLY SER SER GLY SER SER GLY PRO TRP GLN PRO PRO ALA SEQRES 2 A 84 ASP LEU SER GLY LEU SER ILE GLU GLU VAL SER LYS SER SEQRES 3 A 84 LEU ARG PHE ILE GLY LEU SER GLU ASP VAL ILE SER PHE SEQRES 4 A 84 PHE VAL THR GLU LYS ILE ASP GLY ASN LEU LEU VAL GLN SEQRES 5 A 84 LEU THR GLU GLU ILE LEU SER GLU ASP PHE LYS LEU SER SEQRES 6 A 84 LYS LEU GLN VAL LYS LYS ILE MET GLN PHE ILE ASN GLY SEQRES 7 A 84 SER GLY PRO SER SER GLY HELIX 1 1 SER A 19 LEU A 27 1 9 HELIX 2 2 ARG A 28 ILE A 30 5 3 HELIX 3 3 SER A 33 THR A 42 1 10 HELIX 4 4 ASP A 46 LEU A 53 1 8 HELIX 5 5 THR A 54 ASP A 61 1 8 HELIX 6 6 SER A 65 GLY A 78 1 14 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1