data_2DLB # _entry.id 2DLB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DLB pdb_00002dlb 10.2210/pdb2dlb/pdb RCSB RCSB025550 ? ? WWPDB D_1000025550 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-04-25 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-10-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_entry_details 5 4 'Structure model' pdbx_modification_feature 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DLB _pdbx_database_status.recvd_initial_deposition_date 2006-04-18 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id SR412 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kuzin, A.P.' 1 'Chen, Y.' 2 'Seetharaman, J.' 3 'Ho, C.-K.' 4 'Cunningham, K.' 5 'Janjua, H.' 6 'Conover, K.' 7 'Ma, L.-C.' 8 'Xiao, R.' 9 'Acton, T.B.' 10 'Montelione, G.T.' 11 'Hunt, J.F.' 12 'Tong, L.' 13 'Northeast Structural Genomics Consortium (NESG)' 14 # _citation.id primary _citation.title 'X-ray structure of hypothetical protein from Bacillus subtilis O34498 at the resolution of 1.2A. NESG target SR412' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kuzin, A.P.' 1 ? primary 'Chen, Y.' 2 ? primary 'Seetharaman, J.' 3 ? primary 'Ho, C.-K.' 4 ? primary 'Cunningham, K.' 5 ? primary 'Janjua, H.' 6 ? primary 'Conover, K.' 7 ? primary 'Ma, L.-C.' 8 ? primary 'Xiao, R.' 9 ? primary 'Acton, T.B.' 10 ? primary 'Montelione, G.T.' 11 ? primary 'Hunt, J.F.' 12 ? primary 'Tong, L.' 13 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man yopT 9249.060 2 ? ? ? ? 2 water nat water 18.015 180 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)AGYLNNIALNLEIVLKNKADSPEVSETLVTRICENLLLSKEVSFLKADGSVENFKLSD(MSE)EYEITNTEELPE LEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can MAGYLNNIALNLEIVLKNKADSPEVSETLVTRICENLLLSKEVSFLKADGSVENFKLSDMEYEITNTEELPELEHHHHHH _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier SR412 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 ALA n 1 3 GLY n 1 4 TYR n 1 5 LEU n 1 6 ASN n 1 7 ASN n 1 8 ILE n 1 9 ALA n 1 10 LEU n 1 11 ASN n 1 12 LEU n 1 13 GLU n 1 14 ILE n 1 15 VAL n 1 16 LEU n 1 17 LYS n 1 18 ASN n 1 19 LYS n 1 20 ALA n 1 21 ASP n 1 22 SER n 1 23 PRO n 1 24 GLU n 1 25 VAL n 1 26 SER n 1 27 GLU n 1 28 THR n 1 29 LEU n 1 30 VAL n 1 31 THR n 1 32 ARG n 1 33 ILE n 1 34 CYS n 1 35 GLU n 1 36 ASN n 1 37 LEU n 1 38 LEU n 1 39 LEU n 1 40 SER n 1 41 LYS n 1 42 GLU n 1 43 VAL n 1 44 SER n 1 45 PHE n 1 46 LEU n 1 47 LYS n 1 48 ALA n 1 49 ASP n 1 50 GLY n 1 51 SER n 1 52 VAL n 1 53 GLU n 1 54 ASN n 1 55 PHE n 1 56 LYS n 1 57 LEU n 1 58 SER n 1 59 ASP n 1 60 MSE n 1 61 GLU n 1 62 TYR n 1 63 GLU n 1 64 ILE n 1 65 THR n 1 66 ASN n 1 67 THR n 1 68 GLU n 1 69 GLU n 1 70 LEU n 1 71 PRO n 1 72 GLU n 1 73 LEU n 1 74 GLU n 1 75 HIS n 1 76 HIS n 1 77 HIS n 1 78 HIS n 1 79 HIS n 1 80 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Bacillus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1423 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)+Magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pE21 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 2001 ? ? ? A . n A 1 2 ALA 2 2002 2002 ALA ALA A . n A 1 3 GLY 3 2003 2003 GLY GLY A . n A 1 4 TYR 4 2004 2004 TYR TYR A . n A 1 5 LEU 5 2005 2005 LEU LEU A . n A 1 6 ASN 6 2006 2006 ASN ASN A . n A 1 7 ASN 7 2007 2007 ASN ASN A . n A 1 8 ILE 8 2008 2008 ILE ILE A . n A 1 9 ALA 9 2009 2009 ALA ALA A . n A 1 10 LEU 10 2010 2010 LEU LEU A . n A 1 11 ASN 11 2011 2011 ASN ASN A . n A 1 12 LEU 12 2012 2012 LEU LEU A . n A 1 13 GLU 13 2013 2013 GLU GLU A . n A 1 14 ILE 14 2014 2014 ILE ILE A . n A 1 15 VAL 15 2015 2015 VAL VAL A . n A 1 16 LEU 16 2016 2016 LEU LEU A . n A 1 17 LYS 17 2017 2017 LYS LYS A . n A 1 18 ASN 18 2018 2018 ASN ASN A . n A 1 19 LYS 19 2019 2019 LYS LYS A . n A 1 20 ALA 20 2020 2020 ALA ALA A . n A 1 21 ASP 21 2021 2021 ASP ASP A . n A 1 22 SER 22 2022 2022 SER SER A . n A 1 23 PRO 23 2023 2023 PRO PRO A . n A 1 24 GLU 24 2024 2024 GLU GLU A . n A 1 25 VAL 25 2025 2025 VAL VAL A . n A 1 26 SER 26 2026 2026 SER SER A . n A 1 27 GLU 27 2027 2027 GLU GLU A . n A 1 28 THR 28 2028 2028 THR THR A . n A 1 29 LEU 29 2029 2029 LEU LEU A . n A 1 30 VAL 30 2030 2030 VAL VAL A . n A 1 31 THR 31 2031 2031 THR THR A . n A 1 32 ARG 32 2032 2032 ARG ARG A . n A 1 33 ILE 33 2033 2033 ILE ILE A . n A 1 34 CYS 34 2034 2034 CYS CYS A . n A 1 35 GLU 35 2035 2035 GLU GLU A . n A 1 36 ASN 36 2036 2036 ASN ASN A . n A 1 37 LEU 37 2037 2037 LEU LEU A . n A 1 38 LEU 38 2038 2038 LEU LEU A . n A 1 39 LEU 39 2039 2039 LEU LEU A . n A 1 40 SER 40 2040 2040 SER SER A . n A 1 41 LYS 41 2041 2041 LYS LYS A . n A 1 42 GLU 42 2042 2042 GLU GLU A . n A 1 43 VAL 43 2043 2043 VAL VAL A . n A 1 44 SER 44 2044 2044 SER SER A . n A 1 45 PHE 45 2045 2045 PHE PHE A . n A 1 46 LEU 46 2046 2046 LEU LEU A . n A 1 47 LYS 47 2047 2047 LYS LYS A . n A 1 48 ALA 48 2048 2048 ALA ALA A . n A 1 49 ASP 49 2049 2049 ASP ASP A . n A 1 50 GLY 50 2050 2050 GLY GLY A . n A 1 51 SER 51 2051 2051 SER SER A . n A 1 52 VAL 52 2052 2052 VAL VAL A . n A 1 53 GLU 53 2053 2053 GLU GLU A . n A 1 54 ASN 54 2054 2054 ASN ASN A . n A 1 55 PHE 55 2055 2055 PHE PHE A . n A 1 56 LYS 56 2056 2056 LYS LYS A . n A 1 57 LEU 57 2057 2057 LEU LEU A . n A 1 58 SER 58 2058 2058 SER SER A . n A 1 59 ASP 59 2059 2059 ASP ASP A . n A 1 60 MSE 60 2060 2060 MSE MSE A . n A 1 61 GLU 61 2061 2061 GLU GLU A . n A 1 62 TYR 62 2062 2062 TYR TYR A . n A 1 63 GLU 63 2063 2063 GLU GLU A . n A 1 64 ILE 64 2064 2064 ILE ILE A . n A 1 65 THR 65 2065 2065 THR THR A . n A 1 66 ASN 66 2066 2066 ASN ASN A . n A 1 67 THR 67 2067 2067 THR THR A . n A 1 68 GLU 68 2068 2068 GLU GLU A . n A 1 69 GLU 69 2069 2069 GLU GLU A . n A 1 70 LEU 70 2070 2070 LEU LEU A . n A 1 71 PRO 71 2071 2071 PRO PRO A . n A 1 72 GLU 72 2072 ? ? ? A . n A 1 73 LEU 73 2073 ? ? ? A . n A 1 74 GLU 74 2074 ? ? ? A . n A 1 75 HIS 75 2075 ? ? ? A . n A 1 76 HIS 76 2076 ? ? ? A . n A 1 77 HIS 77 2077 ? ? ? A . n A 1 78 HIS 78 2078 ? ? ? A . n A 1 79 HIS 79 2079 ? ? ? A . n A 1 80 HIS 80 2080 ? ? ? A . n B 1 1 MSE 1 4001 ? ? ? B . n B 1 2 ALA 2 4002 4002 ALA ALA B . n B 1 3 GLY 3 4003 4003 GLY GLY B . n B 1 4 TYR 4 4004 4004 TYR TYR B . n B 1 5 LEU 5 4005 4005 LEU LEU B . n B 1 6 ASN 6 4006 4006 ASN ASN B . n B 1 7 ASN 7 4007 4007 ASN ASN B . n B 1 8 ILE 8 4008 4008 ILE ILE B . n B 1 9 ALA 9 4009 4009 ALA ALA B . n B 1 10 LEU 10 4010 4010 LEU LEU B . n B 1 11 ASN 11 4011 4011 ASN ASN B . n B 1 12 LEU 12 4012 4012 LEU LEU B . n B 1 13 GLU 13 4013 4013 GLU GLU B . n B 1 14 ILE 14 4014 4014 ILE ILE B . n B 1 15 VAL 15 4015 4015 VAL VAL B . n B 1 16 LEU 16 4016 4016 LEU LEU B . n B 1 17 LYS 17 4017 4017 LYS LYS B . n B 1 18 ASN 18 4018 4018 ASN ASN B . n B 1 19 LYS 19 4019 4019 LYS LYS B . n B 1 20 ALA 20 4020 4020 ALA ALA B . n B 1 21 ASP 21 4021 4021 ASP ASP B . n B 1 22 SER 22 4022 4022 SER SER B . n B 1 23 PRO 23 4023 4023 PRO PRO B . n B 1 24 GLU 24 4024 4024 GLU GLU B . n B 1 25 VAL 25 4025 4025 VAL VAL B . n B 1 26 SER 26 4026 4026 SER SER B . n B 1 27 GLU 27 4027 4027 GLU GLU B . n B 1 28 THR 28 4028 4028 THR THR B . n B 1 29 LEU 29 4029 4029 LEU LEU B . n B 1 30 VAL 30 4030 4030 VAL VAL B . n B 1 31 THR 31 4031 4031 THR THR B . n B 1 32 ARG 32 4032 4032 ARG ARG B . n B 1 33 ILE 33 4033 4033 ILE ILE B . n B 1 34 CYS 34 4034 4034 CYS CYS B . n B 1 35 GLU 35 4035 4035 GLU GLU B . n B 1 36 ASN 36 4036 4036 ASN ASN B . n B 1 37 LEU 37 4037 4037 LEU LEU B . n B 1 38 LEU 38 4038 4038 LEU LEU B . n B 1 39 LEU 39 4039 4039 LEU LEU B . n B 1 40 SER 40 4040 4040 SER SER B . n B 1 41 LYS 41 4041 4041 LYS LYS B . n B 1 42 GLU 42 4042 4042 GLU GLU B . n B 1 43 VAL 43 4043 4043 VAL VAL B . n B 1 44 SER 44 4044 4044 SER SER B . n B 1 45 PHE 45 4045 4045 PHE PHE B . n B 1 46 LEU 46 4046 4046 LEU LEU B . n B 1 47 LYS 47 4047 4047 LYS LYS B . n B 1 48 ALA 48 4048 4048 ALA ALA B . n B 1 49 ASP 49 4049 4049 ASP ASP B . n B 1 50 GLY 50 4050 4050 GLY GLY B . n B 1 51 SER 51 4051 4051 SER SER B . n B 1 52 VAL 52 4052 4052 VAL VAL B . n B 1 53 GLU 53 4053 4053 GLU GLU B . n B 1 54 ASN 54 4054 4054 ASN ASN B . n B 1 55 PHE 55 4055 4055 PHE PHE B . n B 1 56 LYS 56 4056 4056 LYS LYS B . n B 1 57 LEU 57 4057 4057 LEU LEU B . n B 1 58 SER 58 4058 4058 SER SER B . n B 1 59 ASP 59 4059 4059 ASP ASP B . n B 1 60 MSE 60 4060 4060 MSE MSE B . n B 1 61 GLU 61 4061 4061 GLU GLU B . n B 1 62 TYR 62 4062 4062 TYR TYR B . n B 1 63 GLU 63 4063 4063 GLU GLU B . n B 1 64 ILE 64 4064 4064 ILE ILE B . n B 1 65 THR 65 4065 4065 THR THR B . n B 1 66 ASN 66 4066 4066 ASN ASN B . n B 1 67 THR 67 4067 4067 THR THR B . n B 1 68 GLU 68 4068 4068 GLU GLU B . n B 1 69 GLU 69 4069 4069 GLU GLU B . n B 1 70 LEU 70 4070 4070 LEU LEU B . n B 1 71 PRO 71 4071 4071 PRO PRO B . n B 1 72 GLU 72 4072 ? ? ? B . n B 1 73 LEU 73 4073 ? ? ? B . n B 1 74 GLU 74 4074 ? ? ? B . n B 1 75 HIS 75 4075 ? ? ? B . n B 1 76 HIS 76 4076 ? ? ? B . n B 1 77 HIS 77 4077 ? ? ? B . n B 1 78 HIS 78 4078 ? ? ? B . n B 1 79 HIS 79 4079 ? ? ? B . n B 1 80 HIS 80 4080 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 5001 5001 HOH HOH A . C 2 HOH 2 5002 5002 HOH HOH A . C 2 HOH 3 5003 5003 HOH HOH A . C 2 HOH 4 5006 5006 HOH HOH A . C 2 HOH 5 5007 5007 HOH HOH A . C 2 HOH 6 5011 5011 HOH HOH A . C 2 HOH 7 5013 5013 HOH HOH A . C 2 HOH 8 5015 5015 HOH HOH A . C 2 HOH 9 5019 5019 HOH HOH A . C 2 HOH 10 5020 5020 HOH HOH A . C 2 HOH 11 5021 5021 HOH HOH A . C 2 HOH 12 5022 5022 HOH HOH A . C 2 HOH 13 5028 5028 HOH HOH A . C 2 HOH 14 5031 5031 HOH HOH A . C 2 HOH 15 5032 5032 HOH HOH A . C 2 HOH 16 5033 5033 HOH HOH A . C 2 HOH 17 5034 5034 HOH HOH A . C 2 HOH 18 5035 5035 HOH HOH A . C 2 HOH 19 5036 5036 HOH HOH A . C 2 HOH 20 5038 5038 HOH HOH A . C 2 HOH 21 5040 5040 HOH HOH A . C 2 HOH 22 5041 5041 HOH HOH A . C 2 HOH 23 5044 5044 HOH HOH A . C 2 HOH 24 5046 5046 HOH HOH A . C 2 HOH 25 5048 5048 HOH HOH A . C 2 HOH 26 5049 5049 HOH HOH A . C 2 HOH 27 5054 5054 HOH HOH A . C 2 HOH 28 5056 5056 HOH HOH A . C 2 HOH 29 5057 5057 HOH HOH A . C 2 HOH 30 5058 5058 HOH HOH A . C 2 HOH 31 5060 5060 HOH HOH A . C 2 HOH 32 5061 5061 HOH HOH A . C 2 HOH 33 5062 5062 HOH HOH A . C 2 HOH 34 5063 5063 HOH HOH A . C 2 HOH 35 5066 5066 HOH HOH A . C 2 HOH 36 5067 5067 HOH HOH A . C 2 HOH 37 5068 5068 HOH HOH A . C 2 HOH 38 5070 5070 HOH HOH A . C 2 HOH 39 5071 5071 HOH HOH A . C 2 HOH 40 5075 5075 HOH HOH A . C 2 HOH 41 5078 5078 HOH HOH A . C 2 HOH 42 5079 5079 HOH HOH A . C 2 HOH 43 5080 5080 HOH HOH A . C 2 HOH 44 5083 5083 HOH HOH A . C 2 HOH 45 5084 5084 HOH HOH A . C 2 HOH 46 5086 5086 HOH HOH A . C 2 HOH 47 5090 5090 HOH HOH A . C 2 HOH 48 5093 5093 HOH HOH A . C 2 HOH 49 5095 5095 HOH HOH A . C 2 HOH 50 5096 5096 HOH HOH A . C 2 HOH 51 5097 5097 HOH HOH A . C 2 HOH 52 5099 5099 HOH HOH A . C 2 HOH 53 5102 5102 HOH HOH A . C 2 HOH 54 5106 5106 HOH HOH A . C 2 HOH 55 5109 5109 HOH HOH A . C 2 HOH 56 5112 5112 HOH HOH A . C 2 HOH 57 5114 5114 HOH HOH A . C 2 HOH 58 5115 5115 HOH HOH A . C 2 HOH 59 5116 5116 HOH HOH A . C 2 HOH 60 5117 5117 HOH HOH A . C 2 HOH 61 5118 5118 HOH HOH A . C 2 HOH 62 5119 5119 HOH HOH A . C 2 HOH 63 5121 5121 HOH HOH A . C 2 HOH 64 5122 5122 HOH HOH A . C 2 HOH 65 5123 5123 HOH HOH A . C 2 HOH 66 5126 5126 HOH HOH A . C 2 HOH 67 5127 5127 HOH HOH A . C 2 HOH 68 5129 5129 HOH HOH A . C 2 HOH 69 5130 5130 HOH HOH A . C 2 HOH 70 5132 5132 HOH HOH A . C 2 HOH 71 5133 5133 HOH HOH A . C 2 HOH 72 5138 5138 HOH HOH A . C 2 HOH 73 5140 5140 HOH HOH A . C 2 HOH 74 5143 5143 HOH HOH A . C 2 HOH 75 5144 5144 HOH HOH A . C 2 HOH 76 5145 5145 HOH HOH A . C 2 HOH 77 5147 5147 HOH HOH A . C 2 HOH 78 5148 5148 HOH HOH A . C 2 HOH 79 5149 5149 HOH HOH A . C 2 HOH 80 5152 5152 HOH HOH A . C 2 HOH 81 5153 5153 HOH HOH A . C 2 HOH 82 5154 5154 HOH HOH A . C 2 HOH 83 5155 5155 HOH HOH A . C 2 HOH 84 5157 5157 HOH HOH A . C 2 HOH 85 5164 5164 HOH HOH A . C 2 HOH 86 5166 5166 HOH HOH A . C 2 HOH 87 5170 5170 HOH HOH A . C 2 HOH 88 5172 5172 HOH HOH A . C 2 HOH 89 5173 5173 HOH HOH A . C 2 HOH 90 5175 5175 HOH HOH A . C 2 HOH 91 5179 5179 HOH HOH A . C 2 HOH 92 5181 5181 HOH HOH A . C 2 HOH 93 5182 5182 HOH HOH A . C 2 HOH 94 5183 5183 HOH HOH A . C 2 HOH 95 5184 5184 HOH HOH A . C 2 HOH 96 5186 5186 HOH HOH A . C 2 HOH 97 5187 5187 HOH HOH A . D 2 HOH 1 5004 5004 HOH HOH B . D 2 HOH 2 5005 5005 HOH HOH B . D 2 HOH 3 5008 5008 HOH HOH B . D 2 HOH 4 5009 5009 HOH HOH B . D 2 HOH 5 5010 5010 HOH HOH B . D 2 HOH 6 5012 5012 HOH HOH B . D 2 HOH 7 5014 5014 HOH HOH B . D 2 HOH 8 5016 5016 HOH HOH B . D 2 HOH 9 5017 5017 HOH HOH B . D 2 HOH 10 5018 5018 HOH HOH B . D 2 HOH 11 5023 5023 HOH HOH B . D 2 HOH 12 5024 5024 HOH HOH B . D 2 HOH 13 5025 5025 HOH HOH B . D 2 HOH 14 5026 5026 HOH HOH B . D 2 HOH 15 5027 5027 HOH HOH B . D 2 HOH 16 5029 5029 HOH HOH B . D 2 HOH 17 5030 5030 HOH HOH B . D 2 HOH 18 5037 5037 HOH HOH B . D 2 HOH 19 5039 5039 HOH HOH B . D 2 HOH 20 5042 5042 HOH HOH B . D 2 HOH 21 5043 5043 HOH HOH B . D 2 HOH 22 5045 5045 HOH HOH B . D 2 HOH 23 5050 5050 HOH HOH B . D 2 HOH 24 5051 5051 HOH HOH B . D 2 HOH 25 5052 5052 HOH HOH B . D 2 HOH 26 5053 5053 HOH HOH B . D 2 HOH 27 5055 5055 HOH HOH B . D 2 HOH 28 5059 5059 HOH HOH B . D 2 HOH 29 5064 5064 HOH HOH B . D 2 HOH 30 5065 5065 HOH HOH B . D 2 HOH 31 5069 5069 HOH HOH B . D 2 HOH 32 5072 5072 HOH HOH B . D 2 HOH 33 5073 5073 HOH HOH B . D 2 HOH 34 5074 5074 HOH HOH B . D 2 HOH 35 5076 5076 HOH HOH B . D 2 HOH 36 5077 5077 HOH HOH B . D 2 HOH 37 5081 5081 HOH HOH B . D 2 HOH 38 5082 5082 HOH HOH B . D 2 HOH 39 5085 5085 HOH HOH B . D 2 HOH 40 5087 5087 HOH HOH B . D 2 HOH 41 5088 5088 HOH HOH B . D 2 HOH 42 5089 5089 HOH HOH B . D 2 HOH 43 5091 5091 HOH HOH B . D 2 HOH 44 5092 5092 HOH HOH B . D 2 HOH 45 5094 5094 HOH HOH B . D 2 HOH 46 5098 5098 HOH HOH B . D 2 HOH 47 5100 5100 HOH HOH B . D 2 HOH 48 5101 5101 HOH HOH B . D 2 HOH 49 5103 5103 HOH HOH B . D 2 HOH 50 5104 5104 HOH HOH B . D 2 HOH 51 5105 5105 HOH HOH B . D 2 HOH 52 5107 5107 HOH HOH B . D 2 HOH 53 5108 5108 HOH HOH B . D 2 HOH 54 5110 5110 HOH HOH B . D 2 HOH 55 5111 5111 HOH HOH B . D 2 HOH 56 5113 5113 HOH HOH B . D 2 HOH 57 5120 5120 HOH HOH B . D 2 HOH 58 5124 5124 HOH HOH B . D 2 HOH 59 5125 5125 HOH HOH B . D 2 HOH 60 5128 5128 HOH HOH B . D 2 HOH 61 5131 5131 HOH HOH B . D 2 HOH 62 5134 5134 HOH HOH B . D 2 HOH 63 5135 5135 HOH HOH B . D 2 HOH 64 5136 5136 HOH HOH B . D 2 HOH 65 5137 5137 HOH HOH B . D 2 HOH 66 5139 5139 HOH HOH B . D 2 HOH 67 5141 5141 HOH HOH B . D 2 HOH 68 5150 5150 HOH HOH B . D 2 HOH 69 5151 5151 HOH HOH B . D 2 HOH 70 5156 5156 HOH HOH B . D 2 HOH 71 5158 5158 HOH HOH B . D 2 HOH 72 5160 5160 HOH HOH B . D 2 HOH 73 5161 5161 HOH HOH B . D 2 HOH 74 5162 5162 HOH HOH B . D 2 HOH 75 5165 5165 HOH HOH B . D 2 HOH 76 5167 5167 HOH HOH B . D 2 HOH 77 5168 5168 HOH HOH B . D 2 HOH 78 5169 5169 HOH HOH B . D 2 HOH 79 5171 5171 HOH HOH B . D 2 HOH 80 5174 5174 HOH HOH B . D 2 HOH 81 5177 5177 HOH HOH B . D 2 HOH 82 5178 5178 HOH HOH B . D 2 HOH 83 5185 5185 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 B SER 4058 ? CB A B SER 58 CB 2 1 Y 0 B SER 4058 ? OG A B SER 58 OG # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELX 'model building' . ? 1 SHELXL-97 refinement . ? 2 ADSC 'data collection' . ? 3 SCALEPACK 'data scaling' . ? 4 SHELX phasing . ? 5 # _cell.entry_id 2DLB _cell.length_a 32.347 _cell.length_b 76.116 _cell.length_c 78.385 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2DLB _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2DLB _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.71 _exptl_crystal.density_percent_sol 52.83 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.0 _exptl_crystal_grow.pdbx_details '0.1M lithium sulfate, 0.1M sodium citrate, 20% PEG 4000, VAPOR DIFFUSION, HANGING DROP, temperature 277K, pH 4.0' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2006-03-09 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9787 1.0 2 0.9794 1.0 3 0.9678 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9787, 0.9794, 0.9678' # _reflns.entry_id 2DLB _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.2 _reflns.number_obs 53730 _reflns.number_all 53757 _reflns.percent_possible_obs 87.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.20 _reflns_shell.d_res_low 1.24 _reflns_shell.percent_possible_all 59.6 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2DLB _refine.ls_number_reflns_obs 53730 _refine.ls_number_reflns_all 51040 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 1.20 _refine.ls_percent_reflns_obs 83.1 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all 0.1543 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.173 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters 11721 _refine.ls_number_restraints 14189 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details 'Anisotropic refinement reduced free r (no cutoff) by' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'AB INITIO' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2DLB _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 6 _refine_analyze.occupancy_sum_hydrogen 1100.50 _refine_analyze.occupancy_sum_non_hydrogen 1281.00 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1114 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 180 _refine_hist.number_atoms_total 1294 _refine_hist.d_res_high 1.20 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.031 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0305 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.068 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.073 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.032 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.005 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.064 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.093 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 2DLB _pdbx_refine.R_factor_all_no_cutoff 0.1543 _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff 0.1367 _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff 40228 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _database_PDB_matrix.entry_id 2DLB _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _struct.entry_id 2DLB _struct.title 'X-ray Crystal Structure of Protein yopT from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR412' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DLB _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text 'sr412, NESG, Structural Genomics, PSI, Protein Structure Initiative, Northeast Structural Genomics Consortium, UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O34498_BACSU _struct_ref.pdbx_db_accession O34498 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MAGYLNNIALNLEIVLKNKADSPEVSETLVTRICENLLLSKEVSFLKADGSVENFKLSDMEYEITNTEELPE _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2DLB A 1 ? 72 ? O34498 1 ? 72 ? 2001 2072 2 1 2DLB B 1 ? 72 ? O34498 1 ? 72 ? 4001 4072 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2DLB MSE A 1 ? UNP O34498 MET 1 'modified residue' 2001 1 1 2DLB MSE A 60 ? UNP O34498 MET 60 'modified residue' 2060 2 1 2DLB LEU A 73 ? UNP O34498 ? ? 'expression tag' 2073 3 1 2DLB GLU A 74 ? UNP O34498 ? ? 'expression tag' 2074 4 1 2DLB HIS A 75 ? UNP O34498 ? ? 'expression tag' 2075 5 1 2DLB HIS A 76 ? UNP O34498 ? ? 'expression tag' 2076 6 1 2DLB HIS A 77 ? UNP O34498 ? ? 'expression tag' 2077 7 1 2DLB HIS A 78 ? UNP O34498 ? ? 'expression tag' 2078 8 1 2DLB HIS A 79 ? UNP O34498 ? ? 'expression tag' 2079 9 1 2DLB HIS A 80 ? UNP O34498 ? ? 'expression tag' 2080 10 2 2DLB MSE B 1 ? UNP O34498 MET 1 'modified residue' 4001 11 2 2DLB MSE B 60 ? UNP O34498 MET 60 'modified residue' 4060 12 2 2DLB LEU B 73 ? UNP O34498 ? ? 'expression tag' 4073 13 2 2DLB GLU B 74 ? UNP O34498 ? ? 'expression tag' 4074 14 2 2DLB HIS B 75 ? UNP O34498 ? ? 'expression tag' 4075 15 2 2DLB HIS B 76 ? UNP O34498 ? ? 'expression tag' 4076 16 2 2DLB HIS B 77 ? UNP O34498 ? ? 'expression tag' 4077 17 2 2DLB HIS B 78 ? UNP O34498 ? ? 'expression tag' 4078 18 2 2DLB HIS B 79 ? UNP O34498 ? ? 'expression tag' 4079 19 2 2DLB HIS B 80 ? UNP O34498 ? ? 'expression tag' 4080 20 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5570 ? 1 MORE -31 ? 1 'SSA (A^2)' 8110 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details 'In according to Dynamic Light Scattering SR412 is dimer.' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 22 ? ASN A 36 ? SER A 2022 ASN A 2036 1 ? 15 HELX_P HELX_P2 2 SER B 22 ? ASN B 36 ? SER B 4022 ASN B 4036 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASP 59 C ? ? ? 1_555 A MSE 60 N ? ? A ASP 2059 A MSE 2060 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale2 covale both ? A MSE 60 C ? ? ? 1_555 A GLU 61 N ? ? A MSE 2060 A GLU 2061 1_555 ? ? ? ? ? ? ? 1.313 ? ? covale3 covale both ? B ASP 59 C ? ? ? 1_555 B MSE 60 N ? ? B ASP 4059 B MSE 4060 1_555 ? ? ? ? ? ? ? 1.311 ? ? covale4 covale both ? B MSE 60 C ? ? ? 1_555 B GLU 61 N ? ? B MSE 4060 B GLU 4061 1_555 ? ? ? ? ? ? ? 1.310 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE A 60 ? . . . . MSE A 2060 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE B 60 ? . . . . MSE B 4060 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 3 ? LYS A 19 ? GLY A 2003 LYS A 2019 A 2 GLY B 3 ? LYS B 19 ? GLY B 4003 LYS B 4019 A 3 VAL A 52 ? GLU A 69 ? VAL A 2052 GLU A 2069 A 4 GLU A 42 ? LEU A 46 ? GLU A 2042 LEU A 2046 A 5 GLU B 42 ? LEU B 46 ? GLU B 4042 LEU B 4046 A 6 VAL B 52 ? GLU B 69 ? VAL B 4052 GLU B 4069 A 7 GLY A 3 ? LYS A 19 ? GLY A 2003 LYS A 2019 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 10 ? N LEU A 2010 O LEU B 12 ? O LEU B 4012 A 2 3 O GLU B 13 ? O GLU B 4013 N SER A 58 ? N SER A 2058 A 3 4 O PHE A 55 ? O PHE A 2055 N VAL A 43 ? N VAL A 2043 A 4 5 N SER A 44 ? N SER A 2044 O SER B 44 ? O SER B 4044 A 5 6 N VAL B 43 ? N VAL B 4043 O PHE B 55 ? O PHE B 4055 A 6 7 O SER B 58 ? O SER B 4058 N GLU A 13 ? N GLU A 2013 # _pdbx_entry_details.entry_id 2DLB _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CB _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 SER _pdbx_validate_rmsd_bond.auth_seq_id_1 2044 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OG _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 SER _pdbx_validate_rmsd_bond.auth_seq_id_2 2044 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.335 _pdbx_validate_rmsd_bond.bond_target_value 1.418 _pdbx_validate_rmsd_bond.bond_deviation -0.083 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.013 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CD B ARG 4032 ? ? NE B ARG 4032 ? ? CZ B ARG 4032 ? ? 135.35 123.60 11.75 1.40 N 2 1 NH1 B ARG 4032 ? ? CZ B ARG 4032 ? ? NH2 B ARG 4032 ? ? 126.79 119.40 7.39 1.10 N 3 1 NE B ARG 4032 ? ? CZ B ARG 4032 ? ? NH1 B ARG 4032 ? ? 115.40 120.30 -4.90 0.50 N # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 60 A MSE 2060 ? MET SELENOMETHIONINE 2 B MSE 60 B MSE 4060 ? MET SELENOMETHIONINE # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 2001 ? A MSE 1 2 1 Y 1 A GLU 2072 ? A GLU 72 3 1 Y 1 A LEU 2073 ? A LEU 73 4 1 Y 1 A GLU 2074 ? A GLU 74 5 1 Y 1 A HIS 2075 ? A HIS 75 6 1 Y 1 A HIS 2076 ? A HIS 76 7 1 Y 1 A HIS 2077 ? A HIS 77 8 1 Y 1 A HIS 2078 ? A HIS 78 9 1 Y 1 A HIS 2079 ? A HIS 79 10 1 Y 1 A HIS 2080 ? A HIS 80 11 1 Y 1 B MSE 4001 ? B MSE 1 12 1 Y 1 B GLU 4072 ? B GLU 72 13 1 Y 1 B LEU 4073 ? B LEU 73 14 1 Y 1 B GLU 4074 ? B GLU 74 15 1 Y 1 B HIS 4075 ? B HIS 75 16 1 Y 1 B HIS 4076 ? B HIS 76 17 1 Y 1 B HIS 4077 ? B HIS 77 18 1 Y 1 B HIS 4078 ? B HIS 78 19 1 Y 1 B HIS 4079 ? B HIS 79 20 1 Y 1 B HIS 4080 ? B HIS 80 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLU N N N N 88 GLU CA C N S 89 GLU C C N N 90 GLU O O N N 91 GLU CB C N N 92 GLU CG C N N 93 GLU CD C N N 94 GLU OE1 O N N 95 GLU OE2 O N N 96 GLU OXT O N N 97 GLU H H N N 98 GLU H2 H N N 99 GLU HA H N N 100 GLU HB2 H N N 101 GLU HB3 H N N 102 GLU HG2 H N N 103 GLU HG3 H N N 104 GLU HE2 H N N 105 GLU HXT H N N 106 GLY N N N N 107 GLY CA C N N 108 GLY C C N N 109 GLY O O N N 110 GLY OXT O N N 111 GLY H H N N 112 GLY H2 H N N 113 GLY HA2 H N N 114 GLY HA3 H N N 115 GLY HXT H N N 116 HIS N N N N 117 HIS CA C N S 118 HIS C C N N 119 HIS O O N N 120 HIS CB C N N 121 HIS CG C Y N 122 HIS ND1 N Y N 123 HIS CD2 C Y N 124 HIS CE1 C Y N 125 HIS NE2 N Y N 126 HIS OXT O N N 127 HIS H H N N 128 HIS H2 H N N 129 HIS HA H N N 130 HIS HB2 H N N 131 HIS HB3 H N N 132 HIS HD1 H N N 133 HIS HD2 H N N 134 HIS HE1 H N N 135 HIS HE2 H N N 136 HIS HXT H N N 137 HOH O O N N 138 HOH H1 H N N 139 HOH H2 H N N 140 ILE N N N N 141 ILE CA C N S 142 ILE C C N N 143 ILE O O N N 144 ILE CB C N S 145 ILE CG1 C N N 146 ILE CG2 C N N 147 ILE CD1 C N N 148 ILE OXT O N N 149 ILE H H N N 150 ILE H2 H N N 151 ILE HA H N N 152 ILE HB H N N 153 ILE HG12 H N N 154 ILE HG13 H N N 155 ILE HG21 H N N 156 ILE HG22 H N N 157 ILE HG23 H N N 158 ILE HD11 H N N 159 ILE HD12 H N N 160 ILE HD13 H N N 161 ILE HXT H N N 162 LEU N N N N 163 LEU CA C N S 164 LEU C C N N 165 LEU O O N N 166 LEU CB C N N 167 LEU CG C N N 168 LEU CD1 C N N 169 LEU CD2 C N N 170 LEU OXT O N N 171 LEU H H N N 172 LEU H2 H N N 173 LEU HA H N N 174 LEU HB2 H N N 175 LEU HB3 H N N 176 LEU HG H N N 177 LEU HD11 H N N 178 LEU HD12 H N N 179 LEU HD13 H N N 180 LEU HD21 H N N 181 LEU HD22 H N N 182 LEU HD23 H N N 183 LEU HXT H N N 184 LYS N N N N 185 LYS CA C N S 186 LYS C C N N 187 LYS O O N N 188 LYS CB C N N 189 LYS CG C N N 190 LYS CD C N N 191 LYS CE C N N 192 LYS NZ N N N 193 LYS OXT O N N 194 LYS H H N N 195 LYS H2 H N N 196 LYS HA H N N 197 LYS HB2 H N N 198 LYS HB3 H N N 199 LYS HG2 H N N 200 LYS HG3 H N N 201 LYS HD2 H N N 202 LYS HD3 H N N 203 LYS HE2 H N N 204 LYS HE3 H N N 205 LYS HZ1 H N N 206 LYS HZ2 H N N 207 LYS HZ3 H N N 208 LYS HXT H N N 209 MET N N N N 210 MET CA C N S 211 MET C C N N 212 MET O O N N 213 MET CB C N N 214 MET CG C N N 215 MET SD S N N 216 MET CE C N N 217 MET OXT O N N 218 MET H H N N 219 MET H2 H N N 220 MET HA H N N 221 MET HB2 H N N 222 MET HB3 H N N 223 MET HG2 H N N 224 MET HG3 H N N 225 MET HE1 H N N 226 MET HE2 H N N 227 MET HE3 H N N 228 MET HXT H N N 229 MSE N N N N 230 MSE CA C N S 231 MSE C C N N 232 MSE O O N N 233 MSE OXT O N N 234 MSE CB C N N 235 MSE CG C N N 236 MSE SE SE N N 237 MSE CE C N N 238 MSE H H N N 239 MSE H2 H N N 240 MSE HA H N N 241 MSE HXT H N N 242 MSE HB2 H N N 243 MSE HB3 H N N 244 MSE HG2 H N N 245 MSE HG3 H N N 246 MSE HE1 H N N 247 MSE HE2 H N N 248 MSE HE3 H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TYR N N N N 321 TYR CA C N S 322 TYR C C N N 323 TYR O O N N 324 TYR CB C N N 325 TYR CG C Y N 326 TYR CD1 C Y N 327 TYR CD2 C Y N 328 TYR CE1 C Y N 329 TYR CE2 C Y N 330 TYR CZ C Y N 331 TYR OH O N N 332 TYR OXT O N N 333 TYR H H N N 334 TYR H2 H N N 335 TYR HA H N N 336 TYR HB2 H N N 337 TYR HB3 H N N 338 TYR HD1 H N N 339 TYR HD2 H N N 340 TYR HE1 H N N 341 TYR HE2 H N N 342 TYR HH H N N 343 TYR HXT H N N 344 VAL N N N N 345 VAL CA C N S 346 VAL C C N N 347 VAL O O N N 348 VAL CB C N N 349 VAL CG1 C N N 350 VAL CG2 C N N 351 VAL OXT O N N 352 VAL H H N N 353 VAL H2 H N N 354 VAL HA H N N 355 VAL HB H N N 356 VAL HG11 H N N 357 VAL HG12 H N N 358 VAL HG13 H N N 359 VAL HG21 H N N 360 VAL HG22 H N N 361 VAL HG23 H N N 362 VAL HXT H N N 363 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLU N CA sing N N 83 GLU N H sing N N 84 GLU N H2 sing N N 85 GLU CA C sing N N 86 GLU CA CB sing N N 87 GLU CA HA sing N N 88 GLU C O doub N N 89 GLU C OXT sing N N 90 GLU CB CG sing N N 91 GLU CB HB2 sing N N 92 GLU CB HB3 sing N N 93 GLU CG CD sing N N 94 GLU CG HG2 sing N N 95 GLU CG HG3 sing N N 96 GLU CD OE1 doub N N 97 GLU CD OE2 sing N N 98 GLU OE2 HE2 sing N N 99 GLU OXT HXT sing N N 100 GLY N CA sing N N 101 GLY N H sing N N 102 GLY N H2 sing N N 103 GLY CA C sing N N 104 GLY CA HA2 sing N N 105 GLY CA HA3 sing N N 106 GLY C O doub N N 107 GLY C OXT sing N N 108 GLY OXT HXT sing N N 109 HIS N CA sing N N 110 HIS N H sing N N 111 HIS N H2 sing N N 112 HIS CA C sing N N 113 HIS CA CB sing N N 114 HIS CA HA sing N N 115 HIS C O doub N N 116 HIS C OXT sing N N 117 HIS CB CG sing N N 118 HIS CB HB2 sing N N 119 HIS CB HB3 sing N N 120 HIS CG ND1 sing Y N 121 HIS CG CD2 doub Y N 122 HIS ND1 CE1 doub Y N 123 HIS ND1 HD1 sing N N 124 HIS CD2 NE2 sing Y N 125 HIS CD2 HD2 sing N N 126 HIS CE1 NE2 sing Y N 127 HIS CE1 HE1 sing N N 128 HIS NE2 HE2 sing N N 129 HIS OXT HXT sing N N 130 HOH O H1 sing N N 131 HOH O H2 sing N N 132 ILE N CA sing N N 133 ILE N H sing N N 134 ILE N H2 sing N N 135 ILE CA C sing N N 136 ILE CA CB sing N N 137 ILE CA HA sing N N 138 ILE C O doub N N 139 ILE C OXT sing N N 140 ILE CB CG1 sing N N 141 ILE CB CG2 sing N N 142 ILE CB HB sing N N 143 ILE CG1 CD1 sing N N 144 ILE CG1 HG12 sing N N 145 ILE CG1 HG13 sing N N 146 ILE CG2 HG21 sing N N 147 ILE CG2 HG22 sing N N 148 ILE CG2 HG23 sing N N 149 ILE CD1 HD11 sing N N 150 ILE CD1 HD12 sing N N 151 ILE CD1 HD13 sing N N 152 ILE OXT HXT sing N N 153 LEU N CA sing N N 154 LEU N H sing N N 155 LEU N H2 sing N N 156 LEU CA C sing N N 157 LEU CA CB sing N N 158 LEU CA HA sing N N 159 LEU C O doub N N 160 LEU C OXT sing N N 161 LEU CB CG sing N N 162 LEU CB HB2 sing N N 163 LEU CB HB3 sing N N 164 LEU CG CD1 sing N N 165 LEU CG CD2 sing N N 166 LEU CG HG sing N N 167 LEU CD1 HD11 sing N N 168 LEU CD1 HD12 sing N N 169 LEU CD1 HD13 sing N N 170 LEU CD2 HD21 sing N N 171 LEU CD2 HD22 sing N N 172 LEU CD2 HD23 sing N N 173 LEU OXT HXT sing N N 174 LYS N CA sing N N 175 LYS N H sing N N 176 LYS N H2 sing N N 177 LYS CA C sing N N 178 LYS CA CB sing N N 179 LYS CA HA sing N N 180 LYS C O doub N N 181 LYS C OXT sing N N 182 LYS CB CG sing N N 183 LYS CB HB2 sing N N 184 LYS CB HB3 sing N N 185 LYS CG CD sing N N 186 LYS CG HG2 sing N N 187 LYS CG HG3 sing N N 188 LYS CD CE sing N N 189 LYS CD HD2 sing N N 190 LYS CD HD3 sing N N 191 LYS CE NZ sing N N 192 LYS CE HE2 sing N N 193 LYS CE HE3 sing N N 194 LYS NZ HZ1 sing N N 195 LYS NZ HZ2 sing N N 196 LYS NZ HZ3 sing N N 197 LYS OXT HXT sing N N 198 MET N CA sing N N 199 MET N H sing N N 200 MET N H2 sing N N 201 MET CA C sing N N 202 MET CA CB sing N N 203 MET CA HA sing N N 204 MET C O doub N N 205 MET C OXT sing N N 206 MET CB CG sing N N 207 MET CB HB2 sing N N 208 MET CB HB3 sing N N 209 MET CG SD sing N N 210 MET CG HG2 sing N N 211 MET CG HG3 sing N N 212 MET SD CE sing N N 213 MET CE HE1 sing N N 214 MET CE HE2 sing N N 215 MET CE HE3 sing N N 216 MET OXT HXT sing N N 217 MSE N CA sing N N 218 MSE N H sing N N 219 MSE N H2 sing N N 220 MSE CA C sing N N 221 MSE CA CB sing N N 222 MSE CA HA sing N N 223 MSE C O doub N N 224 MSE C OXT sing N N 225 MSE OXT HXT sing N N 226 MSE CB CG sing N N 227 MSE CB HB2 sing N N 228 MSE CB HB3 sing N N 229 MSE CG SE sing N N 230 MSE CG HG2 sing N N 231 MSE CG HG3 sing N N 232 MSE SE CE sing N N 233 MSE CE HE1 sing N N 234 MSE CE HE2 sing N N 235 MSE CE HE3 sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TYR N CA sing N N 306 TYR N H sing N N 307 TYR N H2 sing N N 308 TYR CA C sing N N 309 TYR CA CB sing N N 310 TYR CA HA sing N N 311 TYR C O doub N N 312 TYR C OXT sing N N 313 TYR CB CG sing N N 314 TYR CB HB2 sing N N 315 TYR CB HB3 sing N N 316 TYR CG CD1 doub Y N 317 TYR CG CD2 sing Y N 318 TYR CD1 CE1 sing Y N 319 TYR CD1 HD1 sing N N 320 TYR CD2 CE2 doub Y N 321 TYR CD2 HD2 sing N N 322 TYR CE1 CZ doub Y N 323 TYR CE1 HE1 sing N N 324 TYR CE2 CZ sing Y N 325 TYR CE2 HE2 sing N N 326 TYR CZ OH sing N N 327 TYR OH HH sing N N 328 TYR OXT HXT sing N N 329 VAL N CA sing N N 330 VAL N H sing N N 331 VAL N H2 sing N N 332 VAL CA C sing N N 333 VAL CA CB sing N N 334 VAL CA HA sing N N 335 VAL C O doub N N 336 VAL C OXT sing N N 337 VAL CB CG1 sing N N 338 VAL CB CG2 sing N N 339 VAL CB HB sing N N 340 VAL CG1 HG11 sing N N 341 VAL CG1 HG12 sing N N 342 VAL CG1 HG13 sing N N 343 VAL CG2 HG21 sing N N 344 VAL CG2 HG22 sing N N 345 VAL CG2 HG23 sing N N 346 VAL OXT HXT sing N N 347 # _atom_sites.entry_id 2DLB _atom_sites.fract_transf_matrix[1][1] 0.030915 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013138 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012758 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_