data_2DLE # _entry.id 2DLE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DLE pdb_00002dle 10.2210/pdb2dle/pdb RCSB RCSB025552 ? ? WWPDB D_1000025552 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hso002002643.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DLE _pdbx_database_status.recvd_initial_deposition_date 2006-04-18 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Izumi, K.' 1 'Yoshida, M.' 2 'Hayashi, F.' 3 'Yokoyama, S.' 4 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 5 # _citation.id primary _citation.title 'Solution structure of the fourth fn3 domain of human receptor-type tyrosine-protein phosphatase eta' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Izumi, K.' 1 ? primary 'Yoshida, M.' 2 ? primary 'Hayashi, F.' 3 ? primary 'Yokoyama, S.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Receptor-type tyrosine-protein phosphatase eta' _entity.formula_weight 10746.783 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 3.1.3.48 _entity.pdbx_mutation ? _entity.pdbx_fragment fn3 _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Protein-tyrosine phosphatase eta, R-PTP-eta, HPTP eta, Protein-tyrosine phosphatase receptor type J, Density-enhanced phosphatase 1, DEP-1, CD148 antigen ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGAIQVFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETDSSNLNVSEPRAVIPGLRSSTFYNITVCPVL GDIEGTPGFLQVHTPPVPSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGAIQVFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETDSSNLNVSEPRAVIPGLRSSTFYNITVCPVL GDIEGTPGFLQVHTPPVPSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hso002002643.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ALA n 1 9 ILE n 1 10 GLN n 1 11 VAL n 1 12 PHE n 1 13 ASP n 1 14 VAL n 1 15 THR n 1 16 ALA n 1 17 VAL n 1 18 ASN n 1 19 ILE n 1 20 SER n 1 21 ALA n 1 22 THR n 1 23 SER n 1 24 LEU n 1 25 THR n 1 26 LEU n 1 27 ILE n 1 28 TRP n 1 29 LYS n 1 30 VAL n 1 31 SER n 1 32 ASP n 1 33 ASN n 1 34 GLU n 1 35 SER n 1 36 SER n 1 37 SER n 1 38 ASN n 1 39 TYR n 1 40 THR n 1 41 TYR n 1 42 LYS n 1 43 ILE n 1 44 HIS n 1 45 VAL n 1 46 ALA n 1 47 GLY n 1 48 GLU n 1 49 THR n 1 50 ASP n 1 51 SER n 1 52 SER n 1 53 ASN n 1 54 LEU n 1 55 ASN n 1 56 VAL n 1 57 SER n 1 58 GLU n 1 59 PRO n 1 60 ARG n 1 61 ALA n 1 62 VAL n 1 63 ILE n 1 64 PRO n 1 65 GLY n 1 66 LEU n 1 67 ARG n 1 68 SER n 1 69 SER n 1 70 THR n 1 71 PHE n 1 72 TYR n 1 73 ASN n 1 74 ILE n 1 75 THR n 1 76 VAL n 1 77 CYS n 1 78 PRO n 1 79 VAL n 1 80 LEU n 1 81 GLY n 1 82 ASP n 1 83 ILE n 1 84 GLU n 1 85 GLY n 1 86 THR n 1 87 PRO n 1 88 GLY n 1 89 PHE n 1 90 LEU n 1 91 GLN n 1 92 VAL n 1 93 HIS n 1 94 THR n 1 95 PRO n 1 96 PRO n 1 97 VAL n 1 98 PRO n 1 99 SER n 1 100 GLY n 1 101 PRO n 1 102 SER n 1 103 SER n 1 104 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'PTPRJ, DEP1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Cell free synthesis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050302-39 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'cell free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PTPRJ_HUMAN _struct_ref.pdbx_db_accession Q12913 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 366 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2DLE _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 98 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q12913 _struct_ref_seq.db_align_beg 366 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 456 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 98 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2DLE GLY A 1 ? UNP Q12913 ? ? 'cloning artifact' 1 1 1 2DLE SER A 2 ? UNP Q12913 ? ? 'cloning artifact' 2 2 1 2DLE SER A 3 ? UNP Q12913 ? ? 'cloning artifact' 3 3 1 2DLE GLY A 4 ? UNP Q12913 ? ? 'cloning artifact' 4 4 1 2DLE SER A 5 ? UNP Q12913 ? ? 'cloning artifact' 5 5 1 2DLE SER A 6 ? UNP Q12913 ? ? 'cloning artifact' 6 6 1 2DLE GLY A 7 ? UNP Q12913 ? ? 'cloning artifact' 7 7 1 2DLE SER A 99 ? UNP Q12913 ? ? 'cloning artifact' 99 8 1 2DLE GLY A 100 ? UNP Q12913 ? ? 'cloning artifact' 100 9 1 2DLE PRO A 101 ? UNP Q12913 ? ? 'cloning artifact' 101 10 1 2DLE SER A 102 ? UNP Q12913 ? ? 'cloning artifact' 102 11 1 2DLE SER A 103 ? UNP Q12913 ? ? 'cloning artifact' 103 12 1 2DLE GLY A 104 ? UNP Q12913 ? ? 'cloning artifact' 104 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.05mM 13C, 15N-labeled protein; 20mM d-Tris-HCl; 100mM NaCl; 1mM DTT; 0.02% NaN3; 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2DLE _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2DLE _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function,structures with the lowest energy,structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2DLE _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection VNMR 6.1C Varian 1 processing NMRPipe 20031121 Delaglio,F. 2 'data analysis' NMRView 5.0.4 Johnson,B.A 3 'data analysis' KUJIRA 0.932 Kobayashi,N. 4 'structure solution' CYANA 2.0.17 Guntert,P. 5 refinement CYANA 2.0.17 Guntert,P. 6 # _exptl.entry_id 2DLE _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2DLE _struct.title 'Solution structure of the fourth fn3 domain of human receptor-type tyrosine-protein phosphatase eta' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DLE _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;Protein-tyrosine phosphatase eta, R-PTP-eta, HPTP eta, Protein-tyrosine phosphatase receptor type J, Density-enhanced phosphatase 1, CD148 antigen, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, HYDROLASE ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 11 ? ILE A 19 ? VAL A 11 ILE A 19 A 2 LEU A 24 ? VAL A 30 ? LEU A 24 VAL A 30 A 3 ARG A 60 ? VAL A 62 ? ARG A 60 VAL A 62 B 1 SER A 51 ? VAL A 56 ? SER A 51 VAL A 56 B 2 THR A 40 ? ALA A 46 ? THR A 40 ALA A 46 B 3 PHE A 71 ? VAL A 79 ? PHE A 71 VAL A 79 B 4 GLY A 88 ? HIS A 93 ? GLY A 88 HIS A 93 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 12 ? N PHE A 12 O LYS A 29 ? O LYS A 29 A 2 3 N LEU A 26 ? N LEU A 26 O ALA A 61 ? O ALA A 61 B 1 2 O LEU A 54 ? O LEU A 54 N ILE A 43 ? N ILE A 43 B 2 3 N THR A 40 ? N THR A 40 O VAL A 79 ? O VAL A 79 B 3 4 N VAL A 76 ? N VAL A 76 O GLY A 88 ? O GLY A 88 # _database_PDB_matrix.entry_id 2DLE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2DLE _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 PHE 12 12 12 PHE PHE A . n A 1 13 ASP 13 13 13 ASP ASP A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 TRP 28 28 28 TRP TRP A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 ASN 33 33 33 ASN ASN A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 TYR 41 41 41 TYR TYR A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 HIS 44 44 44 HIS HIS A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 PRO 59 59 59 PRO PRO A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 PRO 64 64 64 PRO PRO A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 TYR 72 72 72 TYR TYR A . n A 1 73 ASN 73 73 73 ASN ASN A . n A 1 74 ILE 74 74 74 ILE ILE A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 CYS 77 77 77 CYS CYS A . n A 1 78 PRO 78 78 78 PRO PRO A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 THR 86 86 86 THR THR A . n A 1 87 PRO 87 87 87 PRO PRO A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 PHE 89 89 89 PHE PHE A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 GLN 91 91 91 GLN GLN A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 HIS 93 93 93 HIS HIS A . n A 1 94 THR 94 94 94 THR THR A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 PRO 96 96 96 PRO PRO A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 PRO 98 98 98 PRO PRO A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 PRO 101 101 101 PRO PRO A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 SER 103 103 103 SER SER A . n A 1 104 GLY 104 104 104 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-10-18 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 13 ? ? 71.40 33.15 2 1 SER A 31 ? ? -84.42 42.29 3 1 ASP A 32 ? ? -167.28 108.27 4 1 SER A 36 ? ? -75.72 48.74 5 1 PRO A 59 ? ? -69.76 4.02 6 1 ALA A 61 ? ? -162.77 114.58 7 1 PRO A 98 ? ? -69.71 2.17 8 2 SER A 31 ? ? -87.13 31.57 9 2 SER A 36 ? ? -81.88 45.15 10 2 SER A 37 ? ? -99.56 -66.25 11 2 ASN A 38 ? ? -84.95 38.09 12 2 PRO A 59 ? ? -69.71 3.83 13 2 PRO A 101 ? ? -69.79 -177.55 14 3 SER A 23 ? ? -173.44 144.91 15 3 SER A 31 ? ? -97.07 44.83 16 3 ASP A 32 ? ? -172.29 119.59 17 3 ASN A 38 ? ? -81.77 40.63 18 3 PRO A 59 ? ? -69.81 3.67 19 3 SER A 102 ? ? -43.00 105.44 20 3 SER A 103 ? ? -35.89 108.27 21 4 SER A 5 ? ? -120.38 -53.00 22 4 SER A 31 ? ? -50.99 91.07 23 4 ASP A 32 ? ? -34.15 140.91 24 4 SER A 36 ? ? -45.10 98.19 25 4 SER A 37 ? ? -132.34 -71.22 26 4 GLU A 48 ? ? -74.28 -73.35 27 4 PRO A 59 ? ? -69.72 4.05 28 4 PRO A 64 ? ? -69.77 -179.50 29 4 VAL A 97 ? ? -33.76 133.59 30 4 PRO A 98 ? ? -69.73 5.63 31 4 PRO A 101 ? ? -69.74 -173.53 32 5 SER A 3 ? ? -44.84 155.33 33 5 ILE A 9 ? ? -37.82 125.58 34 5 SER A 23 ? ? -174.63 141.08 35 5 ASP A 32 ? ? -36.94 94.47 36 5 GLU A 34 ? ? -37.36 -28.55 37 5 PRO A 59 ? ? -69.76 3.88 38 5 PRO A 64 ? ? -69.80 -179.12 39 5 VAL A 97 ? ? -34.19 135.71 40 5 PRO A 98 ? ? -69.78 3.31 41 5 SER A 102 ? ? -55.36 94.26 42 6 SER A 31 ? ? -81.98 42.76 43 6 ASP A 32 ? ? -174.44 113.06 44 6 SER A 36 ? ? -97.69 39.10 45 6 SER A 37 ? ? -77.87 -70.02 46 6 PRO A 59 ? ? -69.71 3.78 47 6 LEU A 80 ? ? -92.70 48.51 48 6 PRO A 98 ? ? -69.72 92.86 49 6 SER A 102 ? ? -56.92 100.85 50 7 SER A 5 ? ? -85.29 39.95 51 7 SER A 23 ? ? -175.16 139.32 52 7 SER A 31 ? ? -57.67 88.94 53 7 ASP A 32 ? ? 34.22 51.04 54 7 ASN A 33 ? ? -47.14 96.78 55 7 SER A 35 ? ? -97.91 43.17 56 7 SER A 36 ? ? -79.25 48.83 57 7 GLU A 48 ? ? -124.71 -53.30 58 7 PRO A 59 ? ? -69.76 3.88 59 7 ALA A 61 ? ? -165.01 118.77 60 7 VAL A 97 ? ? -36.87 138.93 61 7 SER A 102 ? ? -38.40 115.58 62 8 SER A 5 ? ? -171.92 121.24 63 8 SER A 23 ? ? -175.11 149.94 64 8 SER A 31 ? ? -49.30 88.21 65 8 ASP A 32 ? ? 34.32 49.45 66 8 ASN A 33 ? ? -48.65 93.09 67 8 SER A 35 ? ? -90.18 43.18 68 8 SER A 36 ? ? -77.10 47.47 69 8 PRO A 59 ? ? -69.82 5.19 70 8 PRO A 64 ? ? -69.77 -179.15 71 8 LEU A 80 ? ? -94.62 51.20 72 8 LEU A 90 ? ? -162.25 118.38 73 8 PRO A 98 ? ? -69.80 2.63 74 9 SER A 3 ? ? -84.37 46.46 75 9 SER A 23 ? ? -173.19 131.91 76 9 SER A 31 ? ? -97.67 47.37 77 9 SER A 36 ? ? -84.42 41.29 78 9 SER A 37 ? ? -96.42 -68.73 79 9 ASN A 38 ? ? -81.89 44.95 80 9 PRO A 59 ? ? -69.77 4.21 81 9 ALA A 61 ? ? -166.46 118.92 82 9 PRO A 64 ? ? -69.76 -179.39 83 9 SER A 102 ? ? -40.51 97.46 84 10 SER A 5 ? ? -100.38 41.74 85 10 SER A 23 ? ? -174.18 149.49 86 10 ASP A 32 ? ? 35.53 47.33 87 10 ASN A 33 ? ? -34.50 99.85 88 10 SER A 36 ? ? -63.57 74.52 89 10 ASP A 50 ? ? -174.58 145.26 90 10 PRO A 59 ? ? -69.82 3.80 91 10 LEU A 80 ? ? -86.21 49.94 92 10 PRO A 98 ? ? -69.74 2.82 93 11 ALA A 8 ? ? -39.03 144.74 94 11 ILE A 9 ? ? -36.12 121.01 95 11 SER A 31 ? ? -81.93 45.39 96 11 ASP A 32 ? ? -173.43 115.20 97 11 SER A 36 ? ? -103.37 51.57 98 11 SER A 37 ? ? -93.47 -69.83 99 11 ASN A 38 ? ? -84.71 38.64 100 11 ASP A 50 ? ? -170.45 137.07 101 11 PRO A 59 ? ? -69.78 4.02 102 11 ALA A 61 ? ? -165.73 116.57 103 11 PRO A 64 ? ? -69.80 -179.07 104 11 LEU A 80 ? ? -94.90 49.85 105 12 ASP A 13 ? ? 71.11 30.19 106 12 SER A 23 ? ? -175.11 138.14 107 12 SER A 31 ? ? -88.58 34.08 108 12 ASN A 38 ? ? -82.26 39.10 109 12 ASP A 50 ? ? -171.92 -176.71 110 12 PRO A 59 ? ? -69.70 3.86 111 12 PRO A 64 ? ? -69.79 -172.70 112 13 ASP A 13 ? ? 75.01 30.43 113 13 SER A 23 ? ? -175.05 149.20 114 13 SER A 31 ? ? -82.08 39.08 115 13 ASP A 32 ? ? 33.62 46.85 116 13 GLU A 34 ? ? -34.30 -38.57 117 13 SER A 36 ? ? -105.16 40.26 118 13 PRO A 59 ? ? -69.76 4.39 119 14 SER A 23 ? ? -175.22 149.38 120 14 SER A 35 ? ? 74.54 37.89 121 14 SER A 36 ? ? -82.23 41.35 122 14 PRO A 59 ? ? -69.77 4.18 123 14 LEU A 80 ? ? -93.17 44.95 124 14 PRO A 101 ? ? -69.73 88.67 125 14 SER A 102 ? ? -38.87 136.16 126 15 ASP A 32 ? ? -35.23 93.97 127 15 GLU A 34 ? ? -35.07 -39.42 128 15 PRO A 59 ? ? -69.76 4.14 129 15 LEU A 80 ? ? -86.61 47.85 130 15 PRO A 98 ? ? -69.81 3.38 131 16 SER A 5 ? ? -47.83 100.82 132 16 ILE A 9 ? ? -54.80 102.66 133 16 SER A 23 ? ? -174.57 144.37 134 16 SER A 31 ? ? -91.07 46.16 135 16 ASN A 33 ? ? -132.34 -35.72 136 16 SER A 36 ? ? -80.61 44.00 137 16 SER A 37 ? ? -103.47 -64.63 138 16 ASN A 38 ? ? -82.70 38.38 139 16 PRO A 59 ? ? -69.81 4.51 140 16 SER A 102 ? ? -172.71 142.94 141 17 SER A 31 ? ? -49.37 87.88 142 17 ASN A 33 ? ? 35.18 44.13 143 17 SER A 35 ? ? 36.89 51.04 144 17 THR A 49 ? ? 35.49 38.77 145 17 PRO A 59 ? ? -69.80 4.55 146 17 PRO A 64 ? ? -69.75 -177.00 147 17 LEU A 80 ? ? -98.66 39.06 148 17 VAL A 97 ? ? -35.66 124.37 149 17 PRO A 101 ? ? -69.76 2.90 150 17 SER A 102 ? ? -40.60 161.83 151 18 ALA A 8 ? ? -38.44 158.42 152 18 ASP A 32 ? ? -34.97 95.75 153 18 GLU A 34 ? ? -39.45 -35.47 154 18 THR A 49 ? ? -131.16 -38.63 155 18 SER A 57 ? ? -95.09 32.00 156 18 PRO A 59 ? ? -69.81 4.38 157 18 LEU A 80 ? ? -102.57 46.81 158 18 PRO A 98 ? ? -69.69 4.08 159 18 SER A 102 ? ? -66.79 89.49 160 19 SER A 5 ? ? -122.51 -61.16 161 19 SER A 23 ? ? -173.62 149.73 162 19 SER A 31 ? ? -108.78 43.80 163 19 ASP A 32 ? ? -175.29 112.83 164 19 SER A 36 ? ? -77.58 48.16 165 19 PRO A 59 ? ? -69.76 4.16 166 19 PRO A 101 ? ? -69.75 -179.84 167 20 ASP A 13 ? ? 72.34 33.15 168 20 SER A 36 ? ? -79.09 46.88 169 20 GLU A 48 ? ? -38.01 -34.83 170 20 PRO A 59 ? ? -69.73 4.45 171 20 PRO A 64 ? ? -69.79 -179.67 172 20 PRO A 98 ? ? -69.76 7.60 173 20 PRO A 101 ? ? -69.74 -178.43 #