HEADER TRANSCRIPTION 26-APR-06 2DNP TITLE SOLUTION STRUCTURE OF RNA BINDING DOMAIN 2 IN RNA-BINDING PROTEIN 14 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-BINDING PROTEIN 14; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RNA RECOGNITION MOTIF; COMPND 5 SYNONYM: RNA-BINDING MOTIF PROTEIN 14, RRM-CONTAINING COACTIVATOR COMPND 6 ACTIVATOR/MODULATOR, SYNAPTOTAGMIN-INTERACTING PROTEIN, SYT- COMPND 7 INTERACTING PROTEIN; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RBM14; SOURCE 6 EXPRESSION_SYSTEM: CELL FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P051121-02; SOURCE 9 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS RRM DOMAIN, RBD, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON KEYWDS 2 PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.KUSUHARA,K.TSUDA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2DNP 1 REMARK SEQADV REVDAT 2 24-FEB-09 2DNP 1 VERSN REVDAT 1 26-OCT-06 2DNP 0 JRNL AUTH M.KUSUHARA,K.TSUDA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, JRNL AUTH 2 M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RNA BINDING DOMAIN 2 IN RNA-BINDING JRNL TITL 2 PROTEIN 14 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT,P (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DNP COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-MAY-06. REMARK 100 THE DEPOSITION ID IS D_1000025627. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.66MM 13C-15N PROTEIN, 20MM D REMARK 210 -TRIS-HCL(PH7.0), 100MM NACL, REMARK 210 1MM D-DTT, 0.02% NAN3; 90% H2O, REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9736, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINTED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH REMARK 210 THE LOWEST ENERGY, STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 78 156.62 -48.07 REMARK 500 1 GLN A 93 -39.27 -39.53 REMARK 500 1 LYS A 112 -75.90 -31.69 REMARK 500 1 GLU A 120 -63.60 -91.94 REMARK 500 1 ASN A 133 97.14 -45.85 REMARK 500 1 LYS A 135 123.71 -34.25 REMARK 500 1 PRO A 156 -180.00 -69.74 REMARK 500 2 THR A 78 161.37 -41.27 REMARK 500 2 SER A 87 130.30 -39.63 REMARK 500 2 ALA A 89 32.58 -97.60 REMARK 500 2 LYS A 112 -76.06 -32.29 REMARK 500 2 ASN A 133 94.63 -45.74 REMARK 500 2 LYS A 135 123.25 -37.39 REMARK 500 3 SER A 75 -52.14 -127.65 REMARK 500 3 ALA A 89 34.29 -91.42 REMARK 500 3 GLN A 93 -39.49 -39.15 REMARK 500 3 LYS A 112 -75.97 -32.07 REMARK 500 3 ASN A 133 91.12 -46.18 REMARK 500 3 LYS A 135 129.47 -35.51 REMARK 500 3 SER A 158 163.80 -48.18 REMARK 500 4 ALA A 89 32.22 -92.52 REMARK 500 4 CYS A 108 109.01 -175.10 REMARK 500 4 LYS A 112 -75.85 -31.21 REMARK 500 4 GLU A 120 -72.15 -85.80 REMARK 500 4 ASN A 133 99.21 -46.35 REMARK 500 4 LYS A 135 125.03 -35.77 REMARK 500 4 THR A 148 98.90 -48.04 REMARK 500 4 SER A 157 117.12 -36.89 REMARK 500 5 SER A 72 43.33 -106.12 REMARK 500 5 ALA A 89 31.84 -92.37 REMARK 500 5 LYS A 112 -76.07 -32.42 REMARK 500 5 ASN A 133 94.85 -44.97 REMARK 500 5 LYS A 135 120.39 -34.57 REMARK 500 5 SER A 157 99.60 -62.08 REMARK 500 6 SER A 72 -47.51 -132.75 REMARK 500 6 SER A 87 126.02 -37.24 REMARK 500 6 ALA A 89 32.93 -93.63 REMARK 500 6 LYS A 112 -75.53 -30.23 REMARK 500 6 ASN A 133 94.58 -46.90 REMARK 500 6 LYS A 135 125.72 -37.67 REMARK 500 6 SER A 154 124.37 -174.48 REMARK 500 6 PRO A 156 96.07 -69.80 REMARK 500 7 ALA A 89 32.99 -89.65 REMARK 500 7 LYS A 112 -75.81 -31.80 REMARK 500 7 ASN A 133 92.93 -46.23 REMARK 500 7 LYS A 135 122.82 -34.34 REMARK 500 8 SER A 87 137.37 -39.64 REMARK 500 8 ALA A 89 34.63 -92.85 REMARK 500 8 LYS A 112 -75.48 -30.81 REMARK 500 8 ASN A 133 93.10 -45.59 REMARK 500 REMARK 500 THIS ENTRY HAS 144 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSS001001538.1 RELATED DB: TARGETDB DBREF 2DNP A 77 153 UNP Q96PK6 RBM14_HUMAN 77 153 SEQADV 2DNP GLY A 70 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP SER A 71 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP SER A 72 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP GLY A 73 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP SER A 74 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP SER A 75 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP GLY A 76 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP SER A 154 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP GLY A 155 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP PRO A 156 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP SER A 157 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP SER A 158 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP GLY A 159 UNP Q96PK6 CLONING ARTIFACT SEQRES 1 A 90 GLY SER SER GLY SER SER GLY ASN THR TRP LYS ILE PHE SEQRES 2 A 90 VAL GLY ASN VAL SER ALA ALA CYS THR SER GLN GLU LEU SEQRES 3 A 90 ARG SER LEU PHE GLU ARG ARG GLY ARG VAL ILE GLU CYS SEQRES 4 A 90 ASP VAL VAL LYS ASP TYR ALA PHE VAL HIS MET GLU LYS SEQRES 5 A 90 GLU ALA ASP ALA LYS ALA ALA ILE ALA GLN LEU ASN GLY SEQRES 6 A 90 LYS GLU VAL LYS GLY LYS ARG ILE ASN VAL GLU LEU SER SEQRES 7 A 90 THR LYS GLY GLN LYS LYS SER GLY PRO SER SER GLY HELIX 1 1 THR A 91 GLY A 103 1 13 HELIX 2 2 LYS A 121 ASN A 133 1 13 SHEET 1 A 4 VAL A 105 VAL A 110 0 SHEET 2 A 4 ALA A 115 MET A 119 -1 O HIS A 118 N GLU A 107 SHEET 3 A 4 ILE A 81 GLY A 84 -1 N ILE A 81 O VAL A 117 SHEET 4 A 4 ASN A 143 LEU A 146 -1 O ASN A 143 N GLY A 84 SHEET 1 B 2 GLU A 136 VAL A 137 0 SHEET 2 B 2 LYS A 140 ARG A 141 -1 O LYS A 140 N VAL A 137 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1