data_2DO3 # _entry.id 2DO3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DO3 pdb_00002do3 10.2210/pdb2do3/pdb RCSB RCSB025641 ? ? WWPDB D_1000025641 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk003001095.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DO3 _pdbx_database_status.recvd_initial_deposition_date 2006-04-27 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tanabe, W.' 1 'Suzuki, S.' 2 'Muto, Y.' 3 'Inoue, M.' 4 'Kigawa, T.' 5 'Terada, T.' 6 'Shirouzu, M.' 7 'Yokoyama, S.' 8 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 9 # _citation.id primary _citation.title 'Solution structure of the third KOW motif of transcription elongation factor SPT5' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Suzuki, S.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Terada, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Transcription elongation factor SPT5' _entity.formula_weight 7738.830 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'KOW motif' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name ;hSPT5, DRB sensitivity-inducing factor large subunit, DSIF large subunit, DSIF p160, Tat- cotransactivator 1 protein, Tat-CT1 protein ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSSGSSGEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSE _entity_poly.pdbx_seq_one_letter_code_can GSSGSSGEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSE _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk003001095.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 GLU n 1 9 PHE n 1 10 PRO n 1 11 ALA n 1 12 GLN n 1 13 GLU n 1 14 LEU n 1 15 ARG n 1 16 LYS n 1 17 TYR n 1 18 PHE n 1 19 LYS n 1 20 MET n 1 21 GLY n 1 22 ASP n 1 23 HIS n 1 24 VAL n 1 25 LYS n 1 26 VAL n 1 27 ILE n 1 28 ALA n 1 29 GLY n 1 30 ARG n 1 31 PHE n 1 32 GLU n 1 33 GLY n 1 34 ASP n 1 35 THR n 1 36 GLY n 1 37 LEU n 1 38 ILE n 1 39 VAL n 1 40 ARG n 1 41 VAL n 1 42 GLU n 1 43 GLU n 1 44 ASN n 1 45 PHE n 1 46 VAL n 1 47 ILE n 1 48 LEU n 1 49 PHE n 1 50 SER n 1 51 ASP n 1 52 LEU n 1 53 THR n 1 54 MET n 1 55 HIS n 1 56 GLU n 1 57 LEU n 1 58 LYS n 1 59 VAL n 1 60 LEU n 1 61 PRO n 1 62 ARG n 1 63 ASP n 1 64 LEU n 1 65 GLN n 1 66 LEU n 1 67 CYS n 1 68 SER n 1 69 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene SUPT5H _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Cell free synthesis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P060130-01 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SPT5H_HUMAN _struct_ref.pdbx_db_accession O00267 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 462 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2DO3 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 69 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O00267 _struct_ref_seq.db_align_beg 462 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 523 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 462 _struct_ref_seq.pdbx_auth_seq_align_end 523 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2DO3 GLY A 1 ? UNP O00267 ? ? 'cloning artifact' 455 1 1 2DO3 SER A 2 ? UNP O00267 ? ? 'cloning artifact' 456 2 1 2DO3 SER A 3 ? UNP O00267 ? ? 'cloning artifact' 457 3 1 2DO3 GLY A 4 ? UNP O00267 ? ? 'cloning artifact' 458 4 1 2DO3 SER A 5 ? UNP O00267 ? ? 'cloning artifact' 459 5 1 2DO3 SER A 6 ? UNP O00267 ? ? 'cloning artifact' 460 6 1 2DO3 GLY A 7 ? UNP O00267 ? ? 'cloning artifact' 461 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.1mM 13C/15N-PROTEIN; 20mM d-Tris-HCl(pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2DO3 _pdbx_nmr_refine.method 'torsion angle dyanamics, simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2DO3 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the lowest energy, structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2DO3 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9742 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2DO3 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2DO3 _struct.title 'Solution structure of the third KOW motif of transcription elongation factor SPT5' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DO3 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text ;KOW motif, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSCRIPTION ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 56 ? VAL A 59 ? GLU A 510 VAL A 513 A 2 VAL A 46 ? SER A 50 ? VAL A 500 SER A 504 A 3 ASP A 34 ? VAL A 41 ? ASP A 488 VAL A 495 A 4 HIS A 23 ? VAL A 26 ? HIS A 477 VAL A 480 A 5 LEU A 64 ? LEU A 66 ? LEU A 518 LEU A 520 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 59 ? O VAL A 513 N VAL A 46 ? N VAL A 500 A 2 3 O PHE A 49 ? O PHE A 503 N LEU A 37 ? N LEU A 491 A 3 4 O GLY A 36 ? O GLY A 490 N VAL A 24 ? N VAL A 478 A 4 5 N LYS A 25 ? N LYS A 479 O GLN A 65 ? O GLN A 519 # _database_PDB_matrix.entry_id 2DO3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2DO3 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 455 455 GLY GLY A . n A 1 2 SER 2 456 456 SER SER A . n A 1 3 SER 3 457 457 SER SER A . n A 1 4 GLY 4 458 458 GLY GLY A . n A 1 5 SER 5 459 459 SER SER A . n A 1 6 SER 6 460 460 SER SER A . n A 1 7 GLY 7 461 461 GLY GLY A . n A 1 8 GLU 8 462 462 GLU GLU A . n A 1 9 PHE 9 463 463 PHE PHE A . n A 1 10 PRO 10 464 464 PRO PRO A . n A 1 11 ALA 11 465 465 ALA ALA A . n A 1 12 GLN 12 466 466 GLN GLN A . n A 1 13 GLU 13 467 467 GLU GLU A . n A 1 14 LEU 14 468 468 LEU LEU A . n A 1 15 ARG 15 469 469 ARG ARG A . n A 1 16 LYS 16 470 470 LYS LYS A . n A 1 17 TYR 17 471 471 TYR TYR A . n A 1 18 PHE 18 472 472 PHE PHE A . n A 1 19 LYS 19 473 473 LYS LYS A . n A 1 20 MET 20 474 474 MET MET A . n A 1 21 GLY 21 475 475 GLY GLY A . n A 1 22 ASP 22 476 476 ASP ASP A . n A 1 23 HIS 23 477 477 HIS HIS A . n A 1 24 VAL 24 478 478 VAL VAL A . n A 1 25 LYS 25 479 479 LYS LYS A . n A 1 26 VAL 26 480 480 VAL VAL A . n A 1 27 ILE 27 481 481 ILE ILE A . n A 1 28 ALA 28 482 482 ALA ALA A . n A 1 29 GLY 29 483 483 GLY GLY A . n A 1 30 ARG 30 484 484 ARG ARG A . n A 1 31 PHE 31 485 485 PHE PHE A . n A 1 32 GLU 32 486 486 GLU GLU A . n A 1 33 GLY 33 487 487 GLY GLY A . n A 1 34 ASP 34 488 488 ASP ASP A . n A 1 35 THR 35 489 489 THR THR A . n A 1 36 GLY 36 490 490 GLY GLY A . n A 1 37 LEU 37 491 491 LEU LEU A . n A 1 38 ILE 38 492 492 ILE ILE A . n A 1 39 VAL 39 493 493 VAL VAL A . n A 1 40 ARG 40 494 494 ARG ARG A . n A 1 41 VAL 41 495 495 VAL VAL A . n A 1 42 GLU 42 496 496 GLU GLU A . n A 1 43 GLU 43 497 497 GLU GLU A . n A 1 44 ASN 44 498 498 ASN ASN A . n A 1 45 PHE 45 499 499 PHE PHE A . n A 1 46 VAL 46 500 500 VAL VAL A . n A 1 47 ILE 47 501 501 ILE ILE A . n A 1 48 LEU 48 502 502 LEU LEU A . n A 1 49 PHE 49 503 503 PHE PHE A . n A 1 50 SER 50 504 504 SER SER A . n A 1 51 ASP 51 505 505 ASP ASP A . n A 1 52 LEU 52 506 506 LEU LEU A . n A 1 53 THR 53 507 507 THR THR A . n A 1 54 MET 54 508 508 MET MET A . n A 1 55 HIS 55 509 509 HIS HIS A . n A 1 56 GLU 56 510 510 GLU GLU A . n A 1 57 LEU 57 511 511 LEU LEU A . n A 1 58 LYS 58 512 512 LYS LYS A . n A 1 59 VAL 59 513 513 VAL VAL A . n A 1 60 LEU 60 514 514 LEU LEU A . n A 1 61 PRO 61 515 515 PRO PRO A . n A 1 62 ARG 62 516 516 ARG ARG A . n A 1 63 ASP 63 517 517 ASP ASP A . n A 1 64 LEU 64 518 518 LEU LEU A . n A 1 65 GLN 65 519 519 GLN GLN A . n A 1 66 LEU 66 520 520 LEU LEU A . n A 1 67 CYS 67 521 521 CYS CYS A . n A 1 68 SER 68 522 522 SER SER A . n A 1 69 GLU 69 523 523 GLU GLU A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-10-27 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 462 ? ? -59.79 81.87 2 1 TYR A 471 ? ? -47.17 109.46 3 1 ASN A 498 ? ? -94.85 -61.03 4 2 PRO A 515 ? ? -69.78 2.78 5 3 GLU A 462 ? ? -35.17 143.10 6 3 ALA A 465 ? ? -54.16 107.68 7 3 GLU A 467 ? ? -96.01 38.48 8 3 LYS A 470 ? ? -86.22 40.71 9 3 ASN A 498 ? ? -97.81 -61.35 10 4 PHE A 485 ? ? -103.75 40.02 11 5 GLU A 486 ? ? -39.67 121.81 12 5 ASN A 498 ? ? -98.36 -61.52 13 5 SER A 522 ? ? -101.90 -66.26 14 6 GLU A 467 ? ? -57.10 104.23 15 6 PHE A 485 ? ? -103.09 41.68 16 6 GLU A 486 ? ? -56.83 108.87 17 6 ASN A 498 ? ? -90.03 -62.17 18 6 MET A 508 ? ? 35.14 50.85 19 6 PRO A 515 ? ? -69.73 1.86 20 7 SER A 457 ? ? -62.82 99.42 21 7 GLU A 486 ? ? -59.37 106.52 22 7 MET A 508 ? ? 35.08 49.06 23 8 SER A 456 ? ? -47.67 150.83 24 8 LYS A 470 ? ? -111.27 69.31 25 8 PRO A 515 ? ? -69.80 1.37 26 8 ASP A 517 ? ? -106.76 40.31 27 9 SER A 459 ? ? -36.63 106.19 28 9 SER A 460 ? ? -161.39 106.84 29 9 ASN A 498 ? ? -98.95 -66.48 30 9 LEU A 506 ? ? -90.81 -73.77 31 9 CYS A 521 ? ? -122.75 -50.40 32 9 SER A 522 ? ? -107.49 45.33 33 10 GLU A 467 ? ? -104.08 58.25 34 10 LEU A 468 ? ? -100.11 56.38 35 10 PRO A 515 ? ? -69.85 2.10 36 11 SER A 457 ? ? -67.53 96.24 37 12 GLU A 462 ? ? -127.96 -55.64 38 12 PRO A 464 ? ? -69.76 94.22 39 12 MET A 508 ? ? 36.30 35.23 40 12 PRO A 515 ? ? -69.72 0.86 41 13 LYS A 470 ? ? -38.03 103.25 42 13 PHE A 472 ? ? -62.16 98.65 43 13 MET A 474 ? ? -34.61 128.92 44 13 CYS A 521 ? ? -134.23 -42.41 45 13 SER A 522 ? ? -119.58 56.84 46 14 LYS A 470 ? ? -97.18 51.94 47 14 GLU A 486 ? ? -56.95 108.62 48 15 SER A 457 ? ? -45.87 166.63 49 15 MET A 474 ? ? -36.81 133.05 50 15 SER A 522 ? ? 71.94 53.61 51 16 LEU A 468 ? ? -52.78 179.82 52 16 PHE A 472 ? ? -59.30 100.48 53 16 GLU A 486 ? ? -58.80 108.52 54 16 ASN A 498 ? ? -95.62 -65.57 55 16 LEU A 506 ? ? -93.01 -67.97 56 16 MET A 508 ? ? 34.52 49.61 57 17 SER A 457 ? ? -90.15 42.21 58 17 GLN A 466 ? ? -38.84 106.51 59 17 MET A 474 ? ? -38.33 132.27 60 17 PRO A 515 ? ? -69.80 2.28 61 17 SER A 522 ? ? 70.17 31.24 62 18 SER A 460 ? ? -43.11 155.31 63 18 GLN A 466 ? ? -39.56 114.06 64 18 LYS A 470 ? ? -109.80 50.87 65 18 PHE A 472 ? ? -52.71 98.83 66 18 MET A 474 ? ? -34.65 132.73 67 18 PRO A 515 ? ? -69.76 1.24 68 19 PRO A 464 ? ? -69.76 96.11 69 19 ARG A 469 ? ? -36.89 139.62 70 19 PHE A 485 ? ? -105.97 41.28 71 19 MET A 508 ? ? 36.64 49.64 72 20 ALA A 465 ? ? -39.46 139.17 73 20 LYS A 470 ? ? -43.58 90.94 74 20 MET A 508 ? ? 35.10 54.86 #