HEADER LIGASE 18-MAY-06 2DQ3 TITLE CRYSTAL STRUCTURE OF AQ_298 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERYL-TRNA SYNTHETASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SERINE--TRNA LIGASE, SERRS; COMPND 5 EC: 6.1.1.11; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS; SOURCE 3 ORGANISM_TAXID: 224324; SOURCE 4 STRAIN: VF5; SOURCE 5 GENE: SERS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B834(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET25B KEYWDS COILED-COIL, HOMODIMER, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT KEYWDS 2 ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.ITOH,S.SEKINE,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 5 15-NOV-23 2DQ3 1 REMARK REVDAT 4 25-OCT-23 2DQ3 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 2DQ3 1 VERSN REVDAT 2 24-FEB-09 2DQ3 1 VERSN REVDAT 1 05-JUN-07 2DQ3 0 JRNL AUTH Y.ITOH,S.SEKINE,S.YOKOYAMA JRNL TITL CRYSTAL STRUCTURE OF AQ_298 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.44 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1547843.810 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 22492 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.297 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1093 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.19 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3315 REMARK 3 BIN R VALUE (WORKING SET) : 0.3520 REMARK 3 BIN FREE R VALUE : 0.4240 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 163 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.033 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6968 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 81 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 8.48000 REMARK 3 B22 (A**2) : 8.48000 REMARK 3 B33 (A**2) : -16.96000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.37 REMARK 3 ESD FROM SIGMAA (A) : 0.49 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.54 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.59 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.030 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.270 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.190 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.800 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.830 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.27 REMARK 3 BSOL : 18.52 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : SSA_PRODRG_ADD.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER_REP.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : SSA_PRODRG.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DQ3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-MAY-06. REMARK 100 THE DEPOSITION ID IS D_1000025708. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : ADSC REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22512 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : 0.07300 REMARK 200 FOR THE DATA SET : 26.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.45600 REMARK 200 R SYM FOR SHELL (I) : 0.45600 REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1SET REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% PEG 4000, 0.1M SODIUM ACETATE, 20MM REMARK 280 TRIS-HCL, PH 7.8, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.33000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 20.16500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 60.49500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ASYMMERTRIC UNIT CONTAINS A FUANCTIONAL HOMODIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 191 OD1 ASP A 305 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 22 119.31 -167.94 REMARK 500 GLU A 66 117.36 54.69 REMARK 500 THR A 70 52.52 -60.58 REMARK 500 THR A 71 -42.70 -162.59 REMARK 500 GLN A 74 1.73 -68.89 REMARK 500 ARG A 126 153.57 171.81 REMARK 500 PHE A 214 45.35 -108.11 REMARK 500 CYS A 221 78.94 -100.65 REMARK 500 TYR A 240 68.38 -113.19 REMARK 500 GLU A 264 46.09 38.03 REMARK 500 ALA A 267 84.37 -60.00 REMARK 500 ASP A 271 71.47 48.83 REMARK 500 GLU A 349 119.32 -38.09 REMARK 500 GLU A 357 -126.03 44.43 REMARK 500 ASN A 365 63.61 65.61 REMARK 500 LYS A 372 -111.84 -99.94 REMARK 500 THR A 373 -29.22 -34.49 REMARK 500 LEU A 387 118.88 81.83 REMARK 500 PRO A 424 98.96 -38.57 REMARK 500 LYS B 10 51.78 -157.20 REMARK 500 ASP B 12 -71.73 -53.77 REMARK 500 ASP B 22 124.58 -171.23 REMARK 500 GLU B 66 107.63 65.62 REMARK 500 THR B 70 52.74 -63.51 REMARK 500 THR B 71 -59.08 -148.99 REMARK 500 SER B 112 -36.03 -34.38 REMARK 500 ARG B 126 165.32 168.03 REMARK 500 CYS B 221 70.79 -104.99 REMARK 500 THR B 231 144.38 -177.30 REMARK 500 VAL B 234 -70.85 -56.07 REMARK 500 GLU B 264 44.12 32.90 REMARK 500 ALA B 267 87.33 -52.22 REMARK 500 SER B 295 -70.99 -35.28 REMARK 500 PHE B 329 -46.38 -24.56 REMARK 500 GLU B 357 -120.14 43.79 REMARK 500 LYS B 372 -104.18 -95.72 REMARK 500 LEU B 387 119.85 91.32 REMARK 500 VAL B 417 -70.35 -67.98 REMARK 500 PRO B 424 91.43 -38.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SSA A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SSA B 1002 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: AAE001000298.1 RELATED DB: TARGETDB DBREF 2DQ3 A 1 425 UNP O66647 SYS_AQUAE 1 425 DBREF 2DQ3 B 1 425 UNP O66647 SYS_AQUAE 1 425 SEQADV 2DQ3 MSE A 1 UNP O66647 MET 1 MODIFIED RESIDUE SEQADV 2DQ3 MSE A 182 UNP O66647 MET 182 MODIFIED RESIDUE SEQADV 2DQ3 MSE A 364 UNP O66647 MET 364 MODIFIED RESIDUE SEQADV 2DQ3 MSE B 1 UNP O66647 MET 1 MODIFIED RESIDUE SEQADV 2DQ3 MSE B 182 UNP O66647 MET 182 MODIFIED RESIDUE SEQADV 2DQ3 MSE B 364 UNP O66647 MET 364 MODIFIED RESIDUE SEQRES 1 A 425 MSE ILE ASP ILE ASN LEU ILE ARG GLU LYS PRO ASP TYR SEQRES 2 A 425 VAL LYS GLU ARG LEU ALA THR ARG ASP LYS GLU LEU VAL SEQRES 3 A 425 SER LEU VAL ASP LYS VAL LEU GLU LEU ASP LYS ARG ARG SEQRES 4 A 425 ARG GLU ILE ILE LYS ARG LEU GLU ALA LEU ARG SER GLU SEQRES 5 A 425 ARG ASN LYS LEU SER LYS GLU ILE GLY LYS LEU LYS ARG SEQRES 6 A 425 GLU GLY LYS ASP THR THR GLU ILE GLN ASN ARG VAL LYS SEQRES 7 A 425 GLU LEU LYS GLU GLU ILE ASP ARG LEU GLU GLU GLU LEU SEQRES 8 A 425 ARG LYS VAL GLU GLU GLU LEU LYS ASN THR LEU LEU TRP SEQRES 9 A 425 ILE PRO ASN LEU PRO HIS PRO SER VAL PRO VAL GLY GLU SEQRES 10 A 425 ASP GLU LYS ASP ASN VAL GLU VAL ARG ARG TRP GLY GLU SEQRES 11 A 425 PRO ARG LYS PHE ASP PHE GLU PRO LYS PRO HIS TRP GLU SEQRES 12 A 425 ILE GLY GLU ARG LEU GLY ILE LEU ASP PHE LYS ARG GLY SEQRES 13 A 425 ALA LYS LEU SER GLY SER ARG PHE THR VAL ILE ALA GLY SEQRES 14 A 425 TRP GLY ALA ARG LEU GLU ARG ALA LEU ILE ASN PHE MSE SEQRES 15 A 425 LEU ASP LEU HIS THR LYS LYS GLY TYR LYS GLU ILE CYS SEQRES 16 A 425 PRO PRO HIS LEU VAL LYS PRO GLU ILE LEU ILE GLY THR SEQRES 17 A 425 GLY GLN LEU PRO LYS PHE GLU GLU ASP LEU TYR LYS CYS SEQRES 18 A 425 GLU ARG ASP ASN LEU TYR LEU ILE PRO THR ALA GLU VAL SEQRES 19 A 425 PRO LEU THR ASN LEU TYR ARG GLU GLU ILE LEU LYS GLU SEQRES 20 A 425 GLU ASN LEU PRO ILE TYR LEU THR ALA TYR THR PRO CYS SEQRES 21 A 425 TYR ARG ARG GLU ALA GLY ALA TYR GLY LYS ASP ILE ARG SEQRES 22 A 425 GLY ILE ILE ARG GLN HIS GLN PHE ASP LYS VAL GLU LEU SEQRES 23 A 425 VAL LYS ILE VAL HIS PRO ASP THR SER TYR ASP GLU LEU SEQRES 24 A 425 GLU LYS LEU VAL LYS ASP ALA GLU GLU VAL LEU GLN LEU SEQRES 25 A 425 LEU GLY LEU PRO TYR ARG VAL VAL GLU LEU CYS THR GLY SEQRES 26 A 425 ASP LEU GLY PHE SER ALA ALA LYS THR TYR ASP ILE GLU SEQRES 27 A 425 VAL TRP PHE PRO SER GLN ASN LYS TYR ARG GLU ILE SER SEQRES 28 A 425 SER CYS SER ASN CYS GLU ASP PHE GLN ALA ARG ARG MSE SEQRES 29 A 425 ASN THR ARG PHE LYS ASP SER LYS THR GLY LYS ASN ARG SEQRES 30 A 425 PHE VAL HIS THR LEU ASN GLY SER GLY LEU ALA VAL GLY SEQRES 31 A 425 ARG THR LEU ALA ALA ILE LEU GLU ASN TYR GLN GLN GLU SEQRES 32 A 425 ASP GLY SER VAL VAL VAL PRO GLU VAL LEU ARG ASP TYR SEQRES 33 A 425 VAL GLY THR ASP VAL ILE ARG PRO GLU SEQRES 1 B 425 MSE ILE ASP ILE ASN LEU ILE ARG GLU LYS PRO ASP TYR SEQRES 2 B 425 VAL LYS GLU ARG LEU ALA THR ARG ASP LYS GLU LEU VAL SEQRES 3 B 425 SER LEU VAL ASP LYS VAL LEU GLU LEU ASP LYS ARG ARG SEQRES 4 B 425 ARG GLU ILE ILE LYS ARG LEU GLU ALA LEU ARG SER GLU SEQRES 5 B 425 ARG ASN LYS LEU SER LYS GLU ILE GLY LYS LEU LYS ARG SEQRES 6 B 425 GLU GLY LYS ASP THR THR GLU ILE GLN ASN ARG VAL LYS SEQRES 7 B 425 GLU LEU LYS GLU GLU ILE ASP ARG LEU GLU GLU GLU LEU SEQRES 8 B 425 ARG LYS VAL GLU GLU GLU LEU LYS ASN THR LEU LEU TRP SEQRES 9 B 425 ILE PRO ASN LEU PRO HIS PRO SER VAL PRO VAL GLY GLU SEQRES 10 B 425 ASP GLU LYS ASP ASN VAL GLU VAL ARG ARG TRP GLY GLU SEQRES 11 B 425 PRO ARG LYS PHE ASP PHE GLU PRO LYS PRO HIS TRP GLU SEQRES 12 B 425 ILE GLY GLU ARG LEU GLY ILE LEU ASP PHE LYS ARG GLY SEQRES 13 B 425 ALA LYS LEU SER GLY SER ARG PHE THR VAL ILE ALA GLY SEQRES 14 B 425 TRP GLY ALA ARG LEU GLU ARG ALA LEU ILE ASN PHE MSE SEQRES 15 B 425 LEU ASP LEU HIS THR LYS LYS GLY TYR LYS GLU ILE CYS SEQRES 16 B 425 PRO PRO HIS LEU VAL LYS PRO GLU ILE LEU ILE GLY THR SEQRES 17 B 425 GLY GLN LEU PRO LYS PHE GLU GLU ASP LEU TYR LYS CYS SEQRES 18 B 425 GLU ARG ASP ASN LEU TYR LEU ILE PRO THR ALA GLU VAL SEQRES 19 B 425 PRO LEU THR ASN LEU TYR ARG GLU GLU ILE LEU LYS GLU SEQRES 20 B 425 GLU ASN LEU PRO ILE TYR LEU THR ALA TYR THR PRO CYS SEQRES 21 B 425 TYR ARG ARG GLU ALA GLY ALA TYR GLY LYS ASP ILE ARG SEQRES 22 B 425 GLY ILE ILE ARG GLN HIS GLN PHE ASP LYS VAL GLU LEU SEQRES 23 B 425 VAL LYS ILE VAL HIS PRO ASP THR SER TYR ASP GLU LEU SEQRES 24 B 425 GLU LYS LEU VAL LYS ASP ALA GLU GLU VAL LEU GLN LEU SEQRES 25 B 425 LEU GLY LEU PRO TYR ARG VAL VAL GLU LEU CYS THR GLY SEQRES 26 B 425 ASP LEU GLY PHE SER ALA ALA LYS THR TYR ASP ILE GLU SEQRES 27 B 425 VAL TRP PHE PRO SER GLN ASN LYS TYR ARG GLU ILE SER SEQRES 28 B 425 SER CYS SER ASN CYS GLU ASP PHE GLN ALA ARG ARG MSE SEQRES 29 B 425 ASN THR ARG PHE LYS ASP SER LYS THR GLY LYS ASN ARG SEQRES 30 B 425 PHE VAL HIS THR LEU ASN GLY SER GLY LEU ALA VAL GLY SEQRES 31 B 425 ARG THR LEU ALA ALA ILE LEU GLU ASN TYR GLN GLN GLU SEQRES 32 B 425 ASP GLY SER VAL VAL VAL PRO GLU VAL LEU ARG ASP TYR SEQRES 33 B 425 VAL GLY THR ASP VAL ILE ARG PRO GLU MODRES 2DQ3 MSE A 1 MET SELENOMETHIONINE MODRES 2DQ3 MSE A 182 MET SELENOMETHIONINE MODRES 2DQ3 MSE A 364 MET SELENOMETHIONINE MODRES 2DQ3 MSE B 1 MET SELENOMETHIONINE MODRES 2DQ3 MSE B 182 MET SELENOMETHIONINE MODRES 2DQ3 MSE B 364 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 182 8 HET MSE A 364 8 HET MSE B 1 8 HET MSE B 182 8 HET MSE B 364 8 HET SSA A1001 29 HET SSA B1002 29 HETNAM MSE SELENOMETHIONINE HETNAM SSA 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 SSA 2(C13 H19 N7 O8 S) FORMUL 5 HOH *81(H2 O) HELIX 1 1 ASP A 3 LYS A 10 1 8 HELIX 2 2 LYS A 10 ALA A 19 1 10 HELIX 3 3 THR A 20 ARG A 21 5 2 HELIX 4 4 ASP A 22 GLU A 24 5 3 HELIX 5 5 LEU A 25 ILE A 60 1 36 HELIX 6 6 GLY A 61 ARG A 65 5 5 HELIX 7 7 ASN A 75 TRP A 104 1 30 HELIX 8 8 ASP A 118 ASN A 122 5 5 HELIX 9 9 PRO A 140 LEU A 148 1 9 HELIX 10 10 PHE A 153 GLY A 161 1 9 HELIX 11 11 GLY A 169 LYS A 189 1 21 HELIX 12 12 LYS A 201 GLY A 209 1 9 HELIX 13 13 PHE A 214 LEU A 218 5 5 HELIX 14 14 ALA A 232 ASN A 238 1 7 HELIX 15 15 LEU A 239 ARG A 241 5 3 HELIX 16 16 HIS A 291 ASP A 293 5 3 HELIX 17 17 THR A 294 GLY A 314 1 21 HELIX 18 18 PRO A 342 ASN A 345 5 4 HELIX 19 19 ASP A 358 ASN A 365 1 8 HELIX 20 20 VAL A 389 TYR A 400 1 12 HELIX 21 21 LEU A 413 GLY A 418 1 6 HELIX 22 22 ASP B 3 LYS B 10 1 8 HELIX 23 23 LYS B 10 ASP B 22 1 13 HELIX 24 24 LEU B 25 ILE B 60 1 36 HELIX 25 25 VAL B 77 LEU B 103 1 27 HELIX 26 26 ASP B 118 ASN B 122 5 5 HELIX 27 27 PRO B 140 LEU B 148 1 9 HELIX 28 28 PHE B 153 GLY B 161 1 9 HELIX 29 29 GLY B 169 GLY B 190 1 22 HELIX 30 30 LYS B 201 THR B 208 1 8 HELIX 31 31 PHE B 214 LEU B 218 5 5 HELIX 32 32 ALA B 232 ASN B 238 1 7 HELIX 33 33 LEU B 239 ARG B 241 5 3 HELIX 34 34 HIS B 291 ASP B 293 5 3 HELIX 35 35 THR B 294 LEU B 313 1 20 HELIX 36 36 ASP B 358 ASN B 365 1 8 HELIX 37 37 ALA B 388 TYR B 400 1 13 HELIX 38 38 PRO B 410 VAL B 412 5 3 HELIX 39 39 LEU B 413 GLY B 418 1 6 SHEET 1 A10 VAL A 123 TRP A 128 0 SHEET 2 A10 TYR A 317 GLU A 321 -1 O VAL A 319 N ARG A 126 SHEET 3 A10 LYS A 333 PHE A 341 -1 O ASP A 336 N VAL A 320 SHEET 4 A10 LYS A 346 ASN A 355 -1 O ILE A 350 N ILE A 337 SHEET 5 A10 HIS A 380 ALA A 388 -1 O ASN A 383 N SER A 354 SHEET 6 A10 GLN A 280 VAL A 290 -1 N VAL A 284 O GLY A 386 SHEET 7 A10 ILE A 252 TYR A 261 -1 N ILE A 252 O ILE A 289 SHEET 8 A10 LYS A 192 CYS A 195 1 N LYS A 192 O TYR A 253 SHEET 9 A10 VAL B 166 ALA B 168 -1 O ILE B 167 N CYS A 195 SHEET 10 A10 LEU B 151 ASP B 152 -1 N ASP B 152 O VAL B 166 SHEET 1 B10 LEU A 151 ASP A 152 0 SHEET 2 B10 VAL A 166 ALA A 168 -1 O VAL A 166 N ASP A 152 SHEET 3 B10 LYS B 192 CYS B 195 -1 O CYS B 195 N ILE A 167 SHEET 4 B10 ILE B 252 TYR B 261 1 O THR B 255 N LYS B 192 SHEET 5 B10 GLN B 280 VAL B 290 -1 O ILE B 289 N ILE B 252 SHEET 6 B10 HIS B 380 SER B 385 -1 O LEU B 382 N LYS B 288 SHEET 7 B10 LYS B 346 ASN B 355 -1 N SER B 354 O ASN B 383 SHEET 8 B10 LYS B 333 PHE B 341 -1 N ILE B 337 O ILE B 350 SHEET 9 B10 TYR B 317 GLU B 321 -1 N VAL B 320 O ASP B 336 SHEET 10 B10 VAL B 123 TRP B 128 -1 N ARG B 126 O VAL B 319 SHEET 1 C 2 LEU A 199 VAL A 200 0 SHEET 2 C 2 TYR A 227 LEU A 228 -1 O TYR A 227 N VAL A 200 SHEET 1 D 3 GLU A 243 LYS A 246 0 SHEET 2 D 3 THR A 366 LYS A 369 1 O ARG A 367 N LEU A 245 SHEET 3 D 3 ASN A 376 PHE A 378 -1 O ARG A 377 N PHE A 368 SHEET 1 E 2 VAL A 407 VAL A 408 0 SHEET 2 E 2 VAL A 421 ILE A 422 -1 O ILE A 422 N VAL A 407 SHEET 1 F 2 LEU B 199 VAL B 200 0 SHEET 2 F 2 TYR B 227 LEU B 228 -1 O TYR B 227 N VAL B 200 SHEET 1 G 3 GLU B 243 LYS B 246 0 SHEET 2 G 3 THR B 366 LYS B 369 1 O ARG B 367 N LEU B 245 SHEET 3 G 3 ASN B 376 PHE B 378 -1 O ARG B 377 N PHE B 368 SHEET 1 H 2 VAL B 407 VAL B 408 0 SHEET 2 H 2 VAL B 421 ILE B 422 -1 O ILE B 422 N VAL B 407 LINK C MSE A 1 N ILE A 2 1555 1555 1.33 LINK C PHE A 181 N MSE A 182 1555 1555 1.33 LINK C MSE A 182 N LEU A 183 1555 1555 1.32 LINK C ARG A 363 N MSE A 364 1555 1555 1.32 LINK C MSE A 364 N ASN A 365 1555 1555 1.33 LINK C MSE B 1 N ILE B 2 1555 1555 1.33 LINK C PHE B 181 N MSE B 182 1555 1555 1.33 LINK C MSE B 182 N LEU B 183 1555 1555 1.33 LINK C ARG B 363 N MSE B 364 1555 1555 1.33 LINK C MSE B 364 N ASN B 365 1555 1555 1.33 CISPEP 1 LEU A 211 PRO A 212 0 0.71 CISPEP 2 LEU A 250 PRO A 251 0 -0.12 CISPEP 3 LEU B 211 PRO B 212 0 0.51 CISPEP 4 LEU B 250 PRO B 251 0 -0.20 SITE 1 AC1 19 THR A 231 GLU A 233 ARG A 262 GLU A 264 SITE 2 AC1 19 ILE A 276 ARG A 277 GLN A 278 PHE A 281 SITE 3 AC1 19 LYS A 283 GLU A 285 GLU A 349 ILE A 350 SITE 4 AC1 19 SER A 351 SER A 352 ASN A 383 GLY A 384 SITE 5 AC1 19 SER A 385 ALA A 388 ARG A 391 SITE 1 AC2 17 THR B 231 GLU B 233 ARG B 262 GLU B 264 SITE 2 AC2 17 ILE B 276 ARG B 277 GLN B 278 PHE B 281 SITE 3 AC2 17 LYS B 283 GLU B 285 GLU B 349 ILE B 350 SITE 4 AC2 17 SER B 352 ASN B 383 SER B 385 ALA B 388 SITE 5 AC2 17 ARG B 391 CRYST1 119.057 119.057 80.660 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008399 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008399 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012398 0.00000 HETATM 1 N MSE A 1 -27.219 42.099 6.099 1.00113.23 N HETATM 2 CA MSE A 1 -27.748 41.071 7.041 1.00113.56 C HETATM 3 C MSE A 1 -28.013 39.733 6.346 1.00112.21 C HETATM 4 O MSE A 1 -27.881 39.616 5.124 1.00111.98 O HETATM 5 CB MSE A 1 -29.044 41.569 7.689 1.00115.36 C HETATM 6 CG MSE A 1 -30.069 42.053 6.686 1.00118.22 C HETATM 7 SE MSE A 1 -31.854 42.142 7.387 1.00122.50 SE HETATM 8 CE MSE A 1 -32.508 40.426 6.770 1.00121.41 C