data_2DR8 # _entry.id 2DR8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DR8 pdb_00002dr8 10.2210/pdb2dr8/pdb NDB PR0215 ? ? RCSB RCSB025749 ? ? WWPDB D_1000025749 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-11-14 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 29 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 30 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 31 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DR8 _pdbx_database_status.recvd_initial_deposition_date 2006-06-08 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2DR5 . unspecified PDB 2DR7 . unspecified PDB 2DR9 . unspecified PDB 2DRA . unspecified PDB 2DRB . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tomita, K.' 1 'Ishitani, R.' 2 'Fukai, S.' 3 'Nureki, O.' 4 # _citation.id primary _citation.title 'Complete crystallographic analysis of the dynamics of CCA sequence addition' _citation.journal_abbrev Nature _citation.journal_volume 443 _citation.page_first 956 _citation.page_last 960 _citation.year 2006 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17051158 _citation.pdbx_database_id_DOI 10.1038/nature05204 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tomita, K.' 1 ? primary 'Ishitani, R.' 2 ? primary 'Fukai, S.' 3 ? primary 'Nureki, O.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'tRNA (33-MER)' 10599.321 1 ? ? ? ? 2 polymer man 'CCA-adding enzyme' 51469.137 1 '2.7.7.25, 2.7.7.21' ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 5 non-polymer syn "CYTIDINE-5'-TRIPHOSPHATE" 483.156 1 ? ? ? ? 6 water nat water 18.015 163 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'tRNA nucleotidyltransferase, tRNA adenylyl-/cytidylyl- transferase, tRNA CCA-pyrophosphorylase, tRNA-NT' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GGCCCGGGGCGGUUCGAUUCCGCCCUGGGCCAC GGCCCGGGGCGGUUCGAUUCCGCCCUGGGCCAC B ? 2 'polypeptide(L)' no no ;MKVEEILEKALELVIPDEEEVRKGREAEEELRRRLDELGVEYVFVGSYARNTWLKGSLEIDVFLLFPEEFSKEELRERGL EIGKAVLDSYEIRYAEHPYVHGVVKGVEVDVVPCYKLKEPKNIKSAVDRTPFHHKWLEGRIKGKENEVRLLKGFLKANGI YGAEYKVRGFSGYLCELLIVFYGSFLETVKNARRWTRRTVIDVAKGEVRKGEEFFVVDPVDEKRNVAANLSLDNLARFVH LCREFMEAPSLGFFKPKHPLEIEPERLRKIVEERGTAVFAVKFRKPDIVDDNLYPQLERASRKIFEFLERENFMPLRSAF KASEEFCYLLFECQIKEISRVFRRMGPQFEDERNVKKFLSRNRAFRPFIENGRWWAFEMRKFTTPEEGVRSYASTHWHTL GKNVGESIREYFEIISGEKLFKEPVTAELCEMMGVKD ; ;MKVEEILEKALELVIPDEEEVRKGREAEEELRRRLDELGVEYVFVGSYARNTWLKGSLEIDVFLLFPEEFSKEELRERGL EIGKAVLDSYEIRYAEHPYVHGVVKGVEVDVVPCYKLKEPKNIKSAVDRTPFHHKWLEGRIKGKENEVRLLKGFLKANGI YGAEYKVRGFSGYLCELLIVFYGSFLETVKNARRWTRRTVIDVAKGEVRKGEEFFVVDPVDEKRNVAANLSLDNLARFVH LCREFMEAPSLGFFKPKHPLEIEPERLRKIVEERGTAVFAVKFRKPDIVDDNLYPQLERASRKIFEFLERENFMPLRSAF KASEEFCYLLFECQIKEISRVFRRMGPQFEDERNVKKFLSRNRAFRPFIENGRWWAFEMRKFTTPEEGVRSYASTHWHTL GKNVGESIREYFEIISGEKLFKEPVTAELCEMMGVKD ; A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 'MAGNESIUM ION' MG 5 "CYTIDINE-5'-TRIPHOSPHATE" CTP 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 C n 1 4 C n 1 5 C n 1 6 G n 1 7 G n 1 8 G n 1 9 G n 1 10 C n 1 11 G n 1 12 G n 1 13 U n 1 14 U n 1 15 C n 1 16 G n 1 17 A n 1 18 U n 1 19 U n 1 20 C n 1 21 C n 1 22 G n 1 23 C n 1 24 C n 1 25 C n 1 26 U n 1 27 G n 1 28 G n 1 29 G n 1 30 C n 1 31 C n 1 32 A n 1 33 C n 2 1 MET n 2 2 LYS n 2 3 VAL n 2 4 GLU n 2 5 GLU n 2 6 ILE n 2 7 LEU n 2 8 GLU n 2 9 LYS n 2 10 ALA n 2 11 LEU n 2 12 GLU n 2 13 LEU n 2 14 VAL n 2 15 ILE n 2 16 PRO n 2 17 ASP n 2 18 GLU n 2 19 GLU n 2 20 GLU n 2 21 VAL n 2 22 ARG n 2 23 LYS n 2 24 GLY n 2 25 ARG n 2 26 GLU n 2 27 ALA n 2 28 GLU n 2 29 GLU n 2 30 GLU n 2 31 LEU n 2 32 ARG n 2 33 ARG n 2 34 ARG n 2 35 LEU n 2 36 ASP n 2 37 GLU n 2 38 LEU n 2 39 GLY n 2 40 VAL n 2 41 GLU n 2 42 TYR n 2 43 VAL n 2 44 PHE n 2 45 VAL n 2 46 GLY n 2 47 SER n 2 48 TYR n 2 49 ALA n 2 50 ARG n 2 51 ASN n 2 52 THR n 2 53 TRP n 2 54 LEU n 2 55 LYS n 2 56 GLY n 2 57 SER n 2 58 LEU n 2 59 GLU n 2 60 ILE n 2 61 ASP n 2 62 VAL n 2 63 PHE n 2 64 LEU n 2 65 LEU n 2 66 PHE n 2 67 PRO n 2 68 GLU n 2 69 GLU n 2 70 PHE n 2 71 SER n 2 72 LYS n 2 73 GLU n 2 74 GLU n 2 75 LEU n 2 76 ARG n 2 77 GLU n 2 78 ARG n 2 79 GLY n 2 80 LEU n 2 81 GLU n 2 82 ILE n 2 83 GLY n 2 84 LYS n 2 85 ALA n 2 86 VAL n 2 87 LEU n 2 88 ASP n 2 89 SER n 2 90 TYR n 2 91 GLU n 2 92 ILE n 2 93 ARG n 2 94 TYR n 2 95 ALA n 2 96 GLU n 2 97 HIS n 2 98 PRO n 2 99 TYR n 2 100 VAL n 2 101 HIS n 2 102 GLY n 2 103 VAL n 2 104 VAL n 2 105 LYS n 2 106 GLY n 2 107 VAL n 2 108 GLU n 2 109 VAL n 2 110 ASP n 2 111 VAL n 2 112 VAL n 2 113 PRO n 2 114 CYS n 2 115 TYR n 2 116 LYS n 2 117 LEU n 2 118 LYS n 2 119 GLU n 2 120 PRO n 2 121 LYS n 2 122 ASN n 2 123 ILE n 2 124 LYS n 2 125 SER n 2 126 ALA n 2 127 VAL n 2 128 ASP n 2 129 ARG n 2 130 THR n 2 131 PRO n 2 132 PHE n 2 133 HIS n 2 134 HIS n 2 135 LYS n 2 136 TRP n 2 137 LEU n 2 138 GLU n 2 139 GLY n 2 140 ARG n 2 141 ILE n 2 142 LYS n 2 143 GLY n 2 144 LYS n 2 145 GLU n 2 146 ASN n 2 147 GLU n 2 148 VAL n 2 149 ARG n 2 150 LEU n 2 151 LEU n 2 152 LYS n 2 153 GLY n 2 154 PHE n 2 155 LEU n 2 156 LYS n 2 157 ALA n 2 158 ASN n 2 159 GLY n 2 160 ILE n 2 161 TYR n 2 162 GLY n 2 163 ALA n 2 164 GLU n 2 165 TYR n 2 166 LYS n 2 167 VAL n 2 168 ARG n 2 169 GLY n 2 170 PHE n 2 171 SER n 2 172 GLY n 2 173 TYR n 2 174 LEU n 2 175 CYS n 2 176 GLU n 2 177 LEU n 2 178 LEU n 2 179 ILE n 2 180 VAL n 2 181 PHE n 2 182 TYR n 2 183 GLY n 2 184 SER n 2 185 PHE n 2 186 LEU n 2 187 GLU n 2 188 THR n 2 189 VAL n 2 190 LYS n 2 191 ASN n 2 192 ALA n 2 193 ARG n 2 194 ARG n 2 195 TRP n 2 196 THR n 2 197 ARG n 2 198 ARG n 2 199 THR n 2 200 VAL n 2 201 ILE n 2 202 ASP n 2 203 VAL n 2 204 ALA n 2 205 LYS n 2 206 GLY n 2 207 GLU n 2 208 VAL n 2 209 ARG n 2 210 LYS n 2 211 GLY n 2 212 GLU n 2 213 GLU n 2 214 PHE n 2 215 PHE n 2 216 VAL n 2 217 VAL n 2 218 ASP n 2 219 PRO n 2 220 VAL n 2 221 ASP n 2 222 GLU n 2 223 LYS n 2 224 ARG n 2 225 ASN n 2 226 VAL n 2 227 ALA n 2 228 ALA n 2 229 ASN n 2 230 LEU n 2 231 SER n 2 232 LEU n 2 233 ASP n 2 234 ASN n 2 235 LEU n 2 236 ALA n 2 237 ARG n 2 238 PHE n 2 239 VAL n 2 240 HIS n 2 241 LEU n 2 242 CYS n 2 243 ARG n 2 244 GLU n 2 245 PHE n 2 246 MET n 2 247 GLU n 2 248 ALA n 2 249 PRO n 2 250 SER n 2 251 LEU n 2 252 GLY n 2 253 PHE n 2 254 PHE n 2 255 LYS n 2 256 PRO n 2 257 LYS n 2 258 HIS n 2 259 PRO n 2 260 LEU n 2 261 GLU n 2 262 ILE n 2 263 GLU n 2 264 PRO n 2 265 GLU n 2 266 ARG n 2 267 LEU n 2 268 ARG n 2 269 LYS n 2 270 ILE n 2 271 VAL n 2 272 GLU n 2 273 GLU n 2 274 ARG n 2 275 GLY n 2 276 THR n 2 277 ALA n 2 278 VAL n 2 279 PHE n 2 280 ALA n 2 281 VAL n 2 282 LYS n 2 283 PHE n 2 284 ARG n 2 285 LYS n 2 286 PRO n 2 287 ASP n 2 288 ILE n 2 289 VAL n 2 290 ASP n 2 291 ASP n 2 292 ASN n 2 293 LEU n 2 294 TYR n 2 295 PRO n 2 296 GLN n 2 297 LEU n 2 298 GLU n 2 299 ARG n 2 300 ALA n 2 301 SER n 2 302 ARG n 2 303 LYS n 2 304 ILE n 2 305 PHE n 2 306 GLU n 2 307 PHE n 2 308 LEU n 2 309 GLU n 2 310 ARG n 2 311 GLU n 2 312 ASN n 2 313 PHE n 2 314 MET n 2 315 PRO n 2 316 LEU n 2 317 ARG n 2 318 SER n 2 319 ALA n 2 320 PHE n 2 321 LYS n 2 322 ALA n 2 323 SER n 2 324 GLU n 2 325 GLU n 2 326 PHE n 2 327 CYS n 2 328 TYR n 2 329 LEU n 2 330 LEU n 2 331 PHE n 2 332 GLU n 2 333 CYS n 2 334 GLN n 2 335 ILE n 2 336 LYS n 2 337 GLU n 2 338 ILE n 2 339 SER n 2 340 ARG n 2 341 VAL n 2 342 PHE n 2 343 ARG n 2 344 ARG n 2 345 MET n 2 346 GLY n 2 347 PRO n 2 348 GLN n 2 349 PHE n 2 350 GLU n 2 351 ASP n 2 352 GLU n 2 353 ARG n 2 354 ASN n 2 355 VAL n 2 356 LYS n 2 357 LYS n 2 358 PHE n 2 359 LEU n 2 360 SER n 2 361 ARG n 2 362 ASN n 2 363 ARG n 2 364 ALA n 2 365 PHE n 2 366 ARG n 2 367 PRO n 2 368 PHE n 2 369 ILE n 2 370 GLU n 2 371 ASN n 2 372 GLY n 2 373 ARG n 2 374 TRP n 2 375 TRP n 2 376 ALA n 2 377 PHE n 2 378 GLU n 2 379 MET n 2 380 ARG n 2 381 LYS n 2 382 PHE n 2 383 THR n 2 384 THR n 2 385 PRO n 2 386 GLU n 2 387 GLU n 2 388 GLY n 2 389 VAL n 2 390 ARG n 2 391 SER n 2 392 TYR n 2 393 ALA n 2 394 SER n 2 395 THR n 2 396 HIS n 2 397 TRP n 2 398 HIS n 2 399 THR n 2 400 LEU n 2 401 GLY n 2 402 LYS n 2 403 ASN n 2 404 VAL n 2 405 GLY n 2 406 GLU n 2 407 SER n 2 408 ILE n 2 409 ARG n 2 410 GLU n 2 411 TYR n 2 412 PHE n 2 413 GLU n 2 414 ILE n 2 415 ILE n 2 416 SER n 2 417 GLY n 2 418 GLU n 2 419 LYS n 2 420 LEU n 2 421 PHE n 2 422 LYS n 2 423 GLU n 2 424 PRO n 2 425 VAL n 2 426 THR n 2 427 ALA n 2 428 GLU n 2 429 LEU n 2 430 CYS n 2 431 GLU n 2 432 MET n 2 433 MET n 2 434 GLY n 2 435 VAL n 2 436 LYS n 2 437 ASP n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Archaeoglobus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Archaeoglobus fulgidus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2234 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CTP non-polymer . "CYTIDINE-5'-TRIPHOSPHATE" ? 'C9 H16 N3 O14 P3' 483.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G GUA B . n A 1 2 G 2 2 2 G GUA B . n A 1 3 C 3 3 3 C CYT B . n A 1 4 C 4 4 4 C CYT B . n A 1 5 C 5 5 5 C CYT B . n A 1 6 G 6 6 6 G GUA B . n A 1 7 G 7 7 7 G GUA B . n A 1 8 G 8 8 8 G GUA B . n A 1 9 G 9 9 9 G GUA B . n A 1 10 C 10 10 10 C CYT B . n A 1 11 G 11 11 11 G GUA B . n A 1 12 G 12 12 12 G GUA B . n A 1 13 U 13 13 13 U URI B . n A 1 14 U 14 14 14 U URI B . n A 1 15 C 15 15 15 C CYT B . n A 1 16 G 16 16 16 G GUA B . n A 1 17 A 17 17 17 A ADE B . n A 1 18 U 18 18 18 U URI B . n A 1 19 U 19 19 19 U URI B . n A 1 20 C 20 20 20 C CYT B . n A 1 21 C 21 21 21 C CYT B . n A 1 22 G 22 22 22 G GUA B . n A 1 23 C 23 23 23 C CYT B . n A 1 24 C 24 24 24 C CYT B . n A 1 25 C 25 25 25 C CYT B . n A 1 26 U 26 26 26 U URI B . n A 1 27 G 27 27 27 G GUA B . n A 1 28 G 28 28 28 G GUA B . n A 1 29 G 29 29 29 G GUA B . n A 1 30 C 30 30 30 C CYT B . n A 1 31 C 31 31 31 C CYT B . n A 1 32 A 32 32 32 A ADE B . n A 1 33 C 33 33 33 C CYT B . n B 2 1 MET 1 1 1 MET MET A . n B 2 2 LYS 2 2 2 LYS LYS A . n B 2 3 VAL 3 3 3 VAL VAL A . n B 2 4 GLU 4 4 4 GLU GLU A . n B 2 5 GLU 5 5 5 GLU GLU A . n B 2 6 ILE 6 6 6 ILE ILE A . n B 2 7 LEU 7 7 7 LEU LEU A . n B 2 8 GLU 8 8 8 GLU GLU A . n B 2 9 LYS 9 9 9 LYS LYS A . n B 2 10 ALA 10 10 10 ALA ALA A . n B 2 11 LEU 11 11 11 LEU LEU A . n B 2 12 GLU 12 12 12 GLU GLU A . n B 2 13 LEU 13 13 13 LEU LEU A . n B 2 14 VAL 14 14 14 VAL VAL A . n B 2 15 ILE 15 15 15 ILE ILE A . n B 2 16 PRO 16 16 16 PRO PRO A . n B 2 17 ASP 17 17 17 ASP ASP A . n B 2 18 GLU 18 18 18 GLU GLU A . n B 2 19 GLU 19 19 19 GLU GLU A . n B 2 20 GLU 20 20 20 GLU GLU A . n B 2 21 VAL 21 21 21 VAL VAL A . n B 2 22 ARG 22 22 22 ARG ARG A . n B 2 23 LYS 23 23 23 LYS LYS A . n B 2 24 GLY 24 24 24 GLY GLY A . n B 2 25 ARG 25 25 25 ARG ARG A . n B 2 26 GLU 26 26 26 GLU GLU A . n B 2 27 ALA 27 27 27 ALA ALA A . n B 2 28 GLU 28 28 28 GLU GLU A . n B 2 29 GLU 29 29 29 GLU GLU A . n B 2 30 GLU 30 30 30 GLU GLU A . n B 2 31 LEU 31 31 31 LEU LEU A . n B 2 32 ARG 32 32 32 ARG ARG A . n B 2 33 ARG 33 33 33 ARG ARG A . n B 2 34 ARG 34 34 34 ARG ARG A . n B 2 35 LEU 35 35 35 LEU LEU A . n B 2 36 ASP 36 36 36 ASP ASP A . n B 2 37 GLU 37 37 37 GLU GLU A . n B 2 38 LEU 38 38 38 LEU LEU A . n B 2 39 GLY 39 39 39 GLY GLY A . n B 2 40 VAL 40 40 40 VAL VAL A . n B 2 41 GLU 41 41 41 GLU GLU A . n B 2 42 TYR 42 42 42 TYR TYR A . n B 2 43 VAL 43 43 43 VAL VAL A . n B 2 44 PHE 44 44 44 PHE PHE A . n B 2 45 VAL 45 45 45 VAL VAL A . n B 2 46 GLY 46 46 46 GLY GLY A . n B 2 47 SER 47 47 47 SER SER A . n B 2 48 TYR 48 48 48 TYR TYR A . n B 2 49 ALA 49 49 49 ALA ALA A . n B 2 50 ARG 50 50 50 ARG ARG A . n B 2 51 ASN 51 51 51 ASN ASN A . n B 2 52 THR 52 52 52 THR THR A . n B 2 53 TRP 53 53 53 TRP TRP A . n B 2 54 LEU 54 54 54 LEU LEU A . n B 2 55 LYS 55 55 55 LYS LYS A . n B 2 56 GLY 56 56 56 GLY GLY A . n B 2 57 SER 57 57 57 SER SER A . n B 2 58 LEU 58 58 58 LEU LEU A . n B 2 59 GLU 59 59 59 GLU GLU A . n B 2 60 ILE 60 60 60 ILE ILE A . n B 2 61 ASP 61 61 61 ASP ASP A . n B 2 62 VAL 62 62 62 VAL VAL A . n B 2 63 PHE 63 63 63 PHE PHE A . n B 2 64 LEU 64 64 64 LEU LEU A . n B 2 65 LEU 65 65 65 LEU LEU A . n B 2 66 PHE 66 66 66 PHE PHE A . n B 2 67 PRO 67 67 67 PRO PRO A . n B 2 68 GLU 68 68 68 GLU GLU A . n B 2 69 GLU 69 69 69 GLU GLU A . n B 2 70 PHE 70 70 70 PHE PHE A . n B 2 71 SER 71 71 71 SER SER A . n B 2 72 LYS 72 72 72 LYS LYS A . n B 2 73 GLU 73 73 73 GLU GLU A . n B 2 74 GLU 74 74 74 GLU GLU A . n B 2 75 LEU 75 75 75 LEU LEU A . n B 2 76 ARG 76 76 76 ARG ARG A . n B 2 77 GLU 77 77 77 GLU GLU A . n B 2 78 ARG 78 78 78 ARG ARG A . n B 2 79 GLY 79 79 79 GLY GLY A . n B 2 80 LEU 80 80 80 LEU LEU A . n B 2 81 GLU 81 81 81 GLU GLU A . n B 2 82 ILE 82 82 82 ILE ILE A . n B 2 83 GLY 83 83 83 GLY GLY A . n B 2 84 LYS 84 84 84 LYS LYS A . n B 2 85 ALA 85 85 85 ALA ALA A . n B 2 86 VAL 86 86 86 VAL VAL A . n B 2 87 LEU 87 87 87 LEU LEU A . n B 2 88 ASP 88 88 88 ASP ASP A . n B 2 89 SER 89 89 89 SER SER A . n B 2 90 TYR 90 90 90 TYR TYR A . n B 2 91 GLU 91 91 91 GLU GLU A . n B 2 92 ILE 92 92 92 ILE ILE A . n B 2 93 ARG 93 93 93 ARG ARG A . n B 2 94 TYR 94 94 94 TYR TYR A . n B 2 95 ALA 95 95 95 ALA ALA A . n B 2 96 GLU 96 96 96 GLU GLU A . n B 2 97 HIS 97 97 97 HIS HIS A . n B 2 98 PRO 98 98 98 PRO PRO A . n B 2 99 TYR 99 99 99 TYR TYR A . n B 2 100 VAL 100 100 100 VAL VAL A . n B 2 101 HIS 101 101 101 HIS HIS A . n B 2 102 GLY 102 102 102 GLY GLY A . n B 2 103 VAL 103 103 103 VAL VAL A . n B 2 104 VAL 104 104 104 VAL VAL A . n B 2 105 LYS 105 105 105 LYS LYS A . n B 2 106 GLY 106 106 106 GLY GLY A . n B 2 107 VAL 107 107 107 VAL VAL A . n B 2 108 GLU 108 108 108 GLU GLU A . n B 2 109 VAL 109 109 109 VAL VAL A . n B 2 110 ASP 110 110 110 ASP ASP A . n B 2 111 VAL 111 111 111 VAL VAL A . n B 2 112 VAL 112 112 112 VAL VAL A . n B 2 113 PRO 113 113 113 PRO PRO A . n B 2 114 CYS 114 114 114 CYS CYS A . n B 2 115 TYR 115 115 115 TYR TYR A . n B 2 116 LYS 116 116 116 LYS LYS A . n B 2 117 LEU 117 117 117 LEU LEU A . n B 2 118 LYS 118 118 118 LYS LYS A . n B 2 119 GLU 119 119 119 GLU GLU A . n B 2 120 PRO 120 120 120 PRO PRO A . n B 2 121 LYS 121 121 121 LYS LYS A . n B 2 122 ASN 122 122 122 ASN ASN A . n B 2 123 ILE 123 123 123 ILE ILE A . n B 2 124 LYS 124 124 124 LYS LYS A . n B 2 125 SER 125 125 125 SER SER A . n B 2 126 ALA 126 126 126 ALA ALA A . n B 2 127 VAL 127 127 127 VAL VAL A . n B 2 128 ASP 128 128 128 ASP ASP A . n B 2 129 ARG 129 129 129 ARG ARG A . n B 2 130 THR 130 130 130 THR THR A . n B 2 131 PRO 131 131 131 PRO PRO A . n B 2 132 PHE 132 132 132 PHE PHE A . n B 2 133 HIS 133 133 133 HIS HIS A . n B 2 134 HIS 134 134 134 HIS HIS A . n B 2 135 LYS 135 135 135 LYS LYS A . n B 2 136 TRP 136 136 136 TRP TRP A . n B 2 137 LEU 137 137 137 LEU LEU A . n B 2 138 GLU 138 138 138 GLU GLU A . n B 2 139 GLY 139 139 139 GLY GLY A . n B 2 140 ARG 140 140 140 ARG ARG A . n B 2 141 ILE 141 141 141 ILE ILE A . n B 2 142 LYS 142 142 142 LYS LYS A . n B 2 143 GLY 143 143 143 GLY GLY A . n B 2 144 LYS 144 144 144 LYS LYS A . n B 2 145 GLU 145 145 145 GLU GLU A . n B 2 146 ASN 146 146 146 ASN ASN A . n B 2 147 GLU 147 147 147 GLU GLU A . n B 2 148 VAL 148 148 148 VAL VAL A . n B 2 149 ARG 149 149 149 ARG ARG A . n B 2 150 LEU 150 150 150 LEU LEU A . n B 2 151 LEU 151 151 151 LEU LEU A . n B 2 152 LYS 152 152 152 LYS LYS A . n B 2 153 GLY 153 153 153 GLY GLY A . n B 2 154 PHE 154 154 154 PHE PHE A . n B 2 155 LEU 155 155 155 LEU LEU A . n B 2 156 LYS 156 156 156 LYS LYS A . n B 2 157 ALA 157 157 157 ALA ALA A . n B 2 158 ASN 158 158 158 ASN ASN A . n B 2 159 GLY 159 159 159 GLY GLY A . n B 2 160 ILE 160 160 160 ILE ILE A . n B 2 161 TYR 161 161 161 TYR TYR A . n B 2 162 GLY 162 162 162 GLY GLY A . n B 2 163 ALA 163 163 163 ALA ALA A . n B 2 164 GLU 164 164 164 GLU GLU A . n B 2 165 TYR 165 165 165 TYR TYR A . n B 2 166 LYS 166 166 166 LYS LYS A . n B 2 167 VAL 167 167 167 VAL VAL A . n B 2 168 ARG 168 168 168 ARG ARG A . n B 2 169 GLY 169 169 169 GLY GLY A . n B 2 170 PHE 170 170 170 PHE PHE A . n B 2 171 SER 171 171 171 SER SER A . n B 2 172 GLY 172 172 172 GLY GLY A . n B 2 173 TYR 173 173 173 TYR TYR A . n B 2 174 LEU 174 174 174 LEU LEU A . n B 2 175 CYS 175 175 175 CYS CYS A . n B 2 176 GLU 176 176 176 GLU GLU A . n B 2 177 LEU 177 177 177 LEU LEU A . n B 2 178 LEU 178 178 178 LEU LEU A . n B 2 179 ILE 179 179 179 ILE ILE A . n B 2 180 VAL 180 180 180 VAL VAL A . n B 2 181 PHE 181 181 181 PHE PHE A . n B 2 182 TYR 182 182 182 TYR TYR A . n B 2 183 GLY 183 183 183 GLY GLY A . n B 2 184 SER 184 184 184 SER SER A . n B 2 185 PHE 185 185 185 PHE PHE A . n B 2 186 LEU 186 186 186 LEU LEU A . n B 2 187 GLU 187 187 187 GLU GLU A . n B 2 188 THR 188 188 188 THR THR A . n B 2 189 VAL 189 189 189 VAL VAL A . n B 2 190 LYS 190 190 190 LYS LYS A . n B 2 191 ASN 191 191 191 ASN ASN A . n B 2 192 ALA 192 192 192 ALA ALA A . n B 2 193 ARG 193 193 193 ARG ARG A . n B 2 194 ARG 194 194 194 ARG ARG A . n B 2 195 TRP 195 195 195 TRP TRP A . n B 2 196 THR 196 196 196 THR THR A . n B 2 197 ARG 197 197 197 ARG ARG A . n B 2 198 ARG 198 198 198 ARG ARG A . n B 2 199 THR 199 199 199 THR THR A . n B 2 200 VAL 200 200 200 VAL VAL A . n B 2 201 ILE 201 201 201 ILE ILE A . n B 2 202 ASP 202 202 202 ASP ASP A . n B 2 203 VAL 203 203 203 VAL VAL A . n B 2 204 ALA 204 204 204 ALA ALA A . n B 2 205 LYS 205 205 205 LYS LYS A . n B 2 206 GLY 206 206 206 GLY GLY A . n B 2 207 GLU 207 207 207 GLU GLU A . n B 2 208 VAL 208 208 208 VAL VAL A . n B 2 209 ARG 209 209 209 ARG ARG A . n B 2 210 LYS 210 210 210 LYS LYS A . n B 2 211 GLY 211 211 211 GLY GLY A . n B 2 212 GLU 212 212 212 GLU GLU A . n B 2 213 GLU 213 213 213 GLU GLU A . n B 2 214 PHE 214 214 214 PHE PHE A . n B 2 215 PHE 215 215 215 PHE PHE A . n B 2 216 VAL 216 216 216 VAL VAL A . n B 2 217 VAL 217 217 217 VAL VAL A . n B 2 218 ASP 218 218 218 ASP ASP A . n B 2 219 PRO 219 219 219 PRO PRO A . n B 2 220 VAL 220 220 220 VAL VAL A . n B 2 221 ASP 221 221 221 ASP ASP A . n B 2 222 GLU 222 222 222 GLU GLU A . n B 2 223 LYS 223 223 223 LYS LYS A . n B 2 224 ARG 224 224 224 ARG ARG A . n B 2 225 ASN 225 225 225 ASN ASN A . n B 2 226 VAL 226 226 226 VAL VAL A . n B 2 227 ALA 227 227 227 ALA ALA A . n B 2 228 ALA 228 228 228 ALA ALA A . n B 2 229 ASN 229 229 229 ASN ASN A . n B 2 230 LEU 230 230 230 LEU LEU A . n B 2 231 SER 231 231 231 SER SER A . n B 2 232 LEU 232 232 232 LEU LEU A . n B 2 233 ASP 233 233 233 ASP ASP A . n B 2 234 ASN 234 234 234 ASN ASN A . n B 2 235 LEU 235 235 235 LEU LEU A . n B 2 236 ALA 236 236 236 ALA ALA A . n B 2 237 ARG 237 237 237 ARG ARG A . n B 2 238 PHE 238 238 238 PHE PHE A . n B 2 239 VAL 239 239 239 VAL VAL A . n B 2 240 HIS 240 240 240 HIS HIS A . n B 2 241 LEU 241 241 241 LEU LEU A . n B 2 242 CYS 242 242 242 CYS CYS A . n B 2 243 ARG 243 243 243 ARG ARG A . n B 2 244 GLU 244 244 244 GLU GLU A . n B 2 245 PHE 245 245 245 PHE PHE A . n B 2 246 MET 246 246 246 MET MET A . n B 2 247 GLU 247 247 247 GLU GLU A . n B 2 248 ALA 248 248 248 ALA ALA A . n B 2 249 PRO 249 249 249 PRO PRO A . n B 2 250 SER 250 250 250 SER SER A . n B 2 251 LEU 251 251 251 LEU LEU A . n B 2 252 GLY 252 252 252 GLY GLY A . n B 2 253 PHE 253 253 253 PHE PHE A . n B 2 254 PHE 254 254 254 PHE PHE A . n B 2 255 LYS 255 255 255 LYS LYS A . n B 2 256 PRO 256 256 256 PRO PRO A . n B 2 257 LYS 257 257 257 LYS LYS A . n B 2 258 HIS 258 258 258 HIS HIS A . n B 2 259 PRO 259 259 259 PRO PRO A . n B 2 260 LEU 260 260 260 LEU LEU A . n B 2 261 GLU 261 261 261 GLU GLU A . n B 2 262 ILE 262 262 262 ILE ILE A . n B 2 263 GLU 263 263 263 GLU GLU A . n B 2 264 PRO 264 264 264 PRO PRO A . n B 2 265 GLU 265 265 265 GLU GLU A . n B 2 266 ARG 266 266 266 ARG ARG A . n B 2 267 LEU 267 267 267 LEU LEU A . n B 2 268 ARG 268 268 268 ARG ARG A . n B 2 269 LYS 269 269 269 LYS LYS A . n B 2 270 ILE 270 270 270 ILE ILE A . n B 2 271 VAL 271 271 271 VAL VAL A . n B 2 272 GLU 272 272 272 GLU GLU A . n B 2 273 GLU 273 273 273 GLU GLU A . n B 2 274 ARG 274 274 274 ARG ARG A . n B 2 275 GLY 275 275 275 GLY GLY A . n B 2 276 THR 276 276 276 THR THR A . n B 2 277 ALA 277 277 277 ALA ALA A . n B 2 278 VAL 278 278 278 VAL VAL A . n B 2 279 PHE 279 279 279 PHE PHE A . n B 2 280 ALA 280 280 280 ALA ALA A . n B 2 281 VAL 281 281 281 VAL VAL A . n B 2 282 LYS 282 282 282 LYS LYS A . n B 2 283 PHE 283 283 283 PHE PHE A . n B 2 284 ARG 284 284 284 ARG ARG A . n B 2 285 LYS 285 285 285 LYS LYS A . n B 2 286 PRO 286 286 286 PRO PRO A . n B 2 287 ASP 287 287 287 ASP ASP A . n B 2 288 ILE 288 288 288 ILE ILE A . n B 2 289 VAL 289 289 289 VAL VAL A . n B 2 290 ASP 290 290 290 ASP ASP A . n B 2 291 ASP 291 291 291 ASP ASP A . n B 2 292 ASN 292 292 292 ASN ASN A . n B 2 293 LEU 293 293 293 LEU LEU A . n B 2 294 TYR 294 294 294 TYR TYR A . n B 2 295 PRO 295 295 295 PRO PRO A . n B 2 296 GLN 296 296 296 GLN GLN A . n B 2 297 LEU 297 297 297 LEU LEU A . n B 2 298 GLU 298 298 298 GLU GLU A . n B 2 299 ARG 299 299 299 ARG ARG A . n B 2 300 ALA 300 300 300 ALA ALA A . n B 2 301 SER 301 301 301 SER SER A . n B 2 302 ARG 302 302 302 ARG ARG A . n B 2 303 LYS 303 303 303 LYS LYS A . n B 2 304 ILE 304 304 304 ILE ILE A . n B 2 305 PHE 305 305 305 PHE PHE A . n B 2 306 GLU 306 306 306 GLU GLU A . n B 2 307 PHE 307 307 307 PHE PHE A . n B 2 308 LEU 308 308 308 LEU LEU A . n B 2 309 GLU 309 309 309 GLU GLU A . n B 2 310 ARG 310 310 310 ARG ARG A . n B 2 311 GLU 311 311 311 GLU GLU A . n B 2 312 ASN 312 312 312 ASN ASN A . n B 2 313 PHE 313 313 313 PHE PHE A . n B 2 314 MET 314 314 314 MET MET A . n B 2 315 PRO 315 315 315 PRO PRO A . n B 2 316 LEU 316 316 316 LEU LEU A . n B 2 317 ARG 317 317 317 ARG ARG A . n B 2 318 SER 318 318 318 SER SER A . n B 2 319 ALA 319 319 319 ALA ALA A . n B 2 320 PHE 320 320 320 PHE PHE A . n B 2 321 LYS 321 321 321 LYS LYS A . n B 2 322 ALA 322 322 322 ALA ALA A . n B 2 323 SER 323 323 323 SER SER A . n B 2 324 GLU 324 324 324 GLU GLU A . n B 2 325 GLU 325 325 325 GLU GLU A . n B 2 326 PHE 326 326 326 PHE PHE A . n B 2 327 CYS 327 327 327 CYS CYS A . n B 2 328 TYR 328 328 328 TYR TYR A . n B 2 329 LEU 329 329 329 LEU LEU A . n B 2 330 LEU 330 330 330 LEU LEU A . n B 2 331 PHE 331 331 331 PHE PHE A . n B 2 332 GLU 332 332 332 GLU GLU A . n B 2 333 CYS 333 333 333 CYS CYS A . n B 2 334 GLN 334 334 334 GLN GLN A . n B 2 335 ILE 335 335 335 ILE ILE A . n B 2 336 LYS 336 336 336 LYS LYS A . n B 2 337 GLU 337 337 337 GLU GLU A . n B 2 338 ILE 338 338 338 ILE ILE A . n B 2 339 SER 339 339 339 SER SER A . n B 2 340 ARG 340 340 340 ARG ARG A . n B 2 341 VAL 341 341 341 VAL VAL A . n B 2 342 PHE 342 342 342 PHE PHE A . n B 2 343 ARG 343 343 343 ARG ARG A . n B 2 344 ARG 344 344 344 ARG ARG A . n B 2 345 MET 345 345 345 MET MET A . n B 2 346 GLY 346 346 346 GLY GLY A . n B 2 347 PRO 347 347 347 PRO PRO A . n B 2 348 GLN 348 348 348 GLN GLN A . n B 2 349 PHE 349 349 349 PHE PHE A . n B 2 350 GLU 350 350 350 GLU GLU A . n B 2 351 ASP 351 351 351 ASP ASP A . n B 2 352 GLU 352 352 352 GLU GLU A . n B 2 353 ARG 353 353 353 ARG ARG A . n B 2 354 ASN 354 354 354 ASN ASN A . n B 2 355 VAL 355 355 355 VAL VAL A . n B 2 356 LYS 356 356 356 LYS LYS A . n B 2 357 LYS 357 357 357 LYS LYS A . n B 2 358 PHE 358 358 358 PHE PHE A . n B 2 359 LEU 359 359 359 LEU LEU A . n B 2 360 SER 360 360 360 SER SER A . n B 2 361 ARG 361 361 361 ARG ARG A . n B 2 362 ASN 362 362 362 ASN ASN A . n B 2 363 ARG 363 363 363 ARG ARG A . n B 2 364 ALA 364 364 364 ALA ALA A . n B 2 365 PHE 365 365 365 PHE PHE A . n B 2 366 ARG 366 366 366 ARG ARG A . n B 2 367 PRO 367 367 367 PRO PRO A . n B 2 368 PHE 368 368 368 PHE PHE A . n B 2 369 ILE 369 369 369 ILE ILE A . n B 2 370 GLU 370 370 370 GLU GLU A . n B 2 371 ASN 371 371 371 ASN ASN A . n B 2 372 GLY 372 372 372 GLY GLY A . n B 2 373 ARG 373 373 373 ARG ARG A . n B 2 374 TRP 374 374 374 TRP TRP A . n B 2 375 TRP 375 375 375 TRP TRP A . n B 2 376 ALA 376 376 376 ALA ALA A . n B 2 377 PHE 377 377 377 PHE PHE A . n B 2 378 GLU 378 378 378 GLU GLU A . n B 2 379 MET 379 379 379 MET MET A . n B 2 380 ARG 380 380 380 ARG ARG A . n B 2 381 LYS 381 381 381 LYS LYS A . n B 2 382 PHE 382 382 382 PHE PHE A . n B 2 383 THR 383 383 383 THR THR A . n B 2 384 THR 384 384 384 THR THR A . n B 2 385 PRO 385 385 385 PRO PRO A . n B 2 386 GLU 386 386 386 GLU GLU A . n B 2 387 GLU 387 387 387 GLU GLU A . n B 2 388 GLY 388 388 388 GLY GLY A . n B 2 389 VAL 389 389 389 VAL VAL A . n B 2 390 ARG 390 390 390 ARG ARG A . n B 2 391 SER 391 391 391 SER SER A . n B 2 392 TYR 392 392 392 TYR TYR A . n B 2 393 ALA 393 393 393 ALA ALA A . n B 2 394 SER 394 394 394 SER SER A . n B 2 395 THR 395 395 395 THR THR A . n B 2 396 HIS 396 396 396 HIS HIS A . n B 2 397 TRP 397 397 397 TRP TRP A . n B 2 398 HIS 398 398 398 HIS HIS A . n B 2 399 THR 399 399 399 THR THR A . n B 2 400 LEU 400 400 400 LEU LEU A . n B 2 401 GLY 401 401 401 GLY GLY A . n B 2 402 LYS 402 402 402 LYS LYS A . n B 2 403 ASN 403 403 403 ASN ASN A . n B 2 404 VAL 404 404 404 VAL VAL A . n B 2 405 GLY 405 405 405 GLY GLY A . n B 2 406 GLU 406 406 406 GLU GLU A . n B 2 407 SER 407 407 407 SER SER A . n B 2 408 ILE 408 408 408 ILE ILE A . n B 2 409 ARG 409 409 409 ARG ARG A . n B 2 410 GLU 410 410 410 GLU GLU A . n B 2 411 TYR 411 411 411 TYR TYR A . n B 2 412 PHE 412 412 412 PHE PHE A . n B 2 413 GLU 413 413 413 GLU GLU A . n B 2 414 ILE 414 414 414 ILE ILE A . n B 2 415 ILE 415 415 415 ILE ILE A . n B 2 416 SER 416 416 416 SER SER A . n B 2 417 GLY 417 417 417 GLY GLY A . n B 2 418 GLU 418 418 418 GLU GLU A . n B 2 419 LYS 419 419 419 LYS LYS A . n B 2 420 LEU 420 420 420 LEU LEU A . n B 2 421 PHE 421 421 421 PHE PHE A . n B 2 422 LYS 422 422 422 LYS LYS A . n B 2 423 GLU 423 423 423 GLU GLU A . n B 2 424 PRO 424 424 424 PRO PRO A . n B 2 425 VAL 425 425 425 VAL VAL A . n B 2 426 THR 426 426 426 THR THR A . n B 2 427 ALA 427 427 427 ALA ALA A . n B 2 428 GLU 428 428 428 GLU GLU A . n B 2 429 LEU 429 429 429 LEU LEU A . n B 2 430 CYS 430 430 430 CYS CYS A . n B 2 431 GLU 431 431 431 GLU GLU A . n B 2 432 MET 432 432 432 MET MET A . n B 2 433 MET 433 433 433 MET MET A . n B 2 434 GLY 434 434 434 GLY GLY A . n B 2 435 VAL 435 435 435 VAL VAL A . n B 2 436 LYS 436 436 436 LYS LYS A . n B 2 437 ASP 437 437 437 ASP ASP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 1 502 502 SO4 SO4 A . D 4 MG 1 503 503 MG MG2 A . E 5 CTP 1 501 501 CTP CTP A . F 6 HOH 1 34 5 HOH TIP B . F 6 HOH 2 35 11 HOH TIP B . F 6 HOH 3 36 31 HOH TIP B . F 6 HOH 4 37 40 HOH TIP B . F 6 HOH 5 38 42 HOH TIP B . F 6 HOH 6 39 43 HOH TIP B . F 6 HOH 7 40 46 HOH TIP B . F 6 HOH 8 41 47 HOH TIP B . F 6 HOH 9 42 50 HOH TIP B . F 6 HOH 10 43 59 HOH TIP B . F 6 HOH 11 44 60 HOH TIP B . F 6 HOH 12 45 69 HOH TIP B . F 6 HOH 13 46 70 HOH TIP B . F 6 HOH 14 47 75 HOH TIP B . F 6 HOH 15 48 80 HOH TIP B . F 6 HOH 16 49 81 HOH TIP B . F 6 HOH 17 50 82 HOH TIP B . F 6 HOH 18 51 89 HOH TIP B . F 6 HOH 19 52 93 HOH TIP B . F 6 HOH 20 53 105 HOH TIP B . F 6 HOH 21 54 108 HOH TIP B . F 6 HOH 22 55 112 HOH TIP B . F 6 HOH 23 56 129 HOH TIP B . F 6 HOH 24 57 132 HOH TIP B . F 6 HOH 25 58 140 HOH TIP B . F 6 HOH 26 59 146 HOH TIP B . F 6 HOH 27 60 147 HOH TIP B . F 6 HOH 28 61 148 HOH TIP B . F 6 HOH 29 62 150 HOH TIP B . F 6 HOH 30 63 157 HOH TIP B . F 6 HOH 31 64 158 HOH TIP B . F 6 HOH 32 65 159 HOH TIP B . F 6 HOH 33 66 160 HOH TIP B . G 6 HOH 1 504 1 HOH TIP A . G 6 HOH 2 505 2 HOH TIP A . G 6 HOH 3 506 3 HOH TIP A . G 6 HOH 4 507 4 HOH TIP A . G 6 HOH 5 508 6 HOH TIP A . G 6 HOH 6 509 7 HOH TIP A . G 6 HOH 7 510 8 HOH TIP A . G 6 HOH 8 511 9 HOH TIP A . G 6 HOH 9 512 10 HOH TIP A . G 6 HOH 10 513 12 HOH TIP A . G 6 HOH 11 514 13 HOH TIP A . G 6 HOH 12 515 14 HOH TIP A . G 6 HOH 13 516 15 HOH TIP A . G 6 HOH 14 517 16 HOH TIP A . G 6 HOH 15 518 17 HOH TIP A . G 6 HOH 16 519 18 HOH TIP A . G 6 HOH 17 520 19 HOH TIP A . G 6 HOH 18 521 20 HOH TIP A . G 6 HOH 19 522 21 HOH TIP A . G 6 HOH 20 523 22 HOH TIP A . G 6 HOH 21 524 23 HOH TIP A . G 6 HOH 22 525 24 HOH TIP A . G 6 HOH 23 526 25 HOH TIP A . G 6 HOH 24 527 26 HOH TIP A . G 6 HOH 25 528 27 HOH TIP A . G 6 HOH 26 529 28 HOH TIP A . G 6 HOH 27 530 29 HOH TIP A . G 6 HOH 28 531 30 HOH TIP A . G 6 HOH 29 532 32 HOH TIP A . G 6 HOH 30 533 33 HOH TIP A . G 6 HOH 31 534 34 HOH TIP A . G 6 HOH 32 535 35 HOH TIP A . G 6 HOH 33 536 36 HOH TIP A . G 6 HOH 34 537 37 HOH TIP A . G 6 HOH 35 538 38 HOH TIP A . G 6 HOH 36 539 39 HOH TIP A . G 6 HOH 37 540 41 HOH TIP A . G 6 HOH 38 541 44 HOH TIP A . G 6 HOH 39 542 45 HOH TIP A . G 6 HOH 40 543 48 HOH TIP A . G 6 HOH 41 544 49 HOH TIP A . G 6 HOH 42 545 51 HOH TIP A . G 6 HOH 43 546 52 HOH TIP A . G 6 HOH 44 547 53 HOH TIP A . G 6 HOH 45 548 54 HOH TIP A . G 6 HOH 46 549 55 HOH TIP A . G 6 HOH 47 550 56 HOH TIP A . G 6 HOH 48 551 57 HOH TIP A . G 6 HOH 49 552 58 HOH TIP A . G 6 HOH 50 553 61 HOH TIP A . G 6 HOH 51 554 62 HOH TIP A . G 6 HOH 52 555 63 HOH TIP A . G 6 HOH 53 556 64 HOH TIP A . G 6 HOH 54 557 65 HOH TIP A . G 6 HOH 55 558 66 HOH TIP A . G 6 HOH 56 559 67 HOH TIP A . G 6 HOH 57 560 68 HOH TIP A . G 6 HOH 58 561 71 HOH TIP A . G 6 HOH 59 562 72 HOH TIP A . G 6 HOH 60 563 73 HOH TIP A . G 6 HOH 61 564 74 HOH TIP A . G 6 HOH 62 565 76 HOH TIP A . G 6 HOH 63 566 77 HOH TIP A . G 6 HOH 64 567 78 HOH TIP A . G 6 HOH 65 568 79 HOH TIP A . G 6 HOH 66 569 83 HOH TIP A . G 6 HOH 67 570 84 HOH TIP A . G 6 HOH 68 571 85 HOH TIP A . G 6 HOH 69 572 86 HOH TIP A . G 6 HOH 70 573 87 HOH TIP A . G 6 HOH 71 574 88 HOH TIP A . G 6 HOH 72 575 90 HOH TIP A . G 6 HOH 73 576 91 HOH TIP A . G 6 HOH 74 577 92 HOH TIP A . G 6 HOH 75 578 94 HOH TIP A . G 6 HOH 76 579 95 HOH TIP A . G 6 HOH 77 580 96 HOH TIP A . G 6 HOH 78 581 97 HOH TIP A . G 6 HOH 79 582 98 HOH TIP A . G 6 HOH 80 583 99 HOH TIP A . G 6 HOH 81 584 100 HOH TIP A . G 6 HOH 82 585 101 HOH TIP A . G 6 HOH 83 586 102 HOH TIP A . G 6 HOH 84 587 103 HOH TIP A . G 6 HOH 85 588 104 HOH TIP A . G 6 HOH 86 589 106 HOH TIP A . G 6 HOH 87 590 107 HOH TIP A . G 6 HOH 88 591 109 HOH TIP A . G 6 HOH 89 592 110 HOH TIP A . G 6 HOH 90 593 111 HOH TIP A . G 6 HOH 91 594 113 HOH TIP A . G 6 HOH 92 595 114 HOH TIP A . G 6 HOH 93 596 115 HOH TIP A . G 6 HOH 94 597 116 HOH TIP A . G 6 HOH 95 598 117 HOH TIP A . G 6 HOH 96 599 118 HOH TIP A . G 6 HOH 97 600 119 HOH TIP A . G 6 HOH 98 601 120 HOH TIP A . G 6 HOH 99 602 121 HOH TIP A . G 6 HOH 100 603 122 HOH TIP A . G 6 HOH 101 604 123 HOH TIP A . G 6 HOH 102 605 124 HOH TIP A . G 6 HOH 103 606 125 HOH TIP A . G 6 HOH 104 607 126 HOH TIP A . G 6 HOH 105 608 127 HOH TIP A . G 6 HOH 106 609 128 HOH TIP A . G 6 HOH 107 610 130 HOH TIP A . G 6 HOH 108 611 131 HOH TIP A . G 6 HOH 109 612 133 HOH TIP A . G 6 HOH 110 613 134 HOH TIP A . G 6 HOH 111 614 135 HOH TIP A . G 6 HOH 112 615 136 HOH TIP A . G 6 HOH 113 616 137 HOH TIP A . G 6 HOH 114 617 138 HOH TIP A . G 6 HOH 115 618 139 HOH TIP A . G 6 HOH 116 619 141 HOH TIP A . G 6 HOH 117 620 142 HOH TIP A . G 6 HOH 118 621 143 HOH TIP A . G 6 HOH 119 622 144 HOH TIP A . G 6 HOH 120 623 145 HOH TIP A . G 6 HOH 121 624 149 HOH TIP A . G 6 HOH 122 625 151 HOH TIP A . G 6 HOH 123 626 152 HOH TIP A . G 6 HOH 124 627 153 HOH TIP A . G 6 HOH 125 628 154 HOH TIP A . G 6 HOH 126 629 155 HOH TIP A . G 6 HOH 127 630 156 HOH TIP A . G 6 HOH 128 631 161 HOH TIP A . G 6 HOH 129 632 162 HOH TIP A . G 6 HOH 130 633 163 HOH TIP A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 # _cell.entry_id 2DR8 _cell.length_a 58.029 _cell.length_b 58.029 _cell.length_c 429.507 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2DR8 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2DR8 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.91 _exptl_crystal.density_percent_sol 57.76 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 297 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '50mM HEPES, 20% PEG 3550, 0.2M Tri-lithium citrate, 80mM (NH4)2SO4, pH 7.5, VAPOR DIFFUSION, temperature 297K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 HEPES ? ? ? 1 2 1 'PEG 3550' ? ? ? 1 3 1 'Tri-lithium citrate' ? ? ? 1 4 1 'ammonium sulphate' ? ? ? 1 5 1 water ? ? ? 1 6 2 HEPES ? ? ? 1 7 2 'PEG 3550' ? ? ? 1 8 2 'Tri-lithium citrate' ? ? ? 1 9 2 'ammonium sulphate' ? ? ? 1 10 2 water ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2005-05-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 channel' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL41XU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1 # _reflns.entry_id 2DR8 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.5 _reflns.number_obs 25932 _reflns.number_all 25932 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 39.5 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.5 _reflns_shell.d_res_low 2.6 _reflns_shell.percent_possible_all 95.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2DR8 _refine.ls_number_reflns_obs 25932 _refine.ls_number_reflns_all 25932 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 3397906.69 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 9.98 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 98.0 _refine.ls_R_factor_obs 0.224 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.224 _refine.ls_R_factor_R_free 0.257 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 1253 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 47.3 _refine.aniso_B[1][1] 0.08 _refine.aniso_B[2][2] 0.08 _refine.aniso_B[3][3] -0.17 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.413693 _refine.solvent_model_param_bsol 46.2511 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2DR8 _refine_analyze.Luzzati_coordinate_error_obs 0.32 _refine_analyze.Luzzati_sigma_a_obs 0.32 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.38 _refine_analyze.Luzzati_sigma_a_free 0.42 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3630 _refine_hist.pdbx_number_atoms_nucleic_acid 704 _refine_hist.pdbx_number_atoms_ligand 35 _refine_hist.number_atoms_solvent 163 _refine_hist.number_atoms_total 4532 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 9.98 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 21.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.03 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.35 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.28 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.95 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.02 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.50 _refine_ls_shell.d_res_low 2.65 _refine_ls_shell.number_reflns_R_work 3934 _refine_ls_shell.R_factor_R_work 0.292 _refine_ls_shell.percent_reflns_obs 95.6 _refine_ls_shell.R_factor_R_free 0.324 _refine_ls_shell.R_factor_R_free_error 0.023 _refine_ls_shell.percent_reflns_R_free 4.6 _refine_ls_shell.number_reflns_R_free 191 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 dna-rna_rep.param dna-rna.top 'X-RAY DIFFRACTION' 3 water_rep.param water.top 'X-RAY DIFFRACTION' 4 ion.param ion.top 'X-RAY DIFFRACTION' 5 atp2.param atp2.top 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2DR8 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2DR8 _struct.title 'Complex structure of CCA-adding enzyme with tRNAminiDC and CTP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DR8 _struct_keywords.pdbx_keywords TRANSFERASE/RNA _struct_keywords.text 'protein-rna complex, TRANSFERASE-RNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP CCA_ARCFU O28126 2 1 ? ? 2 PDB 2DR8 2DR8 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2DR8 A 1 ? 437 ? O28126 1 ? 437 ? 1 437 2 2 2DR8 B 1 ? 33 ? 2DR8 1 ? 33 ? 1 33 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS B 2 ? ILE B 15 ? LYS A 2 ILE A 15 1 ? 14 HELX_P HELX_P2 2 ASP B 17 ? ASP B 36 ? ASP A 17 ASP A 36 1 ? 20 HELX_P HELX_P3 3 GLY B 46 ? ARG B 50 ? GLY A 46 ARG A 50 1 ? 5 HELX_P HELX_P4 4 SER B 71 ? LEU B 87 ? SER A 71 LEU A 87 1 ? 17 HELX_P HELX_P5 5 ARG B 129 ? GLY B 139 ? ARG A 129 GLY A 139 1 ? 11 HELX_P HELX_P6 6 LYS B 144 ? ASN B 158 ? LYS A 144 ASN A 158 1 ? 15 HELX_P HELX_P7 7 SER B 171 ? GLY B 183 ? SER A 171 GLY A 183 1 ? 13 HELX_P HELX_P8 8 SER B 184 ? ARG B 193 ? SER A 184 ARG A 193 1 ? 10 HELX_P HELX_P9 9 ALA B 204 ? GLY B 206 ? ALA A 204 GLY A 206 5 ? 3 HELX_P HELX_P10 10 SER B 231 ? ALA B 248 ? SER A 231 ALA A 248 1 ? 18 HELX_P HELX_P11 11 SER B 250 ? LYS B 255 ? SER A 250 LYS A 255 5 ? 6 HELX_P HELX_P12 12 GLU B 263 ? GLY B 275 ? GLU A 263 GLY A 275 1 ? 13 HELX_P HELX_P13 13 VAL B 289 ? GLU B 311 ? VAL A 289 GLU A 311 1 ? 23 HELX_P HELX_P14 14 ASP B 351 ? SER B 360 ? ASP A 351 SER A 360 1 ? 10 HELX_P HELX_P15 15 THR B 384 ? HIS B 396 ? THR A 384 HIS A 396 1 ? 13 HELX_P HELX_P16 16 TRP B 397 ? LEU B 400 ? TRP A 397 LEU A 400 5 ? 4 HELX_P HELX_P17 17 GLY B 401 ? TYR B 411 ? GLY A 401 TYR A 411 1 ? 11 HELX_P HELX_P18 18 GLY B 417 ? LYS B 422 ? GLY A 417 LYS A 422 1 ? 6 HELX_P HELX_P19 19 VAL B 425 ? GLY B 434 ? VAL A 425 GLY A 434 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? B GLU 59 O ? ? ? 1_555 D MG . MG ? ? A GLU 59 A MG 503 1_555 ? ? ? ? ? ? ? 3.067 ? ? metalc2 metalc ? ? B ASP 61 OD1 ? ? ? 1_555 D MG . MG ? ? A ASP 61 A MG 503 1_555 ? ? ? ? ? ? ? 2.435 ? ? metalc3 metalc ? ? E CTP . O1A ? ? ? 1_555 D MG . MG ? ? A CTP 501 A MG 503 1_555 ? ? ? ? ? ? ? 3.007 ? ? metalc4 metalc ? ? E CTP . O2B ? ? ? 1_555 D MG . MG ? ? A CTP 501 A MG 503 1_555 ? ? ? ? ? ? ? 2.782 ? ? metalc5 metalc ? ? E CTP . O3G ? ? ? 1_555 D MG . MG ? ? A CTP 501 A MG 503 1_555 ? ? ? ? ? ? ? 2.696 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 31 N3 ? ? B G 1 B C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 31 O2 ? ? B G 1 B C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 31 N4 ? ? B G 1 B C 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 30 N3 ? ? B G 2 B C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 30 O2 ? ? B G 2 B C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 30 N4 ? ? B G 2 B C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 29 N1 ? ? B C 3 B G 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 29 O6 ? ? B C 3 B G 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 29 N2 ? ? B C 3 B G 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 28 N1 ? ? B C 4 B G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 28 O6 ? ? B C 4 B G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 28 N2 ? ? B C 4 B G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 27 N1 ? ? B C 5 B G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 27 O6 ? ? B C 5 B G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 27 N2 ? ? B C 5 B G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 6 N1 ? ? ? 1_555 A U 26 O2 ? ? B G 6 B U 26 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog17 hydrog ? ? A G 7 N1 ? ? ? 1_555 A C 25 N3 ? ? B G 7 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 7 N2 ? ? ? 1_555 A C 25 O2 ? ? B G 7 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 7 O6 ? ? ? 1_555 A C 25 N4 ? ? B G 7 B C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 8 N1 ? ? ? 1_555 A C 24 N3 ? ? B G 8 B C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 24 O2 ? ? B G 8 B C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 8 O6 ? ? ? 1_555 A C 24 N4 ? ? B G 8 B C 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 9 N1 ? ? ? 1_555 A C 23 N3 ? ? B G 9 B C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 9 N2 ? ? ? 1_555 A C 23 O2 ? ? B G 9 B C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 9 O6 ? ? ? 1_555 A C 23 N4 ? ? B G 9 B C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 10 N3 ? ? ? 1_555 A G 22 N1 ? ? B C 10 B G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 10 N4 ? ? ? 1_555 A G 22 O6 ? ? B C 10 B G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 10 O2 ? ? ? 1_555 A G 22 N2 ? ? B C 10 B G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 11 N1 ? ? ? 1_555 A C 21 N3 ? ? B G 11 B C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 11 N2 ? ? ? 1_555 A C 21 O2 ? ? B G 11 B C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 11 O6 ? ? ? 1_555 A C 21 N4 ? ? B G 11 B C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 12 N1 ? ? ? 1_555 A C 20 N3 ? ? B G 12 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 12 N2 ? ? ? 1_555 A C 20 O2 ? ? B G 12 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 12 O6 ? ? ? 1_555 A C 20 N4 ? ? B G 12 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A U 13 N3 ? ? ? 1_555 A A 17 N7 ? ? B U 13 B A 17 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog36 hydrog ? ? A U 13 O2 ? ? ? 1_555 A A 17 N6 ? ? B U 13 B A 17 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? B GLU 59 ? A GLU 59 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 OD1 ? B ASP 61 ? A ASP 61 ? 1_555 82.3 ? 2 O ? B GLU 59 ? A GLU 59 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O1A ? E CTP . ? A CTP 501 ? 1_555 153.3 ? 3 OD1 ? B ASP 61 ? A ASP 61 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O1A ? E CTP . ? A CTP 501 ? 1_555 77.1 ? 4 O ? B GLU 59 ? A GLU 59 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O2B ? E CTP . ? A CTP 501 ? 1_555 128.5 ? 5 OD1 ? B ASP 61 ? A ASP 61 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O2B ? E CTP . ? A CTP 501 ? 1_555 72.8 ? 6 O1A ? E CTP . ? A CTP 501 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O2B ? E CTP . ? A CTP 501 ? 1_555 60.4 ? 7 O ? B GLU 59 ? A GLU 59 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O3G ? E CTP . ? A CTP 501 ? 1_555 122.7 ? 8 OD1 ? B ASP 61 ? A ASP 61 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O3G ? E CTP . ? A CTP 501 ? 1_555 134.8 ? 9 O1A ? E CTP . ? A CTP 501 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O3G ? E CTP . ? A CTP 501 ? 1_555 84.0 ? 10 O2B ? E CTP . ? A CTP 501 ? 1_555 MG ? D MG . ? A MG 503 ? 1_555 O3G ? E CTP . ? A CTP 501 ? 1_555 62.1 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? C ? 4 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR B 42 ? VAL B 45 ? TYR A 42 VAL A 45 A 2 GLU B 59 ? PRO B 67 ? GLU A 59 PRO A 67 A 3 VAL B 107 ? LYS B 116 ? VAL A 107 LYS A 116 A 4 VAL B 100 ? VAL B 104 ? VAL A 100 VAL A 104 A 5 SER B 89 ? ILE B 92 ? SER A 89 ILE A 92 B 1 GLU B 207 ? LYS B 210 ? GLU A 207 LYS A 210 B 2 THR B 199 ? ASP B 202 ? THR A 199 ASP A 202 B 3 PHE B 215 ? ASP B 218 ? PHE A 215 ASP A 218 B 4 ASP B 221 ? ASN B 225 ? ASP A 221 ASN A 225 C 1 PRO B 315 ? ALA B 322 ? PRO A 315 ALA A 322 C 2 PHE B 326 ? CYS B 333 ? PHE A 326 CYS A 333 C 3 ALA B 277 ? ARG B 284 ? ALA A 277 ARG A 284 C 4 GLU B 413 ? SER B 416 ? GLU A 413 SER A 416 D 1 VAL B 341 ? GLN B 348 ? VAL A 341 GLN A 348 D 2 ARG B 373 ? MET B 379 ? ARG A 373 MET A 379 D 3 PHE B 368 ? GLU B 370 ? PHE A 368 GLU A 370 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL B 45 ? N VAL A 45 O ASP B 61 ? O ASP A 61 A 2 3 N PHE B 66 ? N PHE A 66 O LYS B 116 ? O LYS A 116 A 3 4 O VAL B 111 ? O VAL A 111 N VAL B 100 ? N VAL A 100 A 4 5 O HIS B 101 ? O HIS A 101 N GLU B 91 ? N GLU A 91 B 1 2 O ARG B 209 ? O ARG A 209 N VAL B 200 ? N VAL A 200 B 2 3 N ILE B 201 ? N ILE A 201 O PHE B 215 ? O PHE A 215 B 3 4 N ASP B 218 ? N ASP A 218 O ARG B 224 ? O ARG A 224 C 1 2 N LEU B 316 ? N LEU A 316 O GLU B 332 ? O GLU A 332 C 2 3 O CYS B 333 ? O CYS A 333 N ALA B 277 ? N ALA A 277 C 3 4 N LYS B 282 ? N LYS A 282 O GLU B 413 ? O GLU A 413 D 1 2 N PHE B 342 ? N PHE A 342 O GLU B 378 ? O GLU A 378 D 2 3 O TRP B 375 ? O TRP A 375 N PHE B 368 ? N PHE A 368 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 502 ? 4 'BINDING SITE FOR RESIDUE SO4 A 502' AC2 Software A MG 503 ? 3 'BINDING SITE FOR RESIDUE MG A 503' AC3 Software A CTP 501 ? 19 'BINDING SITE FOR RESIDUE CTP A 501' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ARG B 299 ? ARG A 299 . ? 1_555 ? 2 AC1 4 ARG B 302 ? ARG A 302 . ? 1_555 ? 3 AC1 4 LYS B 303 ? LYS A 303 . ? 1_555 ? 4 AC1 4 HOH G . ? HOH A 623 . ? 1_555 ? 5 AC2 3 GLU B 59 ? GLU A 59 . ? 1_555 ? 6 AC2 3 ASP B 61 ? ASP A 61 . ? 1_555 ? 7 AC2 3 CTP E . ? CTP A 501 . ? 1_555 ? 8 AC3 19 GLY B 46 ? GLY A 46 . ? 1_555 ? 9 AC3 19 SER B 47 ? SER A 47 . ? 1_555 ? 10 AC3 19 ARG B 50 ? ARG A 50 . ? 1_555 ? 11 AC3 19 ASP B 61 ? ASP A 61 . ? 1_555 ? 12 AC3 19 THR B 130 ? THR A 130 . ? 1_555 ? 13 AC3 19 HIS B 133 ? HIS A 133 . ? 1_555 ? 14 AC3 19 LYS B 152 ? LYS A 152 . ? 1_555 ? 15 AC3 19 TYR B 161 ? TYR A 161 . ? 1_555 ? 16 AC3 19 TYR B 173 ? TYR A 173 . ? 1_555 ? 17 AC3 19 ARG B 224 ? ARG A 224 . ? 1_555 ? 18 AC3 19 MG D . ? MG A 503 . ? 1_555 ? 19 AC3 19 HOH G . ? HOH A 519 . ? 1_555 ? 20 AC3 19 HOH G . ? HOH A 525 . ? 1_555 ? 21 AC3 19 HOH G . ? HOH A 539 . ? 1_555 ? 22 AC3 19 HOH G . ? HOH A 565 . ? 1_555 ? 23 AC3 19 HOH G . ? HOH A 614 . ? 1_555 ? 24 AC3 19 HOH G . ? HOH A 615 . ? 1_555 ? 25 AC3 19 A A 32 ? A B 32 . ? 1_555 ? 26 AC3 19 C A 33 ? C B 33 . ? 1_555 ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 PHE _pdbx_validate_symm_contact.auth_seq_id_1 365 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 GLY _pdbx_validate_symm_contact.auth_seq_id_2 434 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 7_645 _pdbx_validate_symm_contact.dist 2.19 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 G _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 G _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.522 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.085 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 3 ? ? -28.98 -71.27 2 1 GLU A 37 ? ? -174.74 -32.48 3 1 VAL A 40 ? ? 75.30 130.20 4 1 VAL A 45 ? ? -125.90 -162.07 5 1 GLU A 91 ? ? -170.72 119.13 6 1 ARG A 93 ? ? -169.05 62.34 7 1 GLU A 96 ? ? -156.98 -49.69 8 1 LYS A 105 ? ? 39.66 48.04 9 1 GLU A 119 ? ? 64.42 118.02 10 1 TYR A 161 ? ? -66.59 -90.89 11 1 GLU A 222 ? ? -55.74 0.38 12 1 PRO A 249 ? ? -48.57 159.69 13 1 SER A 250 ? ? -177.01 143.81 14 1 PRO A 259 ? ? -49.57 -19.09 15 1 LEU A 260 ? ? 43.33 88.33 16 1 GLU A 261 ? ? -56.57 170.82 17 1 PRO A 264 ? ? -55.89 -4.10 18 1 LEU A 293 ? ? -58.79 -71.56 19 1 LEU A 316 ? ? -91.98 -66.05 20 1 ARG A 366 ? ? 74.98 109.73 21 1 TYR A 411 ? ? 175.79 140.47 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id U _pdbx_validate_planes.auth_asym_id B _pdbx_validate_planes.auth_seq_id 14 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.063 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CTP N1 N N N 146 CTP C2 C N N 147 CTP N3 N N N 148 CTP C4 C N N 149 CTP C5 C N N 150 CTP C6 C N N 151 CTP O2 O N N 152 CTP N4 N N N 153 CTP "C1'" C N R 154 CTP "C2'" C N R 155 CTP "O2'" O N N 156 CTP "C3'" C N S 157 CTP "C4'" C N R 158 CTP "O4'" O N N 159 CTP "O3'" O N N 160 CTP "C5'" C N N 161 CTP "O5'" O N N 162 CTP PA P N S 163 CTP O1A O N N 164 CTP O2A O N N 165 CTP O3A O N N 166 CTP PB P N R 167 CTP O1B O N N 168 CTP O2B O N N 169 CTP O3B O N N 170 CTP PG P N N 171 CTP O1G O N N 172 CTP O2G O N N 173 CTP O3G O N N 174 CTP H5 H N N 175 CTP H6 H N N 176 CTP HN41 H N N 177 CTP HN42 H N N 178 CTP "H1'" H N N 179 CTP "H2'" H N N 180 CTP "HO2'" H N N 181 CTP "H3'" H N N 182 CTP "H4'" H N N 183 CTP "HO3'" H N N 184 CTP "H5'1" H N N 185 CTP "H5'2" H N N 186 CTP HOA2 H N N 187 CTP HOB2 H N N 188 CTP HOG2 H N N 189 CTP HOG3 H N N 190 CYS N N N N 191 CYS CA C N R 192 CYS C C N N 193 CYS O O N N 194 CYS CB C N N 195 CYS SG S N N 196 CYS OXT O N N 197 CYS H H N N 198 CYS H2 H N N 199 CYS HA H N N 200 CYS HB2 H N N 201 CYS HB3 H N N 202 CYS HG H N N 203 CYS HXT H N N 204 G OP3 O N N 205 G P P N N 206 G OP1 O N N 207 G OP2 O N N 208 G "O5'" O N N 209 G "C5'" C N N 210 G "C4'" C N R 211 G "O4'" O N N 212 G "C3'" C N S 213 G "O3'" O N N 214 G "C2'" C N R 215 G "O2'" O N N 216 G "C1'" C N R 217 G N9 N Y N 218 G C8 C Y N 219 G N7 N Y N 220 G C5 C Y N 221 G C6 C N N 222 G O6 O N N 223 G N1 N N N 224 G C2 C N N 225 G N2 N N N 226 G N3 N N N 227 G C4 C Y N 228 G HOP3 H N N 229 G HOP2 H N N 230 G "H5'" H N N 231 G "H5''" H N N 232 G "H4'" H N N 233 G "H3'" H N N 234 G "HO3'" H N N 235 G "H2'" H N N 236 G "HO2'" H N N 237 G "H1'" H N N 238 G H8 H N N 239 G H1 H N N 240 G H21 H N N 241 G H22 H N N 242 GLN N N N N 243 GLN CA C N S 244 GLN C C N N 245 GLN O O N N 246 GLN CB C N N 247 GLN CG C N N 248 GLN CD C N N 249 GLN OE1 O N N 250 GLN NE2 N N N 251 GLN OXT O N N 252 GLN H H N N 253 GLN H2 H N N 254 GLN HA H N N 255 GLN HB2 H N N 256 GLN HB3 H N N 257 GLN HG2 H N N 258 GLN HG3 H N N 259 GLN HE21 H N N 260 GLN HE22 H N N 261 GLN HXT H N N 262 GLU N N N N 263 GLU CA C N S 264 GLU C C N N 265 GLU O O N N 266 GLU CB C N N 267 GLU CG C N N 268 GLU CD C N N 269 GLU OE1 O N N 270 GLU OE2 O N N 271 GLU OXT O N N 272 GLU H H N N 273 GLU H2 H N N 274 GLU HA H N N 275 GLU HB2 H N N 276 GLU HB3 H N N 277 GLU HG2 H N N 278 GLU HG3 H N N 279 GLU HE2 H N N 280 GLU HXT H N N 281 GLY N N N N 282 GLY CA C N N 283 GLY C C N N 284 GLY O O N N 285 GLY OXT O N N 286 GLY H H N N 287 GLY H2 H N N 288 GLY HA2 H N N 289 GLY HA3 H N N 290 GLY HXT H N N 291 HIS N N N N 292 HIS CA C N S 293 HIS C C N N 294 HIS O O N N 295 HIS CB C N N 296 HIS CG C Y N 297 HIS ND1 N Y N 298 HIS CD2 C Y N 299 HIS CE1 C Y N 300 HIS NE2 N Y N 301 HIS OXT O N N 302 HIS H H N N 303 HIS H2 H N N 304 HIS HA H N N 305 HIS HB2 H N N 306 HIS HB3 H N N 307 HIS HD1 H N N 308 HIS HD2 H N N 309 HIS HE1 H N N 310 HIS HE2 H N N 311 HIS HXT H N N 312 HOH O O N N 313 HOH H1 H N N 314 HOH H2 H N N 315 ILE N N N N 316 ILE CA C N S 317 ILE C C N N 318 ILE O O N N 319 ILE CB C N S 320 ILE CG1 C N N 321 ILE CG2 C N N 322 ILE CD1 C N N 323 ILE OXT O N N 324 ILE H H N N 325 ILE H2 H N N 326 ILE HA H N N 327 ILE HB H N N 328 ILE HG12 H N N 329 ILE HG13 H N N 330 ILE HG21 H N N 331 ILE HG22 H N N 332 ILE HG23 H N N 333 ILE HD11 H N N 334 ILE HD12 H N N 335 ILE HD13 H N N 336 ILE HXT H N N 337 LEU N N N N 338 LEU CA C N S 339 LEU C C N N 340 LEU O O N N 341 LEU CB C N N 342 LEU CG C N N 343 LEU CD1 C N N 344 LEU CD2 C N N 345 LEU OXT O N N 346 LEU H H N N 347 LEU H2 H N N 348 LEU HA H N N 349 LEU HB2 H N N 350 LEU HB3 H N N 351 LEU HG H N N 352 LEU HD11 H N N 353 LEU HD12 H N N 354 LEU HD13 H N N 355 LEU HD21 H N N 356 LEU HD22 H N N 357 LEU HD23 H N N 358 LEU HXT H N N 359 LYS N N N N 360 LYS CA C N S 361 LYS C C N N 362 LYS O O N N 363 LYS CB C N N 364 LYS CG C N N 365 LYS CD C N N 366 LYS CE C N N 367 LYS NZ N N N 368 LYS OXT O N N 369 LYS H H N N 370 LYS H2 H N N 371 LYS HA H N N 372 LYS HB2 H N N 373 LYS HB3 H N N 374 LYS HG2 H N N 375 LYS HG3 H N N 376 LYS HD2 H N N 377 LYS HD3 H N N 378 LYS HE2 H N N 379 LYS HE3 H N N 380 LYS HZ1 H N N 381 LYS HZ2 H N N 382 LYS HZ3 H N N 383 LYS HXT H N N 384 MET N N N N 385 MET CA C N S 386 MET C C N N 387 MET O O N N 388 MET CB C N N 389 MET CG C N N 390 MET SD S N N 391 MET CE C N N 392 MET OXT O N N 393 MET H H N N 394 MET H2 H N N 395 MET HA H N N 396 MET HB2 H N N 397 MET HB3 H N N 398 MET HG2 H N N 399 MET HG3 H N N 400 MET HE1 H N N 401 MET HE2 H N N 402 MET HE3 H N N 403 MET HXT H N N 404 MG MG MG N N 405 PHE N N N N 406 PHE CA C N S 407 PHE C C N N 408 PHE O O N N 409 PHE CB C N N 410 PHE CG C Y N 411 PHE CD1 C Y N 412 PHE CD2 C Y N 413 PHE CE1 C Y N 414 PHE CE2 C Y N 415 PHE CZ C Y N 416 PHE OXT O N N 417 PHE H H N N 418 PHE H2 H N N 419 PHE HA H N N 420 PHE HB2 H N N 421 PHE HB3 H N N 422 PHE HD1 H N N 423 PHE HD2 H N N 424 PHE HE1 H N N 425 PHE HE2 H N N 426 PHE HZ H N N 427 PHE HXT H N N 428 PRO N N N N 429 PRO CA C N S 430 PRO C C N N 431 PRO O O N N 432 PRO CB C N N 433 PRO CG C N N 434 PRO CD C N N 435 PRO OXT O N N 436 PRO H H N N 437 PRO HA H N N 438 PRO HB2 H N N 439 PRO HB3 H N N 440 PRO HG2 H N N 441 PRO HG3 H N N 442 PRO HD2 H N N 443 PRO HD3 H N N 444 PRO HXT H N N 445 SER N N N N 446 SER CA C N S 447 SER C C N N 448 SER O O N N 449 SER CB C N N 450 SER OG O N N 451 SER OXT O N N 452 SER H H N N 453 SER H2 H N N 454 SER HA H N N 455 SER HB2 H N N 456 SER HB3 H N N 457 SER HG H N N 458 SER HXT H N N 459 SO4 S S N N 460 SO4 O1 O N N 461 SO4 O2 O N N 462 SO4 O3 O N N 463 SO4 O4 O N N 464 THR N N N N 465 THR CA C N S 466 THR C C N N 467 THR O O N N 468 THR CB C N R 469 THR OG1 O N N 470 THR CG2 C N N 471 THR OXT O N N 472 THR H H N N 473 THR H2 H N N 474 THR HA H N N 475 THR HB H N N 476 THR HG1 H N N 477 THR HG21 H N N 478 THR HG22 H N N 479 THR HG23 H N N 480 THR HXT H N N 481 TRP N N N N 482 TRP CA C N S 483 TRP C C N N 484 TRP O O N N 485 TRP CB C N N 486 TRP CG C Y N 487 TRP CD1 C Y N 488 TRP CD2 C Y N 489 TRP NE1 N Y N 490 TRP CE2 C Y N 491 TRP CE3 C Y N 492 TRP CZ2 C Y N 493 TRP CZ3 C Y N 494 TRP CH2 C Y N 495 TRP OXT O N N 496 TRP H H N N 497 TRP H2 H N N 498 TRP HA H N N 499 TRP HB2 H N N 500 TRP HB3 H N N 501 TRP HD1 H N N 502 TRP HE1 H N N 503 TRP HE3 H N N 504 TRP HZ2 H N N 505 TRP HZ3 H N N 506 TRP HH2 H N N 507 TRP HXT H N N 508 TYR N N N N 509 TYR CA C N S 510 TYR C C N N 511 TYR O O N N 512 TYR CB C N N 513 TYR CG C Y N 514 TYR CD1 C Y N 515 TYR CD2 C Y N 516 TYR CE1 C Y N 517 TYR CE2 C Y N 518 TYR CZ C Y N 519 TYR OH O N N 520 TYR OXT O N N 521 TYR H H N N 522 TYR H2 H N N 523 TYR HA H N N 524 TYR HB2 H N N 525 TYR HB3 H N N 526 TYR HD1 H N N 527 TYR HD2 H N N 528 TYR HE1 H N N 529 TYR HE2 H N N 530 TYR HH H N N 531 TYR HXT H N N 532 U OP3 O N N 533 U P P N N 534 U OP1 O N N 535 U OP2 O N N 536 U "O5'" O N N 537 U "C5'" C N N 538 U "C4'" C N R 539 U "O4'" O N N 540 U "C3'" C N S 541 U "O3'" O N N 542 U "C2'" C N R 543 U "O2'" O N N 544 U "C1'" C N R 545 U N1 N N N 546 U C2 C N N 547 U O2 O N N 548 U N3 N N N 549 U C4 C N N 550 U O4 O N N 551 U C5 C N N 552 U C6 C N N 553 U HOP3 H N N 554 U HOP2 H N N 555 U "H5'" H N N 556 U "H5''" H N N 557 U "H4'" H N N 558 U "H3'" H N N 559 U "HO3'" H N N 560 U "H2'" H N N 561 U "HO2'" H N N 562 U "H1'" H N N 563 U H3 H N N 564 U H5 H N N 565 U H6 H N N 566 VAL N N N N 567 VAL CA C N S 568 VAL C C N N 569 VAL O O N N 570 VAL CB C N N 571 VAL CG1 C N N 572 VAL CG2 C N N 573 VAL OXT O N N 574 VAL H H N N 575 VAL H2 H N N 576 VAL HA H N N 577 VAL HB H N N 578 VAL HG11 H N N 579 VAL HG12 H N N 580 VAL HG13 H N N 581 VAL HG21 H N N 582 VAL HG22 H N N 583 VAL HG23 H N N 584 VAL HXT H N N 585 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CTP N1 C2 sing N N 145 CTP N1 C6 sing N N 146 CTP N1 "C1'" sing N N 147 CTP C2 N3 sing N N 148 CTP C2 O2 doub N N 149 CTP N3 C4 doub N N 150 CTP C4 C5 sing N N 151 CTP C4 N4 sing N N 152 CTP C5 C6 doub N N 153 CTP C5 H5 sing N N 154 CTP C6 H6 sing N N 155 CTP N4 HN41 sing N N 156 CTP N4 HN42 sing N N 157 CTP "C1'" "C2'" sing N N 158 CTP "C1'" "O4'" sing N N 159 CTP "C1'" "H1'" sing N N 160 CTP "C2'" "O2'" sing N N 161 CTP "C2'" "C3'" sing N N 162 CTP "C2'" "H2'" sing N N 163 CTP "O2'" "HO2'" sing N N 164 CTP "C3'" "C4'" sing N N 165 CTP "C3'" "O3'" sing N N 166 CTP "C3'" "H3'" sing N N 167 CTP "C4'" "O4'" sing N N 168 CTP "C4'" "C5'" sing N N 169 CTP "C4'" "H4'" sing N N 170 CTP "O3'" "HO3'" sing N N 171 CTP "C5'" "O5'" sing N N 172 CTP "C5'" "H5'1" sing N N 173 CTP "C5'" "H5'2" sing N N 174 CTP "O5'" PA sing N N 175 CTP PA O1A doub N N 176 CTP PA O2A sing N N 177 CTP PA O3A sing N N 178 CTP O2A HOA2 sing N N 179 CTP O3A PB sing N N 180 CTP PB O1B doub N N 181 CTP PB O2B sing N N 182 CTP PB O3B sing N N 183 CTP O2B HOB2 sing N N 184 CTP O3B PG sing N N 185 CTP PG O1G doub N N 186 CTP PG O2G sing N N 187 CTP PG O3G sing N N 188 CTP O2G HOG2 sing N N 189 CTP O3G HOG3 sing N N 190 CYS N CA sing N N 191 CYS N H sing N N 192 CYS N H2 sing N N 193 CYS CA C sing N N 194 CYS CA CB sing N N 195 CYS CA HA sing N N 196 CYS C O doub N N 197 CYS C OXT sing N N 198 CYS CB SG sing N N 199 CYS CB HB2 sing N N 200 CYS CB HB3 sing N N 201 CYS SG HG sing N N 202 CYS OXT HXT sing N N 203 G OP3 P sing N N 204 G OP3 HOP3 sing N N 205 G P OP1 doub N N 206 G P OP2 sing N N 207 G P "O5'" sing N N 208 G OP2 HOP2 sing N N 209 G "O5'" "C5'" sing N N 210 G "C5'" "C4'" sing N N 211 G "C5'" "H5'" sing N N 212 G "C5'" "H5''" sing N N 213 G "C4'" "O4'" sing N N 214 G "C4'" "C3'" sing N N 215 G "C4'" "H4'" sing N N 216 G "O4'" "C1'" sing N N 217 G "C3'" "O3'" sing N N 218 G "C3'" "C2'" sing N N 219 G "C3'" "H3'" sing N N 220 G "O3'" "HO3'" sing N N 221 G "C2'" "O2'" sing N N 222 G "C2'" "C1'" sing N N 223 G "C2'" "H2'" sing N N 224 G "O2'" "HO2'" sing N N 225 G "C1'" N9 sing N N 226 G "C1'" "H1'" sing N N 227 G N9 C8 sing Y N 228 G N9 C4 sing Y N 229 G C8 N7 doub Y N 230 G C8 H8 sing N N 231 G N7 C5 sing Y N 232 G C5 C6 sing N N 233 G C5 C4 doub Y N 234 G C6 O6 doub N N 235 G C6 N1 sing N N 236 G N1 C2 sing N N 237 G N1 H1 sing N N 238 G C2 N2 sing N N 239 G C2 N3 doub N N 240 G N2 H21 sing N N 241 G N2 H22 sing N N 242 G N3 C4 sing N N 243 GLN N CA sing N N 244 GLN N H sing N N 245 GLN N H2 sing N N 246 GLN CA C sing N N 247 GLN CA CB sing N N 248 GLN CA HA sing N N 249 GLN C O doub N N 250 GLN C OXT sing N N 251 GLN CB CG sing N N 252 GLN CB HB2 sing N N 253 GLN CB HB3 sing N N 254 GLN CG CD sing N N 255 GLN CG HG2 sing N N 256 GLN CG HG3 sing N N 257 GLN CD OE1 doub N N 258 GLN CD NE2 sing N N 259 GLN NE2 HE21 sing N N 260 GLN NE2 HE22 sing N N 261 GLN OXT HXT sing N N 262 GLU N CA sing N N 263 GLU N H sing N N 264 GLU N H2 sing N N 265 GLU CA C sing N N 266 GLU CA CB sing N N 267 GLU CA HA sing N N 268 GLU C O doub N N 269 GLU C OXT sing N N 270 GLU CB CG sing N N 271 GLU CB HB2 sing N N 272 GLU CB HB3 sing N N 273 GLU CG CD sing N N 274 GLU CG HG2 sing N N 275 GLU CG HG3 sing N N 276 GLU CD OE1 doub N N 277 GLU CD OE2 sing N N 278 GLU OE2 HE2 sing N N 279 GLU OXT HXT sing N N 280 GLY N CA sing N N 281 GLY N H sing N N 282 GLY N H2 sing N N 283 GLY CA C sing N N 284 GLY CA HA2 sing N N 285 GLY CA HA3 sing N N 286 GLY C O doub N N 287 GLY C OXT sing N N 288 GLY OXT HXT sing N N 289 HIS N CA sing N N 290 HIS N H sing N N 291 HIS N H2 sing N N 292 HIS CA C sing N N 293 HIS CA CB sing N N 294 HIS CA HA sing N N 295 HIS C O doub N N 296 HIS C OXT sing N N 297 HIS CB CG sing N N 298 HIS CB HB2 sing N N 299 HIS CB HB3 sing N N 300 HIS CG ND1 sing Y N 301 HIS CG CD2 doub Y N 302 HIS ND1 CE1 doub Y N 303 HIS ND1 HD1 sing N N 304 HIS CD2 NE2 sing Y N 305 HIS CD2 HD2 sing N N 306 HIS CE1 NE2 sing Y N 307 HIS CE1 HE1 sing N N 308 HIS NE2 HE2 sing N N 309 HIS OXT HXT sing N N 310 HOH O H1 sing N N 311 HOH O H2 sing N N 312 ILE N CA sing N N 313 ILE N H sing N N 314 ILE N H2 sing N N 315 ILE CA C sing N N 316 ILE CA CB sing N N 317 ILE CA HA sing N N 318 ILE C O doub N N 319 ILE C OXT sing N N 320 ILE CB CG1 sing N N 321 ILE CB CG2 sing N N 322 ILE CB HB sing N N 323 ILE CG1 CD1 sing N N 324 ILE CG1 HG12 sing N N 325 ILE CG1 HG13 sing N N 326 ILE CG2 HG21 sing N N 327 ILE CG2 HG22 sing N N 328 ILE CG2 HG23 sing N N 329 ILE CD1 HD11 sing N N 330 ILE CD1 HD12 sing N N 331 ILE CD1 HD13 sing N N 332 ILE OXT HXT sing N N 333 LEU N CA sing N N 334 LEU N H sing N N 335 LEU N H2 sing N N 336 LEU CA C sing N N 337 LEU CA CB sing N N 338 LEU CA HA sing N N 339 LEU C O doub N N 340 LEU C OXT sing N N 341 LEU CB CG sing N N 342 LEU CB HB2 sing N N 343 LEU CB HB3 sing N N 344 LEU CG CD1 sing N N 345 LEU CG CD2 sing N N 346 LEU CG HG sing N N 347 LEU CD1 HD11 sing N N 348 LEU CD1 HD12 sing N N 349 LEU CD1 HD13 sing N N 350 LEU CD2 HD21 sing N N 351 LEU CD2 HD22 sing N N 352 LEU CD2 HD23 sing N N 353 LEU OXT HXT sing N N 354 LYS N CA sing N N 355 LYS N H sing N N 356 LYS N H2 sing N N 357 LYS CA C sing N N 358 LYS CA CB sing N N 359 LYS CA HA sing N N 360 LYS C O doub N N 361 LYS C OXT sing N N 362 LYS CB CG sing N N 363 LYS CB HB2 sing N N 364 LYS CB HB3 sing N N 365 LYS CG CD sing N N 366 LYS CG HG2 sing N N 367 LYS CG HG3 sing N N 368 LYS CD CE sing N N 369 LYS CD HD2 sing N N 370 LYS CD HD3 sing N N 371 LYS CE NZ sing N N 372 LYS CE HE2 sing N N 373 LYS CE HE3 sing N N 374 LYS NZ HZ1 sing N N 375 LYS NZ HZ2 sing N N 376 LYS NZ HZ3 sing N N 377 LYS OXT HXT sing N N 378 MET N CA sing N N 379 MET N H sing N N 380 MET N H2 sing N N 381 MET CA C sing N N 382 MET CA CB sing N N 383 MET CA HA sing N N 384 MET C O doub N N 385 MET C OXT sing N N 386 MET CB CG sing N N 387 MET CB HB2 sing N N 388 MET CB HB3 sing N N 389 MET CG SD sing N N 390 MET CG HG2 sing N N 391 MET CG HG3 sing N N 392 MET SD CE sing N N 393 MET CE HE1 sing N N 394 MET CE HE2 sing N N 395 MET CE HE3 sing N N 396 MET OXT HXT sing N N 397 PHE N CA sing N N 398 PHE N H sing N N 399 PHE N H2 sing N N 400 PHE CA C sing N N 401 PHE CA CB sing N N 402 PHE CA HA sing N N 403 PHE C O doub N N 404 PHE C OXT sing N N 405 PHE CB CG sing N N 406 PHE CB HB2 sing N N 407 PHE CB HB3 sing N N 408 PHE CG CD1 doub Y N 409 PHE CG CD2 sing Y N 410 PHE CD1 CE1 sing Y N 411 PHE CD1 HD1 sing N N 412 PHE CD2 CE2 doub Y N 413 PHE CD2 HD2 sing N N 414 PHE CE1 CZ doub Y N 415 PHE CE1 HE1 sing N N 416 PHE CE2 CZ sing Y N 417 PHE CE2 HE2 sing N N 418 PHE CZ HZ sing N N 419 PHE OXT HXT sing N N 420 PRO N CA sing N N 421 PRO N CD sing N N 422 PRO N H sing N N 423 PRO CA C sing N N 424 PRO CA CB sing N N 425 PRO CA HA sing N N 426 PRO C O doub N N 427 PRO C OXT sing N N 428 PRO CB CG sing N N 429 PRO CB HB2 sing N N 430 PRO CB HB3 sing N N 431 PRO CG CD sing N N 432 PRO CG HG2 sing N N 433 PRO CG HG3 sing N N 434 PRO CD HD2 sing N N 435 PRO CD HD3 sing N N 436 PRO OXT HXT sing N N 437 SER N CA sing N N 438 SER N H sing N N 439 SER N H2 sing N N 440 SER CA C sing N N 441 SER CA CB sing N N 442 SER CA HA sing N N 443 SER C O doub N N 444 SER C OXT sing N N 445 SER CB OG sing N N 446 SER CB HB2 sing N N 447 SER CB HB3 sing N N 448 SER OG HG sing N N 449 SER OXT HXT sing N N 450 SO4 S O1 doub N N 451 SO4 S O2 doub N N 452 SO4 S O3 sing N N 453 SO4 S O4 sing N N 454 THR N CA sing N N 455 THR N H sing N N 456 THR N H2 sing N N 457 THR CA C sing N N 458 THR CA CB sing N N 459 THR CA HA sing N N 460 THR C O doub N N 461 THR C OXT sing N N 462 THR CB OG1 sing N N 463 THR CB CG2 sing N N 464 THR CB HB sing N N 465 THR OG1 HG1 sing N N 466 THR CG2 HG21 sing N N 467 THR CG2 HG22 sing N N 468 THR CG2 HG23 sing N N 469 THR OXT HXT sing N N 470 TRP N CA sing N N 471 TRP N H sing N N 472 TRP N H2 sing N N 473 TRP CA C sing N N 474 TRP CA CB sing N N 475 TRP CA HA sing N N 476 TRP C O doub N N 477 TRP C OXT sing N N 478 TRP CB CG sing N N 479 TRP CB HB2 sing N N 480 TRP CB HB3 sing N N 481 TRP CG CD1 doub Y N 482 TRP CG CD2 sing Y N 483 TRP CD1 NE1 sing Y N 484 TRP CD1 HD1 sing N N 485 TRP CD2 CE2 doub Y N 486 TRP CD2 CE3 sing Y N 487 TRP NE1 CE2 sing Y N 488 TRP NE1 HE1 sing N N 489 TRP CE2 CZ2 sing Y N 490 TRP CE3 CZ3 doub Y N 491 TRP CE3 HE3 sing N N 492 TRP CZ2 CH2 doub Y N 493 TRP CZ2 HZ2 sing N N 494 TRP CZ3 CH2 sing Y N 495 TRP CZ3 HZ3 sing N N 496 TRP CH2 HH2 sing N N 497 TRP OXT HXT sing N N 498 TYR N CA sing N N 499 TYR N H sing N N 500 TYR N H2 sing N N 501 TYR CA C sing N N 502 TYR CA CB sing N N 503 TYR CA HA sing N N 504 TYR C O doub N N 505 TYR C OXT sing N N 506 TYR CB CG sing N N 507 TYR CB HB2 sing N N 508 TYR CB HB3 sing N N 509 TYR CG CD1 doub Y N 510 TYR CG CD2 sing Y N 511 TYR CD1 CE1 sing Y N 512 TYR CD1 HD1 sing N N 513 TYR CD2 CE2 doub Y N 514 TYR CD2 HD2 sing N N 515 TYR CE1 CZ doub Y N 516 TYR CE1 HE1 sing N N 517 TYR CE2 CZ sing Y N 518 TYR CE2 HE2 sing N N 519 TYR CZ OH sing N N 520 TYR OH HH sing N N 521 TYR OXT HXT sing N N 522 U OP3 P sing N N 523 U OP3 HOP3 sing N N 524 U P OP1 doub N N 525 U P OP2 sing N N 526 U P "O5'" sing N N 527 U OP2 HOP2 sing N N 528 U "O5'" "C5'" sing N N 529 U "C5'" "C4'" sing N N 530 U "C5'" "H5'" sing N N 531 U "C5'" "H5''" sing N N 532 U "C4'" "O4'" sing N N 533 U "C4'" "C3'" sing N N 534 U "C4'" "H4'" sing N N 535 U "O4'" "C1'" sing N N 536 U "C3'" "O3'" sing N N 537 U "C3'" "C2'" sing N N 538 U "C3'" "H3'" sing N N 539 U "O3'" "HO3'" sing N N 540 U "C2'" "O2'" sing N N 541 U "C2'" "C1'" sing N N 542 U "C2'" "H2'" sing N N 543 U "O2'" "HO2'" sing N N 544 U "C1'" N1 sing N N 545 U "C1'" "H1'" sing N N 546 U N1 C2 sing N N 547 U N1 C6 sing N N 548 U C2 O2 doub N N 549 U C2 N3 sing N N 550 U N3 C4 sing N N 551 U N3 H3 sing N N 552 U C4 O4 doub N N 553 U C4 C5 sing N N 554 U C5 C6 doub N N 555 U C5 H5 sing N N 556 U C6 H6 sing N N 557 VAL N CA sing N N 558 VAL N H sing N N 559 VAL N H2 sing N N 560 VAL CA C sing N N 561 VAL CA CB sing N N 562 VAL CA HA sing N N 563 VAL C O doub N N 564 VAL C OXT sing N N 565 VAL CB CG1 sing N N 566 VAL CB CG2 sing N N 567 VAL CB HB sing N N 568 VAL CG1 HG11 sing N N 569 VAL CG1 HG12 sing N N 570 VAL CG1 HG13 sing N N 571 VAL CG2 HG21 sing N N 572 VAL CG2 HG22 sing N N 573 VAL CG2 HG23 sing N N 574 VAL OXT HXT sing N N 575 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2DR8 'double helix' 2DR8 'a-form double helix' 2DR8 'hairpin loop' 2DR8 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 31 1_555 -0.148 -0.221 0.642 7.872 -14.514 -3.726 1 B_G1:C31_B B 1 ? B 31 ? 19 1 1 A G 2 1_555 A C 30 1_555 -0.310 -0.047 0.402 15.470 -10.639 3.726 2 B_G2:C30_B B 2 ? B 30 ? 19 1 1 A C 3 1_555 A G 29 1_555 0.090 0.093 -0.375 11.899 -16.715 2.964 3 B_C3:G29_B B 3 ? B 29 ? 19 1 1 A C 4 1_555 A G 28 1_555 -0.214 -0.110 -0.729 5.732 -12.105 -0.142 4 B_C4:G28_B B 4 ? B 28 ? 19 1 1 A C 5 1_555 A G 27 1_555 0.548 -0.078 -0.353 6.448 -3.395 3.388 5 B_C5:G27_B B 5 ? B 27 ? 19 1 1 A G 6 1_555 A U 26 1_555 -1.641 0.176 -0.577 -8.909 -3.975 14.492 6 B_G6:U26_B B 6 ? B 26 ? ? 1 1 A G 7 1_555 A C 25 1_555 0.618 -0.383 -0.544 -4.690 -7.915 5.213 7 B_G7:C25_B B 7 ? B 25 ? 19 1 1 A G 8 1_555 A C 24 1_555 0.398 -0.161 -0.120 -6.169 -7.965 -3.054 8 B_G8:C24_B B 8 ? B 24 ? 19 1 1 A G 9 1_555 A C 23 1_555 -0.558 -0.169 -0.100 -15.091 -17.619 3.369 9 B_G9:C23_B B 9 ? B 23 ? 19 1 1 A C 10 1_555 A G 22 1_555 0.145 -0.286 0.024 -3.132 -6.981 -1.742 10 B_C10:G22_B B 10 ? B 22 ? 19 1 1 A G 11 1_555 A C 21 1_555 0.144 -0.338 -0.081 -6.579 -14.725 -2.509 11 B_G11:C21_B B 11 ? B 21 ? 19 1 1 A G 12 1_555 A C 20 1_555 1.035 0.154 0.093 -9.965 -16.248 -2.091 12 B_G12:C20_B B 12 ? B 20 ? 19 1 1 A U 13 1_555 A A 17 1_555 4.473 -2.425 -0.149 -7.523 3.383 -81.307 13 B_U13:A17_B B 13 ? B 17 ? 24 4 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 31 1_555 A G 2 1_555 A C 30 1_555 0.211 -1.488 2.941 -2.316 8.058 31.893 -3.780 -0.704 2.481 14.356 4.127 32.949 1 BB_G1G2:C30C31_BB B 1 ? B 31 ? B 2 ? B 30 ? 1 A G 2 1_555 A C 30 1_555 A C 3 1_555 A G 29 1_555 -0.096 -1.572 3.321 2.703 5.252 35.024 -3.330 0.544 3.046 8.650 -4.453 35.503 2 BB_G2C3:G29C30_BB B 2 ? B 30 ? B 3 ? B 29 ? 1 A C 3 1_555 A G 29 1_555 A C 4 1_555 A G 28 1_555 -0.470 -1.810 3.513 -0.374 9.336 29.890 -5.112 0.802 2.838 17.569 0.704 31.284 3 BB_C3C4:G28G29_BB B 3 ? B 29 ? B 4 ? B 28 ? 1 A C 4 1_555 A G 28 1_555 A C 5 1_555 A G 27 1_555 -0.174 -1.769 3.412 -2.606 8.466 32.434 -4.418 -0.116 2.877 14.814 4.561 33.591 4 BB_C4C5:G27G28_BB B 4 ? B 28 ? B 5 ? B 27 ? 1 A C 5 1_555 A G 27 1_555 A G 6 1_555 A U 26 1_555 1.413 -2.362 3.634 0.443 11.148 18.858 -10.221 -3.562 1.972 30.779 -1.223 21.886 5 BB_C5G6:U26G27_BB B 5 ? B 27 ? B 6 ? B 26 ? 1 A G 6 1_555 A U 26 1_555 A G 7 1_555 A C 25 1_555 -1.351 -1.355 3.347 0.711 3.718 36.366 -2.672 2.251 3.172 5.937 -1.135 36.556 6 BB_G6G7:C25U26_BB B 6 ? B 26 ? B 7 ? B 25 ? 1 A G 7 1_555 A C 25 1_555 A G 8 1_555 A C 24 1_555 0.235 -2.368 3.385 -1.591 6.731 25.720 -6.806 -0.904 2.670 14.784 3.495 26.619 7 BB_G7G8:C24C25_BB B 7 ? B 25 ? B 8 ? B 24 ? 1 A G 8 1_555 A C 24 1_555 A G 9 1_555 A C 23 1_555 0.697 -1.957 3.294 3.597 11.999 28.741 -5.680 -0.677 2.374 22.852 -6.849 31.300 8 BB_G8G9:C23C24_BB B 8 ? B 24 ? B 9 ? B 23 ? 1 A G 9 1_555 A C 23 1_555 A C 10 1_555 A G 22 1_555 0.366 -2.134 3.013 2.670 -0.296 31.554 -3.860 -0.213 3.052 -0.543 -4.898 31.665 9 BB_G9C10:G22C23_BB B 9 ? B 23 ? B 10 ? B 22 ? 1 A C 10 1_555 A G 22 1_555 A G 11 1_555 A C 21 1_555 -0.893 -2.046 3.350 -0.588 8.895 26.476 -6.209 1.721 2.559 18.758 1.239 27.911 10 BB_C10G11:C21G22_BB B 10 ? B 22 ? B 11 ? B 21 ? 1 A G 11 1_555 A C 21 1_555 A G 12 1_555 A C 20 1_555 0.464 -1.827 3.323 0.361 6.672 39.909 -3.370 -0.632 2.996 9.693 -0.524 40.442 11 BB_G11G12:C20C21_BB B 11 ? B 21 ? B 12 ? B 20 ? 1 A G 12 1_555 A C 20 1_555 A U 13 1_555 A A 17 1_555 -1.714 -1.751 3.166 3.249 -2.049 74.771 -1.380 1.506 3.140 -1.686 -2.674 74.855 12 BB_G12U13:A17C20_BB B 12 ? B 20 ? B 13 ? B 17 ? # _atom_sites.entry_id 2DR8 _atom_sites.fract_transf_matrix[1][1] 0.017233 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017233 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.002328 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_