HEADER CONTRACTILE PROTEIN 09-JUN-06 2DRM TITLE ACANTHAMOEBA MYOSIN I SH3 DOMAIN BOUND TO ACAN125 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACANTHAMOEBA MYOSIN IB; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: SH3 DOMAIN; COMPND 5 SYNONYM: MYOSIN HEAVY CHAIN IL; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 18-MER PEPTIDE FROM ACAN125; COMPND 9 CHAIN: E, G; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACANTHAMOEBA; SOURCE 3 ORGANISM_TAXID: 5754; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PGEX; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY IN ACANTHAMOEBA. KEYWDS SH3 DOMAIN, CONTRACTILE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.HOUDUSSE,A.BAHLOUL,E.M.OSTAP REVDAT 5 25-OCT-23 2DRM 1 REMARK SEQADV REVDAT 4 11-OCT-17 2DRM 1 REMARK REVDAT 3 13-JUL-11 2DRM 1 VERSN REVDAT 2 24-FEB-09 2DRM 1 VERSN REVDAT 1 29-MAY-07 2DRM 0 JRNL AUTH A.HOUDUSSE,A.BAHLOUL,E.M.OSTAP,S.AROLD JRNL TITL THE CRYSTAL STRUCTURE OF THE SH3 DOMAIN OF ACANTHAMOEBA JRNL TITL 2 MYOSIN IB BOUND TO ACAN125 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.6 REMARK 3 NUMBER OF REFLECTIONS : 37379 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1977 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.39 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2673 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2160 REMARK 3 BIN FREE R VALUE SET COUNT : 139 REMARK 3 BIN FREE R VALUE : 0.2680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2075 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 269 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.11000 REMARK 3 B22 (A**2) : -0.64000 REMARK 3 B33 (A**2) : 0.53000 REMARK 3 B12 (A**2) : -0.02000 REMARK 3 B13 (A**2) : -0.10000 REMARK 3 B23 (A**2) : -0.02000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.077 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.074 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.047 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.108 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2192 ; 0.010 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1834 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2993 ; 1.204 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4307 ; 0.767 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 261 ; 5.784 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 294 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2439 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 401 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 412 ; 0.229 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2348 ; 0.258 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1235 ; 0.089 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 232 ; 0.138 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 36 ; 0.164 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 186 ; 0.286 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 56 ; 0.109 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1328 ; 0.655 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2123 ; 1.176 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 864 ; 1.630 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 870 ; 2.433 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2DRM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-JUN-06. REMARK 100 THE DEPOSITION ID IS D_1000025760. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.86 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44074 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.290 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.02000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.29 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 53.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 2DRK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 27.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 5.2, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 280K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR G 19 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 8 CG CD CE NZ REMARK 470 LYS B 8 CG CD CE NZ REMARK 470 LYS C 8 CG CD CE NZ REMARK 470 LYS C 47 CG CD CE NZ REMARK 470 LYS D 8 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO B 3 O HOH B 1163 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 19 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP B 14 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP B 19 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP C 19 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP D 14 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 37 8.60 106.43 REMARK 500 ALA B 37 9.70 104.77 REMARK 500 ALA C 37 8.27 105.34 REMARK 500 ALA D 37 9.19 105.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 G 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 1008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL E 1100 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 1102 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 1103 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2DRK RELATED DB: PDB DBREF 2DRM A 6 59 UNP P19706 MYSB_ACACA 1094 1147 DBREF 2DRM B 6 59 UNP P19706 MYSB_ACACA 1094 1147 DBREF 2DRM C 6 59 UNP P19706 MYSB_ACACA 1094 1147 DBREF 2DRM D 6 59 UNP P19706 MYSB_ACACA 1094 1147 DBREF 2DRM E 2 19 PDB 2DRM 2DRM 2 19 DBREF 2DRM G 2 19 PDB 2DRM 2DRM 2 19 SEQADV 2DRM GLY A 2 UNP P19706 CLONING ARTIFACT SEQADV 2DRM PRO A 3 UNP P19706 CLONING ARTIFACT SEQADV 2DRM GLY A 4 UNP P19706 CLONING ARTIFACT SEQADV 2DRM ILE A 5 UNP P19706 CLONING ARTIFACT SEQADV 2DRM GLY B 2 UNP P19706 CLONING ARTIFACT SEQADV 2DRM PRO B 3 UNP P19706 CLONING ARTIFACT SEQADV 2DRM GLY B 4 UNP P19706 CLONING ARTIFACT SEQADV 2DRM ILE B 5 UNP P19706 CLONING ARTIFACT SEQADV 2DRM GLY C 2 UNP P19706 CLONING ARTIFACT SEQADV 2DRM PRO C 3 UNP P19706 CLONING ARTIFACT SEQADV 2DRM GLY C 4 UNP P19706 CLONING ARTIFACT SEQADV 2DRM ILE C 5 UNP P19706 CLONING ARTIFACT SEQADV 2DRM GLY D 2 UNP P19706 CLONING ARTIFACT SEQADV 2DRM PRO D 3 UNP P19706 CLONING ARTIFACT SEQADV 2DRM GLY D 4 UNP P19706 CLONING ARTIFACT SEQADV 2DRM ILE D 5 UNP P19706 CLONING ARTIFACT SEQRES 1 A 58 GLY PRO GLY ILE GLN VAL LYS ALA LEU TYR ASP TYR ASP SEQRES 2 A 58 ALA GLN THR GLY ASP GLU LEU THR PHE LYS GLU GLY ASP SEQRES 3 A 58 THR ILE ILE VAL HIS GLN LYS ASP PRO ALA GLY TRP TRP SEQRES 4 A 58 GLU GLY GLU LEU ASN GLY LYS ARG GLY TRP VAL PRO ALA SEQRES 5 A 58 ASN TYR VAL GLN ASP ILE SEQRES 1 B 58 GLY PRO GLY ILE GLN VAL LYS ALA LEU TYR ASP TYR ASP SEQRES 2 B 58 ALA GLN THR GLY ASP GLU LEU THR PHE LYS GLU GLY ASP SEQRES 3 B 58 THR ILE ILE VAL HIS GLN LYS ASP PRO ALA GLY TRP TRP SEQRES 4 B 58 GLU GLY GLU LEU ASN GLY LYS ARG GLY TRP VAL PRO ALA SEQRES 5 B 58 ASN TYR VAL GLN ASP ILE SEQRES 1 C 58 GLY PRO GLY ILE GLN VAL LYS ALA LEU TYR ASP TYR ASP SEQRES 2 C 58 ALA GLN THR GLY ASP GLU LEU THR PHE LYS GLU GLY ASP SEQRES 3 C 58 THR ILE ILE VAL HIS GLN LYS ASP PRO ALA GLY TRP TRP SEQRES 4 C 58 GLU GLY GLU LEU ASN GLY LYS ARG GLY TRP VAL PRO ALA SEQRES 5 C 58 ASN TYR VAL GLN ASP ILE SEQRES 1 D 58 GLY PRO GLY ILE GLN VAL LYS ALA LEU TYR ASP TYR ASP SEQRES 2 D 58 ALA GLN THR GLY ASP GLU LEU THR PHE LYS GLU GLY ASP SEQRES 3 D 58 THR ILE ILE VAL HIS GLN LYS ASP PRO ALA GLY TRP TRP SEQRES 4 D 58 GLU GLY GLU LEU ASN GLY LYS ARG GLY TRP VAL PRO ALA SEQRES 5 D 58 ASN TYR VAL GLN ASP ILE SEQRES 1 E 18 ALA LYS PRO VAL PRO PRO PRO ARG GLY ALA LYS PRO ALA SEQRES 2 E 18 PRO PRO PRO ARG THR SEQRES 1 G 18 ALA LYS PRO VAL PRO PRO PRO ARG GLY ALA LYS PRO ALA SEQRES 2 G 18 PRO PRO PRO ARG THR HET SO4 A1002 5 HET SO4 A1005 5 HET SO4 A1007 5 HET SO4 B1006 5 HET GOL B1101 6 HET SO4 C1004 5 HET GOL C1102 6 HET SO4 D1008 5 HET GOL D1103 6 HET SO4 E1001 5 HET GOL E1100 6 HET SO4 G1003 5 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 7 SO4 8(O4 S 2-) FORMUL 11 GOL 4(C3 H8 O3) FORMUL 19 HOH *269(H2 O) SHEET 1 A 5 LYS A 47 PRO A 52 0 SHEET 2 A 5 TRP A 39 LEU A 44 -1 N GLY A 42 O GLY A 49 SHEET 3 A 5 THR A 28 GLN A 33 -1 N HIS A 32 O GLU A 41 SHEET 4 A 5 ILE A 5 ALA A 9 -1 N ILE A 5 O VAL A 31 SHEET 5 A 5 VAL A 56 ASP A 58 -1 O GLN A 57 N LYS A 8 SHEET 1 B 5 LYS B 47 PRO B 52 0 SHEET 2 B 5 TRP B 39 LEU B 44 -1 N GLY B 42 O GLY B 49 SHEET 3 B 5 THR B 28 GLN B 33 -1 N ILE B 30 O GLU B 43 SHEET 4 B 5 ILE B 5 ALA B 9 -1 N ILE B 5 O VAL B 31 SHEET 5 B 5 VAL B 56 ASP B 58 -1 O GLN B 57 N LYS B 8 SHEET 1 C 5 LYS C 47 PRO C 52 0 SHEET 2 C 5 TRP C 39 LEU C 44 -1 N GLY C 42 O GLY C 49 SHEET 3 C 5 THR C 28 GLN C 33 -1 N ILE C 30 O GLU C 43 SHEET 4 C 5 ILE C 5 ALA C 9 -1 N ILE C 5 O VAL C 31 SHEET 5 C 5 VAL C 56 ASP C 58 -1 O GLN C 57 N LYS C 8 SHEET 1 D 5 LYS D 47 PRO D 52 0 SHEET 2 D 5 TRP D 39 LEU D 44 -1 N GLY D 42 O GLY D 49 SHEET 3 D 5 THR D 28 GLN D 33 -1 N ILE D 30 O GLU D 43 SHEET 4 D 5 ILE D 5 ALA D 9 -1 N ILE D 5 O VAL D 31 SHEET 5 D 5 VAL D 56 ASP D 58 -1 O GLN D 57 N LYS D 8 SITE 1 AC1 8 GLN A 57 HIS B 32 GLN B 33 ARG B 48 SITE 2 AC1 8 HOH B1163 ARG E 9 HOH E 150 HOH E 247 SITE 1 AC2 6 HIS A 32 GLN A 33 ARG A 48 GLN B 57 SITE 2 AC2 6 ARG E 18 THR E 19 SITE 1 AC3 7 GLN C 57 HIS D 32 GLN D 33 ARG D 48 SITE 2 AC3 7 ARG G 9 HOH G 208 HOH G 249 SITE 1 AC4 2 LYS C 34 TRP C 40 SITE 1 AC5 5 HIS C 32 GLN C 33 ARG C 48 GLN D 57 SITE 2 AC5 5 ARG G 18 SITE 1 AC6 4 THR B 22 LYS D 34 TRP D 40 HOH D1148 SITE 1 AC7 4 LYS A 34 TRP A 40 GLU B 25 HOH B1159 SITE 1 AC8 5 LYS B 34 TRP B 40 HOH B1132 THR D 22 SITE 2 AC8 5 HOH D1130 SITE 1 AC9 11 THR A 17 GLU A 20 TRP A 39 TRP A 50 SITE 2 AC9 11 HOH A1026 HOH A1029 ARG E 9 GLY E 10 SITE 3 AC9 11 ALA E 11 LYS E 12 HOH E 171 SITE 1 BC1 10 THR B 17 GLU B 20 TRP B 39 TRP B 50 SITE 2 BC1 10 HOH B1117 HOH B1136 HOH B1143 ALA E 2 SITE 3 BC1 10 LYS E 3 ARG E 18 SITE 1 BC2 11 THR C 17 GLU C 20 TRP C 39 TRP C 50 SITE 2 BC2 11 HOH C1120 HOH C1129 HOH C1140 ARG G 9 SITE 3 BC2 11 GLY G 10 ALA G 11 LYS G 12 SITE 1 BC3 9 THR D 17 GLU D 20 TRP D 39 TRP D 50 SITE 2 BC3 9 HOH D1122 HOH D1146 ALA G 2 LYS G 3 SITE 3 BC3 9 ARG G 18 CRYST1 29.969 37.861 44.506 90.28 90.11 90.64 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.033368 0.000373 0.000066 0.00000 SCALE2 0.000000 0.026414 0.000130 0.00000 SCALE3 0.000000 0.000000 0.022469 0.00000