HEADER SIGNALING PROTEIN 07-JUL-06 2DSV TITLE INTERACTIONS OF PROTECTIVE SIGNALLING FACTOR WITH CHITIN-LIKE TITLE 2 POLYSACCHARIDE: CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN SIGNALLING TITLE 3 PROTEIN FROM SHEEP (SPS-40) AND A HEXASACCHARIDE AT 2.5A RESOLUTION CAVEAT 2DSV NAG B 2 HAS WRONG CHIRALITY AT ATOM C1 MAN B 3 HAS WRONG CAVEAT 2 2DSV CHIRALITY AT ATOM C1 MAN B 4 HAS WRONG CHIRALITY AT ATOM C1 CAVEAT 3 2DSV NAG C 1 HAS WRONG CHIRALITY AT ATOM C1 NAG C 3 HAS WRONG CAVEAT 4 2DSV CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHITINASE-3-LIKE PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SPS-40, SIGNAL-PROCESSING PROTEIN, SECRETORY GLYOPROTEIN OF COMPND 5 40 KDA SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: OVIS ARIES; SOURCE 3 ORGANISM_COMMON: SHEEP; SOURCE 4 ORGANISM_TAXID: 9940; SOURCE 5 SECRETION: MILK, MAMMARY GLAND KEYWDS SPS-40, HEXASACCHARIDE, COMPLEX, INVOLUTION, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.B.SRIVASTAVA,A.S.ETHAYATHULLA,J.KUMAR,N.SINGH,S.SHARMA,A.BHUSHAN, AUTHOR 2 A.SRINIVASAN,T.P.SINGH REVDAT 7 13-NOV-24 2DSV 1 REMARK REVDAT 6 25-OCT-23 2DSV 1 HETSYN REVDAT 5 29-JUL-20 2DSV 1 CAVEAT COMPND REMARK HETNAM REVDAT 5 2 1 LINK SITE ATOM REVDAT 4 13-JUL-11 2DSV 1 VERSN REVDAT 3 24-FEB-09 2DSV 1 VERSN REVDAT 2 17-JUL-07 2DSV 1 REVDAT 1 01-AUG-06 2DSV 0 SPRSDE 01-AUG-06 2DSV 2B2L JRNL AUTH D.B.SRIVASTAVA,A.S.ETHAYATHULLA,J.KUMAR,R.K.SOMVANSHI, JRNL AUTH 2 S.SHARMA,S.DEY,T.P.SINGH JRNL TITL CARBOHYDRATE BINDING PROPERTIES AND CARBOHYDRATE INDUCED JRNL TITL 2 CONFORMATIONAL SWITCH IN SHEEP SECRETORY GLYCOPROTEIN JRNL TITL 3 (SPS-40): CRYSTAL STRUCTURES OF FOUR COMPLEXES OF SPS-40 JRNL TITL 4 WITH CHITIN-LIKE OLIGOSACCHARIDES JRNL REF J.STRUCT.BIOL. V. 158 255 2007 JRNL REFN ISSN 1047-8477 JRNL PMID 17188513 JRNL DOI 10.1016/J.JSB.2006.11.002 REMARK 2 REMARK 2 RESOLUTION. 2.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1391292.640 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 14448 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.200 REMARK 3 FREE R VALUE TEST SET COUNT : 314 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.013 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.54 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.70 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2384 REMARK 3 BIN R VALUE (WORKING SET) : 0.2300 REMARK 3 BIN FREE R VALUE : 0.3240 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 1.50 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 37 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.053 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2869 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 135 REMARK 3 SOLVENT ATOMS : 139 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.46000 REMARK 3 B22 (A**2) : 1.30000 REMARK 3 B33 (A**2) : -1.76000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.27 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.28 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.32 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.700 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.030 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.200 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.610 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.300 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.870 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 61.63 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER.PARAM REMARK 3 PARAMETER FILE 4 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 5 : CIS_PEPTIDE.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 5 : CIS_PEPTIDE.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DSV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-JUL-06. REMARK 100 THE DEPOSITION ID IS D_1000025804. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUL-05 REMARK 200 TEMPERATURE (KELVIN) : 298.0 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOMAR REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14762 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.540 REMARK 200 RESOLUTION RANGE LOW (A) : 56.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.12000 REMARK 200 FOR THE DATA SET : 7.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.51000 REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 2DPE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25MM TRIS-HCL, 50MM NACL, 19% ETHANOL, REMARK 280 PH 7.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.38500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.56100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.15500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.56100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.38500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.15500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O4 NAG C 4 O5 NAG C 5 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TRP A 191 CA - CB - CG ANGL. DEV. = 12.8 DEGREES REMARK 500 LEU A 320 CA - CB - CG ANGL. DEV. = 16.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 48 -53.82 -120.12 REMARK 500 THR A 184 49.65 -79.90 REMARK 500 TYR A 185 14.69 -150.35 REMARK 500 ALA A 190 92.64 -48.52 REMARK 500 TRP A 191 96.60 -13.60 REMARK 500 GLN A 193 78.42 -23.72 REMARK 500 THR A 194 168.59 163.61 REMARK 500 SER A 199 51.29 -143.56 REMARK 500 ASP A 207 46.03 35.16 REMARK 500 SER A 209 -26.01 -168.39 REMARK 500 ARG A 212 -17.75 -46.05 REMARK 500 LYS A 268 59.17 39.65 REMARK 500 GLN A 345 94.48 -28.60 REMARK 500 ASN A 346 97.34 -40.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2DPE RELATED DB: PDB REMARK 900 RELATED ID: 2ESC RELATED DB: PDB REMARK 900 RELATED ID: 2DSU RELATED DB: PDB REMARK 900 RELATED ID: 2DSW RELATED DB: PDB DBREF 2DSV A 1 362 UNP Q6TMG6 CH3L1_SHEEP 1 361 SEQRES 1 A 361 TYR LYS LEU ILE CYS TYR TYR THR SER TRP SER GLN TYR SEQRES 2 A 361 ARG GLU GLY ASP GLY SER CYS PHE PRO ASP ALA ILE ASP SEQRES 3 A 361 PRO PHE LEU CYS THR HIS VAL ILE TYR SER PHE ALA ASN SEQRES 4 A 361 ILE SER ASN ASN GLU ILE ASP THR TRP GLU TRP ASN ASP SEQRES 5 A 361 VAL THR LEU TYR ASP THR LEU ASN THR LEU LYS ASN ARG SEQRES 6 A 361 ASN PRO LYS LEU LYS THR LEU LEU SER VAL GLY GLY TRP SEQRES 7 A 361 ASN PHE GLY PRO GLU ARG PHE SER ALA ILE ALA SER LYS SEQRES 8 A 361 THR GLN SER ARG ARG THR PHE ILE LYS SER VAL PRO PRO SEQRES 9 A 361 PHE LEU ARG THR HIS GLY PHE ASP GLY LEU ASP LEU ALA SEQRES 10 A 361 TRP LEU TYR PRO GLY ARG ARG ASP LYS ARG HIS LEU THR SEQRES 11 A 361 THR LEU VAL LYS GLU MET LYS ALA GLU PHE ILE ARG GLU SEQRES 12 A 361 ALA GLN ALA GLY THR GLU GLN LEU LEU LEU SER ALA ALA SEQRES 13 A 361 VAL SER ALA GLY LYS ILE ALA ILE ASP ARG GLY TYR ASP SEQRES 14 A 361 ILE ALA GLN ILE SER ARG HIS LEU ASP PHE ILE SER LEU SEQRES 15 A 361 LEU THR TYR ASP PHE HIS GLY ALA TRP ARG GLN THR VAL SEQRES 16 A 361 GLY HIS HIS SER PRO LEU PHE ALA GLY ASN GLU ASP ALA SEQRES 17 A 361 SER SER ARG PHE SER ASN ALA ASP TYR ALA VAL SER TYR SEQRES 18 A 361 MET LEU ARG LEU GLY ALA PRO ALA ASN LYS LEU VAL MET SEQRES 19 A 361 GLY ILE PRO THR PHE GLY ARG SER PHE THR LEU ALA SER SEQRES 20 A 361 SER LYS THR ASP VAL GLY ALA PRO VAL SER GLY PRO GLY SEQRES 21 A 361 VAL PRO GLY ARG PHE THR LYS GLU LYS GLY ILE LEU ALA SEQRES 22 A 361 TYR TYR GLU ILE CYS ASP PHE LEU HIS GLY ALA THR THR SEQRES 23 A 361 HIS ARG PHE ARG ASP GLN GLN VAL PRO TYR ALA THR LYS SEQRES 24 A 361 GLY ASN GLN TRP VAL ALA TYR ASP ASP GLN GLU SER VAL SEQRES 25 A 361 LYS ASN LYS ALA ARG TYR LEU LYS ASN ARG GLN LEU ALA SEQRES 26 A 361 GLY ALA MET VAL TRP ALA LEU ASP LEU ASP ASP PHE ARG SEQRES 27 A 361 GLY THR PHE CYS GLY GLN ASN LEU THR PHE PRO LEU THR SEQRES 28 A 361 SER ALA VAL LYS ASP VAL LEU ALA GLU VAL MODRES 2DSV ASN A 39 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET MAN B 3 11 HET MAN B 4 11 HET NAG C 1 15 HET NAG C 2 14 HET NAG C 3 14 HET NAG C 4 14 HET NAG C 5 14 HET NAG C 6 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 NAG 8(C8 H15 N O6) FORMUL 2 MAN 2(C6 H12 O6) FORMUL 4 HOH *139(H2 O) HELIX 1 1 TRP A 10 ARG A 14 5 5 HELIX 2 2 GLU A 15 SER A 19 5 5 HELIX 3 3 PHE A 21 ILE A 25 5 5 HELIX 4 4 ASN A 51 ASN A 66 1 16 HELIX 5 5 GLY A 81 SER A 90 1 10 HELIX 6 6 LYS A 91 HIS A 109 1 19 HELIX 7 7 ASP A 125 GLN A 145 1 21 HELIX 8 8 GLY A 160 TYR A 168 1 9 HELIX 9 9 ASP A 169 LEU A 177 1 9 HELIX 10 10 ASN A 215 LEU A 226 1 12 HELIX 11 11 PRO A 229 ASN A 231 5 3 HELIX 12 12 TYR A 275 LEU A 282 1 8 HELIX 13 13 ASP A 309 ARG A 323 1 15 HELIX 14 14 ALA A 332 ASP A 336 5 5 HELIX 15 15 PHE A 349 GLU A 361 1 13 SHEET 1 A10 GLU A 44 ASP A 46 0 SHEET 2 A10 HIS A 32 SER A 41 -1 N SER A 41 O GLU A 44 SHEET 3 A10 LYS A 70 GLY A 76 1 O SER A 74 N ALA A 38 SHEET 4 A10 GLY A 113 ALA A 117 1 O ASP A 115 N VAL A 75 SHEET 5 A10 LEU A 152 VAL A 157 1 O ALA A 156 N LEU A 116 SHEET 6 A10 PHE A 179 LEU A 182 1 O SER A 181 N VAL A 157 SHEET 7 A10 LEU A 233 PRO A 238 1 O VAL A 234 N LEU A 182 SHEET 8 A10 GLY A 327 TRP A 331 1 O MET A 329 N ILE A 237 SHEET 9 A10 LYS A 2 THR A 8 1 N ILE A 4 O ALA A 328 SHEET 10 A10 HIS A 32 SER A 41 1 O ILE A 34 N CYS A 5 SHEET 1 B 3 VAL A 257 PRO A 260 0 SHEET 2 B 3 PHE A 240 LEU A 246 -1 N THR A 245 O GLY A 259 SHEET 3 B 3 ILE A 272 ALA A 274 -1 O LEU A 273 N GLY A 241 SHEET 1 C 5 VAL A 257 PRO A 260 0 SHEET 2 C 5 PHE A 240 LEU A 246 -1 N THR A 245 O GLY A 259 SHEET 3 C 5 GLN A 303 ALA A 306 -1 O ALA A 306 N ARG A 242 SHEET 4 C 5 VAL A 295 LYS A 300 -1 N ALA A 298 O VAL A 305 SHEET 5 C 5 THR A 286 PHE A 290 -1 N HIS A 288 O TYR A 297 SSBOND 1 CYS A 5 CYS A 30 1555 1555 2.04 SSBOND 2 CYS A 279 CYS A 343 1555 1555 2.03 LINK ND2 ASN A 39 C1 NAG B 1 1555 1555 1.45 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.39 LINK O4 NAG B 2 C1 MAN B 3 1555 1555 1.43 LINK O4 MAN B 3 C1 MAN B 4 1555 1555 1.43 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.42 LINK O4 NAG C 2 C1 NAG C 3 1555 1555 1.39 LINK O4 NAG C 3 C1 NAG C 4 1555 1555 1.46 LINK O4 NAG C 4 C1 NAG C 5 1555 1555 1.45 LINK O4 NAG C 5 C1 NAG C 6 1555 1555 1.47 CISPEP 1 SER A 36 PHE A 37 0 -0.43 CISPEP 2 LEU A 119 TYR A 120 0 0.28 CISPEP 3 TRP A 331 ALA A 332 0 -0.84 CRYST1 62.770 66.310 107.122 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015931 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015081 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009335 0.00000 CONECT 43 248 CONECT 248 43 CONECT 322 2871 CONECT 2201 2728 CONECT 2728 2201 CONECT 2871 322 2872 2882 CONECT 2872 2871 2873 2879 CONECT 2873 2872 2874 2880 CONECT 2874 2873 2875 2881 CONECT 2875 2874 2876 2882 CONECT 2876 2875 2883 CONECT 2877 2878 2879 2884 CONECT 2878 2877 CONECT 2879 2872 2877 CONECT 2880 2873 CONECT 2881 2874 2885 CONECT 2882 2871 2875 CONECT 2883 2876 CONECT 2884 2877 CONECT 2885 2881 2886 2896 CONECT 2886 2885 2887 2893 CONECT 2887 2886 2888 2894 CONECT 2888 2887 2889 2895 CONECT 2889 2888 2890 2896 CONECT 2890 2889 2897 CONECT 2891 2892 2893 2898 CONECT 2892 2891 CONECT 2893 2886 2891 CONECT 2894 2887 CONECT 2895 2888 2899 CONECT 2896 2885 2889 CONECT 2897 2890 CONECT 2898 2891 CONECT 2899 2895 2900 2908 CONECT 2900 2899 2901 2905 CONECT 2901 2900 2902 2906 CONECT 2902 2901 2903 2907 CONECT 2903 2902 2904 2908 CONECT 2904 2903 2909 CONECT 2905 2900 CONECT 2906 2901 CONECT 2907 2902 2910 CONECT 2908 2899 2903 CONECT 2909 2904 CONECT 2910 2907 2911 2919 CONECT 2911 2910 2912 2916 CONECT 2912 2911 2913 2917 CONECT 2913 2912 2914 2918 CONECT 2914 2913 2915 2919 CONECT 2915 2914 2920 CONECT 2916 2911 CONECT 2917 2912 CONECT 2918 2913 CONECT 2919 2910 2914 CONECT 2920 2915 CONECT 2921 2922 2930 2933 CONECT 2922 2921 2923 2929 CONECT 2923 2922 2924 2931 CONECT 2924 2923 2925 2932 CONECT 2925 2924 2926 2933 CONECT 2926 2925 2934 CONECT 2927 2928 2929 2935 CONECT 2928 2927 CONECT 2929 2922 2927 CONECT 2930 2921 CONECT 2931 2923 CONECT 2932 2924 2936 CONECT 2933 2921 2925 CONECT 2934 2926 CONECT 2935 2927 CONECT 2936 2932 2937 2947 CONECT 2937 2936 2938 2944 CONECT 2938 2937 2939 2945 CONECT 2939 2938 2940 2946 CONECT 2940 2939 2941 2947 CONECT 2941 2940 2948 CONECT 2942 2943 2944 2949 CONECT 2943 2942 CONECT 2944 2937 2942 CONECT 2945 2938 CONECT 2946 2939 2950 CONECT 2947 2936 2940 CONECT 2948 2941 CONECT 2949 2942 CONECT 2950 2946 2951 2961 CONECT 2951 2950 2952 2958 CONECT 2952 2951 2953 2959 CONECT 2953 2952 2954 2960 CONECT 2954 2953 2955 2961 CONECT 2955 2954 2962 CONECT 2956 2957 2958 2963 CONECT 2957 2956 CONECT 2958 2951 2956 CONECT 2959 2952 CONECT 2960 2953 2964 CONECT 2961 2950 2954 CONECT 2962 2955 CONECT 2963 2956 CONECT 2964 2960 2965 2975 CONECT 2965 2964 2966 2972 CONECT 2966 2965 2967 2973 CONECT 2967 2966 2968 2974 CONECT 2968 2967 2969 2975 CONECT 2969 2968 2976 CONECT 2970 2971 2972 2977 CONECT 2971 2970 CONECT 2972 2965 2970 CONECT 2973 2966 CONECT 2974 2967 2978 CONECT 2975 2964 2968 CONECT 2976 2969 CONECT 2977 2970 CONECT 2978 2974 2979 2989 CONECT 2979 2978 2980 2986 CONECT 2980 2979 2981 2987 CONECT 2981 2980 2982 2988 CONECT 2982 2981 2983 2989 CONECT 2983 2982 2990 CONECT 2984 2985 2986 2991 CONECT 2985 2984 CONECT 2986 2979 2984 CONECT 2987 2980 CONECT 2988 2981 2992 CONECT 2989 2978 2982 CONECT 2990 2983 CONECT 2991 2984 CONECT 2992 2988 2993 3003 CONECT 2993 2992 2994 3000 CONECT 2994 2993 2995 3001 CONECT 2995 2994 2996 3002 CONECT 2996 2995 2997 3003 CONECT 2997 2996 3004 CONECT 2998 2999 3000 3005 CONECT 2999 2998 CONECT 3000 2993 2998 CONECT 3001 2994 CONECT 3002 2995 CONECT 3003 2992 2996 CONECT 3004 2997 CONECT 3005 2998 MASTER 285 0 10 15 18 0 0 6 3143 1 140 28 END