HEADER OXIDOREDUCTASE 19-JUL-06 2DU2 TITLE CRYSTAL STRUCTURE ANALYSIS OF THE L-LACTATE OXIDASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LACTATE OXIDASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 1.13.12.4 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEROCOCCUS VIRIDANS; SOURCE 3 ORGANISM_TAXID: 1377 KEYWDS TIM BARREL, FMN, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.MORIMOTO REVDAT 3 25-OCT-23 2DU2 1 REMARK REVDAT 2 24-FEB-09 2DU2 1 VERSN REVDAT 1 05-DEC-06 2DU2 0 JRNL AUTH Y.UMENA,K.YORITA,T.MATSUOKA,A.KITA,K.FUKUI,Y.MORIMOTO JRNL TITL THE CRYSTAL STRUCTURE OF L-LACTATE OXIDASE FROM AEROCOCCUS JRNL TITL 2 VIRIDANS AT 2.1A RESOLUTION REVEALS THE MECHANISM OF STRICT JRNL TITL 3 SUBSTRATE RECOGNITION JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 350 249 2006 JRNL REFN ISSN 0006-291X JRNL PMID 17007814 JRNL DOI 10.1016/J.BBRC.2006.09.025 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 103006 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5418 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.07 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.12 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7477 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1690 REMARK 3 BIN FREE R VALUE SET COUNT : 397 REMARK 3 BIN FREE R VALUE : 0.2180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11552 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 124 REMARK 3 SOLVENT ATOMS : 1109 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.32000 REMARK 3 B22 (A**2) : 0.32000 REMARK 3 B33 (A**2) : -0.64000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.167 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.148 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.093 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.384 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 11940 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 16200 ; 1.781 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1492 ; 6.865 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 560 ;37.092 ;24.214 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1920 ;16.219 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 76 ;17.615 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1724 ; 0.132 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 9220 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 6422 ; 0.220 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 8269 ; 0.312 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 1163 ; 0.153 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 97 ; 0.188 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 50 ; 0.141 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 7646 ; 1.007 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 11828 ; 1.587 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 5130 ; 2.639 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4372 ; 4.002 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DU2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-JUL-06. REMARK 100 THE DEPOSITION ID IS D_1000025843. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-04; NULL; NULL; NULL REMARK 200 TEMPERATURE (KELVIN) : 100.0; 100.0; 100.0; 100.0 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y; Y; Y REMARK 200 RADIATION SOURCE : SPRING-8; SPRING-8; SPRING-8; REMARK 200 PHOTON FACTORY REMARK 200 BEAMLINE : BL38B1; BL44XU; BL41XU; AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL; NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL; NULL; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.0; 1.0; 1.0; 1.0 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL; NULL; NULL; NULL REMARK 200 OPTICS : NULL; NULL; NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; IMAGE PLATE; CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4; MAC SCIENCE, REMARK 200 DIP6040; MARRESEARCH; ADSC REMARK 200 QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 108566 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.070 REMARK 200 RESOLUTION RANGE LOW (A) : 46.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : 0.14200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.7200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.07 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.43600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL; NULL; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1GOX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18-20%(W/V) PEG 8000, 50MM TRIS BUFFER REMARK 280 PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 95.54800 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 95.54800 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 97.24850 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 95.54800 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 95.54800 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 97.24850 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 95.54800 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 95.54800 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 97.24850 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 95.54800 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 95.54800 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 97.24850 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 95.54800 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 95.54800 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 97.24850 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 95.54800 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 95.54800 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 97.24850 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 95.54800 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 95.54800 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 97.24850 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 95.54800 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 95.54800 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 97.24850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -91.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR B 1191 O GLU B 1207 1.84 REMARK 500 O HOH D 5447 O HOH D 5585 1.88 REMARK 500 O TYR D 3191 O GLU D 3207 1.96 REMARK 500 O HOH A 5468 O HOH A 5764 2.03 REMARK 500 O HOH A 5751 O HOH A 5921 2.05 REMARK 500 O HOH A 5234 O HOH A 5807 2.06 REMARK 500 C ALA C 2095 O HOH C 5650 2.06 REMARK 500 N ALA C 2096 O HOH C 5650 2.13 REMARK 500 OD1 ASN B 1212 O HOH B 5956 2.17 REMARK 500 O GLU B 1072 O HOH B 5748 2.17 REMARK 500 O GLU A 72 O HOH A 5618 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 5545 O HOH A 5873 16444 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ALA C2096 CA ALA C2096 CB 0.147 REMARK 500 ALA D3096 CA ALA D3096 CB 0.150 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ALA A 73 C - N - CA ANGL. DEV. = -19.0 DEGREES REMARK 500 ARG A 141 NE - CZ - NH1 ANGL. DEV. = -8.1 DEGREES REMARK 500 ARG A 141 NE - CZ - NH2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG A 286 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG A 290 NE - CZ - NH1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG A 290 NE - CZ - NH2 ANGL. DEV. = -7.5 DEGREES REMARK 500 GLY A 371 C - N - CA ANGL. DEV. = -21.5 DEGREES REMARK 500 ASP B1070 C - N - CA ANGL. DEV. = -21.1 DEGREES REMARK 500 LYS B1104 CD - CE - NZ ANGL. DEV. = 15.4 DEGREES REMARK 500 ARG B1141 NE - CZ - NH1 ANGL. DEV. = -4.2 DEGREES REMARK 500 ARG B1141 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 ILE B1145 CB - CA - C ANGL. DEV. = -13.8 DEGREES REMARK 500 ARG B1200 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG B1200 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 GLY B1216 C - N - CA ANGL. DEV. = -17.5 DEGREES REMARK 500 ARG B1286 CG - CD - NE ANGL. DEV. = -13.2 DEGREES REMARK 500 ARG B1286 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG B1286 NE - CZ - NH2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ARG B1290 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG B1290 NE - CZ - NH2 ANGL. DEV. = -5.7 DEGREES REMARK 500 GLY B1371 C - N - CA ANGL. DEV. = -20.4 DEGREES REMARK 500 ASP C2070 C - N - CA ANGL. DEV. = -22.0 DEGREES REMARK 500 ARG C2141 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ILE C2145 CB - CA - C ANGL. DEV. = -13.8 DEGREES REMARK 500 ARG C2286 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG C2286 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG C2290 NE - CZ - NH1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG C2290 NE - CZ - NH2 ANGL. DEV. = -7.4 DEGREES REMARK 500 GLY C2371 C - N - CA ANGL. DEV. = -19.0 DEGREES REMARK 500 ALA D3073 C - N - CA ANGL. DEV. = -15.7 DEGREES REMARK 500 ARG D3141 NE - CZ - NH1 ANGL. DEV. = -5.3 DEGREES REMARK 500 ARG D3141 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 ILE D3145 CB - CA - C ANGL. DEV. = -14.4 DEGREES REMARK 500 GLY D3235 C - N - CA ANGL. DEV. = -14.0 DEGREES REMARK 500 ARG D3286 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG D3286 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ARG D3290 NE - CZ - NH1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG D3290 NE - CZ - NH2 ANGL. DEV. = -7.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 72 -63.31 -135.50 REMARK 500 PRO A 88 49.41 -81.46 REMARK 500 LYS A 104 -144.47 55.23 REMARK 500 ARG A 200 -29.14 111.91 REMARK 500 TYR A 215 -72.54 99.68 REMARK 500 LYS A 221 47.48 -86.23 REMARK 500 GLN A 269 -118.96 -112.41 REMARK 500 LYS A 289 -1.57 71.05 REMARK 500 SER A 297 86.35 106.59 REMARK 500 GLU B1007 5.09 -164.95 REMARK 500 ASN B1009 71.92 -107.49 REMARK 500 VAL B1019 95.14 45.03 REMARK 500 ASP B1070 66.25 -111.95 REMARK 500 GLU B1072 -53.64 -134.79 REMARK 500 PRO B1088 49.49 -81.25 REMARK 500 LYS B1104 -144.40 46.14 REMARK 500 ALA B1206 -26.25 31.91 REMARK 500 GLN B1269 -117.91 -109.99 REMARK 500 SER B1297 81.64 104.60 REMARK 500 ASN C2004 -61.04 -105.06 REMARK 500 ASP C2005 121.49 -20.08 REMARK 500 GLU C2007 82.11 -168.42 REMARK 500 ASP C2070 68.92 -119.28 REMARK 500 GLU C2072 -59.21 -137.22 REMARK 500 LYS C2104 -153.50 65.91 REMARK 500 HIS C2265 36.74 71.99 REMARK 500 GLN C2269 -115.06 -113.42 REMARK 500 SER C2297 86.81 105.87 REMARK 500 ASN D3002 -86.56 -138.36 REMARK 500 ASN D3004 -62.08 -104.23 REMARK 500 ILE D3006 -108.48 -129.05 REMARK 500 GLU D3072 -48.06 -135.47 REMARK 500 PRO D3088 49.26 -80.77 REMARK 500 LYS D3104 -149.85 58.25 REMARK 500 ARG D3200 -18.01 -49.76 REMARK 500 LYS D3221 49.23 -89.46 REMARK 500 GLN D3269 -114.97 -115.97 REMARK 500 LYS D3289 -1.85 74.85 REMARK 500 SER D3297 84.07 102.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 235 LEU A 236 -141.71 REMARK 500 GLY B 1216 ALA B 1217 143.68 REMARK 500 ALA C 2096 HIS C 2097 -117.84 REMARK 500 GLY C 2235 LEU C 2236 -140.34 REMARK 500 ALA D 3096 HIS D 3097 -117.61 REMARK 500 GLY D 3235 LEU D 3236 -146.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN A 512 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN B 1512 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN C 2512 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN D 3512 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1GOX RELATED DB: PDB REMARK 900 GLYCOLATE OXIDASE DBREF 2DU2 A 1 374 UNP Q44467 Q44467_9LACT 1 374 DBREF 2DU2 B 1001 1374 UNP Q44467 Q44467_9LACT 1 374 DBREF 2DU2 C 2001 2374 UNP Q44467 Q44467_9LACT 1 374 DBREF 2DU2 D 3001 3374 UNP Q44467 Q44467_9LACT 1 374 SEQRES 1 A 374 MET ASN ASN ASN ASP ILE GLU TYR ASN ALA PRO SER GLU SEQRES 2 A 374 ILE LYS TYR ILE ASP VAL VAL ASN THR TYR ASP LEU GLU SEQRES 3 A 374 GLU GLU ALA SER LYS VAL VAL PRO HIS GLY GLY PHE ASN SEQRES 4 A 374 TYR ILE ALA GLY ALA SER GLY ASP GLU TRP THR LYS ARG SEQRES 5 A 374 ALA ASN ASP ARG ALA TRP LYS HIS LYS LEU LEU TYR PRO SEQRES 6 A 374 ARG LEU ALA GLN ASP VAL GLU ALA PRO ASP THR SER THR SEQRES 7 A 374 GLU ILE LEU GLY HIS LYS ILE LYS ALA PRO PHE ILE MET SEQRES 8 A 374 ALA PRO ILE ALA ALA HIS GLY LEU ALA HIS THR THR LYS SEQRES 9 A 374 GLU ALA GLY THR ALA ARG ALA VAL SER GLU PHE GLY THR SEQRES 10 A 374 ILE MET SER ILE SER ALA TYR SER GLY ALA THR PHE GLU SEQRES 11 A 374 GLU ILE SER GLU GLY LEU ASN GLY GLY PRO ARG TRP PHE SEQRES 12 A 374 GLN ILE TYR MET ALA LYS ASP ASP GLN GLN ASN ARG ASP SEQRES 13 A 374 ILE LEU ASP GLU ALA LYS SER ASP GLY ALA THR ALA ILE SEQRES 14 A 374 ILE LEU THR ALA ASP SER THR VAL SER GLY ASN ARG ASP SEQRES 15 A 374 ARG ASP VAL LYS ASN LYS PHE VAL TYR PRO PHE GLY MET SEQRES 16 A 374 PRO ILE VAL GLN ARG TYR LEU ARG GLY THR ALA GLU GLY SEQRES 17 A 374 MET SER LEU ASN ASN ILE TYR GLY ALA SER LYS GLN LYS SEQRES 18 A 374 ILE SER PRO ARG ASP ILE GLU GLU ILE ALA GLY HIS SER SEQRES 19 A 374 GLY LEU PRO VAL PHE VAL LYS GLY ILE GLN HIS PRO GLU SEQRES 20 A 374 ASP ALA ASP MET ALA ILE LYS ARG GLY ALA SER GLY ILE SEQRES 21 A 374 TRP VAL SER ASN HIS GLY ALA ARG GLN LEU TYR GLU ALA SEQRES 22 A 374 PRO GLY SER PHE ASP THR LEU PRO ALA ILE ALA GLU ARG SEQRES 23 A 374 VAL ASN LYS ARG VAL PRO ILE VAL PHE ASP SER GLY VAL SEQRES 24 A 374 ARG ARG GLY GLU HIS VAL ALA LYS ALA LEU ALA SER GLY SEQRES 25 A 374 ALA ASP VAL VAL ALA LEU GLY ARG PRO VAL LEU PHE GLY SEQRES 26 A 374 LEU ALA LEU GLY GLY TRP GLN GLY ALA TYR SER VAL LEU SEQRES 27 A 374 ASP TYR PHE GLN LYS ASP LEU THR ARG VAL MET GLN LEU SEQRES 28 A 374 THR GLY SER GLN ASN VAL GLU ASP LEU LYS GLY LEU ASP SEQRES 29 A 374 LEU PHE ASP ASN PRO TYR GLY TYR GLU TYR SEQRES 1 B 374 MET ASN ASN ASN ASP ILE GLU TYR ASN ALA PRO SER GLU SEQRES 2 B 374 ILE LYS TYR ILE ASP VAL VAL ASN THR TYR ASP LEU GLU SEQRES 3 B 374 GLU GLU ALA SER LYS VAL VAL PRO HIS GLY GLY PHE ASN SEQRES 4 B 374 TYR ILE ALA GLY ALA SER GLY ASP GLU TRP THR LYS ARG SEQRES 5 B 374 ALA ASN ASP ARG ALA TRP LYS HIS LYS LEU LEU TYR PRO SEQRES 6 B 374 ARG LEU ALA GLN ASP VAL GLU ALA PRO ASP THR SER THR SEQRES 7 B 374 GLU ILE LEU GLY HIS LYS ILE LYS ALA PRO PHE ILE MET SEQRES 8 B 374 ALA PRO ILE ALA ALA HIS GLY LEU ALA HIS THR THR LYS SEQRES 9 B 374 GLU ALA GLY THR ALA ARG ALA VAL SER GLU PHE GLY THR SEQRES 10 B 374 ILE MET SER ILE SER ALA TYR SER GLY ALA THR PHE GLU SEQRES 11 B 374 GLU ILE SER GLU GLY LEU ASN GLY GLY PRO ARG TRP PHE SEQRES 12 B 374 GLN ILE TYR MET ALA LYS ASP ASP GLN GLN ASN ARG ASP SEQRES 13 B 374 ILE LEU ASP GLU ALA LYS SER ASP GLY ALA THR ALA ILE SEQRES 14 B 374 ILE LEU THR ALA ASP SER THR VAL SER GLY ASN ARG ASP SEQRES 15 B 374 ARG ASP VAL LYS ASN LYS PHE VAL TYR PRO PHE GLY MET SEQRES 16 B 374 PRO ILE VAL GLN ARG TYR LEU ARG GLY THR ALA GLU GLY SEQRES 17 B 374 MET SER LEU ASN ASN ILE TYR GLY ALA SER LYS GLN LYS SEQRES 18 B 374 ILE SER PRO ARG ASP ILE GLU GLU ILE ALA GLY HIS SER SEQRES 19 B 374 GLY LEU PRO VAL PHE VAL LYS GLY ILE GLN HIS PRO GLU SEQRES 20 B 374 ASP ALA ASP MET ALA ILE LYS ARG GLY ALA SER GLY ILE SEQRES 21 B 374 TRP VAL SER ASN HIS GLY ALA ARG GLN LEU TYR GLU ALA SEQRES 22 B 374 PRO GLY SER PHE ASP THR LEU PRO ALA ILE ALA GLU ARG SEQRES 23 B 374 VAL ASN LYS ARG VAL PRO ILE VAL PHE ASP SER GLY VAL SEQRES 24 B 374 ARG ARG GLY GLU HIS VAL ALA LYS ALA LEU ALA SER GLY SEQRES 25 B 374 ALA ASP VAL VAL ALA LEU GLY ARG PRO VAL LEU PHE GLY SEQRES 26 B 374 LEU ALA LEU GLY GLY TRP GLN GLY ALA TYR SER VAL LEU SEQRES 27 B 374 ASP TYR PHE GLN LYS ASP LEU THR ARG VAL MET GLN LEU SEQRES 28 B 374 THR GLY SER GLN ASN VAL GLU ASP LEU LYS GLY LEU ASP SEQRES 29 B 374 LEU PHE ASP ASN PRO TYR GLY TYR GLU TYR SEQRES 1 C 374 MET ASN ASN ASN ASP ILE GLU TYR ASN ALA PRO SER GLU SEQRES 2 C 374 ILE LYS TYR ILE ASP VAL VAL ASN THR TYR ASP LEU GLU SEQRES 3 C 374 GLU GLU ALA SER LYS VAL VAL PRO HIS GLY GLY PHE ASN SEQRES 4 C 374 TYR ILE ALA GLY ALA SER GLY ASP GLU TRP THR LYS ARG SEQRES 5 C 374 ALA ASN ASP ARG ALA TRP LYS HIS LYS LEU LEU TYR PRO SEQRES 6 C 374 ARG LEU ALA GLN ASP VAL GLU ALA PRO ASP THR SER THR SEQRES 7 C 374 GLU ILE LEU GLY HIS LYS ILE LYS ALA PRO PHE ILE MET SEQRES 8 C 374 ALA PRO ILE ALA ALA HIS GLY LEU ALA HIS THR THR LYS SEQRES 9 C 374 GLU ALA GLY THR ALA ARG ALA VAL SER GLU PHE GLY THR SEQRES 10 C 374 ILE MET SER ILE SER ALA TYR SER GLY ALA THR PHE GLU SEQRES 11 C 374 GLU ILE SER GLU GLY LEU ASN GLY GLY PRO ARG TRP PHE SEQRES 12 C 374 GLN ILE TYR MET ALA LYS ASP ASP GLN GLN ASN ARG ASP SEQRES 13 C 374 ILE LEU ASP GLU ALA LYS SER ASP GLY ALA THR ALA ILE SEQRES 14 C 374 ILE LEU THR ALA ASP SER THR VAL SER GLY ASN ARG ASP SEQRES 15 C 374 ARG ASP VAL LYS ASN LYS PHE VAL TYR PRO PHE GLY MET SEQRES 16 C 374 PRO ILE VAL GLN ARG TYR LEU ARG GLY THR ALA GLU GLY SEQRES 17 C 374 MET SER LEU ASN ASN ILE TYR GLY ALA SER LYS GLN LYS SEQRES 18 C 374 ILE SER PRO ARG ASP ILE GLU GLU ILE ALA GLY HIS SER SEQRES 19 C 374 GLY LEU PRO VAL PHE VAL LYS GLY ILE GLN HIS PRO GLU SEQRES 20 C 374 ASP ALA ASP MET ALA ILE LYS ARG GLY ALA SER GLY ILE SEQRES 21 C 374 TRP VAL SER ASN HIS GLY ALA ARG GLN LEU TYR GLU ALA SEQRES 22 C 374 PRO GLY SER PHE ASP THR LEU PRO ALA ILE ALA GLU ARG SEQRES 23 C 374 VAL ASN LYS ARG VAL PRO ILE VAL PHE ASP SER GLY VAL SEQRES 24 C 374 ARG ARG GLY GLU HIS VAL ALA LYS ALA LEU ALA SER GLY SEQRES 25 C 374 ALA ASP VAL VAL ALA LEU GLY ARG PRO VAL LEU PHE GLY SEQRES 26 C 374 LEU ALA LEU GLY GLY TRP GLN GLY ALA TYR SER VAL LEU SEQRES 27 C 374 ASP TYR PHE GLN LYS ASP LEU THR ARG VAL MET GLN LEU SEQRES 28 C 374 THR GLY SER GLN ASN VAL GLU ASP LEU LYS GLY LEU ASP SEQRES 29 C 374 LEU PHE ASP ASN PRO TYR GLY TYR GLU TYR SEQRES 1 D 374 MET ASN ASN ASN ASP ILE GLU TYR ASN ALA PRO SER GLU SEQRES 2 D 374 ILE LYS TYR ILE ASP VAL VAL ASN THR TYR ASP LEU GLU SEQRES 3 D 374 GLU GLU ALA SER LYS VAL VAL PRO HIS GLY GLY PHE ASN SEQRES 4 D 374 TYR ILE ALA GLY ALA SER GLY ASP GLU TRP THR LYS ARG SEQRES 5 D 374 ALA ASN ASP ARG ALA TRP LYS HIS LYS LEU LEU TYR PRO SEQRES 6 D 374 ARG LEU ALA GLN ASP VAL GLU ALA PRO ASP THR SER THR SEQRES 7 D 374 GLU ILE LEU GLY HIS LYS ILE LYS ALA PRO PHE ILE MET SEQRES 8 D 374 ALA PRO ILE ALA ALA HIS GLY LEU ALA HIS THR THR LYS SEQRES 9 D 374 GLU ALA GLY THR ALA ARG ALA VAL SER GLU PHE GLY THR SEQRES 10 D 374 ILE MET SER ILE SER ALA TYR SER GLY ALA THR PHE GLU SEQRES 11 D 374 GLU ILE SER GLU GLY LEU ASN GLY GLY PRO ARG TRP PHE SEQRES 12 D 374 GLN ILE TYR MET ALA LYS ASP ASP GLN GLN ASN ARG ASP SEQRES 13 D 374 ILE LEU ASP GLU ALA LYS SER ASP GLY ALA THR ALA ILE SEQRES 14 D 374 ILE LEU THR ALA ASP SER THR VAL SER GLY ASN ARG ASP SEQRES 15 D 374 ARG ASP VAL LYS ASN LYS PHE VAL TYR PRO PHE GLY MET SEQRES 16 D 374 PRO ILE VAL GLN ARG TYR LEU ARG GLY THR ALA GLU GLY SEQRES 17 D 374 MET SER LEU ASN ASN ILE TYR GLY ALA SER LYS GLN LYS SEQRES 18 D 374 ILE SER PRO ARG ASP ILE GLU GLU ILE ALA GLY HIS SER SEQRES 19 D 374 GLY LEU PRO VAL PHE VAL LYS GLY ILE GLN HIS PRO GLU SEQRES 20 D 374 ASP ALA ASP MET ALA ILE LYS ARG GLY ALA SER GLY ILE SEQRES 21 D 374 TRP VAL SER ASN HIS GLY ALA ARG GLN LEU TYR GLU ALA SEQRES 22 D 374 PRO GLY SER PHE ASP THR LEU PRO ALA ILE ALA GLU ARG SEQRES 23 D 374 VAL ASN LYS ARG VAL PRO ILE VAL PHE ASP SER GLY VAL SEQRES 24 D 374 ARG ARG GLY GLU HIS VAL ALA LYS ALA LEU ALA SER GLY SEQRES 25 D 374 ALA ASP VAL VAL ALA LEU GLY ARG PRO VAL LEU PHE GLY SEQRES 26 D 374 LEU ALA LEU GLY GLY TRP GLN GLY ALA TYR SER VAL LEU SEQRES 27 D 374 ASP TYR PHE GLN LYS ASP LEU THR ARG VAL MET GLN LEU SEQRES 28 D 374 THR GLY SER GLN ASN VAL GLU ASP LEU LYS GLY LEU ASP SEQRES 29 D 374 LEU PHE ASP ASN PRO TYR GLY TYR GLU TYR HET FMN A 512 31 HET FMN B1512 31 HET FMN C2512 31 HET FMN D3512 31 HETNAM FMN FLAVIN MONONUCLEOTIDE HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 5 FMN 4(C17 H21 N4 O9 P) FORMUL 9 HOH *1109(H2 O) HELIX 1 1 THR A 22 LYS A 31 1 10 HELIX 2 2 PRO A 34 GLY A 43 1 10 HELIX 3 3 GLU A 48 ALA A 57 1 10 HELIX 4 4 ALA A 96 ALA A 100 5 5 HELIX 5 5 THR A 103 GLY A 116 1 14 HELIX 6 6 THR A 128 ASN A 137 1 10 HELIX 7 7 ASP A 150 ASP A 164 1 15 HELIX 8 8 ARG A 181 ASN A 187 1 7 HELIX 9 9 ARG A 203 GLU A 207 5 5 HELIX 10 10 SER A 223 SER A 234 1 12 HELIX 11 11 HIS A 245 ARG A 255 1 11 HELIX 12 12 ASN A 264 ARG A 268 5 5 HELIX 13 13 GLY A 275 ASN A 288 1 14 HELIX 14 14 ARG A 301 SER A 311 1 11 HELIX 15 15 GLY A 319 GLY A 353 1 35 HELIX 16 16 ASN A 356 GLY A 362 1 7 HELIX 17 17 ASP B 1024 LYS B 1031 1 8 HELIX 18 18 PRO B 1034 GLY B 1043 1 10 HELIX 19 19 GLU B 1048 ALA B 1057 1 10 HELIX 20 20 ALA B 1096 ALA B 1100 5 5 HELIX 21 21 THR B 1103 GLY B 1116 1 14 HELIX 22 22 THR B 1128 ASN B 1137 1 10 HELIX 23 23 ASP B 1150 GLY B 1165 1 16 HELIX 24 24 ARG B 1181 LYS B 1188 1 8 HELIX 25 25 VAL B 1198 LEU B 1202 5 5 HELIX 26 26 SER B 1210 TYR B 1215 1 6 HELIX 27 27 SER B 1223 SER B 1234 1 12 HELIX 28 28 HIS B 1245 ARG B 1255 1 11 HELIX 29 29 ASN B 1264 ARG B 1268 5 5 HELIX 30 30 GLY B 1275 ASN B 1288 1 14 HELIX 31 31 ARG B 1301 SER B 1311 1 11 HELIX 32 32 GLY B 1319 GLY B 1330 1 12 HELIX 33 33 GLY B 1330 GLY B 1353 1 24 HELIX 34 34 ASN B 1356 GLY B 1362 1 7 HELIX 35 35 TYR C 2023 LYS C 2031 1 9 HELIX 36 36 PRO C 2034 GLY C 2043 1 10 HELIX 37 37 GLU C 2048 ALA C 2057 1 10 HELIX 38 38 ALA C 2096 ALA C 2100 5 5 HELIX 39 39 THR C 2103 GLY C 2116 1 14 HELIX 40 40 THR C 2128 ASN C 2137 1 10 HELIX 41 41 ASP C 2150 GLY C 2165 1 16 HELIX 42 42 ARG C 2181 LYS C 2188 1 8 HELIX 43 43 VAL C 2198 ARG C 2203 1 6 HELIX 44 44 SER C 2210 SER C 2218 1 9 HELIX 45 45 SER C 2223 SER C 2234 1 12 HELIX 46 46 HIS C 2245 ARG C 2255 1 11 HELIX 47 47 ASN C 2264 ARG C 2268 5 5 HELIX 48 48 GLY C 2275 ASN C 2288 1 14 HELIX 49 49 ARG C 2301 SER C 2311 1 11 HELIX 50 50 GLY C 2319 GLY C 2353 1 35 HELIX 51 51 ASN C 2356 GLY C 2362 1 7 HELIX 52 52 TYR D 3023 LYS D 3031 1 9 HELIX 53 53 PRO D 3034 GLY D 3043 1 10 HELIX 54 54 GLU D 3048 ALA D 3057 1 10 HELIX 55 55 ALA D 3096 ALA D 3100 5 5 HELIX 56 56 THR D 3103 GLY D 3116 1 14 HELIX 57 57 THR D 3128 ASN D 3137 1 10 HELIX 58 58 ASP D 3150 GLY D 3165 1 16 HELIX 59 59 ARG D 3181 LYS D 3188 1 8 HELIX 60 60 VAL D 3198 LEU D 3202 5 5 HELIX 61 61 SER D 3210 SER D 3218 1 9 HELIX 62 62 SER D 3223 SER D 3234 1 12 HELIX 63 63 HIS D 3245 ARG D 3255 1 11 HELIX 64 64 ASN D 3264 ARG D 3268 5 5 HELIX 65 65 GLY D 3275 ASN D 3288 1 14 HELIX 66 66 ARG D 3301 SER D 3311 1 11 HELIX 67 67 GLY D 3319 GLY D 3353 1 35 HELIX 68 68 ASN D 3356 GLY D 3362 1 7 SHEET 1 A 2 LYS A 61 LEU A 63 0 SHEET 2 A 2 LEU A 365 ASP A 367 -1 O PHE A 366 N LEU A 62 SHEET 1 B 2 THR A 78 ILE A 80 0 SHEET 2 B 2 HIS A 83 ILE A 85 -1 O ILE A 85 N THR A 78 SHEET 1 C 9 PHE A 89 MET A 91 0 SHEET 2 C 9 MET A 119 SER A 122 1 O SER A 120 N MET A 91 SHEET 3 C 9 ARG A 141 ILE A 145 1 O TRP A 142 N ILE A 121 SHEET 4 C 9 ILE A 169 THR A 172 1 O ILE A 170 N ILE A 145 SHEET 5 C 9 VAL A 238 ILE A 243 1 O PHE A 239 N LEU A 171 SHEET 6 C 9 GLY A 259 VAL A 262 1 O TRP A 261 N VAL A 240 SHEET 7 C 9 ILE A 293 PHE A 295 1 O VAL A 294 N VAL A 262 SHEET 8 C 9 VAL A 315 LEU A 318 1 O ALA A 317 N PHE A 295 SHEET 9 C 9 PHE A 89 MET A 91 1 N ILE A 90 O LEU A 318 SHEET 1 D 2 LYS B1061 LEU B1062 0 SHEET 2 D 2 PHE B1366 ASP B1367 -1 O PHE B1366 N LEU B1062 SHEET 1 E 2 THR B1078 ILE B1080 0 SHEET 2 E 2 HIS B1083 ILE B1085 -1 O ILE B1085 N THR B1078 SHEET 1 F 8 PHE B1089 MET B1091 0 SHEET 2 F 8 VAL B1315 LEU B1318 1 O LEU B1318 N ILE B1090 SHEET 3 F 8 ILE B1293 PHE B1295 1 N PHE B1295 O ALA B1317 SHEET 4 F 8 GLY B1259 VAL B1262 1 N ILE B1260 O VAL B1294 SHEET 5 F 8 VAL B1238 ILE B1243 1 N VAL B1240 O TRP B1261 SHEET 6 F 8 ILE B1169 THR B1172 1 N LEU B1171 O PHE B1239 SHEET 7 F 8 ARG B1141 ILE B1145 1 N PHE B1143 O ILE B1170 SHEET 8 F 8 MET B1119 SER B1122 1 N ILE B1121 O GLN B1144 SHEET 1 G 2 LYS C2061 LEU C2062 0 SHEET 2 G 2 PHE C2366 ASP C2367 -1 O PHE C2366 N LEU C2062 SHEET 1 H 2 THR C2078 ILE C2080 0 SHEET 2 H 2 HIS C2083 ILE C2085 -1 O ILE C2085 N THR C2078 SHEET 1 I 8 PHE C2089 MET C2091 0 SHEET 2 I 8 VAL C2315 LEU C2318 1 O LEU C2318 N ILE C2090 SHEET 3 I 8 ILE C2293 PHE C2295 1 N PHE C2295 O ALA C2317 SHEET 4 I 8 GLY C2259 VAL C2262 1 N VAL C2262 O VAL C2294 SHEET 5 I 8 VAL C2238 ILE C2243 1 N VAL C2240 O TRP C2261 SHEET 6 I 8 ALA C2166 THR C2172 1 N LEU C2171 O LYS C2241 SHEET 7 I 8 ARG C2141 ILE C2145 1 N PHE C2143 O ILE C2170 SHEET 8 I 8 MET C2119 SER C2122 1 N ILE C2121 O GLN C2144 SHEET 1 J 2 LYS D3061 LEU D3063 0 SHEET 2 J 2 LEU D3365 ASP D3367 -1 O PHE D3366 N LEU D3062 SHEET 1 K 2 THR D3078 ILE D3080 0 SHEET 2 K 2 HIS D3083 ILE D3085 -1 O ILE D3085 N THR D3078 SHEET 1 L 8 PHE D3089 MET D3091 0 SHEET 2 L 8 VAL D3315 LEU D3318 1 O LEU D3318 N ILE D3090 SHEET 3 L 8 ILE D3293 PHE D3295 1 N PHE D3295 O VAL D3315 SHEET 4 L 8 GLY D3259 VAL D3262 1 N VAL D3262 O VAL D3294 SHEET 5 L 8 VAL D3238 ILE D3243 1 N VAL D3240 O TRP D3261 SHEET 6 L 8 ILE D3169 THR D3172 1 N LEU D3171 O PHE D3239 SHEET 7 L 8 ARG D3141 ILE D3145 1 N PHE D3143 O ILE D3170 SHEET 8 L 8 MET D3119 SER D3122 1 N ILE D3121 O GLN D3144 SITE 1 AC1 25 ILE A 41 ALA A 92 PRO A 93 ILE A 94 SITE 2 AC1 25 ALA A 95 SER A 122 GLN A 144 TYR A 146 SITE 3 AC1 25 THR A 172 LYS A 241 SER A 263 HIS A 265 SITE 4 AC1 25 GLY A 266 ARG A 268 ASP A 296 SER A 297 SITE 5 AC1 25 GLY A 298 ARG A 300 GLY A 319 ARG A 320 SITE 6 AC1 25 HOH A5001 HOH A5015 HOH A5123 HOH A5624 SITE 7 AC1 25 HOH A5716 SITE 1 AC2 22 ALA B1092 PRO B1093 ILE B1094 ALA B1095 SITE 2 AC2 22 SER B1122 GLN B1144 TYR B1146 THR B1172 SITE 3 AC2 22 LYS B1241 SER B1263 HIS B1265 GLY B1266 SITE 4 AC2 22 ARG B1268 ASP B1296 SER B1297 GLY B1298 SITE 5 AC2 22 ARG B1300 GLY B1319 ARG B1320 HOH B5003 SITE 6 AC2 22 HOH B5030 HOH B5074 SITE 1 AC3 22 ALA C2092 PRO C2093 ILE C2094 ALA C2095 SITE 2 AC3 22 SER C2122 GLN C2144 TYR C2146 THR C2172 SITE 3 AC3 22 LYS C2241 SER C2263 HIS C2265 GLY C2266 SITE 4 AC3 22 ARG C2268 ASP C2296 SER C2297 GLY C2298 SITE 5 AC3 22 ARG C2300 GLY C2319 ARG C2320 HOH C5016 SITE 6 AC3 22 HOH C5018 HOH C5060 SITE 1 AC4 22 ALA D3092 PRO D3093 ILE D3094 ALA D3095 SITE 2 AC4 22 SER D3122 GLN D3144 TYR D3146 THR D3172 SITE 3 AC4 22 LYS D3241 SER D3263 HIS D3265 GLY D3266 SITE 4 AC4 22 ARG D3268 ASP D3296 SER D3297 GLY D3298 SITE 5 AC4 22 ARG D3300 GLY D3319 ARG D3320 HOH D5013 SITE 6 AC4 22 HOH D5090 HOH D5143 CRYST1 191.096 191.096 194.497 90.00 90.00 90.00 I 4 2 2 64 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005233 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005233 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005141 0.00000