HEADER OXIDOREDUCTASE 28-JUL-06 2DV1 OBSLTE 07-SEP-16 2DV1 5SX1 TITLE CRYSTAL STRUCTURE OF D141E MUTANT OF BPKATG COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEROXIDASE/CATALASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CATALASE-PEROXIDASE, BPKATG; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI; SOURCE 3 ORGANISM_TAXID: 28450; SOURCE 4 GENE: KATG; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS KATG, CATALASE-PEROXIDASE, COMPOUND I, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR T.DEEMAGARN,B.WISEMAN,X.CARPENA,A.IVANCICH,I.FITA,P.C.LOEWEN REVDAT 5 07-SEP-16 2DV1 1 OBSLTE REVDAT 4 13-JUL-11 2DV1 1 VERSN REVDAT 3 24-FEB-09 2DV1 1 VERSN REVDAT 2 19-DEC-06 2DV1 1 JRNL REVDAT 1 07-NOV-06 2DV1 0 JRNL AUTH T.DEEMAGARN,B.WISEMAN,X.CARPENA,A.IVANCICH,I.FITA,P.C.LOEWEN JRNL TITL TWO ALTERNATIVE SUBSTRATE PATHS FOR COMPOUND I FORMATION AND JRNL TITL 2 REDUCTION IN CATALASE-PEROXIDASE KATG FROM BURKHOLDERIA JRNL TITL 3 PSEUDOMALLEI JRNL REF PROTEINS V. 66 219 2006 JRNL REFN ISSN 0887-3585 JRNL PMID 17063492 JRNL DOI 10.1002/PROT.21209 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.20 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 178806 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 9433 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 12325 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.75 REMARK 3 BIN R VALUE (WORKING SET) : 0.2430 REMARK 3 BIN FREE R VALUE SET COUNT : 683 REMARK 3 BIN FREE R VALUE : 0.2760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11020 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 106 REMARK 3 SOLVENT ATOMS : 1376 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.06000 REMARK 3 B22 (A**2) : 0.34000 REMARK 3 B33 (A**2) : -0.40000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.098 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.096 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.067 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.998 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 11446 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 7693 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 15584 ; 1.397 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): 18584 ; 1.006 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1426 ; 5.483 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 541 ;35.624 ;23.641 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1747 ;12.835 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 88 ;15.224 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1631 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 13032 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2425 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2319 ; 0.213 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 8068 ; 0.200 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 5636 ; 0.176 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 5420 ; 0.096 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 1019 ; 0.145 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 4 ; 0.054 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 8 ; 0.161 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 33 ; 0.244 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.076 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 7080 ; 0.807 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2914 ; 0.220 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 11251 ; 1.441 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4634 ; 2.203 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4333 ; 3.545 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 35 A 748 6 REMARK 3 1 B 35 B 748 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 9336 ; 0.35 ; 5.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 9336 ; 2.35 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 35 A 748 REMARK 3 ORIGIN FOR THE GROUP (A): -24.1970 -62.4530 -21.1550 REMARK 3 T TENSOR REMARK 3 T11: -0.0413 T22: -0.0456 REMARK 3 T33: -0.0168 T12: 0.0090 REMARK 3 T13: -0.0030 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 0.1263 L22: 0.2845 REMARK 3 L33: 0.4388 L12: -0.0180 REMARK 3 L13: -0.0512 L23: 0.1120 REMARK 3 S TENSOR REMARK 3 S11: 0.0067 S12: 0.0052 S13: -0.0507 REMARK 3 S21: -0.0101 S22: -0.0061 S23: -0.0290 REMARK 3 S31: 0.0691 S32: 0.0412 S33: -0.0005 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 35 B 748 REMARK 3 ORIGIN FOR THE GROUP (A): -9.4550 -33.7190 5.6630 REMARK 3 T TENSOR REMARK 3 T11: -0.0384 T22: -0.0408 REMARK 3 T33: -0.0164 T12: -0.0088 REMARK 3 T13: -0.0044 T23: -0.0126 REMARK 3 L TENSOR REMARK 3 L11: 0.2251 L22: 0.1851 REMARK 3 L33: 0.2872 L12: -0.0008 REMARK 3 L13: 0.0331 L23: -0.0684 REMARK 3 S TENSOR REMARK 3 S11: -0.0265 S12: -0.0277 S13: 0.0069 REMARK 3 S21: 0.0109 S22: 0.0162 S23: -0.0513 REMARK 3 S31: -0.0046 S32: 0.0549 S33: 0.0103 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2DV1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-AUG-06. REMARK 100 THE RCSB ID CODE IS RCSB025877. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 188800 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10800 REMARK 200 FOR THE DATA SET : 9.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.43300 REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1MWV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16-20% PEG 4000, 20% MPD, 0.1M REMARK 280 NACITRATE, PH 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 50.36950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.50900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.09900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 87.50900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 50.36950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 58.09900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 50630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -115.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 GLY A 3 REMARK 465 SER A 4 REMARK 465 ASP A 5 REMARK 465 ALA A 6 REMARK 465 GLY A 7 REMARK 465 PRO A 8 REMARK 465 ARG A 9 REMARK 465 ARG A 10 REMARK 465 ARG A 11 REMARK 465 GLY A 12 REMARK 465 VAL A 13 REMARK 465 HIS A 14 REMARK 465 GLU A 15 REMARK 465 GLN A 16 REMARK 465 ARG A 17 REMARK 465 ARG A 18 REMARK 465 ASN A 19 REMARK 465 ARG A 20 REMARK 465 MET A 21 REMARK 465 SER A 22 REMARK 465 ASN A 23 REMARK 465 GLU A 24 REMARK 465 ALA A 25 REMARK 465 LYS A 26 REMARK 465 CYS A 27 REMARK 465 PRO A 28 REMARK 465 PHE A 29 REMARK 465 HIS A 30 REMARK 465 GLN A 31 REMARK 465 ALA A 32 REMARK 465 ALA A 33 REMARK 465 GLY A 34 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 GLY B 3 REMARK 465 SER B 4 REMARK 465 ASP B 5 REMARK 465 ALA B 6 REMARK 465 GLY B 7 REMARK 465 PRO B 8 REMARK 465 ARG B 9 REMARK 465 ARG B 10 REMARK 465 ARG B 11 REMARK 465 GLY B 12 REMARK 465 VAL B 13 REMARK 465 HIS B 14 REMARK 465 GLU B 15 REMARK 465 GLN B 16 REMARK 465 ARG B 17 REMARK 465 ARG B 18 REMARK 465 ASN B 19 REMARK 465 ARG B 20 REMARK 465 MET B 21 REMARK 465 SER B 22 REMARK 465 ASN B 23 REMARK 465 GLU B 24 REMARK 465 ALA B 25 REMARK 465 LYS B 26 REMARK 465 CYS B 27 REMARK 465 PRO B 28 REMARK 465 PHE B 29 REMARK 465 HIS B 30 REMARK 465 GLN B 31 REMARK 465 ALA B 32 REMARK 465 ALA B 33 REMARK 465 GLY B 34 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 35 CG OD1 ND2 REMARK 470 ASN B 35 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2007 O HOH B 2009 1.88 REMARK 500 O HOH A 1772 O HOH A 2047 2.11 REMARK 500 O1 PO4 A 1001 O HOH A 1746 2.14 REMARK 500 O HOH A 1506 O HOH A 1514 2.15 REMARK 500 O HOH A 1504 O HOH A 1514 2.16 REMARK 500 OD1 ASP B 512 O HOH B 2348 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 532 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ARG A 713 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 713 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 95 77.50 -154.26 REMARK 500 TYR A 238 -65.19 -124.24 REMARK 500 ARG A 314 -122.65 51.05 REMARK 500 THR A 323 -72.94 -120.32 REMARK 500 SER A 708 -53.12 -120.45 REMARK 500 TRP B 95 75.85 -157.63 REMARK 500 PHE B 99 19.67 52.42 REMARK 500 ASN B 144 -1.02 68.95 REMARK 500 TYR B 238 -70.72 -126.84 REMARK 500 ARG B 314 -127.36 52.53 REMARK 500 THR B 323 -67.93 -121.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2147 DISTANCE = 5.74 ANGSTROMS REMARK 525 HOH B2700 DISTANCE = 5.42 ANGSTROMS REMARK 525 HOH B2708 DISTANCE = 5.30 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A1500 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 279 NE2 REMARK 620 2 HEM A1500 NA 97.7 REMARK 620 3 HEM A1500 NB 97.5 88.2 REMARK 620 4 HEM A1500 NC 96.9 165.4 91.1 REMARK 620 5 HEM A1500 ND 98.8 87.6 163.5 88.9 REMARK 620 6 HOH A1504 O 170.6 73.1 84.5 92.3 79.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B1500 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 279 NE2 REMARK 620 2 HEM B1500 NA 100.7 REMARK 620 3 HEM B1500 NB 96.7 89.8 REMARK 620 4 HEM B1500 NC 94.5 164.7 90.0 REMARK 620 5 HEM B1500 ND 101.2 86.6 162.0 88.9 REMARK 620 6 HOH B2006 O 177.7 79.3 81.0 85.5 81.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1000 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 494 O REMARK 620 2 GLY A 122 O 85.7 REMARK 620 3 GLY A 124 O 161.0 99.5 REMARK 620 4 HOH A1509 O 83.5 104.1 112.4 REMARK 620 5 HOH A1510 O 85.6 157.8 82.8 95.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B2000 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B2012 O REMARK 620 2 GLY B 124 O 79.7 REMARK 620 3 HOH B2011 O 93.0 109.7 REMARK 620 4 SER B 494 O 87.3 162.4 82.7 REMARK 620 5 GLY B 122 O 158.3 100.9 106.9 86.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 2000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 1500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM B 1500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD B 2002 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1MWV RELATED DB: PDB REMARK 900 CATALASE-PEROXIDASE KATG FROM B.PSEUDOMALLEI REMARK 900 RELATED ID: 2DV2 RELATED DB: PDB REMARK 900 THE SAME PROTEIN SOAKED TO PH 8.0 DBREF 2DV1 A 1 748 UNP Q939D2 Q939D2_BURPS 1 748 DBREF 2DV1 B 1 748 UNP Q939D2 Q939D2_BURPS 1 748 SEQADV 2DV1 GLU A 141 UNP Q939D2 ASP 141 ENGINEERED SEQADV 2DV1 GLU B 141 UNP Q939D2 ASP 141 ENGINEERED SEQRES 1 A 748 MET PRO GLY SER ASP ALA GLY PRO ARG ARG ARG GLY VAL SEQRES 2 A 748 HIS GLU GLN ARG ARG ASN ARG MET SER ASN GLU ALA LYS SEQRES 3 A 748 CYS PRO PHE HIS GLN ALA ALA GLY ASN GLY THR SER ASN SEQRES 4 A 748 ARG ASP TRP TRP PRO ASN GLN LEU ASP LEU SER ILE LEU SEQRES 5 A 748 HIS ARG HIS SER SER LEU SER ASP PRO MET GLY LYS ASP SEQRES 6 A 748 PHE ASN TYR ALA GLN ALA PHE GLU LYS LEU ASP LEU ALA SEQRES 7 A 748 ALA VAL LYS ARG ASP LEU HIS ALA LEU MET THR THR SER SEQRES 8 A 748 GLN ASP TRP TRP PRO ALA ASP PHE GLY HIS TYR GLY GLY SEQRES 9 A 748 LEU PHE ILE ARG MET ALA TRP HIS SER ALA GLY THR TYR SEQRES 10 A 748 ARG THR ALA ASP GLY ARG GLY GLY ALA GLY GLU GLY GLN SEQRES 11 A 748 GLN ARG PHE ALA PRO LEU ASN SER TRP PRO GLU ASN ALA SEQRES 12 A 748 ASN LEU ASP LYS ALA ARG ARG LEU LEU TRP PRO ILE LYS SEQRES 13 A 748 GLN LYS TYR GLY ARG ALA ILE SER TRP ALA ASP LEU LEU SEQRES 14 A 748 ILE LEU THR GLY ASN VAL ALA LEU GLU SER MET GLY PHE SEQRES 15 A 748 LYS THR PHE GLY PHE ALA GLY GLY ARG ALA ASP THR TRP SEQRES 16 A 748 GLU PRO GLU ASP VAL TYR TRP GLY SER GLU LYS ILE TRP SEQRES 17 A 748 LEU GLU LEU SER GLY GLY PRO ASN SER ARG TYR SER GLY SEQRES 18 A 748 ASP ARG GLN LEU GLU ASN PRO LEU ALA ALA VAL GLN MET SEQRES 19 A 748 GLY LEU ILE TYR VAL ASN PRO GLU GLY PRO ASP GLY ASN SEQRES 20 A 748 PRO ASP PRO VAL ALA ALA ALA ARG ASP ILE ARG ASP THR SEQRES 21 A 748 PHE ALA ARG MET ALA MET ASN ASP GLU GLU THR VAL ALA SEQRES 22 A 748 LEU ILE ALA GLY GLY HIS THR PHE GLY LYS THR HIS GLY SEQRES 23 A 748 ALA GLY PRO ALA SER ASN VAL GLY ALA GLU PRO GLU ALA SEQRES 24 A 748 ALA GLY ILE GLU ALA GLN GLY LEU GLY TRP LYS SER ALA SEQRES 25 A 748 TYR ARG THR GLY LYS GLY ALA ASP ALA ILE THR SER GLY SEQRES 26 A 748 LEU GLU VAL THR TRP THR THR THR PRO THR GLN TRP SER SEQRES 27 A 748 HIS ASN PHE PHE GLU ASN LEU PHE GLY TYR GLU TRP GLU SEQRES 28 A 748 LEU THR LYS SER PRO ALA GLY ALA HIS GLN TRP VAL ALA SEQRES 29 A 748 LYS GLY ALA ASP ALA VAL ILE PRO ASP ALA PHE ASP PRO SEQRES 30 A 748 SER LYS LYS HIS ARG PRO THR MET LEU THR THR ASP LEU SEQRES 31 A 748 SER LEU ARG PHE ASP PRO ALA TYR GLU LYS ILE SER ARG SEQRES 32 A 748 ARG PHE HIS GLU ASN PRO GLU GLN PHE ALA ASP ALA PHE SEQRES 33 A 748 ALA ARG ALA TRP PHE LYS LEU THR HIS ARG ASP MET GLY SEQRES 34 A 748 PRO ARG ALA ARG TYR LEU GLY PRO GLU VAL PRO ALA GLU SEQRES 35 A 748 VAL LEU LEU TRP GLN ASP PRO ILE PRO ALA VAL ASP HIS SEQRES 36 A 748 PRO LEU ILE ASP ALA ALA ASP ALA ALA GLU LEU LYS ALA SEQRES 37 A 748 LYS VAL LEU ALA SER GLY LEU THR VAL SER GLN LEU VAL SEQRES 38 A 748 SER THR ALA TRP ALA ALA ALA SER THR PHE ARG GLY SER SEQRES 39 A 748 ASP LYS ARG GLY GLY ALA ASN GLY ALA ARG ILE ARG LEU SEQRES 40 A 748 ALA PRO GLN LYS ASP TRP GLU ALA ASN GLN PRO GLU GLN SEQRES 41 A 748 LEU ALA ALA VAL LEU GLU THR LEU GLU ALA ILE ARG THR SEQRES 42 A 748 ALA PHE ASN GLY ALA GLN ARG GLY GLY LYS GLN VAL SER SEQRES 43 A 748 LEU ALA ASP LEU ILE VAL LEU ALA GLY CYS ALA GLY VAL SEQRES 44 A 748 GLU GLN ALA ALA LYS ASN ALA GLY HIS ALA VAL THR VAL SEQRES 45 A 748 PRO PHE ALA PRO GLY ARG ALA ASP ALA SER GLN GLU GLN SEQRES 46 A 748 THR ASP VAL GLU SER MET ALA VAL LEU GLU PRO VAL ALA SEQRES 47 A 748 ASP GLY PHE ARG ASN TYR LEU LYS GLY LYS TYR ARG VAL SEQRES 48 A 748 PRO ALA GLU VAL LEU LEU VAL ASP LYS ALA GLN LEU LEU SEQRES 49 A 748 THR LEU SER ALA PRO GLU MET THR VAL LEU LEU GLY GLY SEQRES 50 A 748 LEU ARG VAL LEU GLY ALA ASN VAL GLY GLN SER ARG HIS SEQRES 51 A 748 GLY VAL PHE THR ALA ARG GLU GLN ALA LEU THR ASN ASP SEQRES 52 A 748 PHE PHE VAL ASN LEU LEU ASP MET GLY THR GLU TRP LYS SEQRES 53 A 748 PRO THR ALA ALA ASP ALA ASP VAL PHE GLU GLY ARG ASP SEQRES 54 A 748 ARG ALA THR GLY GLU LEU LYS TRP THR GLY THR ARG VAL SEQRES 55 A 748 ASP LEU VAL PHE GLY SER HIS SER GLN LEU ARG ALA LEU SEQRES 56 A 748 ALA GLU VAL TYR GLY SER ALA ASP ALA GLN GLU LYS PHE SEQRES 57 A 748 VAL ARG ASP PHE VAL ALA VAL TRP ASN LYS VAL MET ASN SEQRES 58 A 748 LEU ASP ARG PHE ASP LEU ALA SEQRES 1 B 748 MET PRO GLY SER ASP ALA GLY PRO ARG ARG ARG GLY VAL SEQRES 2 B 748 HIS GLU GLN ARG ARG ASN ARG MET SER ASN GLU ALA LYS SEQRES 3 B 748 CYS PRO PHE HIS GLN ALA ALA GLY ASN GLY THR SER ASN SEQRES 4 B 748 ARG ASP TRP TRP PRO ASN GLN LEU ASP LEU SER ILE LEU SEQRES 5 B 748 HIS ARG HIS SER SER LEU SER ASP PRO MET GLY LYS ASP SEQRES 6 B 748 PHE ASN TYR ALA GLN ALA PHE GLU LYS LEU ASP LEU ALA SEQRES 7 B 748 ALA VAL LYS ARG ASP LEU HIS ALA LEU MET THR THR SER SEQRES 8 B 748 GLN ASP TRP TRP PRO ALA ASP PHE GLY HIS TYR GLY GLY SEQRES 9 B 748 LEU PHE ILE ARG MET ALA TRP HIS SER ALA GLY THR TYR SEQRES 10 B 748 ARG THR ALA ASP GLY ARG GLY GLY ALA GLY GLU GLY GLN SEQRES 11 B 748 GLN ARG PHE ALA PRO LEU ASN SER TRP PRO GLU ASN ALA SEQRES 12 B 748 ASN LEU ASP LYS ALA ARG ARG LEU LEU TRP PRO ILE LYS SEQRES 13 B 748 GLN LYS TYR GLY ARG ALA ILE SER TRP ALA ASP LEU LEU SEQRES 14 B 748 ILE LEU THR GLY ASN VAL ALA LEU GLU SER MET GLY PHE SEQRES 15 B 748 LYS THR PHE GLY PHE ALA GLY GLY ARG ALA ASP THR TRP SEQRES 16 B 748 GLU PRO GLU ASP VAL TYR TRP GLY SER GLU LYS ILE TRP SEQRES 17 B 748 LEU GLU LEU SER GLY GLY PRO ASN SER ARG TYR SER GLY SEQRES 18 B 748 ASP ARG GLN LEU GLU ASN PRO LEU ALA ALA VAL GLN MET SEQRES 19 B 748 GLY LEU ILE TYR VAL ASN PRO GLU GLY PRO ASP GLY ASN SEQRES 20 B 748 PRO ASP PRO VAL ALA ALA ALA ARG ASP ILE ARG ASP THR SEQRES 21 B 748 PHE ALA ARG MET ALA MET ASN ASP GLU GLU THR VAL ALA SEQRES 22 B 748 LEU ILE ALA GLY GLY HIS THR PHE GLY LYS THR HIS GLY SEQRES 23 B 748 ALA GLY PRO ALA SER ASN VAL GLY ALA GLU PRO GLU ALA SEQRES 24 B 748 ALA GLY ILE GLU ALA GLN GLY LEU GLY TRP LYS SER ALA SEQRES 25 B 748 TYR ARG THR GLY LYS GLY ALA ASP ALA ILE THR SER GLY SEQRES 26 B 748 LEU GLU VAL THR TRP THR THR THR PRO THR GLN TRP SER SEQRES 27 B 748 HIS ASN PHE PHE GLU ASN LEU PHE GLY TYR GLU TRP GLU SEQRES 28 B 748 LEU THR LYS SER PRO ALA GLY ALA HIS GLN TRP VAL ALA SEQRES 29 B 748 LYS GLY ALA ASP ALA VAL ILE PRO ASP ALA PHE ASP PRO SEQRES 30 B 748 SER LYS LYS HIS ARG PRO THR MET LEU THR THR ASP LEU SEQRES 31 B 748 SER LEU ARG PHE ASP PRO ALA TYR GLU LYS ILE SER ARG SEQRES 32 B 748 ARG PHE HIS GLU ASN PRO GLU GLN PHE ALA ASP ALA PHE SEQRES 33 B 748 ALA ARG ALA TRP PHE LYS LEU THR HIS ARG ASP MET GLY SEQRES 34 B 748 PRO ARG ALA ARG TYR LEU GLY PRO GLU VAL PRO ALA GLU SEQRES 35 B 748 VAL LEU LEU TRP GLN ASP PRO ILE PRO ALA VAL ASP HIS SEQRES 36 B 748 PRO LEU ILE ASP ALA ALA ASP ALA ALA GLU LEU LYS ALA SEQRES 37 B 748 LYS VAL LEU ALA SER GLY LEU THR VAL SER GLN LEU VAL SEQRES 38 B 748 SER THR ALA TRP ALA ALA ALA SER THR PHE ARG GLY SER SEQRES 39 B 748 ASP LYS ARG GLY GLY ALA ASN GLY ALA ARG ILE ARG LEU SEQRES 40 B 748 ALA PRO GLN LYS ASP TRP GLU ALA ASN GLN PRO GLU GLN SEQRES 41 B 748 LEU ALA ALA VAL LEU GLU THR LEU GLU ALA ILE ARG THR SEQRES 42 B 748 ALA PHE ASN GLY ALA GLN ARG GLY GLY LYS GLN VAL SER SEQRES 43 B 748 LEU ALA ASP LEU ILE VAL LEU ALA GLY CYS ALA GLY VAL SEQRES 44 B 748 GLU GLN ALA ALA LYS ASN ALA GLY HIS ALA VAL THR VAL SEQRES 45 B 748 PRO PHE ALA PRO GLY ARG ALA ASP ALA SER GLN GLU GLN SEQRES 46 B 748 THR ASP VAL GLU SER MET ALA VAL LEU GLU PRO VAL ALA SEQRES 47 B 748 ASP GLY PHE ARG ASN TYR LEU LYS GLY LYS TYR ARG VAL SEQRES 48 B 748 PRO ALA GLU VAL LEU LEU VAL ASP LYS ALA GLN LEU LEU SEQRES 49 B 748 THR LEU SER ALA PRO GLU MET THR VAL LEU LEU GLY GLY SEQRES 50 B 748 LEU ARG VAL LEU GLY ALA ASN VAL GLY GLN SER ARG HIS SEQRES 51 B 748 GLY VAL PHE THR ALA ARG GLU GLN ALA LEU THR ASN ASP SEQRES 52 B 748 PHE PHE VAL ASN LEU LEU ASP MET GLY THR GLU TRP LYS SEQRES 53 B 748 PRO THR ALA ALA ASP ALA ASP VAL PHE GLU GLY ARG ASP SEQRES 54 B 748 ARG ALA THR GLY GLU LEU LYS TRP THR GLY THR ARG VAL SEQRES 55 B 748 ASP LEU VAL PHE GLY SER HIS SER GLN LEU ARG ALA LEU SEQRES 56 B 748 ALA GLU VAL TYR GLY SER ALA ASP ALA GLN GLU LYS PHE SEQRES 57 B 748 VAL ARG ASP PHE VAL ALA VAL TRP ASN LYS VAL MET ASN SEQRES 58 B 748 LEU ASP ARG PHE ASP LEU ALA HET NA A1000 1 HET PO4 A1001 5 HET NA B2000 1 HET PO4 B2001 5 HET HEM A1500 43 HET HEM B1500 43 HET MPD B2002 8 HETNAM NA SODIUM ION HETNAM PO4 PHOSPHATE ION HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETSYN HEM HEME FORMUL 3 NA 2(NA 1+) FORMUL 4 PO4 2(O4 P 3-) FORMUL 7 HEM 2(C34 H32 FE N4 O4) FORMUL 9 MPD C6 H14 O2 FORMUL 10 HOH *1376(H2 O) HELIX 1 1 SER A 38 TRP A 43 1 6 HELIX 2 2 ASP A 48 HIS A 53 5 6 HELIX 3 3 SER A 56 ASP A 60 5 5 HELIX 4 4 ASN A 67 LYS A 74 1 8 HELIX 5 5 ASP A 76 THR A 89 1 14 HELIX 6 6 ALA A 97 HIS A 101 5 5 HELIX 7 7 TYR A 102 GLY A 115 1 14 HELIX 8 8 GLY A 129 PHE A 133 5 5 HELIX 9 9 PRO A 135 ALA A 143 5 9 HELIX 10 10 ASN A 144 LEU A 152 1 9 HELIX 11 11 LEU A 152 GLY A 160 1 9 HELIX 12 12 ARG A 161 ILE A 163 5 3 HELIX 13 13 SER A 164 MET A 180 1 17 HELIX 14 14 GLY A 243 ASN A 247 5 5 HELIX 15 15 ASP A 249 ARG A 263 1 15 HELIX 16 16 ASN A 267 HIS A 279 1 13 HELIX 17 17 PRO A 289 VAL A 293 5 5 HELIX 18 18 GLU A 296 ALA A 300 5 5 HELIX 19 19 GLY A 301 GLN A 305 5 5 HELIX 20 20 LYS A 317 ALA A 321 5 5 HELIX 21 21 HIS A 339 TYR A 348 1 10 HELIX 22 22 LEU A 386 ASP A 395 1 10 HELIX 23 23 ASP A 395 ASN A 408 1 14 HELIX 24 24 ASN A 408 ARG A 426 1 19 HELIX 25 25 PRO A 430 TYR A 434 5 5 HELIX 26 26 LEU A 444 ASP A 448 5 5 HELIX 27 27 ASP A 459 SER A 473 1 15 HELIX 28 28 THR A 476 SER A 489 1 14 HELIX 29 29 ALA A 503 LEU A 507 5 5 HELIX 30 30 PRO A 509 ASN A 516 5 8 HELIX 31 31 GLN A 517 ALA A 538 1 22 HELIX 32 32 SER A 546 ALA A 566 1 21 HELIX 33 33 ASP A 587 ALA A 592 1 6 HELIX 34 34 VAL A 593 GLU A 595 5 3 HELIX 35 35 GLY A 600 ASN A 603 5 4 HELIX 36 36 PRO A 612 LEU A 624 1 13 HELIX 37 37 SER A 627 GLY A 642 1 16 HELIX 38 38 ASN A 644 SER A 648 5 5 HELIX 39 39 ASN A 662 LEU A 669 1 8 HELIX 40 40 ARG A 701 VAL A 705 1 5 HELIX 41 41 PHE A 706 SER A 708 5 3 HELIX 42 42 HIS A 709 GLY A 720 1 12 HELIX 43 43 ALA A 724 ASN A 741 1 18 HELIX 44 44 SER B 38 TRP B 43 1 6 HELIX 45 45 ASP B 48 ARG B 54 5 7 HELIX 46 46 SER B 56 ASP B 60 5 5 HELIX 47 47 ASN B 67 LYS B 74 1 8 HELIX 48 48 ASP B 76 THR B 89 1 14 HELIX 49 49 ALA B 97 HIS B 101 5 5 HELIX 50 50 TYR B 102 GLY B 115 1 14 HELIX 51 51 GLY B 129 PHE B 133 5 5 HELIX 52 52 PRO B 135 ALA B 143 5 9 HELIX 53 53 ASN B 144 LEU B 152 1 9 HELIX 54 54 LEU B 152 GLY B 160 1 9 HELIX 55 55 ARG B 161 ILE B 163 5 3 HELIX 56 56 SER B 164 MET B 180 1 17 HELIX 57 57 GLY B 243 ASN B 247 5 5 HELIX 58 58 ASP B 249 ARG B 263 1 15 HELIX 59 59 ASN B 267 HIS B 279 1 13 HELIX 60 60 PRO B 289 VAL B 293 5 5 HELIX 61 61 GLU B 296 ALA B 300 5 5 HELIX 62 62 GLY B 301 GLN B 305 5 5 HELIX 63 63 LYS B 317 ALA B 321 5 5 HELIX 64 64 HIS B 339 TYR B 348 1 10 HELIX 65 65 LEU B 386 ASP B 395 1 10 HELIX 66 66 ASP B 395 ASN B 408 1 14 HELIX 67 67 ASN B 408 ARG B 426 1 19 HELIX 68 68 PRO B 430 TYR B 434 5 5 HELIX 69 69 LEU B 444 ASP B 448 5 5 HELIX 70 70 ASP B 459 SER B 473 1 15 HELIX 71 71 THR B 476 SER B 489 1 14 HELIX 72 72 ALA B 503 LEU B 507 5 5 HELIX 73 73 PRO B 509 ASN B 516 5 8 HELIX 74 74 GLN B 517 GLN B 539 1 23 HELIX 75 75 SER B 546 ALA B 566 1 21 HELIX 76 76 SER B 582 THR B 586 5 5 HELIX 77 77 ASP B 587 ALA B 592 1 6 HELIX 78 78 VAL B 593 GLU B 595 5 3 HELIX 79 79 GLY B 600 ASN B 603 5 4 HELIX 80 80 PRO B 612 LEU B 624 1 13 HELIX 81 81 SER B 627 GLY B 642 1 16 HELIX 82 82 ASN B 644 SER B 648 5 5 HELIX 83 83 ASN B 662 LEU B 669 1 8 HELIX 84 84 ARG B 701 VAL B 705 1 5 HELIX 85 85 PHE B 706 SER B 708 5 3 HELIX 86 86 HIS B 709 GLY B 720 1 12 HELIX 87 87 ALA B 724 ASN B 741 1 18 SHEET 1 A 2 TYR A 219 SER A 220 0 SHEET 2 A 2 GLN A 224 LEU A 225 -1 O GLN A 224 N SER A 220 SHEET 1 B 3 TRP A 350 LYS A 354 0 SHEET 2 B 3 HIS A 360 ALA A 364 -1 O GLN A 361 N THR A 353 SHEET 3 B 3 THR A 384 MET A 385 -1 O MET A 385 N TRP A 362 SHEET 1 C 2 ILE A 371 PRO A 372 0 SHEET 2 C 2 LYS A 380 HIS A 381 -1 O HIS A 381 N ILE A 371 SHEET 1 D 2 ALA A 598 ASP A 599 0 SHEET 2 D 2 TYR A 604 LEU A 605 -1 O TYR A 604 N ASP A 599 SHEET 1 E 3 THR A 673 PRO A 677 0 SHEET 2 E 3 VAL A 684 ASP A 689 -1 O ARG A 688 N GLU A 674 SHEET 3 E 3 LEU A 695 THR A 700 -1 O GLY A 699 N PHE A 685 SHEET 1 F 2 TYR B 219 SER B 220 0 SHEET 2 F 2 GLN B 224 LEU B 225 -1 O GLN B 224 N SER B 220 SHEET 1 G 3 TRP B 350 LYS B 354 0 SHEET 2 G 3 HIS B 360 ALA B 364 -1 O GLN B 361 N THR B 353 SHEET 3 G 3 THR B 384 MET B 385 -1 O MET B 385 N TRP B 362 SHEET 1 H 2 ILE B 371 PRO B 372 0 SHEET 2 H 2 LYS B 380 HIS B 381 -1 O HIS B 381 N ILE B 371 SHEET 1 I 2 ALA B 598 ASP B 599 0 SHEET 2 I 2 TYR B 604 LEU B 605 -1 O TYR B 604 N ASP B 599 SHEET 1 J 3 THR B 673 PRO B 677 0 SHEET 2 J 3 VAL B 684 ASP B 689 -1 O ARG B 688 N GLU B 674 SHEET 3 J 3 LEU B 695 THR B 700 -1 O LYS B 696 N GLY B 687 LINK CH2 TRP A 111 CE1 TYR A 238 1555 1555 1.55 LINK CE2 TYR A 238 SD MET A 264 1555 1555 1.83 LINK CE2 TYR B 238 SD MET B 264 1555 1555 1.80 LINK CH2 TRP B 111 CE1 TYR B 238 1555 1555 1.58 LINK NE2 HIS A 279 FE HEM A1500 1555 1555 2.14 LINK NE2 HIS B 279 FE HEM B1500 1555 1555 2.14 LINK NA NA A1000 O SER A 494 1555 1555 2.50 LINK NA NA A1000 O GLY A 122 1555 1555 2.53 LINK NA NA A1000 O GLY A 124 1555 1555 2.40 LINK NA NA A1000 O HOH A1509 1555 1555 2.39 LINK NA NA A1000 O HOH A1510 1555 1555 2.32 LINK FE HEM A1500 O HOH A1504 1555 1555 3.01 LINK FE HEM B1500 O HOH B2006 1555 1555 2.72 LINK NA NA B2000 O HOH B2012 1555 1555 2.36 LINK NA NA B2000 O GLY B 124 1555 1555 2.47 LINK NA NA B2000 O HOH B2011 1555 1555 2.42 LINK NA NA B2000 O SER B 494 1555 1555 2.50 LINK NA NA B2000 O GLY B 122 1555 1555 2.45 CISPEP 1 ALA A 134 PRO A 135 0 -2.48 CISPEP 2 ASN A 227 PRO A 228 0 2.50 CISPEP 3 ALA A 508 PRO A 509 0 -2.14 CISPEP 4 ALA B 134 PRO B 135 0 -0.65 CISPEP 5 ASN B 227 PRO B 228 0 9.21 CISPEP 6 ALA B 508 PRO B 509 0 -4.64 SITE 1 AC1 6 GLY A 122 ARG A 123 GLY A 124 SER A 494 SITE 2 AC1 6 HOH A1509 HOH A1510 SITE 1 AC2 3 HIS A 381 ARG A 382 HOH A1746 SITE 1 AC3 6 GLY B 122 ARG B 123 GLY B 124 SER B 494 SITE 2 AC3 6 HOH B2011 HOH B2012 SITE 1 AC4 3 LYS B 380 HIS B 381 ARG B 382 SITE 1 AC5 19 GLY A 104 LEU A 105 TRP A 111 PRO A 241 SITE 2 AC5 19 LEU A 274 ILE A 275 GLY A 278 HIS A 279 SITE 3 AC5 19 GLY A 282 LYS A 283 THR A 284 HIS A 285 SITE 4 AC5 19 THR A 323 SER A 324 THR A 388 HOH A1504 SITE 5 AC5 19 HOH A1566 HOH A1567 HOH A1573 SITE 1 AC6 21 GLY B 104 LEU B 105 TRP B 111 VAL B 239 SITE 2 AC6 21 LEU B 274 ILE B 275 GLY B 278 HIS B 279 SITE 3 AC6 21 PHE B 281 GLY B 282 LYS B 283 THR B 284 SITE 4 AC6 21 HIS B 285 THR B 323 SER B 324 THR B 388 SITE 5 AC6 21 TRP B 420 HOH B2006 HOH B2054 HOH B2055 SITE 6 AC6 21 HOH B2062 SITE 1 AC7 9 TRP B 362 PHE B 394 GLY B 567 HIS B 568 SITE 2 AC7 9 ALA B 569 HOH B2238 HOH B2486 HOH B2688 SITE 3 AC7 9 HOH B2704 CRYST1 100.739 116.198 175.018 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009927 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008606 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005714 0.00000