HEADER IMMUNE SYSTEM 15-SEP-06 2DYP TITLE CRYSTAL STRUCTURE OF LILRB2(LIR2/ILT4/CD85D) COMPLEXED WITH HLA-G COMPND MOL_ID: 1; COMPND 2 MOLECULE: HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ALPHA CHAIN G; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES IN DATA BASE 25-300; COMPND 5 SYNONYM: HLA G ANTIGEN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: RESIDUES IN DATA BASE 24-219; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: 9 MER PEPTIDE FROM HISTONE H2A.X; COMPND 15 CHAIN: C; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: LEUKOCYTE IMMUNOGLOBULIN-LIKE RECEPTOR SUBFAMILY B MEMBER COMPND 19 2; COMPND 20 CHAIN: D; COMPND 21 SYNONYM: LEUKOCYTE IMMUNOGLOBULIN-LIKE RECEPTOR 2, LIR-2, COMPND 22 IMMUNOGLOBULIN- LIKE TRANSCRIPT 4, ILT-4, MONOCYTE/MACROPHAGE COMPND 23 IMMUNOGLOBULIN-LIKE RECEPTOR 10, MIR-10, CD85D ANTIGEN; COMPND 24 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGMT7; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PGMT7; SOURCE 19 MOL_ID: 3; SOURCE 20 SYNTHETIC: YES; SOURCE 21 OTHER_DETAILS: THIS PEPTIDE WAS CHEMICALLY SYNTHESIZED; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 24 ORGANISM_COMMON: HUMAN; SOURCE 25 ORGANISM_TAXID: 9606; SOURCE 26 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 27 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 28 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 29 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 30 EXPRESSION_SYSTEM_PLASMID: PGMT7 KEYWDS IMMUNOGLOBULIN-LIKE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR M.SHIROISHI,K.KUROKI,L.RASUBALA,D.KOHDA,K.MAENAKA REVDAT 5 16-OCT-24 2DYP 1 REMARK REVDAT 4 25-OCT-23 2DYP 1 REMARK REVDAT 3 10-NOV-21 2DYP 1 SEQADV REVDAT 2 24-FEB-09 2DYP 1 VERSN REVDAT 1 07-NOV-06 2DYP 0 JRNL AUTH M.SHIROISHI,K.KUROKI,L.RASUBALA,K.TSUMOTO,I.KUMAGAI, JRNL AUTH 2 E.KURIMOTO,K.KATO,D.KOHDA,K.MAENAKA JRNL TITL STRUCTURAL BASIS FOR RECOGNITION OF THE NONCLASSICAL MHC JRNL TITL 2 MOLECULE HLA-G BY THE LEUKOCYTE IG-LIKE RECEPTOR B2 JRNL TITL 3 (LILRB2/LIR2/ILT4/CD85D) JRNL REF PROC.NATL.ACAD.SCI.USA V. 103 16412 2006 JRNL REFN ISSN 0027-8424 JRNL PMID 17056715 JRNL DOI 10.1073/PNAS.0605228103 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1719921.490 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 25424 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1825 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.66 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3844 REMARK 3 BIN R VALUE (WORKING SET) : 0.2870 REMARK 3 BIN FREE R VALUE : 0.3540 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 7.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 303 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4610 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 86 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.72000 REMARK 3 B22 (A**2) : 7.72000 REMARK 3 B33 (A**2) : -15.44000 REMARK 3 B12 (A**2) : 9.54000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM SIGMAA (A) : 0.28 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.43 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.37 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.000 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 44.20 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DYP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-SEP-06. REMARK 100 THE DEPOSITION ID IS D_1000026007. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25468 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 10.80 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 11.00 REMARK 200 R MERGE FOR SHELL (I) : 0.41200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2D31, 2GW5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL PH8.0, 45% PEG400, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.24433 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 124.48867 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 124.48867 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 62.24433 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE INTERACTION BETWEEN HLA-G (THE MOLECULE COMPOSED OF REMARK 300 CHAIN A/B/C) AND LILRB2 (CHAIN D) IS A BIOLOGICAL UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 GLY D 1 REMARK 465 THR D 2 REMARK 465 GLY D 136 REMARK 465 GLU D 137 REMARK 465 ASP D 138 REMARK 465 PRO D 148 REMARK 465 HIS D 149 REMARK 465 ALA D 150 REMARK 465 ARG D 151 REMARK 465 GLY D 152 REMARK 465 PRO D 196 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU D 11 CG CD OE1 OE2 REMARK 470 ASN D 166 CG OD1 ND2 REMARK 470 ARG D 167 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO D 52 C - N - CD ANGL. DEV. = -19.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 29 -123.99 63.47 REMARK 500 TYR A 123 -72.64 -118.70 REMARK 500 PHE A 195 -129.79 51.70 REMARK 500 PRO A 210 -176.41 -69.71 REMARK 500 GLU A 222 135.48 172.25 REMARK 500 THR A 225 -25.90 -29.79 REMARK 500 LYS A 243 142.37 -172.12 REMARK 500 GLU A 253 11.04 -148.52 REMARK 500 ILE B 1 123.26 95.82 REMARK 500 TRP B 60 -15.30 75.32 REMARK 500 LYS D 41 -4.79 56.02 REMARK 500 TRP D 46 -158.45 -56.67 REMARK 500 ILE D 47 -36.41 75.73 REMARK 500 PRO D 52 -44.54 -162.05 REMARK 500 HIS D 140 100.29 69.63 REMARK 500 SER D 146 -138.61 -100.99 REMARK 500 ASN D 166 48.38 -84.64 REMARK 500 SER D 180 74.36 -161.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1YPD RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HLA-G MONOMER REMARK 900 RELATED ID: 2D31 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HLA-G DIMER REMARK 900 RELATED ID: 2GW5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF LILRB2 DBREF 2DYP A 1 276 UNP P17693 HLAG_HUMAN 25 300 DBREF 2DYP B 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 2DYP C 1 9 UNP P16104 H2AX_HUMAN 78 86 DBREF 2DYP D 1 196 UNP Q8N423 LIRB2_HUMAN 24 219 SEQADV 2DYP MET A 0 UNP P17693 INITIATING METHIONINE SEQADV 2DYP SER A 42 UNP P17693 CYS 66 ENGINEERED MUTATION SEQADV 2DYP MET B 0 UNP P61769 INITIATING METHIONINE SEQADV 2DYP ARG D 61 UNP Q8N423 HIS 84 SEE REMARK 999 SEQRES 1 A 277 MET GLY SER HIS SER MET ARG TYR PHE SER ALA ALA VAL SEQRES 2 A 277 SER ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE ALA MET SEQRES 3 A 277 GLY TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP SER SEQRES 4 A 277 ASP SER ALA SER PRO ARG MET GLU PRO ARG ALA PRO TRP SEQRES 5 A 277 VAL GLU GLN GLU GLY PRO GLU TYR TRP GLU GLU GLU THR SEQRES 6 A 277 ARG ASN THR LYS ALA HIS ALA GLN THR ASP ARG MET ASN SEQRES 7 A 277 LEU GLN THR LEU ARG GLY TYR TYR ASN GLN SER GLU ALA SEQRES 8 A 277 SER SER HIS THR LEU GLN TRP MET ILE GLY CYS ASP LEU SEQRES 9 A 277 GLY SER ASP GLY ARG LEU LEU ARG GLY TYR GLU GLN TYR SEQRES 10 A 277 ALA TYR ASP GLY LYS ASP TYR LEU ALA LEU ASN GLU ASP SEQRES 11 A 277 LEU ARG SER TRP THR ALA ALA ASP THR ALA ALA GLN ILE SEQRES 12 A 277 SER LYS ARG LYS CYS GLU ALA ALA ASN VAL ALA GLU GLN SEQRES 13 A 277 ARG ARG ALA TYR LEU GLU GLY THR CYS VAL GLU TRP LEU SEQRES 14 A 277 HIS ARG TYR LEU GLU ASN GLY LYS GLU MET LEU GLN ARG SEQRES 15 A 277 ALA ASP PRO PRO LYS THR HIS VAL THR HIS HIS PRO VAL SEQRES 16 A 277 PHE ASP TYR GLU ALA THR LEU ARG CYS TRP ALA LEU GLY SEQRES 17 A 277 PHE TYR PRO ALA GLU ILE ILE LEU THR TRP GLN ARG ASP SEQRES 18 A 277 GLY GLU ASP GLN THR GLN ASP VAL GLU LEU VAL GLU THR SEQRES 19 A 277 ARG PRO ALA GLY ASP GLY THR PHE GLN LYS TRP ALA ALA SEQRES 20 A 277 VAL VAL VAL PRO SER GLY GLU GLU GLN ARG TYR THR CYS SEQRES 21 A 277 HIS VAL GLN HIS GLU GLY LEU PRO GLU PRO LEU MET LEU SEQRES 22 A 277 ARG TRP LYS GLN SEQRES 1 B 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 B 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 B 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 B 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 B 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 B 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 B 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 B 100 LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 C 9 ARG ILE ILE PRO ARG HIS LEU GLN LEU SEQRES 1 D 196 GLY THR ILE PRO LYS PRO THR LEU TRP ALA GLU PRO ASP SEQRES 2 D 196 SER VAL ILE THR GLN GLY SER PRO VAL THR LEU SER CYS SEQRES 3 D 196 GLN GLY SER LEU GLU ALA GLN GLU TYR ARG LEU TYR ARG SEQRES 4 D 196 GLU LYS LYS SER ALA SER TRP ILE THR ARG ILE ARG PRO SEQRES 5 D 196 GLU LEU VAL LYS ASN GLY GLN PHE ARG ILE PRO SER ILE SEQRES 6 D 196 THR TRP GLU HIS THR GLY ARG TYR GLY CYS GLN TYR TYR SEQRES 7 D 196 SER ARG ALA ARG TRP SER GLU LEU SER ASP PRO LEU VAL SEQRES 8 D 196 LEU VAL MET THR GLY ALA TYR PRO LYS PRO THR LEU SER SEQRES 9 D 196 ALA GLN PRO SER PRO VAL VAL THR SER GLY GLY ARG VAL SEQRES 10 D 196 THR LEU GLN CYS GLU SER GLN VAL ALA PHE GLY GLY PHE SEQRES 11 D 196 ILE LEU CYS LYS GLU GLY GLU ASP GLU HIS PRO GLN CYS SEQRES 12 D 196 LEU ASN SER GLN PRO HIS ALA ARG GLY SER SER ARG ALA SEQRES 13 D 196 ILE PHE SER VAL GLY PRO VAL SER PRO ASN ARG ARG TRP SEQRES 14 D 196 SER HIS ARG CYS TYR GLY TYR ASP LEU ASN SER PRO TYR SEQRES 15 D 196 VAL TRP SER SER PRO SER ASP LEU LEU GLU LEU LEU VAL SEQRES 16 D 196 PRO FORMUL 5 HOH *86(H2 O) HELIX 1 1 ALA A 49 GLN A 54 1 6 HELIX 2 2 GLY A 56 TYR A 85 1 30 HELIX 3 3 ASP A 137 ALA A 150 1 14 HELIX 4 4 VAL A 152 GLY A 162 1 11 HELIX 5 5 GLY A 162 GLY A 175 1 14 HELIX 6 6 GLY A 175 GLN A 180 1 6 HELIX 7 7 GLU A 253 GLN A 255 5 3 HELIX 8 8 LEU D 54 ASN D 57 5 4 HELIX 9 9 THR D 66 THR D 70 5 5 SHEET 1 A 8 GLU A 46 PRO A 47 0 SHEET 2 A 8 THR A 31 ASP A 37 -1 N ARG A 35 O GLU A 46 SHEET 3 A 8 ARG A 21 VAL A 28 -1 N GLY A 26 O PHE A 33 SHEET 4 A 8 SER A 4 VAL A 12 -1 N ARG A 6 O TYR A 27 SHEET 5 A 8 THR A 94 LEU A 103 -1 O TRP A 97 N SER A 9 SHEET 6 A 8 LEU A 109 TYR A 118 -1 O LEU A 110 N ASP A 102 SHEET 7 A 8 LYS A 121 LEU A 126 -1 O LEU A 126 N GLU A 114 SHEET 8 A 8 TRP A 133 ALA A 135 -1 O THR A 134 N ALA A 125 SHEET 1 B 4 LYS A 186 VAL A 194 0 SHEET 2 B 4 GLU A 198 PHE A 208 -1 O TRP A 204 N HIS A 188 SHEET 3 B 4 PHE A 241 PRO A 250 -1 O ALA A 245 N CYS A 203 SHEET 4 B 4 GLU A 229 LEU A 230 -1 N GLU A 229 O ALA A 246 SHEET 1 C 4 LYS A 186 VAL A 194 0 SHEET 2 C 4 GLU A 198 PHE A 208 -1 O TRP A 204 N HIS A 188 SHEET 3 C 4 PHE A 241 PRO A 250 -1 O ALA A 245 N CYS A 203 SHEET 4 C 4 ARG A 234 PRO A 235 -1 N ARG A 234 O GLN A 242 SHEET 1 D 3 ILE A 214 ARG A 219 0 SHEET 2 D 3 TYR A 257 GLN A 262 -1 O HIS A 260 N THR A 216 SHEET 3 D 3 LEU A 270 LEU A 272 -1 O LEU A 272 N CYS A 259 SHEET 1 E 4 LYS B 6 SER B 11 0 SHEET 2 E 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 E 4 PHE B 62 PHE B 70 -1 O TYR B 66 N CYS B 25 SHEET 4 E 4 GLU B 50 HIS B 51 -1 N GLU B 50 O TYR B 67 SHEET 1 F 4 LYS B 6 SER B 11 0 SHEET 2 F 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 F 4 PHE B 62 PHE B 70 -1 O TYR B 66 N CYS B 25 SHEET 4 F 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 G 4 GLU B 44 ILE B 46 0 SHEET 2 G 4 GLU B 36 LYS B 41 -1 N LEU B 39 O ILE B 46 SHEET 3 G 4 TYR B 78 ASN B 83 -1 O ALA B 79 N LEU B 40 SHEET 4 G 4 LYS B 91 LYS B 94 -1 O LYS B 91 N VAL B 82 SHEET 1 H 3 THR D 7 TRP D 9 0 SHEET 2 H 3 VAL D 22 GLN D 27 -1 O GLN D 27 N THR D 7 SHEET 3 H 3 GLN D 59 ILE D 62 -1 O ILE D 62 N VAL D 22 SHEET 1 I 4 VAL D 15 THR D 17 0 SHEET 2 I 4 LEU D 90 THR D 95 1 O VAL D 93 N ILE D 16 SHEET 3 I 4 GLY D 71 SER D 79 -1 N TYR D 73 O LEU D 90 SHEET 4 I 4 GLU D 34 ARG D 39 -1 N TYR D 38 O GLY D 74 SHEET 1 J 4 VAL D 15 THR D 17 0 SHEET 2 J 4 LEU D 90 THR D 95 1 O VAL D 93 N ILE D 16 SHEET 3 J 4 GLY D 71 SER D 79 -1 N TYR D 73 O LEU D 90 SHEET 4 J 4 ARG D 82 TRP D 83 -1 O ARG D 82 N SER D 79 SHEET 1 K 3 THR D 102 GLN D 106 0 SHEET 2 K 3 GLY D 115 GLU D 122 -1 O GLU D 122 N THR D 102 SHEET 3 K 3 ARG D 155 VAL D 163 -1 O PHE D 158 N LEU D 119 SHEET 1 L 4 GLN D 142 ASN D 145 0 SHEET 2 L 4 GLY D 129 GLU D 135 -1 N LEU D 132 O LEU D 144 SHEET 3 L 4 SER D 170 TYR D 176 -1 O ARG D 172 N CYS D 133 SHEET 4 L 4 LEU D 191 GLU D 192 -1 O LEU D 191 N HIS D 171 SSBOND 1 CYS A 101 CYS A 164 1555 1555 2.04 SSBOND 2 CYS A 203 CYS A 259 1555 1555 2.03 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.03 SSBOND 4 CYS D 26 CYS D 75 1555 1555 2.05 SSBOND 5 CYS D 121 CYS D 173 1555 1555 2.04 SSBOND 6 CYS D 133 CYS D 143 1555 1555 2.04 CISPEP 1 TYR A 209 PRO A 210 0 0.20 CISPEP 2 HIS B 31 PRO B 32 0 0.45 CISPEP 3 GLU D 11 PRO D 12 0 -0.07 CISPEP 4 ARG D 51 PRO D 52 0 -1.18 CISPEP 5 GLN D 106 PRO D 107 0 0.03 CISPEP 6 GLY D 161 PRO D 162 0 0.00 CRYST1 81.400 81.400 186.733 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012285 0.007093 0.000000 0.00000 SCALE2 0.000000 0.014186 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005355 0.00000 CONECT 816 1311 CONECT 1311 816 CONECT 1643 2092 CONECT 2092 1643 CONECT 2452 2915 CONECT 2915 2452 CONECT 3334 3746 CONECT 3746 3334 CONECT 4097 4434 CONECT 4185 4244 CONECT 4244 4185 CONECT 4434 4097 MASTER 309 0 0 9 49 0 0 6 4696 4 12 47 END