data_2E5I # _entry.id 2E5I # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2E5I pdb_00002e5i 10.2210/pdb2e5i/pdb RCSB RCSB026250 ? ? WWPDB D_1000026250 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id mmt007008935.3 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2E5I _pdbx_database_status.recvd_initial_deposition_date 2006-12-21 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tsuda, K.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Terada, T.' 5 'Shirouzu, M.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of RNA binding domain 2 in Heterogeneous nuclear ribonucleoprotein L-like' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tsuda, K.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Terada, T.' 5 ? primary 'Shirouzu, M.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Heterogeneous nuclear ribonucleoprotein L-like' _entity.formula_weight 13623.613 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RNA recognition motif' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGKRITRPGNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRNGIQAMVEFESVLCAQKAKA ALNGADIYAGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRR ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGKRITRPGNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRNGIQAMVEFESVLCAQKAKA ALNGADIYAGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier mmt007008935.3 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 LYS n 1 9 ARG n 1 10 ILE n 1 11 THR n 1 12 ARG n 1 13 PRO n 1 14 GLY n 1 15 ASN n 1 16 THR n 1 17 ASP n 1 18 ASP n 1 19 PRO n 1 20 SER n 1 21 GLY n 1 22 GLY n 1 23 ASN n 1 24 LYS n 1 25 VAL n 1 26 LEU n 1 27 LEU n 1 28 LEU n 1 29 SER n 1 30 ILE n 1 31 GLN n 1 32 ASN n 1 33 PRO n 1 34 LEU n 1 35 TYR n 1 36 PRO n 1 37 ILE n 1 38 THR n 1 39 VAL n 1 40 ASP n 1 41 VAL n 1 42 LEU n 1 43 TYR n 1 44 THR n 1 45 VAL n 1 46 CYS n 1 47 ASN n 1 48 PRO n 1 49 VAL n 1 50 GLY n 1 51 LYS n 1 52 VAL n 1 53 GLN n 1 54 ARG n 1 55 ILE n 1 56 VAL n 1 57 ILE n 1 58 PHE n 1 59 LYS n 1 60 ARG n 1 61 ASN n 1 62 GLY n 1 63 ILE n 1 64 GLN n 1 65 ALA n 1 66 MET n 1 67 VAL n 1 68 GLU n 1 69 PHE n 1 70 GLU n 1 71 SER n 1 72 VAL n 1 73 LEU n 1 74 CYS n 1 75 ALA n 1 76 GLN n 1 77 LYS n 1 78 ALA n 1 79 LYS n 1 80 ALA n 1 81 ALA n 1 82 LEU n 1 83 ASN n 1 84 GLY n 1 85 ALA n 1 86 ASP n 1 87 ILE n 1 88 TYR n 1 89 ALA n 1 90 GLY n 1 91 CYS n 1 92 CYS n 1 93 THR n 1 94 LEU n 1 95 LYS n 1 96 ILE n 1 97 GLU n 1 98 TYR n 1 99 ALA n 1 100 ARG n 1 101 PRO n 1 102 THR n 1 103 ARG n 1 104 LEU n 1 105 ASN n 1 106 VAL n 1 107 ILE n 1 108 ARG n 1 109 ASN n 1 110 ASP n 1 111 ASN n 1 112 ASP n 1 113 SER n 1 114 TRP n 1 115 ASP n 1 116 TYR n 1 117 THR n 1 118 LYS n 1 119 PRO n 1 120 TYR n 1 121 LEU n 1 122 GLY n 1 123 ARG n 1 124 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene Hnrpll _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Cell-free synthesis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P060515-23 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HNRLL_MOUSE _struct_ref.pdbx_db_accession Q921F4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KRITRPGNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRNGIQAMVEFESVLCAQKAKAALNGADI YAGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRR ; _struct_ref.pdbx_align_begin 200 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2E5I _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 124 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q921F4 _struct_ref_seq.db_align_beg 200 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 316 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 200 _struct_ref_seq.pdbx_auth_seq_align_end 316 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2E5I GLY A 1 ? UNP Q921F4 ? ? 'cloning artifact' 193 1 1 2E5I SER A 2 ? UNP Q921F4 ? ? 'cloning artifact' 194 2 1 2E5I SER A 3 ? UNP Q921F4 ? ? 'cloning artifact' 195 3 1 2E5I GLY A 4 ? UNP Q921F4 ? ? 'cloning artifact' 196 4 1 2E5I SER A 5 ? UNP Q921F4 ? ? 'cloning artifact' 197 5 1 2E5I SER A 6 ? UNP Q921F4 ? ? 'cloning artifact' 198 6 1 2E5I GLY A 7 ? UNP Q921F4 ? ? 'cloning artifact' 199 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_13C-separated_NOESY 1 2 1 3D_15N-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.26mM 13C-15N PROTEIN, 20mM d-Tris-HCl(pH7.0), 100mM NaCl, 1mM d-DTT, 0.02% NaN3, 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2E5I _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2E5I _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations,structures with the lowest energy,target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2E5I _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20060702 Delaglio,F 2 'data analysis' NMRView 5.0.4 Johnson,B.A 3 'data analysis' KUJIRA 0.9820 Kobayashi,N 4 'structure solution' CYANA 2.0.17 Guntert,P 5 refinement CYANA 2.0.17 Guntert,P 6 # _exptl.entry_id 2E5I _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2E5I _struct.title 'Solution structure of RNA binding domain 2 in Heterogeneous nuclear ribonucleoprotein L-like' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2E5I _struct_keywords.pdbx_keywords 'GENE REGULATION' _struct_keywords.text ;RRM domain, RBD, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, GENE REGULATION ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 38 ? ASN A 47 ? THR A 230 ASN A 239 1 ? 10 HELX_P HELX_P2 2 SER A 71 ? ASN A 83 ? SER A 263 ASN A 275 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 93 ? GLU A 97 ? THR A 285 GLU A 289 A 2 VAL A 25 ? GLN A 31 ? VAL A 217 GLN A 223 A 3 ILE A 63 ? PHE A 69 ? ILE A 255 PHE A 261 A 4 VAL A 52 ? LYS A 59 ? VAL A 244 LYS A 251 A 5 SER A 113 ? ASP A 115 ? SER A 305 ASP A 307 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 93 ? O THR A 285 N GLN A 31 ? N GLN A 223 A 2 3 N LEU A 26 ? N LEU A 218 O VAL A 67 ? O VAL A 259 A 3 4 O MET A 66 ? O MET A 258 N VAL A 56 ? N VAL A 248 A 4 5 N ILE A 55 ? N ILE A 247 O TRP A 114 ? O TRP A 306 # _database_PDB_matrix.entry_id 2E5I _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2E5I _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 193 193 GLY GLY A . n A 1 2 SER 2 194 194 SER SER A . n A 1 3 SER 3 195 195 SER SER A . n A 1 4 GLY 4 196 196 GLY GLY A . n A 1 5 SER 5 197 197 SER SER A . n A 1 6 SER 6 198 198 SER SER A . n A 1 7 GLY 7 199 199 GLY GLY A . n A 1 8 LYS 8 200 200 LYS LYS A . n A 1 9 ARG 9 201 201 ARG ARG A . n A 1 10 ILE 10 202 202 ILE ILE A . n A 1 11 THR 11 203 203 THR THR A . n A 1 12 ARG 12 204 204 ARG ARG A . n A 1 13 PRO 13 205 205 PRO PRO A . n A 1 14 GLY 14 206 206 GLY GLY A . n A 1 15 ASN 15 207 207 ASN ASN A . n A 1 16 THR 16 208 208 THR THR A . n A 1 17 ASP 17 209 209 ASP ASP A . n A 1 18 ASP 18 210 210 ASP ASP A . n A 1 19 PRO 19 211 211 PRO PRO A . n A 1 20 SER 20 212 212 SER SER A . n A 1 21 GLY 21 213 213 GLY GLY A . n A 1 22 GLY 22 214 214 GLY GLY A . n A 1 23 ASN 23 215 215 ASN ASN A . n A 1 24 LYS 24 216 216 LYS LYS A . n A 1 25 VAL 25 217 217 VAL VAL A . n A 1 26 LEU 26 218 218 LEU LEU A . n A 1 27 LEU 27 219 219 LEU LEU A . n A 1 28 LEU 28 220 220 LEU LEU A . n A 1 29 SER 29 221 221 SER SER A . n A 1 30 ILE 30 222 222 ILE ILE A . n A 1 31 GLN 31 223 223 GLN GLN A . n A 1 32 ASN 32 224 224 ASN ASN A . n A 1 33 PRO 33 225 225 PRO PRO A . n A 1 34 LEU 34 226 226 LEU LEU A . n A 1 35 TYR 35 227 227 TYR TYR A . n A 1 36 PRO 36 228 228 PRO PRO A . n A 1 37 ILE 37 229 229 ILE ILE A . n A 1 38 THR 38 230 230 THR THR A . n A 1 39 VAL 39 231 231 VAL VAL A . n A 1 40 ASP 40 232 232 ASP ASP A . n A 1 41 VAL 41 233 233 VAL VAL A . n A 1 42 LEU 42 234 234 LEU LEU A . n A 1 43 TYR 43 235 235 TYR TYR A . n A 1 44 THR 44 236 236 THR THR A . n A 1 45 VAL 45 237 237 VAL VAL A . n A 1 46 CYS 46 238 238 CYS CYS A . n A 1 47 ASN 47 239 239 ASN ASN A . n A 1 48 PRO 48 240 240 PRO PRO A . n A 1 49 VAL 49 241 241 VAL VAL A . n A 1 50 GLY 50 242 242 GLY GLY A . n A 1 51 LYS 51 243 243 LYS LYS A . n A 1 52 VAL 52 244 244 VAL VAL A . n A 1 53 GLN 53 245 245 GLN GLN A . n A 1 54 ARG 54 246 246 ARG ARG A . n A 1 55 ILE 55 247 247 ILE ILE A . n A 1 56 VAL 56 248 248 VAL VAL A . n A 1 57 ILE 57 249 249 ILE ILE A . n A 1 58 PHE 58 250 250 PHE PHE A . n A 1 59 LYS 59 251 251 LYS LYS A . n A 1 60 ARG 60 252 252 ARG ARG A . n A 1 61 ASN 61 253 253 ASN ASN A . n A 1 62 GLY 62 254 254 GLY GLY A . n A 1 63 ILE 63 255 255 ILE ILE A . n A 1 64 GLN 64 256 256 GLN GLN A . n A 1 65 ALA 65 257 257 ALA ALA A . n A 1 66 MET 66 258 258 MET MET A . n A 1 67 VAL 67 259 259 VAL VAL A . n A 1 68 GLU 68 260 260 GLU GLU A . n A 1 69 PHE 69 261 261 PHE PHE A . n A 1 70 GLU 70 262 262 GLU GLU A . n A 1 71 SER 71 263 263 SER SER A . n A 1 72 VAL 72 264 264 VAL VAL A . n A 1 73 LEU 73 265 265 LEU LEU A . n A 1 74 CYS 74 266 266 CYS CYS A . n A 1 75 ALA 75 267 267 ALA ALA A . n A 1 76 GLN 76 268 268 GLN GLN A . n A 1 77 LYS 77 269 269 LYS LYS A . n A 1 78 ALA 78 270 270 ALA ALA A . n A 1 79 LYS 79 271 271 LYS LYS A . n A 1 80 ALA 80 272 272 ALA ALA A . n A 1 81 ALA 81 273 273 ALA ALA A . n A 1 82 LEU 82 274 274 LEU LEU A . n A 1 83 ASN 83 275 275 ASN ASN A . n A 1 84 GLY 84 276 276 GLY GLY A . n A 1 85 ALA 85 277 277 ALA ALA A . n A 1 86 ASP 86 278 278 ASP ASP A . n A 1 87 ILE 87 279 279 ILE ILE A . n A 1 88 TYR 88 280 280 TYR TYR A . n A 1 89 ALA 89 281 281 ALA ALA A . n A 1 90 GLY 90 282 282 GLY GLY A . n A 1 91 CYS 91 283 283 CYS CYS A . n A 1 92 CYS 92 284 284 CYS CYS A . n A 1 93 THR 93 285 285 THR THR A . n A 1 94 LEU 94 286 286 LEU LEU A . n A 1 95 LYS 95 287 287 LYS LYS A . n A 1 96 ILE 96 288 288 ILE ILE A . n A 1 97 GLU 97 289 289 GLU GLU A . n A 1 98 TYR 98 290 290 TYR TYR A . n A 1 99 ALA 99 291 291 ALA ALA A . n A 1 100 ARG 100 292 292 ARG ARG A . n A 1 101 PRO 101 293 293 PRO PRO A . n A 1 102 THR 102 294 294 THR THR A . n A 1 103 ARG 103 295 295 ARG ARG A . n A 1 104 LEU 104 296 296 LEU LEU A . n A 1 105 ASN 105 297 297 ASN ASN A . n A 1 106 VAL 106 298 298 VAL VAL A . n A 1 107 ILE 107 299 299 ILE ILE A . n A 1 108 ARG 108 300 300 ARG ARG A . n A 1 109 ASN 109 301 301 ASN ASN A . n A 1 110 ASP 110 302 302 ASP ASP A . n A 1 111 ASN 111 303 303 ASN ASN A . n A 1 112 ASP 112 304 304 ASP ASP A . n A 1 113 SER 113 305 305 SER SER A . n A 1 114 TRP 114 306 306 TRP TRP A . n A 1 115 ASP 115 307 307 ASP ASP A . n A 1 116 TYR 116 308 308 TYR TYR A . n A 1 117 THR 117 309 309 THR THR A . n A 1 118 LYS 118 310 310 LYS LYS A . n A 1 119 PRO 119 311 311 PRO PRO A . n A 1 120 TYR 120 312 312 TYR TYR A . n A 1 121 LEU 121 313 313 LEU LEU A . n A 1 122 GLY 122 314 314 GLY GLY A . n A 1 123 ARG 123 315 315 ARG ARG A . n A 1 124 ARG 124 316 316 ARG ARG A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-06-26 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 208 ? ? -34.35 125.02 2 1 SER A 212 ? ? -37.25 115.28 3 1 PRO A 225 ? ? -74.41 47.09 4 1 PRO A 240 ? ? -47.97 -17.40 5 1 ILE A 255 ? ? -48.10 102.72 6 1 ALA A 273 ? ? -39.78 -33.76 7 1 ASN A 275 ? ? -55.27 100.98 8 1 ALA A 281 ? ? -55.11 108.62 9 1 TYR A 290 ? ? -34.40 101.37 10 1 LEU A 313 ? ? -130.40 -61.21 11 1 ARG A 315 ? ? -84.32 41.84 12 2 SER A 197 ? ? -173.19 132.54 13 2 SER A 198 ? ? -174.21 127.84 14 2 LEU A 226 ? ? -91.81 -63.04 15 2 VAL A 231 ? ? -37.70 -33.58 16 2 PRO A 240 ? ? -48.00 -17.57 17 2 ILE A 255 ? ? -41.12 106.82 18 2 ASN A 275 ? ? -57.43 99.41 19 2 ASP A 278 ? ? -58.36 171.34 20 2 ALA A 281 ? ? -37.64 102.97 21 2 CYS A 283 ? ? -176.13 -175.13 22 2 CYS A 284 ? ? 36.36 41.42 23 2 TYR A 290 ? ? -35.99 100.47 24 2 ALA A 291 ? ? -49.10 159.13 25 3 ARG A 204 ? ? -174.63 143.60 26 3 VAL A 231 ? ? -38.55 -38.56 27 3 ASN A 275 ? ? -55.36 101.74 28 3 ALA A 281 ? ? -53.30 107.74 29 3 CYS A 283 ? ? -174.98 -177.57 30 3 CYS A 284 ? ? 39.36 38.58 31 3 THR A 285 ? ? -47.57 93.37 32 3 TYR A 290 ? ? -38.55 105.40 33 3 TYR A 312 ? ? -81.37 39.60 34 4 SER A 194 ? ? -38.41 -35.47 35 4 ASP A 209 ? ? -166.91 115.89 36 4 PRO A 211 ? ? -46.11 152.10 37 4 SER A 212 ? ? -102.50 40.90 38 4 ASN A 224 ? ? 38.33 54.00 39 4 PRO A 225 ? ? -44.67 100.37 40 4 VAL A 231 ? ? -38.41 -37.56 41 4 GLN A 245 ? ? -93.62 -65.35 42 4 LYS A 251 ? ? -99.67 40.99 43 4 ALA A 281 ? ? -51.97 103.77 44 4 TYR A 290 ? ? -41.53 105.12 45 4 ASN A 301 ? ? -92.34 46.94 46 5 ASP A 209 ? ? -36.54 149.79 47 5 SER A 212 ? ? -42.28 157.85 48 5 PRO A 225 ? ? -47.64 83.47 49 5 VAL A 231 ? ? -38.96 -26.38 50 5 GLN A 245 ? ? -104.20 -68.32 51 5 LYS A 251 ? ? -102.42 44.71 52 5 ILE A 255 ? ? -50.59 103.32 53 5 GLU A 262 ? ? -40.64 -73.71 54 5 ALA A 281 ? ? -45.11 102.95 55 5 THR A 285 ? ? -59.21 85.71 56 5 LEU A 286 ? ? -38.59 120.01 57 5 TYR A 290 ? ? -45.37 103.40 58 5 TYR A 312 ? ? -105.21 50.02 59 5 ARG A 315 ? ? 33.63 50.96 60 6 SER A 195 ? ? 39.63 42.34 61 6 VAL A 231 ? ? -37.65 -37.95 62 6 GLN A 245 ? ? -92.83 -62.69 63 6 LYS A 251 ? ? -100.12 40.05 64 6 ASN A 275 ? ? -56.92 101.03 65 6 ALA A 281 ? ? -59.63 104.44 66 6 TYR A 290 ? ? -39.55 107.38 67 7 SER A 197 ? ? -172.39 144.18 68 7 THR A 208 ? ? -48.58 102.61 69 7 SER A 212 ? ? -36.91 138.47 70 7 ASN A 224 ? ? 34.96 54.49 71 7 PRO A 225 ? ? -47.37 102.19 72 7 ILE A 255 ? ? -33.42 104.65 73 7 ALA A 272 ? ? -54.11 -70.65 74 7 ASN A 275 ? ? -60.00 104.29 75 7 ALA A 281 ? ? -52.86 103.37 76 7 TYR A 290 ? ? -49.15 101.91 77 7 ASN A 301 ? ? -102.55 44.06 78 7 TYR A 308 ? ? -78.86 45.83 79 7 TYR A 312 ? ? -103.81 41.69 80 8 GLN A 245 ? ? -79.94 -70.22 81 8 ILE A 255 ? ? -42.38 107.14 82 8 ALA A 281 ? ? -53.93 105.51 83 8 TYR A 290 ? ? -37.52 102.20 84 8 TYR A 312 ? ? -101.14 46.32 85 8 ARG A 315 ? ? -80.40 45.01 86 9 SER A 198 ? ? -35.42 149.31 87 9 ILE A 202 ? ? 32.07 53.92 88 9 SER A 212 ? ? -37.32 120.91 89 9 GLN A 223 ? ? -35.73 141.82 90 9 PRO A 225 ? ? -46.92 93.46 91 9 GLN A 245 ? ? -95.38 -60.55 92 9 ILE A 255 ? ? -39.79 114.10 93 9 ALA A 281 ? ? -51.09 102.44 94 9 TYR A 290 ? ? -51.61 97.22 95 9 ALA A 291 ? ? -49.59 156.46 96 10 ASN A 207 ? ? -67.62 91.67 97 10 PRO A 211 ? ? -45.08 103.28 98 10 VAL A 231 ? ? -35.16 -35.40 99 10 PRO A 240 ? ? -47.98 -18.60 100 10 LYS A 251 ? ? -98.25 43.19 101 10 ALA A 257 ? ? -162.12 118.63 102 10 ALA A 281 ? ? -39.82 101.05 103 10 TYR A 290 ? ? -39.71 100.22 104 10 TYR A 312 ? ? -108.93 40.09 105 11 THR A 203 ? ? -174.90 133.18 106 11 ARG A 204 ? ? -174.59 113.79 107 11 PRO A 225 ? ? -47.08 94.69 108 11 TYR A 235 ? ? -130.89 -36.14 109 11 GLN A 245 ? ? -109.84 -66.37 110 11 ILE A 255 ? ? -58.33 101.21 111 11 ALA A 272 ? ? -60.34 -71.69 112 11 ASN A 275 ? ? -59.84 100.42 113 11 ALA A 281 ? ? -53.73 103.46 114 11 TYR A 290 ? ? -38.30 106.43 115 11 TYR A 312 ? ? -105.79 46.11 116 11 LEU A 313 ? ? -106.42 41.88 117 12 PRO A 211 ? ? -45.50 167.52 118 12 SER A 212 ? ? -97.11 42.51 119 12 PRO A 225 ? ? -45.09 84.63 120 12 VAL A 233 ? ? -38.03 -37.45 121 12 GLN A 245 ? ? -101.70 -60.89 122 12 ASN A 275 ? ? -55.94 99.30 123 12 ALA A 281 ? ? -52.68 107.62 124 12 TYR A 290 ? ? -41.32 103.11 125 12 ASN A 301 ? ? -52.71 94.19 126 13 ASN A 224 ? ? 39.80 54.42 127 13 PRO A 225 ? ? -47.21 92.55 128 13 PRO A 240 ? ? -47.96 -19.92 129 13 ARG A 252 ? ? -67.54 86.34 130 13 ASN A 275 ? ? -57.36 104.70 131 13 ALA A 281 ? ? -50.28 103.62 132 13 TYR A 290 ? ? -34.74 107.27 133 13 TYR A 308 ? ? -84.10 38.51 134 13 TYR A 312 ? ? -81.00 39.83 135 14 ARG A 204 ? ? -38.34 133.94 136 14 PRO A 205 ? ? -78.82 35.80 137 14 ASN A 207 ? ? -69.58 83.07 138 14 SER A 212 ? ? -56.31 98.13 139 14 PRO A 225 ? ? -47.30 103.98 140 14 VAL A 233 ? ? -35.67 -36.97 141 14 THR A 236 ? ? -130.78 -36.22 142 14 GLN A 245 ? ? -108.09 -67.32 143 14 LYS A 251 ? ? -91.95 42.05 144 14 ARG A 252 ? ? -67.17 89.76 145 14 ILE A 255 ? ? -51.12 97.72 146 14 ALA A 272 ? ? -47.50 -71.79 147 14 ALA A 281 ? ? -50.77 104.90 148 14 TYR A 290 ? ? -40.83 102.56 149 14 TYR A 312 ? ? -101.04 44.01 150 15 LYS A 200 ? ? -174.72 116.18 151 15 ASN A 224 ? ? 35.50 53.76 152 15 PRO A 225 ? ? -45.98 106.69 153 15 ALA A 281 ? ? -54.20 105.34 154 15 TYR A 290 ? ? -45.84 96.17 155 15 ARG A 315 ? ? -87.11 39.58 156 16 SER A 194 ? ? -172.52 136.87 157 16 LYS A 200 ? ? -174.20 146.42 158 16 ILE A 202 ? ? -48.86 161.16 159 16 PRO A 205 ? ? -46.80 165.00 160 16 ASN A 224 ? ? 35.61 54.00 161 16 ARG A 252 ? ? -60.18 -70.43 162 16 ASN A 253 ? ? -107.15 48.16 163 16 GLU A 262 ? ? -37.91 -73.19 164 16 ASN A 275 ? ? -58.43 108.18 165 16 ALA A 281 ? ? -35.85 105.14 166 16 TYR A 290 ? ? -48.69 100.57 167 16 ARG A 300 ? ? -170.17 142.29 168 16 ASN A 301 ? ? -39.49 100.05 169 17 ASN A 207 ? ? -59.73 108.94 170 17 ASN A 215 ? ? -170.92 144.95 171 17 PRO A 225 ? ? -45.87 90.24 172 17 PRO A 240 ? ? -47.96 -18.63 173 17 GLN A 245 ? ? -108.22 -61.89 174 17 ILE A 255 ? ? -43.92 104.41 175 17 GLU A 262 ? ? -34.15 -70.12 176 17 ALA A 272 ? ? -60.05 -70.52 177 17 ASN A 275 ? ? -58.75 102.97 178 17 ALA A 281 ? ? -57.16 107.83 179 17 TYR A 290 ? ? -38.07 106.26 180 17 TYR A 308 ? ? -83.72 40.21 181 17 TYR A 312 ? ? -102.90 45.78 182 18 SER A 198 ? ? -171.32 146.56 183 18 PRO A 225 ? ? -44.70 103.61 184 18 VAL A 231 ? ? -33.62 -35.09 185 18 ASN A 253 ? ? -109.19 43.60 186 18 ASN A 275 ? ? -57.86 104.56 187 18 ALA A 281 ? ? -54.38 105.26 188 18 TYR A 290 ? ? -49.64 97.97 189 18 ASN A 303 ? ? -33.71 -39.74 190 18 TYR A 312 ? ? -104.14 69.84 191 19 SER A 212 ? ? -44.45 98.25 192 19 ASN A 224 ? ? 35.11 54.42 193 19 TYR A 235 ? ? -130.58 -37.25 194 19 ASN A 253 ? ? -109.52 43.26 195 19 ALA A 281 ? ? -56.87 104.54 196 19 LYS A 287 ? ? -116.71 79.53 197 19 TYR A 290 ? ? -41.12 101.01 198 19 PRO A 311 ? ? -70.71 -159.27 199 19 TYR A 312 ? ? 34.08 55.01 200 20 ILE A 202 ? ? -47.56 150.00 201 20 ASN A 224 ? ? 39.52 52.70 202 20 PRO A 225 ? ? -43.70 94.33 203 20 LYS A 251 ? ? -84.50 41.92 204 20 ILE A 255 ? ? -46.56 104.11 205 20 GLU A 262 ? ? -52.97 -72.95 206 20 ALA A 272 ? ? -46.86 -73.73 207 20 CYS A 284 ? ? 39.44 46.61 208 20 THR A 285 ? ? -57.86 90.85 209 20 TYR A 290 ? ? -43.08 98.48 210 20 TYR A 308 ? ? -98.61 44.18 #