data_2E5K # _entry.id 2E5K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2E5K pdb_00002e5k 10.2210/pdb2e5k/pdb RCSB RCSB026252 ? ? WWPDB D_1000026252 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk002001926.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2E5K _pdbx_database_status.recvd_initial_deposition_date 2006-12-21 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sukegawa, S.' 1 'Tsuda, K.' 2 'Muto, Y.' 3 'Inoue, M.' 4 'Kigawa, T.' 5 'Terada, T.' 6 'Shirouzu, M.' 7 'Yokoyama, S.' 8 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 9 # _citation.id primary _citation.title 'Solution structure of SH3 domain in Suppressor of T-cell receptor signaling 1' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sukegawa, S.' 1 ? primary 'Tsuda, K.' 2 ? primary 'Muto, Y.' 3 ? primary 'Inoue, M.' 4 ? primary 'Kigawa, T.' 5 ? primary 'Terada, T.' 6 ? primary 'Shirouzu, M.' 7 ? primary 'Yokoyama, S.' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Suppressor of T-cell receptor signaling 1' _entity.formula_weight 10150.963 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'SH3 domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Sts-1, Cbl-interacting protein p70' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGSRDIRFANHETLQVIYPYTPQNDDELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITKADEC STWIFHGSSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGSRDIRFANHETLQVIYPYTPQNDDELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITKADEC STWIFHGSSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk002001926.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 SER n 1 9 ARG n 1 10 ASP n 1 11 ILE n 1 12 ARG n 1 13 PHE n 1 14 ALA n 1 15 ASN n 1 16 HIS n 1 17 GLU n 1 18 THR n 1 19 LEU n 1 20 GLN n 1 21 VAL n 1 22 ILE n 1 23 TYR n 1 24 PRO n 1 25 TYR n 1 26 THR n 1 27 PRO n 1 28 GLN n 1 29 ASN n 1 30 ASP n 1 31 ASP n 1 32 GLU n 1 33 LEU n 1 34 GLU n 1 35 LEU n 1 36 VAL n 1 37 PRO n 1 38 GLY n 1 39 ASP n 1 40 PHE n 1 41 ILE n 1 42 PHE n 1 43 MET n 1 44 SER n 1 45 PRO n 1 46 MET n 1 47 GLU n 1 48 GLN n 1 49 THR n 1 50 SER n 1 51 THR n 1 52 SER n 1 53 GLU n 1 54 GLY n 1 55 TRP n 1 56 ILE n 1 57 TYR n 1 58 GLY n 1 59 THR n 1 60 SER n 1 61 LEU n 1 62 THR n 1 63 THR n 1 64 GLY n 1 65 CYS n 1 66 SER n 1 67 GLY n 1 68 LEU n 1 69 LEU n 1 70 PRO n 1 71 GLU n 1 72 ASN n 1 73 TYR n 1 74 ILE n 1 75 THR n 1 76 LYS n 1 77 ALA n 1 78 ASP n 1 79 GLU n 1 80 CYS n 1 81 SER n 1 82 THR n 1 83 TRP n 1 84 ILE n 1 85 PHE n 1 86 HIS n 1 87 GLY n 1 88 SER n 1 89 SER n 1 90 GLY n 1 91 PRO n 1 92 SER n 1 93 SER n 1 94 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene STS1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050704-22 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code STS1_HUMAN _struct_ref.pdbx_db_accession Q8TF42 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SRDIRFANHETLQVIYPYTPQNDDELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITKADECSTWIFHG S ; _struct_ref.pdbx_align_begin 248 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2E5K _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 88 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8TF42 _struct_ref_seq.db_align_beg 248 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 328 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 248 _struct_ref_seq.pdbx_auth_seq_align_end 328 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2E5K GLY A 1 ? UNP Q8TF42 ? ? 'cloning artifact' 241 1 1 2E5K SER A 2 ? UNP Q8TF42 ? ? 'cloning artifact' 242 2 1 2E5K SER A 3 ? UNP Q8TF42 ? ? 'cloning artifact' 243 3 1 2E5K GLY A 4 ? UNP Q8TF42 ? ? 'cloning artifact' 244 4 1 2E5K SER A 5 ? UNP Q8TF42 ? ? 'cloning artifact' 245 5 1 2E5K SER A 6 ? UNP Q8TF42 ? ? 'cloning artifact' 246 6 1 2E5K GLY A 7 ? UNP Q8TF42 ? ? 'cloning artifact' 247 7 1 2E5K SER A 89 ? UNP Q8TF42 ? ? 'cloning artifact' 329 8 1 2E5K GLY A 90 ? UNP Q8TF42 ? ? 'cloning artifact' 330 9 1 2E5K PRO A 91 ? UNP Q8TF42 ? ? 'cloning artifact' 331 10 1 2E5K SER A 92 ? UNP Q8TF42 ? ? 'cloning artifact' 332 11 1 2E5K SER A 93 ? UNP Q8TF42 ? ? 'cloning artifact' 333 12 1 2E5K GLY A 94 ? UNP Q8TF42 ? ? 'cloning artifact' 334 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_13C-separated_NOESY 1 2 1 3D_15N-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.18mM 13C-15N PROTEIN, 20mM d-Tris-HCl(pH7.0), 100mM NaCl, 1mM d-DTT, 0.02% NaN3, 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2E5K _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2E5K _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, structures with the lowest energy, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2E5K _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20060702 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9820 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2E5K _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2E5K _struct.title 'Solution structure of SH3 domain in Suppressor of T-cell receptor signaling 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2E5K _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text ;SH3 domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, PROTEIN BINDING ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id PRO _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 45 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLN _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 48 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id PRO _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 285 _struct_conf.end_auth_comp_id GLN _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 288 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 66 ? PRO A 70 ? SER A 306 PRO A 310 A 2 TRP A 55 ? SER A 60 ? TRP A 295 SER A 300 A 3 PHE A 40 ? MET A 43 ? PHE A 280 MET A 283 A 4 GLU A 17 ? VAL A 21 ? GLU A 257 VAL A 261 A 5 ILE A 74 ? LYS A 76 ? ILE A 314 LYS A 316 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 67 ? O GLY A 307 N GLY A 58 ? N GLY A 298 A 2 3 O THR A 59 ? O THR A 299 N PHE A 42 ? N PHE A 282 A 3 4 O MET A 43 ? O MET A 283 N GLU A 17 ? N GLU A 257 A 4 5 N GLN A 20 ? N GLN A 260 O THR A 75 ? O THR A 315 # _database_PDB_matrix.entry_id 2E5K _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2E5K _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 241 241 GLY GLY A . n A 1 2 SER 2 242 242 SER SER A . n A 1 3 SER 3 243 243 SER SER A . n A 1 4 GLY 4 244 244 GLY GLY A . n A 1 5 SER 5 245 245 SER SER A . n A 1 6 SER 6 246 246 SER SER A . n A 1 7 GLY 7 247 247 GLY GLY A . n A 1 8 SER 8 248 248 SER SER A . n A 1 9 ARG 9 249 249 ARG ARG A . n A 1 10 ASP 10 250 250 ASP ASP A . n A 1 11 ILE 11 251 251 ILE ILE A . n A 1 12 ARG 12 252 252 ARG ARG A . n A 1 13 PHE 13 253 253 PHE PHE A . n A 1 14 ALA 14 254 254 ALA ALA A . n A 1 15 ASN 15 255 255 ASN ASN A . n A 1 16 HIS 16 256 256 HIS HIS A . n A 1 17 GLU 17 257 257 GLU GLU A . n A 1 18 THR 18 258 258 THR THR A . n A 1 19 LEU 19 259 259 LEU LEU A . n A 1 20 GLN 20 260 260 GLN GLN A . n A 1 21 VAL 21 261 261 VAL VAL A . n A 1 22 ILE 22 262 262 ILE ILE A . n A 1 23 TYR 23 263 263 TYR TYR A . n A 1 24 PRO 24 264 264 PRO PRO A . n A 1 25 TYR 25 265 265 TYR TYR A . n A 1 26 THR 26 266 266 THR THR A . n A 1 27 PRO 27 267 267 PRO PRO A . n A 1 28 GLN 28 268 268 GLN GLN A . n A 1 29 ASN 29 269 269 ASN ASN A . n A 1 30 ASP 30 270 270 ASP ASP A . n A 1 31 ASP 31 271 271 ASP ASP A . n A 1 32 GLU 32 272 272 GLU GLU A . n A 1 33 LEU 33 273 273 LEU LEU A . n A 1 34 GLU 34 274 274 GLU GLU A . n A 1 35 LEU 35 275 275 LEU LEU A . n A 1 36 VAL 36 276 276 VAL VAL A . n A 1 37 PRO 37 277 277 PRO PRO A . n A 1 38 GLY 38 278 278 GLY GLY A . n A 1 39 ASP 39 279 279 ASP ASP A . n A 1 40 PHE 40 280 280 PHE PHE A . n A 1 41 ILE 41 281 281 ILE ILE A . n A 1 42 PHE 42 282 282 PHE PHE A . n A 1 43 MET 43 283 283 MET MET A . n A 1 44 SER 44 284 284 SER SER A . n A 1 45 PRO 45 285 285 PRO PRO A . n A 1 46 MET 46 286 286 MET MET A . n A 1 47 GLU 47 287 287 GLU GLU A . n A 1 48 GLN 48 288 288 GLN GLN A . n A 1 49 THR 49 289 289 THR THR A . n A 1 50 SER 50 290 290 SER SER A . n A 1 51 THR 51 291 291 THR THR A . n A 1 52 SER 52 292 292 SER SER A . n A 1 53 GLU 53 293 293 GLU GLU A . n A 1 54 GLY 54 294 294 GLY GLY A . n A 1 55 TRP 55 295 295 TRP TRP A . n A 1 56 ILE 56 296 296 ILE ILE A . n A 1 57 TYR 57 297 297 TYR TYR A . n A 1 58 GLY 58 298 298 GLY GLY A . n A 1 59 THR 59 299 299 THR THR A . n A 1 60 SER 60 300 300 SER SER A . n A 1 61 LEU 61 301 301 LEU LEU A . n A 1 62 THR 62 302 302 THR THR A . n A 1 63 THR 63 303 303 THR THR A . n A 1 64 GLY 64 304 304 GLY GLY A . n A 1 65 CYS 65 305 305 CYS CYS A . n A 1 66 SER 66 306 306 SER SER A . n A 1 67 GLY 67 307 307 GLY GLY A . n A 1 68 LEU 68 308 308 LEU LEU A . n A 1 69 LEU 69 309 309 LEU LEU A . n A 1 70 PRO 70 310 310 PRO PRO A . n A 1 71 GLU 71 311 311 GLU GLU A . n A 1 72 ASN 72 312 312 ASN ASN A . n A 1 73 TYR 73 313 313 TYR TYR A . n A 1 74 ILE 74 314 314 ILE ILE A . n A 1 75 THR 75 315 315 THR THR A . n A 1 76 LYS 76 316 316 LYS LYS A . n A 1 77 ALA 77 317 317 ALA ALA A . n A 1 78 ASP 78 318 318 ASP ASP A . n A 1 79 GLU 79 319 319 GLU GLU A . n A 1 80 CYS 80 320 320 CYS CYS A . n A 1 81 SER 81 321 321 SER SER A . n A 1 82 THR 82 322 322 THR THR A . n A 1 83 TRP 83 323 323 TRP TRP A . n A 1 84 ILE 84 324 324 ILE ILE A . n A 1 85 PHE 85 325 325 PHE PHE A . n A 1 86 HIS 86 326 326 HIS HIS A . n A 1 87 GLY 87 327 327 GLY GLY A . n A 1 88 SER 88 328 328 SER SER A . n A 1 89 SER 89 329 329 SER SER A . n A 1 90 GLY 90 330 330 GLY GLY A . n A 1 91 PRO 91 331 331 PRO PRO A . n A 1 92 SER 92 332 332 SER SER A . n A 1 93 SER 93 333 333 SER SER A . n A 1 94 GLY 94 334 334 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-06-26 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 245 ? ? -56.29 176.70 2 1 ASN A 255 ? ? -106.03 46.12 3 1 ASP A 271 ? ? -37.70 -38.72 4 1 ILE A 324 ? ? -130.09 -31.26 5 1 SER A 328 ? ? -174.13 141.87 6 1 PRO A 331 ? ? -69.76 91.93 7 1 SER A 332 ? ? 37.27 41.77 8 2 ARG A 252 ? ? 38.33 44.85 9 2 ASN A 255 ? ? -77.96 47.28 10 2 GLN A 288 ? ? -69.27 87.08 11 2 SER A 290 ? ? 48.09 26.33 12 2 SER A 292 ? ? -35.36 -36.17 13 2 ALA A 317 ? ? -69.54 92.06 14 2 THR A 322 ? ? -66.60 -176.91 15 2 PHE A 325 ? ? -34.32 143.89 16 2 SER A 329 ? ? 37.58 43.84 17 3 ASP A 250 ? ? -172.56 143.21 18 3 ARG A 252 ? ? 39.30 44.58 19 3 PHE A 253 ? ? 35.69 47.41 20 3 ASN A 255 ? ? -132.54 -53.60 21 3 ASP A 271 ? ? -35.67 -38.47 22 3 SER A 292 ? ? -34.06 -34.33 23 3 ALA A 317 ? ? -55.21 89.35 24 3 ILE A 324 ? ? -125.36 -55.97 25 3 PHE A 325 ? ? -34.36 139.22 26 4 SER A 300 ? ? -50.08 174.14 27 4 ILE A 324 ? ? -129.96 -53.52 28 4 PHE A 325 ? ? -34.90 133.01 29 4 SER A 333 ? ? -52.60 174.28 30 5 GLU A 319 ? ? 34.62 45.70 31 5 CYS A 320 ? ? 34.26 51.04 32 5 SER A 321 ? ? -82.41 -75.06 33 5 THR A 322 ? ? -34.60 145.34 34 6 HIS A 256 ? ? -172.85 142.83 35 6 SER A 290 ? ? 41.79 25.08 36 6 CYS A 320 ? ? -44.13 161.76 37 6 ILE A 324 ? ? -126.89 -51.14 38 6 PHE A 325 ? ? -41.49 156.65 39 7 ARG A 252 ? ? -94.96 35.06 40 7 GLN A 288 ? ? -96.94 52.95 41 7 ILE A 324 ? ? -125.58 -64.92 42 7 PHE A 325 ? ? -34.24 140.37 43 7 PRO A 331 ? ? -69.75 2.16 44 7 SER A 332 ? ? -34.75 115.68 45 8 ARG A 252 ? ? -123.76 -51.34 46 8 HIS A 256 ? ? -38.52 131.43 47 8 ASP A 271 ? ? -35.57 -39.54 48 8 SER A 292 ? ? -37.85 -32.30 49 8 THR A 322 ? ? -34.02 140.28 50 8 ILE A 324 ? ? -119.54 -70.24 51 8 PHE A 325 ? ? -33.76 119.10 52 9 SER A 248 ? ? -38.55 107.10 53 9 ARG A 252 ? ? 39.20 35.71 54 9 SER A 290 ? ? 48.47 29.46 55 9 SER A 292 ? ? -39.90 -38.07 56 9 ALA A 317 ? ? -59.51 94.59 57 9 ILE A 324 ? ? -121.92 -67.12 58 9 PHE A 325 ? ? -36.67 148.17 59 10 SER A 243 ? ? -36.39 103.03 60 10 ARG A 252 ? ? -99.43 52.62 61 10 HIS A 256 ? ? -35.36 140.25 62 10 ASP A 271 ? ? -36.38 -39.49 63 10 ILE A 296 ? ? -160.02 119.36 64 10 ALA A 317 ? ? -66.60 92.64 65 10 PHE A 325 ? ? -34.61 135.96 66 10 SER A 333 ? ? -57.06 100.95 67 11 SER A 245 ? ? -49.56 156.07 68 11 ARG A 252 ? ? -89.70 32.38 69 11 PHE A 253 ? ? 71.20 39.98 70 11 ALA A 254 ? ? -64.03 -178.27 71 11 HIS A 256 ? ? -35.82 131.13 72 11 GLN A 288 ? ? -67.38 92.54 73 11 SER A 292 ? ? -34.41 -37.96 74 11 ALA A 317 ? ? -54.23 93.13 75 11 GLU A 319 ? ? -48.75 101.51 76 11 TRP A 323 ? ? -130.49 -33.99 77 11 SER A 332 ? ? -37.57 102.14 78 11 SER A 333 ? ? -86.65 42.21 79 12 PRO A 285 ? ? -69.76 0.51 80 12 ALA A 317 ? ? -66.20 95.02 81 12 ILE A 324 ? ? -133.84 -54.85 82 12 PHE A 325 ? ? -35.18 135.61 83 13 SER A 246 ? ? -69.52 86.72 84 13 TYR A 265 ? ? -171.77 118.69 85 13 GLN A 288 ? ? -67.98 85.63 86 13 ASP A 318 ? ? -120.59 -53.75 87 13 CYS A 320 ? ? -51.87 176.01 88 13 THR A 322 ? ? -67.00 -179.12 89 13 SER A 329 ? ? -55.17 172.92 90 13 SER A 332 ? ? 37.60 42.19 91 14 ALA A 254 ? ? -88.31 -70.40 92 14 SER A 290 ? ? 45.48 25.06 93 14 SER A 292 ? ? -36.20 -38.50 94 14 ALA A 317 ? ? -60.89 96.68 95 14 ILE A 324 ? ? -121.81 -72.82 96 14 PHE A 325 ? ? -33.99 123.23 97 15 SER A 248 ? ? -130.14 -44.05 98 15 SER A 290 ? ? 48.49 25.41 99 15 ALA A 317 ? ? -52.40 95.44 100 15 GLU A 319 ? ? -67.96 91.77 101 15 SER A 321 ? ? -50.62 179.63 102 15 ILE A 324 ? ? -132.26 -67.44 103 15 PHE A 325 ? ? -34.06 136.63 104 15 SER A 328 ? ? -173.70 148.83 105 16 SER A 242 ? ? -132.12 -47.03 106 16 ARG A 252 ? ? -123.66 -63.35 107 16 PHE A 253 ? ? -104.91 44.00 108 16 HIS A 256 ? ? -37.91 134.29 109 16 GLN A 288 ? ? -58.80 85.62 110 16 SER A 292 ? ? -39.80 -39.57 111 16 ALA A 317 ? ? -61.79 94.03 112 16 ILE A 324 ? ? -127.21 -52.99 113 16 PHE A 325 ? ? -34.80 130.46 114 16 SER A 328 ? ? -111.59 52.29 115 16 SER A 332 ? ? -35.85 132.90 116 17 ARG A 252 ? ? -81.47 41.82 117 17 ASN A 255 ? ? -82.41 44.18 118 17 ASP A 271 ? ? -35.10 -39.80 119 17 SER A 290 ? ? 39.45 31.22 120 17 THR A 303 ? ? -102.12 -65.70 121 17 ALA A 317 ? ? -54.91 92.56 122 17 GLU A 319 ? ? -80.81 43.22 123 17 TRP A 323 ? ? -131.96 -41.52 124 17 PHE A 325 ? ? -34.23 141.58 125 18 ARG A 252 ? ? -97.84 47.51 126 18 ASN A 255 ? ? -84.01 44.07 127 18 ASP A 271 ? ? -37.34 -39.93 128 18 ALA A 317 ? ? -77.32 46.71 129 18 TRP A 323 ? ? -133.66 -45.51 130 18 PHE A 325 ? ? -34.20 138.39 131 18 SER A 333 ? ? -103.85 42.10 132 19 SER A 248 ? ? -35.15 136.02 133 19 ASN A 255 ? ? -108.81 43.96 134 19 SER A 292 ? ? -36.35 -37.03 135 19 ALA A 317 ? ? -66.07 95.64 136 19 ILE A 324 ? ? -130.00 -53.64 137 19 PHE A 325 ? ? -36.23 146.11 138 19 PRO A 331 ? ? -69.74 85.44 139 20 ASN A 255 ? ? -99.59 40.48 140 20 THR A 303 ? ? -100.04 -63.73 141 20 ALA A 317 ? ? -64.39 86.55 142 20 THR A 322 ? ? -48.89 161.50 143 20 ILE A 324 ? ? -130.16 -46.57 144 20 PHE A 325 ? ? -34.51 126.57 #