HEADER TRANSCRIPTION 22-DEC-06 2E5S TITLE SOLUTION STRUCTURE OF THE ZF-CCCHX2 DOMAIN OF MUSCLEBLIND-LIKE 2, TITLE 2 ISOFORM 1 [HOMO SAPIENS] COMPND MOL_ID: 1; COMPND 2 MOLECULE: OTTHUMP00000018578; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ZF-CCCHX2 DOMAIN, RESIDUES 8-98; COMPND 5 SYNONYM: MUSCLEBLIND-LIKE 2, DROSOPHILA, MUSCLEBLIND-LIKE 2, ISOFORM COMPND 6 1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MBNL2; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P060327-05; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS ZF-CCCHX2 DOMAIN, MUSCLEBLIND-LIKE 2, ISOFORM 1, STRUCTURAL GENOMICS, KEYWDS 2 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR W.DANG,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 09-MAR-22 2E5S 1 REMARK SEQADV LINK REVDAT 3 10-FEB-09 2E5S 1 JRNL VERSN REVDAT 2 11-MAR-08 2E5S 1 HEADER VERSN REVDAT 1 26-JUN-07 2E5S 0 JRNL AUTH F.HE,W.DANG,C.ABE,K.TSUDA,M.INOUE,S.WATANABE,N.KOBAYASHI, JRNL AUTH 2 T.KIGAWA,T.MATSUDA,T.YABUKI,M.AOKI,E.SEKI,T.HARADA, JRNL AUTH 3 Y.TOMABECHI,T.TERADA,M.SHIROUZU,A.TANAKA,P.GUNTERT,Y.MUTO, JRNL AUTH 4 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE RNA BINDING DOMAIN IN THE HUMAN JRNL TITL 2 MUSCLEBLIND-LIKE PROTEIN 2 JRNL REF PROTEIN SCI. V. 18 80 2009 JRNL REFN ISSN 0961-8368 JRNL PMID 19177353 JRNL DOI 10.1002/PRO.17 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 2.6, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2E5S COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-DEC-06. REMARK 100 THE DEPOSITION ID IS D_1000026260. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20MM D-TRIS-HCL(PH 7.0); 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; REMARK 210 50UM ZNCL2+1MM IDA; 10% D2O, 90% REMARK 210 H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9814, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 11 133.37 -172.58 REMARK 500 1 ASP A 18 46.29 -90.59 REMARK 500 1 MET A 48 40.98 -89.18 REMARK 500 1 ASN A 54 42.09 73.48 REMARK 500 1 CYS A 72 118.62 -35.51 REMARK 500 1 PRO A 78 -179.84 -69.76 REMARK 500 1 GLN A 82 -38.79 -34.45 REMARK 500 1 GLN A 91 127.01 -37.86 REMARK 500 2 ASP A 18 47.34 -87.10 REMARK 500 2 THR A 47 49.09 -87.81 REMARK 500 2 ASP A 53 -31.70 -130.89 REMARK 500 2 ASN A 54 44.74 74.22 REMARK 500 2 CYS A 59 98.22 -69.06 REMARK 500 2 GLU A 70 95.08 -58.43 REMARK 500 2 PRO A 78 -179.50 -69.77 REMARK 500 2 GLN A 82 -37.92 -35.90 REMARK 500 2 GLN A 91 121.76 -35.51 REMARK 500 2 ASN A 93 42.17 -99.78 REMARK 500 3 SER A 3 138.39 -173.26 REMARK 500 3 ARG A 16 106.28 -41.17 REMARK 500 3 ASP A 18 38.83 -95.59 REMARK 500 3 SER A 46 54.86 36.05 REMARK 500 3 THR A 47 102.83 -35.07 REMARK 500 3 ASN A 54 40.00 73.19 REMARK 500 3 GLU A 70 98.18 -66.43 REMARK 500 3 PRO A 78 -179.64 -69.71 REMARK 500 3 GLN A 82 -38.02 -36.64 REMARK 500 3 LYS A 84 -35.51 -39.39 REMARK 500 3 GLN A 91 97.31 -66.13 REMARK 500 3 ALA A 92 112.60 -164.71 REMARK 500 4 SER A 5 -60.71 -93.14 REMARK 500 4 GLN A 12 42.34 -102.84 REMARK 500 4 SER A 46 42.30 -87.31 REMARK 500 4 MET A 48 34.70 -96.01 REMARK 500 4 GLU A 70 93.35 -50.64 REMARK 500 4 LYS A 71 44.90 73.80 REMARK 500 4 CYS A 72 131.23 -37.26 REMARK 500 4 PRO A 78 -179.62 -69.79 REMARK 500 4 GLN A 82 -35.12 -34.56 REMARK 500 4 GLN A 91 -70.84 -123.96 REMARK 500 4 ALA A 92 100.60 -45.52 REMARK 500 4 ALA A 95 41.49 -94.52 REMARK 500 5 THR A 17 35.05 -82.87 REMARK 500 5 ASP A 18 53.96 -110.40 REMARK 500 5 PRO A 43 87.24 -69.77 REMARK 500 5 THR A 47 46.50 -91.82 REMARK 500 5 ARG A 69 94.81 -42.51 REMARK 500 5 GLU A 70 148.78 -39.86 REMARK 500 5 LYS A 71 38.60 34.89 REMARK 500 5 CYS A 72 109.22 -49.36 REMARK 500 REMARK 500 THIS ENTRY HAS 203 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 23 SG REMARK 620 2 CYS A 31 SG 103.2 REMARK 620 3 CYS A 38 SG 108.6 106.0 REMARK 620 4 HIS A 42 NE2 113.9 115.3 109.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 59 SG REMARK 620 2 CYS A 67 SG 110.2 REMARK 620 3 CYS A 72 SG 105.7 114.5 REMARK 620 4 HIS A 76 NE2 109.7 107.8 109.0 REMARK 620 N 1 2 3 REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSO002001995.2 RELATED DB: TARGETDB DBREF 2E5S A 8 98 UNP Q5VZF2 Q5VZF2_HUMAN 167 257 SEQADV 2E5S GLY A 1 UNP Q5VZF2 EXPRESSION TAG SEQADV 2E5S SER A 2 UNP Q5VZF2 EXPRESSION TAG SEQADV 2E5S SER A 3 UNP Q5VZF2 EXPRESSION TAG SEQADV 2E5S GLY A 4 UNP Q5VZF2 EXPRESSION TAG SEQADV 2E5S SER A 5 UNP Q5VZF2 EXPRESSION TAG SEQADV 2E5S SER A 6 UNP Q5VZF2 EXPRESSION TAG SEQADV 2E5S GLY A 7 UNP Q5VZF2 EXPRESSION TAG SEQRES 1 A 98 GLY SER SER GLY SER SER GLY SER THR ALA THR GLN LYS SEQRES 2 A 98 LEU LEU ARG THR ASP LYS LEU GLU VAL CYS ARG GLU PHE SEQRES 3 A 98 GLN ARG GLY ASN CYS ALA ARG GLY GLU THR ASP CYS ARG SEQRES 4 A 98 PHE ALA HIS PRO ALA ASP SER THR MET ILE ASP THR SER SEQRES 5 A 98 ASP ASN THR VAL THR VAL CYS MET ASP TYR ILE LYS GLY SEQRES 6 A 98 ARG CYS MET ARG GLU LYS CYS LYS TYR PHE HIS PRO PRO SEQRES 7 A 98 ALA HIS LEU GLN ALA LYS ILE LYS ALA ALA GLN HIS GLN SEQRES 8 A 98 ALA ASN GLN ALA ALA VAL ALA HET ZN A 201 1 HET ZN A 401 1 HETNAM ZN ZINC ION FORMUL 2 ZN 2(ZN 2+) HELIX 1 1 GLU A 25 ARG A 28 1 4 HELIX 2 2 GLY A 34 ASP A 37 1 4 HELIX 3 3 MET A 60 LYS A 64 1 5 HELIX 4 4 ALA A 79 GLN A 89 1 11 SHEET 1 A 2 LYS A 19 GLU A 21 0 SHEET 2 A 2 THR A 55 THR A 57 -1 O VAL A 56 N LEU A 20 LINK SG CYS A 23 ZN ZN A 201 1555 1555 2.35 LINK SG CYS A 31 ZN ZN A 201 1555 1555 2.31 LINK SG CYS A 38 ZN ZN A 201 1555 1555 2.35 LINK NE2 HIS A 42 ZN ZN A 201 1555 1555 2.05 LINK SG CYS A 59 ZN ZN A 401 1555 1555 2.35 LINK SG CYS A 67 ZN ZN A 401 1555 1555 2.29 LINK SG CYS A 72 ZN ZN A 401 1555 1555 2.25 LINK NE2 HIS A 76 ZN ZN A 401 1555 1555 2.05 SITE 1 AC1 4 CYS A 23 CYS A 31 CYS A 38 HIS A 42 SITE 1 AC2 4 CYS A 59 CYS A 67 CYS A 72 HIS A 76 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1