data_2E5T
#
_entry.id 2E5T
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.392
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 2E5T pdb_00002e5t 10.2210/pdb2e5t/pdb
RCSB RCSB026261 ? ?
WWPDB D_1000026261 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2007-07-10
2 'Structure model' 1 1 2008-04-30
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2022-03-09
5 'Structure model' 1 4 2024-05-29
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
5 4 'Structure model' 'Derived calculations'
6 5 'Structure model' 'Data collection'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' database_2
2 4 'Structure model' pdbx_nmr_software
3 4 'Structure model' pdbx_struct_assembly
4 4 'Structure model' pdbx_struct_oper_list
5 5 'Structure model' chem_comp_atom
6 5 'Structure model' chem_comp_bond
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_database_2.pdbx_DOI'
2 4 'Structure model' '_database_2.pdbx_database_accession'
3 4 'Structure model' '_pdbx_nmr_software.name'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 2E5T
_pdbx_database_status.recvd_initial_deposition_date 2006-12-22
_pdbx_database_status.deposit_site PDBJ
_pdbx_database_status.process_site PDBJ
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 1AQT 'The same protein form e.coli.' unspecified
PDB 1BSN 'The same protein form e.coli.' unspecified
PDB 2E5U 'C-terminal domain of the same protein' unspecified
PDB 2E5Y 'crystal structure of the same protein in complex with ATP' unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Yagi, H.' 1
'Akutsu, H.' 2
#
_citation.id primary
_citation.title
'Structures of the thermophilic F1-ATPase {varepsilon} subunit suggesting ATP-regulated arm motion of its C-terminal domain in F1'
_citation.journal_abbrev Proc.Natl.Acad.Sci.Usa
_citation.journal_volume 104
_citation.page_first 11233
_citation.page_last 11238
_citation.year 2007
_citation.journal_id_ASTM PNASA6
_citation.country US
_citation.journal_id_ISSN 0027-8424
_citation.journal_id_CSD 0040
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 17581881
_citation.pdbx_database_id_DOI 10.1073/pnas.0701045104
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Yagi, H.' 1 ?
primary 'Kajiwara, N.' 2 ?
primary 'Tanaka, H.' 3 ?
primary 'Tsukihara, T.' 4 ?
primary 'Kato-Yamada, Y.' 5 ?
primary 'Yoshida, M.' 6 ?
primary 'Akutsu, H.' 7 ?
#
_entity.id 1
_entity.type polymer
_entity.src_method man
_entity.pdbx_description 'ATP synthase epsilon chain'
_entity.formula_weight 5382.274
_entity.pdbx_number_of_molecules 1
_entity.pdbx_ec 3.6.3.14
_entity.pdbx_mutation ?
_entity.pdbx_fragment 'C-terminal domain, Residues 88-133'
_entity.details ?
#
_entity_name_com.entity_id 1
_entity_name_com.name 'ATP synthase F1 sector epsilon subunit'
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code IDVLRAKAAKERAERRLQSQQDDIDFKRAELALKRAMNRLSVAEMK
_entity_poly.pdbx_seq_one_letter_code_can IDVLRAKAAKERAERRLQSQQDDIDFKRAELALKRAMNRLSVAEMK
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 ILE n
1 2 ASP n
1 3 VAL n
1 4 LEU n
1 5 ARG n
1 6 ALA n
1 7 LYS n
1 8 ALA n
1 9 ALA n
1 10 LYS n
1 11 GLU n
1 12 ARG n
1 13 ALA n
1 14 GLU n
1 15 ARG n
1 16 ARG n
1 17 LEU n
1 18 GLN n
1 19 SER n
1 20 GLN n
1 21 GLN n
1 22 ASP n
1 23 ASP n
1 24 ILE n
1 25 ASP n
1 26 PHE n
1 27 LYS n
1 28 ARG n
1 29 ALA n
1 30 GLU n
1 31 LEU n
1 32 ALA n
1 33 LEU n
1 34 LYS n
1 35 ARG n
1 36 ALA n
1 37 MET n
1 38 ASN n
1 39 ARG n
1 40 LEU n
1 41 SER n
1 42 VAL n
1 43 ALA n
1 44 GLU n
1 45 MET n
1 46 LYS n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type ?
_entity_src_gen.pdbx_beg_seq_num ?
_entity_src_gen.pdbx_end_seq_num ?
_entity_src_gen.gene_src_common_name ?
_entity_src_gen.gene_src_genus Bacillus
_entity_src_gen.pdbx_gene_src_gene ?
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus sp. PS3'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2334
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562
_entity_src_gen.host_org_genus Escherichia
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain ?
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type plasmid
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name pet32a
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 ILE 1 88 88 ILE ILE A . n
A 1 2 ASP 2 89 89 ASP ASP A . n
A 1 3 VAL 3 90 90 VAL VAL A . n
A 1 4 LEU 4 91 91 LEU LEU A . n
A 1 5 ARG 5 92 92 ARG ARG A . n
A 1 6 ALA 6 93 93 ALA ALA A . n
A 1 7 LYS 7 94 94 LYS LYS A . n
A 1 8 ALA 8 95 95 ALA ALA A . n
A 1 9 ALA 9 96 96 ALA ALA A . n
A 1 10 LYS 10 97 97 LYS LYS A . n
A 1 11 GLU 11 98 98 GLU GLU A . n
A 1 12 ARG 12 99 99 ARG ARG A . n
A 1 13 ALA 13 100 100 ALA ALA A . n
A 1 14 GLU 14 101 101 GLU GLU A . n
A 1 15 ARG 15 102 102 ARG ARG A . n
A 1 16 ARG 16 103 103 ARG ARG A . n
A 1 17 LEU 17 104 104 LEU LEU A . n
A 1 18 GLN 18 105 105 GLN GLN A . n
A 1 19 SER 19 106 106 SER SER A . n
A 1 20 GLN 20 107 107 GLN GLN A . n
A 1 21 GLN 21 108 108 GLN GLN A . n
A 1 22 ASP 22 109 109 ASP ASP A . n
A 1 23 ASP 23 110 110 ASP ASP A . n
A 1 24 ILE 24 111 111 ILE ILE A . n
A 1 25 ASP 25 112 112 ASP ASP A . n
A 1 26 PHE 26 113 113 PHE PHE A . n
A 1 27 LYS 27 114 114 LYS LYS A . n
A 1 28 ARG 28 115 115 ARG ARG A . n
A 1 29 ALA 29 116 116 ALA ALA A . n
A 1 30 GLU 30 117 117 GLU GLU A . n
A 1 31 LEU 31 118 118 LEU LEU A . n
A 1 32 ALA 32 119 119 ALA ALA A . n
A 1 33 LEU 33 120 120 LEU LEU A . n
A 1 34 LYS 34 121 121 LYS LYS A . n
A 1 35 ARG 35 122 122 ARG ARG A . n
A 1 36 ALA 36 123 123 ALA ALA A . n
A 1 37 MET 37 124 124 MET MET A . n
A 1 38 ASN 38 125 125 ASN ASN A . n
A 1 39 ARG 39 126 126 ARG ARG A . n
A 1 40 LEU 40 127 127 LEU LEU A . n
A 1 41 SER 41 128 128 SER SER A . n
A 1 42 VAL 42 129 129 VAL VAL A . n
A 1 43 ALA 43 130 130 ALA ALA A . n
A 1 44 GLU 44 131 131 GLU GLU A . n
A 1 45 MET 45 132 132 MET MET A . n
A 1 46 LYS 46 133 133 LYS LYS A . n
#
_exptl.entry_id 2E5T
_exptl.method 'SOLUTION NMR'
_exptl.crystals_number ?
#
_database_PDB_matrix.entry_id 2E5T
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 2E5T
_struct.title
'C-terminal domain of Epsilon subunit of F1F0-ATP synthase from the Thermophilic bacillus PS3 in the presence of ATP condition'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 2E5T
_struct_keywords.pdbx_keywords HYDROLASE
_struct_keywords.text 'ATP synthase, F1FO ATP synthase, F1-ATPase, EPSILON subunit, ATP, HYDROLASE'
#
_struct_asym.id A
_struct_asym.pdbx_blank_PDB_chainid_flag N
_struct_asym.pdbx_modified N
_struct_asym.entity_id 1
_struct_asym.details ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code ATPE_BACP3
_struct_ref.pdbx_db_accession P07678
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code IDVLRAKARKS-GRTPLQSQQDDIDFKRAELALKRAMNRLSVAEMK
_struct_ref.pdbx_align_begin 88
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 2E5T
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 46
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession P07678
_struct_ref_seq.db_align_beg 88
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 132
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 88
_struct_ref_seq.pdbx_auth_seq_align_end 133
#
loop_
_struct_ref_seq_dif.align_id
_struct_ref_seq_dif.pdbx_pdb_id_code
_struct_ref_seq_dif.mon_id
_struct_ref_seq_dif.pdbx_pdb_strand_id
_struct_ref_seq_dif.seq_num
_struct_ref_seq_dif.pdbx_pdb_ins_code
_struct_ref_seq_dif.pdbx_seq_db_name
_struct_ref_seq_dif.pdbx_seq_db_accession_code
_struct_ref_seq_dif.db_mon_id
_struct_ref_seq_dif.pdbx_seq_db_seq_num
_struct_ref_seq_dif.details
_struct_ref_seq_dif.pdbx_auth_seq_num
_struct_ref_seq_dif.pdbx_ordinal
1 2E5T ALA A 9 ? UNP P07678 ARG 96 'SEE REMARK 999' 96 1
1 2E5T LYS A 10 ? UNP P07678 LYS 97 'SEE REMARK 999' 97 2
1 2E5T GLU A 11 ? UNP P07678 SER 98 'SEE REMARK 999' 98 3
1 2E5T ARG A 12 ? UNP P07678 ? ? 'SEE REMARK 999' 99 4
1 2E5T ALA A 13 ? UNP P07678 GLY 99 'SEE REMARK 999' 100 5
1 2E5T GLU A 14 ? UNP P07678 ARG 100 'SEE REMARK 999' 101 6
1 2E5T ARG A 15 ? UNP P07678 THR 101 'SEE REMARK 999' 102 7
1 2E5T ARG A 16 ? UNP P07678 PRO 102 'SEE REMARK 999' 103 8
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 1 ASP A 2 ? GLN A 18 ? ASP A 89 GLN A 105 1 ? 17
HELX_P HELX_P2 2 ASP A 25 ? MET A 45 ? ASP A 112 MET A 132 1 ? 21
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 ILE A 111 ? ? -95.69 39.68
2 1 MET A 132 ? ? -92.26 42.35
3 2 MET A 132 ? ? -92.23 42.35
4 3 ASP A 109 ? ? -94.03 51.98
5 3 MET A 132 ? ? -92.20 42.30
6 4 ASP A 109 ? ? -96.54 54.44
7 4 MET A 132 ? ? -92.22 42.28
8 5 MET A 132 ? ? -92.23 42.37
9 6 GLN A 108 ? ? -92.14 54.29
10 6 ASP A 109 ? ? -102.88 49.17
11 6 MET A 132 ? ? -92.19 42.35
12 7 ASP A 109 ? ? -91.29 51.78
13 7 MET A 132 ? ? -92.23 42.33
14 8 MET A 132 ? ? -92.24 42.32
15 9 ASP A 109 ? ? -91.81 53.27
16 9 MET A 132 ? ? -92.17 42.34
17 10 MET A 132 ? ? -92.21 42.43
18 11 MET A 132 ? ? -92.17 42.28
19 12 ASP A 109 ? ? -95.53 54.27
20 12 MET A 132 ? ? -92.21 42.39
21 13 MET A 132 ? ? -92.25 42.34
22 14 MET A 132 ? ? -92.23 42.36
23 15 GLN A 108 ? ? -95.12 52.32
24 15 ASP A 109 ? ? -94.35 54.28
25 15 MET A 132 ? ? -92.18 42.42
26 16 GLN A 108 ? ? -96.50 49.04
27 16 ASP A 109 ? ? -94.94 43.56
28 16 MET A 132 ? ? -92.20 42.36
29 17 MET A 132 ? ? -92.18 42.32
30 18 ASP A 109 ? ? -102.19 44.57
31 18 MET A 132 ? ? -92.24 42.37
32 19 ASP A 109 ? ? -99.36 46.08
33 19 MET A 132 ? ? -92.30 42.41
34 20 MET A 132 ? ? -92.18 42.35
#
_pdbx_database_remark.id 999
_pdbx_database_remark.text
;SEQUENCE
These residues are AKERAERR instead of RKSGRTP
according to Kato-Yamada Y., Yoshida M., Hisabori T.
[J.Biol.Chem. 275:35746-35750(2000).].
;
#
_pdbx_nmr_ensemble.entry_id 2E5T
_pdbx_nmr_ensemble.conformers_calculated_total_number 100
_pdbx_nmr_ensemble.conformers_submitted_total_number 20
_pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy'
_pdbx_nmr_ensemble.average_constraints_per_residue ?
_pdbx_nmr_ensemble.average_constraint_violations_per_residue ?
_pdbx_nmr_ensemble.maximum_distance_constraint_violation ?
_pdbx_nmr_ensemble.average_distance_constraint_violation ?
_pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ?
_pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ?
_pdbx_nmr_ensemble.distance_constraint_violation_method ?
_pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ?
_pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ?
_pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ?
#
_pdbx_nmr_representative.entry_id 2E5T
_pdbx_nmr_representative.conformer_id 1
_pdbx_nmr_representative.selection_criteria 'closest to the average'
#
loop_
_pdbx_nmr_sample_details.solution_id
_pdbx_nmr_sample_details.contents
_pdbx_nmr_sample_details.solvent_system
1 '0.5mM TF1 epsilon subunit U-15N, 13C; 50mM phosphate buffer K; 90% H2O, 10% D2O' '90% H2O/10% D2O'
2 '0.5mM TF1 epsilon subunit U-15N; 50mM phosphate buffer K; 90% H2O, 10% D2O' '90% H2O/10% D2O'
#
_pdbx_nmr_exptl_sample_conditions.conditions_id 1
_pdbx_nmr_exptl_sample_conditions.temperature 303
_pdbx_nmr_exptl_sample_conditions.pressure ambient
_pdbx_nmr_exptl_sample_conditions.pH 6.8
_pdbx_nmr_exptl_sample_conditions.ionic_strength '10mM NaCl'
_pdbx_nmr_exptl_sample_conditions.pressure_units .
_pdbx_nmr_exptl_sample_conditions.temperature_units K
#
loop_
_pdbx_nmr_exptl.experiment_id
_pdbx_nmr_exptl.conditions_id
_pdbx_nmr_exptl.type
_pdbx_nmr_exptl.solution_id
1 1 '3D HACACB' 1
2 1 '3D HA(CO)CACB' 1
3 1 '3D HAHBCONH' 1
4 1 '3D H(CCO)NH' 1
5 1 3D_15N-edited_NOESY 2
6 1 3D_13C-edited_NOESY 1
#
_pdbx_nmr_refine.entry_id 2E5T
_pdbx_nmr_refine.method 'torsion angle dynamics'
_pdbx_nmr_refine.details ?
_pdbx_nmr_refine.software_ordinal 1
#
loop_
_pdbx_nmr_software.classification
_pdbx_nmr_software.name
_pdbx_nmr_software.version
_pdbx_nmr_software.authors
_pdbx_nmr_software.ordinal
collection XwinNMR 3.5 Bruker 1
processing NMRPipe 2.3 'Delaglio, F.' 2
'data analysis' Sparky 3.110 Goddard 3
'structure solution' CYANA 1.0.6 'Guentert, P.' 4
refinement CYANA 1.0.6 'Guentert, P.' 5
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
ARG N N N N 14
ARG CA C N S 15
ARG C C N N 16
ARG O O N N 17
ARG CB C N N 18
ARG CG C N N 19
ARG CD C N N 20
ARG NE N N N 21
ARG CZ C N N 22
ARG NH1 N N N 23
ARG NH2 N N N 24
ARG OXT O N N 25
ARG H H N N 26
ARG H2 H N N 27
ARG HA H N N 28
ARG HB2 H N N 29
ARG HB3 H N N 30
ARG HG2 H N N 31
ARG HG3 H N N 32
ARG HD2 H N N 33
ARG HD3 H N N 34
ARG HE H N N 35
ARG HH11 H N N 36
ARG HH12 H N N 37
ARG HH21 H N N 38
ARG HH22 H N N 39
ARG HXT H N N 40
ASN N N N N 41
ASN CA C N S 42
ASN C C N N 43
ASN O O N N 44
ASN CB C N N 45
ASN CG C N N 46
ASN OD1 O N N 47
ASN ND2 N N N 48
ASN OXT O N N 49
ASN H H N N 50
ASN H2 H N N 51
ASN HA H N N 52
ASN HB2 H N N 53
ASN HB3 H N N 54
ASN HD21 H N N 55
ASN HD22 H N N 56
ASN HXT H N N 57
ASP N N N N 58
ASP CA C N S 59
ASP C C N N 60
ASP O O N N 61
ASP CB C N N 62
ASP CG C N N 63
ASP OD1 O N N 64
ASP OD2 O N N 65
ASP OXT O N N 66
ASP H H N N 67
ASP H2 H N N 68
ASP HA H N N 69
ASP HB2 H N N 70
ASP HB3 H N N 71
ASP HD2 H N N 72
ASP HXT H N N 73
GLN N N N N 74
GLN CA C N S 75
GLN C C N N 76
GLN O O N N 77
GLN CB C N N 78
GLN CG C N N 79
GLN CD C N N 80
GLN OE1 O N N 81
GLN NE2 N N N 82
GLN OXT O N N 83
GLN H H N N 84
GLN H2 H N N 85
GLN HA H N N 86
GLN HB2 H N N 87
GLN HB3 H N N 88
GLN HG2 H N N 89
GLN HG3 H N N 90
GLN HE21 H N N 91
GLN HE22 H N N 92
GLN HXT H N N 93
GLU N N N N 94
GLU CA C N S 95
GLU C C N N 96
GLU O O N N 97
GLU CB C N N 98
GLU CG C N N 99
GLU CD C N N 100
GLU OE1 O N N 101
GLU OE2 O N N 102
GLU OXT O N N 103
GLU H H N N 104
GLU H2 H N N 105
GLU HA H N N 106
GLU HB2 H N N 107
GLU HB3 H N N 108
GLU HG2 H N N 109
GLU HG3 H N N 110
GLU HE2 H N N 111
GLU HXT H N N 112
GLY N N N N 113
GLY CA C N N 114
GLY C C N N 115
GLY O O N N 116
GLY OXT O N N 117
GLY H H N N 118
GLY H2 H N N 119
GLY HA2 H N N 120
GLY HA3 H N N 121
GLY HXT H N N 122
ILE N N N N 123
ILE CA C N S 124
ILE C C N N 125
ILE O O N N 126
ILE CB C N S 127
ILE CG1 C N N 128
ILE CG2 C N N 129
ILE CD1 C N N 130
ILE OXT O N N 131
ILE H H N N 132
ILE H2 H N N 133
ILE HA H N N 134
ILE HB H N N 135
ILE HG12 H N N 136
ILE HG13 H N N 137
ILE HG21 H N N 138
ILE HG22 H N N 139
ILE HG23 H N N 140
ILE HD11 H N N 141
ILE HD12 H N N 142
ILE HD13 H N N 143
ILE HXT H N N 144
LEU N N N N 145
LEU CA C N S 146
LEU C C N N 147
LEU O O N N 148
LEU CB C N N 149
LEU CG C N N 150
LEU CD1 C N N 151
LEU CD2 C N N 152
LEU OXT O N N 153
LEU H H N N 154
LEU H2 H N N 155
LEU HA H N N 156
LEU HB2 H N N 157
LEU HB3 H N N 158
LEU HG H N N 159
LEU HD11 H N N 160
LEU HD12 H N N 161
LEU HD13 H N N 162
LEU HD21 H N N 163
LEU HD22 H N N 164
LEU HD23 H N N 165
LEU HXT H N N 166
LYS N N N N 167
LYS CA C N S 168
LYS C C N N 169
LYS O O N N 170
LYS CB C N N 171
LYS CG C N N 172
LYS CD C N N 173
LYS CE C N N 174
LYS NZ N N N 175
LYS OXT O N N 176
LYS H H N N 177
LYS H2 H N N 178
LYS HA H N N 179
LYS HB2 H N N 180
LYS HB3 H N N 181
LYS HG2 H N N 182
LYS HG3 H N N 183
LYS HD2 H N N 184
LYS HD3 H N N 185
LYS HE2 H N N 186
LYS HE3 H N N 187
LYS HZ1 H N N 188
LYS HZ2 H N N 189
LYS HZ3 H N N 190
LYS HXT H N N 191
MET N N N N 192
MET CA C N S 193
MET C C N N 194
MET O O N N 195
MET CB C N N 196
MET CG C N N 197
MET SD S N N 198
MET CE C N N 199
MET OXT O N N 200
MET H H N N 201
MET H2 H N N 202
MET HA H N N 203
MET HB2 H N N 204
MET HB3 H N N 205
MET HG2 H N N 206
MET HG3 H N N 207
MET HE1 H N N 208
MET HE2 H N N 209
MET HE3 H N N 210
MET HXT H N N 211
PHE N N N N 212
PHE CA C N S 213
PHE C C N N 214
PHE O O N N 215
PHE CB C N N 216
PHE CG C Y N 217
PHE CD1 C Y N 218
PHE CD2 C Y N 219
PHE CE1 C Y N 220
PHE CE2 C Y N 221
PHE CZ C Y N 222
PHE OXT O N N 223
PHE H H N N 224
PHE H2 H N N 225
PHE HA H N N 226
PHE HB2 H N N 227
PHE HB3 H N N 228
PHE HD1 H N N 229
PHE HD2 H N N 230
PHE HE1 H N N 231
PHE HE2 H N N 232
PHE HZ H N N 233
PHE HXT H N N 234
PRO N N N N 235
PRO CA C N S 236
PRO C C N N 237
PRO O O N N 238
PRO CB C N N 239
PRO CG C N N 240
PRO CD C N N 241
PRO OXT O N N 242
PRO H H N N 243
PRO HA H N N 244
PRO HB2 H N N 245
PRO HB3 H N N 246
PRO HG2 H N N 247
PRO HG3 H N N 248
PRO HD2 H N N 249
PRO HD3 H N N 250
PRO HXT H N N 251
SER N N N N 252
SER CA C N S 253
SER C C N N 254
SER O O N N 255
SER CB C N N 256
SER OG O N N 257
SER OXT O N N 258
SER H H N N 259
SER H2 H N N 260
SER HA H N N 261
SER HB2 H N N 262
SER HB3 H N N 263
SER HG H N N 264
SER HXT H N N 265
THR N N N N 266
THR CA C N S 267
THR C C N N 268
THR O O N N 269
THR CB C N R 270
THR OG1 O N N 271
THR CG2 C N N 272
THR OXT O N N 273
THR H H N N 274
THR H2 H N N 275
THR HA H N N 276
THR HB H N N 277
THR HG1 H N N 278
THR HG21 H N N 279
THR HG22 H N N 280
THR HG23 H N N 281
THR HXT H N N 282
VAL N N N N 283
VAL CA C N S 284
VAL C C N N 285
VAL O O N N 286
VAL CB C N N 287
VAL CG1 C N N 288
VAL CG2 C N N 289
VAL OXT O N N 290
VAL H H N N 291
VAL H2 H N N 292
VAL HA H N N 293
VAL HB H N N 294
VAL HG11 H N N 295
VAL HG12 H N N 296
VAL HG13 H N N 297
VAL HG21 H N N 298
VAL HG22 H N N 299
VAL HG23 H N N 300
VAL HXT H N N 301
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
ARG N CA sing N N 13
ARG N H sing N N 14
ARG N H2 sing N N 15
ARG CA C sing N N 16
ARG CA CB sing N N 17
ARG CA HA sing N N 18
ARG C O doub N N 19
ARG C OXT sing N N 20
ARG CB CG sing N N 21
ARG CB HB2 sing N N 22
ARG CB HB3 sing N N 23
ARG CG CD sing N N 24
ARG CG HG2 sing N N 25
ARG CG HG3 sing N N 26
ARG CD NE sing N N 27
ARG CD HD2 sing N N 28
ARG CD HD3 sing N N 29
ARG NE CZ sing N N 30
ARG NE HE sing N N 31
ARG CZ NH1 sing N N 32
ARG CZ NH2 doub N N 33
ARG NH1 HH11 sing N N 34
ARG NH1 HH12 sing N N 35
ARG NH2 HH21 sing N N 36
ARG NH2 HH22 sing N N 37
ARG OXT HXT sing N N 38
ASN N CA sing N N 39
ASN N H sing N N 40
ASN N H2 sing N N 41
ASN CA C sing N N 42
ASN CA CB sing N N 43
ASN CA HA sing N N 44
ASN C O doub N N 45
ASN C OXT sing N N 46
ASN CB CG sing N N 47
ASN CB HB2 sing N N 48
ASN CB HB3 sing N N 49
ASN CG OD1 doub N N 50
ASN CG ND2 sing N N 51
ASN ND2 HD21 sing N N 52
ASN ND2 HD22 sing N N 53
ASN OXT HXT sing N N 54
ASP N CA sing N N 55
ASP N H sing N N 56
ASP N H2 sing N N 57
ASP CA C sing N N 58
ASP CA CB sing N N 59
ASP CA HA sing N N 60
ASP C O doub N N 61
ASP C OXT sing N N 62
ASP CB CG sing N N 63
ASP CB HB2 sing N N 64
ASP CB HB3 sing N N 65
ASP CG OD1 doub N N 66
ASP CG OD2 sing N N 67
ASP OD2 HD2 sing N N 68
ASP OXT HXT sing N N 69
GLN N CA sing N N 70
GLN N H sing N N 71
GLN N H2 sing N N 72
GLN CA C sing N N 73
GLN CA CB sing N N 74
GLN CA HA sing N N 75
GLN C O doub N N 76
GLN C OXT sing N N 77
GLN CB CG sing N N 78
GLN CB HB2 sing N N 79
GLN CB HB3 sing N N 80
GLN CG CD sing N N 81
GLN CG HG2 sing N N 82
GLN CG HG3 sing N N 83
GLN CD OE1 doub N N 84
GLN CD NE2 sing N N 85
GLN NE2 HE21 sing N N 86
GLN NE2 HE22 sing N N 87
GLN OXT HXT sing N N 88
GLU N CA sing N N 89
GLU N H sing N N 90
GLU N H2 sing N N 91
GLU CA C sing N N 92
GLU CA CB sing N N 93
GLU CA HA sing N N 94
GLU C O doub N N 95
GLU C OXT sing N N 96
GLU CB CG sing N N 97
GLU CB HB2 sing N N 98
GLU CB HB3 sing N N 99
GLU CG CD sing N N 100
GLU CG HG2 sing N N 101
GLU CG HG3 sing N N 102
GLU CD OE1 doub N N 103
GLU CD OE2 sing N N 104
GLU OE2 HE2 sing N N 105
GLU OXT HXT sing N N 106
GLY N CA sing N N 107
GLY N H sing N N 108
GLY N H2 sing N N 109
GLY CA C sing N N 110
GLY CA HA2 sing N N 111
GLY CA HA3 sing N N 112
GLY C O doub N N 113
GLY C OXT sing N N 114
GLY OXT HXT sing N N 115
ILE N CA sing N N 116
ILE N H sing N N 117
ILE N H2 sing N N 118
ILE CA C sing N N 119
ILE CA CB sing N N 120
ILE CA HA sing N N 121
ILE C O doub N N 122
ILE C OXT sing N N 123
ILE CB CG1 sing N N 124
ILE CB CG2 sing N N 125
ILE CB HB sing N N 126
ILE CG1 CD1 sing N N 127
ILE CG1 HG12 sing N N 128
ILE CG1 HG13 sing N N 129
ILE CG2 HG21 sing N N 130
ILE CG2 HG22 sing N N 131
ILE CG2 HG23 sing N N 132
ILE CD1 HD11 sing N N 133
ILE CD1 HD12 sing N N 134
ILE CD1 HD13 sing N N 135
ILE OXT HXT sing N N 136
LEU N CA sing N N 137
LEU N H sing N N 138
LEU N H2 sing N N 139
LEU CA C sing N N 140
LEU CA CB sing N N 141
LEU CA HA sing N N 142
LEU C O doub N N 143
LEU C OXT sing N N 144
LEU CB CG sing N N 145
LEU CB HB2 sing N N 146
LEU CB HB3 sing N N 147
LEU CG CD1 sing N N 148
LEU CG CD2 sing N N 149
LEU CG HG sing N N 150
LEU CD1 HD11 sing N N 151
LEU CD1 HD12 sing N N 152
LEU CD1 HD13 sing N N 153
LEU CD2 HD21 sing N N 154
LEU CD2 HD22 sing N N 155
LEU CD2 HD23 sing N N 156
LEU OXT HXT sing N N 157
LYS N CA sing N N 158
LYS N H sing N N 159
LYS N H2 sing N N 160
LYS CA C sing N N 161
LYS CA CB sing N N 162
LYS CA HA sing N N 163
LYS C O doub N N 164
LYS C OXT sing N N 165
LYS CB CG sing N N 166
LYS CB HB2 sing N N 167
LYS CB HB3 sing N N 168
LYS CG CD sing N N 169
LYS CG HG2 sing N N 170
LYS CG HG3 sing N N 171
LYS CD CE sing N N 172
LYS CD HD2 sing N N 173
LYS CD HD3 sing N N 174
LYS CE NZ sing N N 175
LYS CE HE2 sing N N 176
LYS CE HE3 sing N N 177
LYS NZ HZ1 sing N N 178
LYS NZ HZ2 sing N N 179
LYS NZ HZ3 sing N N 180
LYS OXT HXT sing N N 181
MET N CA sing N N 182
MET N H sing N N 183
MET N H2 sing N N 184
MET CA C sing N N 185
MET CA CB sing N N 186
MET CA HA sing N N 187
MET C O doub N N 188
MET C OXT sing N N 189
MET CB CG sing N N 190
MET CB HB2 sing N N 191
MET CB HB3 sing N N 192
MET CG SD sing N N 193
MET CG HG2 sing N N 194
MET CG HG3 sing N N 195
MET SD CE sing N N 196
MET CE HE1 sing N N 197
MET CE HE2 sing N N 198
MET CE HE3 sing N N 199
MET OXT HXT sing N N 200
PHE N CA sing N N 201
PHE N H sing N N 202
PHE N H2 sing N N 203
PHE CA C sing N N 204
PHE CA CB sing N N 205
PHE CA HA sing N N 206
PHE C O doub N N 207
PHE C OXT sing N N 208
PHE CB CG sing N N 209
PHE CB HB2 sing N N 210
PHE CB HB3 sing N N 211
PHE CG CD1 doub Y N 212
PHE CG CD2 sing Y N 213
PHE CD1 CE1 sing Y N 214
PHE CD1 HD1 sing N N 215
PHE CD2 CE2 doub Y N 216
PHE CD2 HD2 sing N N 217
PHE CE1 CZ doub Y N 218
PHE CE1 HE1 sing N N 219
PHE CE2 CZ sing Y N 220
PHE CE2 HE2 sing N N 221
PHE CZ HZ sing N N 222
PHE OXT HXT sing N N 223
PRO N CA sing N N 224
PRO N CD sing N N 225
PRO N H sing N N 226
PRO CA C sing N N 227
PRO CA CB sing N N 228
PRO CA HA sing N N 229
PRO C O doub N N 230
PRO C OXT sing N N 231
PRO CB CG sing N N 232
PRO CB HB2 sing N N 233
PRO CB HB3 sing N N 234
PRO CG CD sing N N 235
PRO CG HG2 sing N N 236
PRO CG HG3 sing N N 237
PRO CD HD2 sing N N 238
PRO CD HD3 sing N N 239
PRO OXT HXT sing N N 240
SER N CA sing N N 241
SER N H sing N N 242
SER N H2 sing N N 243
SER CA C sing N N 244
SER CA CB sing N N 245
SER CA HA sing N N 246
SER C O doub N N 247
SER C OXT sing N N 248
SER CB OG sing N N 249
SER CB HB2 sing N N 250
SER CB HB3 sing N N 251
SER OG HG sing N N 252
SER OXT HXT sing N N 253
THR N CA sing N N 254
THR N H sing N N 255
THR N H2 sing N N 256
THR CA C sing N N 257
THR CA CB sing N N 258
THR CA HA sing N N 259
THR C O doub N N 260
THR C OXT sing N N 261
THR CB OG1 sing N N 262
THR CB CG2 sing N N 263
THR CB HB sing N N 264
THR OG1 HG1 sing N N 265
THR CG2 HG21 sing N N 266
THR CG2 HG22 sing N N 267
THR CG2 HG23 sing N N 268
THR OXT HXT sing N N 269
VAL N CA sing N N 270
VAL N H sing N N 271
VAL N H2 sing N N 272
VAL CA C sing N N 273
VAL CA CB sing N N 274
VAL CA HA sing N N 275
VAL C O doub N N 276
VAL C OXT sing N N 277
VAL CB CG1 sing N N 278
VAL CB CG2 sing N N 279
VAL CB HB sing N N 280
VAL CG1 HG11 sing N N 281
VAL CG1 HG12 sing N N 282
VAL CG1 HG13 sing N N 283
VAL CG2 HG21 sing N N 284
VAL CG2 HG22 sing N N 285
VAL CG2 HG23 sing N N 286
VAL OXT HXT sing N N 287
#
loop_
_pdbx_nmr_spectrometer.spectrometer_id
_pdbx_nmr_spectrometer.model
_pdbx_nmr_spectrometer.manufacturer
_pdbx_nmr_spectrometer.field_strength
_pdbx_nmr_spectrometer.type
1 DRX Bruker 500 ?
2 DRX Bruker 600 ?
#
_atom_sites.entry_id 2E5T
_atom_sites.fract_transf_matrix[1][1] 1.000000
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 1.000000
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 1.000000
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
H
N
O
S
#
loop_