data_2E6P # _entry.id 2E6P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2E6P pdb_00002e6p 10.2210/pdb2e6p/pdb RCSB RCSB026293 ? ? WWPDB D_1000026293 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk002100640.6 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2E6P _pdbx_database_status.recvd_initial_deposition_date 2006-12-28 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Qin, X.R.' 1 'Suetake, T.' 2 'Hayashi, F.' 3 'Yokoyama, S.' 4 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 5 # _citation.id primary _citation.title 'Solution structure of the Ig-like domain (714-804) from human Obscurin-like protein 1' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Qin, X.R.' 1 ? primary 'Suetake, T.' 2 ? primary 'Hayashi, F.' 3 ? primary 'Yokoyama, S.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Obscurin-like protein 1' _entity.formula_weight 11257.560 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'Ig-like domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'KIAA0657 protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFPATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEF ECRTEGVSAFFGVTVQDPSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFPATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEF ECRTEGVSAFFGVTVQDPSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk002100640.6 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 PRO n 1 9 VAL n 1 10 HIS n 1 11 ILE n 1 12 LEU n 1 13 SER n 1 14 PRO n 1 15 GLN n 1 16 ASP n 1 17 LYS n 1 18 VAL n 1 19 SER n 1 20 LEU n 1 21 THR n 1 22 PHE n 1 23 THR n 1 24 THR n 1 25 SER n 1 26 GLU n 1 27 ARG n 1 28 VAL n 1 29 VAL n 1 30 LEU n 1 31 THR n 1 32 CYS n 1 33 GLU n 1 34 LEU n 1 35 SER n 1 36 ARG n 1 37 VAL n 1 38 ASP n 1 39 PHE n 1 40 PRO n 1 41 ALA n 1 42 THR n 1 43 TRP n 1 44 TYR n 1 45 LYS n 1 46 ASP n 1 47 GLY n 1 48 GLN n 1 49 LYS n 1 50 VAL n 1 51 GLU n 1 52 GLU n 1 53 SER n 1 54 GLU n 1 55 LEU n 1 56 LEU n 1 57 VAL n 1 58 VAL n 1 59 LYS n 1 60 MET n 1 61 ASP n 1 62 GLY n 1 63 ARG n 1 64 LYS n 1 65 HIS n 1 66 ARG n 1 67 LEU n 1 68 ILE n 1 69 LEU n 1 70 PRO n 1 71 GLU n 1 72 ALA n 1 73 LYS n 1 74 VAL n 1 75 GLN n 1 76 ASP n 1 77 SER n 1 78 GLY n 1 79 GLU n 1 80 PHE n 1 81 GLU n 1 82 CYS n 1 83 ARG n 1 84 THR n 1 85 GLU n 1 86 GLY n 1 87 VAL n 1 88 SER n 1 89 ALA n 1 90 PHE n 1 91 PHE n 1 92 GLY n 1 93 VAL n 1 94 THR n 1 95 VAL n 1 96 GLN n 1 97 ASP n 1 98 PRO n 1 99 SER n 1 100 GLY n 1 101 PRO n 1 102 SER n 1 103 SER n 1 104 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'OBSL1, KIAA0657' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050919-02 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'cell free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code OBSL1_HUMAN _struct_ref.pdbx_db_accession O75147 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PVHILSPQDKVSLTFTTSERVVLTCELSRVDFPATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGV SAFFGVTVQDP ; _struct_ref.pdbx_align_begin 714 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2E6P _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 98 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O75147 _struct_ref_seq.db_align_beg 714 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 804 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 98 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2E6P GLY A 1 ? UNP O75147 ? ? 'cloning artifact' 1 1 1 2E6P SER A 2 ? UNP O75147 ? ? 'cloning artifact' 2 2 1 2E6P SER A 3 ? UNP O75147 ? ? 'cloning artifact' 3 3 1 2E6P GLY A 4 ? UNP O75147 ? ? 'cloning artifact' 4 4 1 2E6P SER A 5 ? UNP O75147 ? ? 'cloning artifact' 5 5 1 2E6P SER A 6 ? UNP O75147 ? ? 'cloning artifact' 6 6 1 2E6P GLY A 7 ? UNP O75147 ? ? 'cloning artifact' 7 7 1 2E6P SER A 99 ? UNP O75147 ? ? 'cloning artifact' 99 8 1 2E6P GLY A 100 ? UNP O75147 ? ? 'cloning artifact' 100 9 1 2E6P PRO A 101 ? UNP O75147 ? ? 'cloning artifact' 101 10 1 2E6P SER A 102 ? UNP O75147 ? ? 'cloning artifact' 102 11 1 2E6P SER A 103 ? UNP O75147 ? ? 'cloning artifact' 103 12 1 2E6P GLY A 104 ? UNP O75147 ? ? 'cloning artifact' 104 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.17mM 13C, 15N-labeled protein; 20mM d-Tris-HCl(pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2E6P _pdbx_nmr_refine.method 'Torsion angle dynamic' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2E6P _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, structures with the lowest energy, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2E6P _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection VNMR 6.1C Varian 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9816 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2E6P _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2E6P _struct.title 'Solution structure of the Ig-like domain (714-804) from human Obscurin-like protein 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2E6P _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' _struct_keywords.text ;Ig-like domain, Obscurin-like protein 1, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, STRUCTURAL PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 1 -0.01 2 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 2 0.01 3 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 3 -0.06 4 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 4 -0.02 5 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 5 -0.07 6 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 6 -0.01 7 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 7 -0.05 8 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 8 0.00 9 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 9 -0.06 10 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 10 0.00 11 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 11 -0.01 12 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 12 0.07 13 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 13 -0.04 14 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 14 0.02 15 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 15 -0.02 16 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 16 0.00 17 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 17 -0.14 18 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 18 -0.02 19 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 19 -0.09 20 SER 13 A . ? SER 13 A PRO 14 A ? PRO 14 A 20 -0.03 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 3 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 18 ? THR A 23 ? VAL A 18 THR A 23 A 2 PHE A 91 ? GLN A 96 ? PHE A 91 GLN A 96 A 3 GLY A 78 ? ARG A 83 ? GLY A 78 ARG A 83 A 4 THR A 42 ? LYS A 45 ? THR A 42 LYS A 45 A 5 GLN A 48 ? LYS A 49 ? GLN A 48 LYS A 49 B 1 VAL A 28 ? VAL A 29 ? VAL A 28 VAL A 29 B 2 LYS A 64 ? LEU A 69 ? LYS A 64 LEU A 69 B 3 CYS A 32 ? GLU A 33 ? CYS A 32 GLU A 33 C 1 VAL A 28 ? VAL A 29 ? VAL A 28 VAL A 29 C 2 LYS A 64 ? LEU A 69 ? LYS A 64 LEU A 69 C 3 VAL A 57 ? ASP A 61 ? VAL A 57 ASP A 61 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 22 ? N PHE A 22 O THR A 94 ? O THR A 94 A 2 3 O PHE A 91 ? O PHE A 91 N PHE A 80 ? N PHE A 80 A 3 4 O ARG A 83 ? O ARG A 83 N THR A 42 ? N THR A 42 A 4 5 N LYS A 45 ? N LYS A 45 O GLN A 48 ? O GLN A 48 B 1 2 N VAL A 28 ? N VAL A 28 O LEU A 69 ? O LEU A 69 B 2 3 O HIS A 65 ? O HIS A 65 N CYS A 32 ? N CYS A 32 C 1 2 N VAL A 28 ? N VAL A 28 O LEU A 69 ? O LEU A 69 C 2 3 O LYS A 64 ? O LYS A 64 N ASP A 61 ? N ASP A 61 # _database_PDB_matrix.entry_id 2E6P _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2E6P _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 HIS 10 10 10 HIS HIS A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 GLN 15 15 15 GLN GLN A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 PHE 22 22 22 PHE PHE A . n A 1 23 THR 23 23 23 THR THR A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 CYS 32 32 32 CYS CYS A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 ARG 36 36 36 ARG ARG A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 PHE 39 39 39 PHE PHE A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 THR 42 42 42 THR THR A . n A 1 43 TRP 43 43 43 TRP TRP A . n A 1 44 TYR 44 44 44 TYR TYR A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 GLN 48 48 48 GLN GLN A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 MET 60 60 60 MET MET A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 HIS 65 65 65 HIS HIS A . n A 1 66 ARG 66 66 66 ARG ARG A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 GLN 75 75 75 GLN GLN A . n A 1 76 ASP 76 76 76 ASP ASP A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 PHE 80 80 80 PHE PHE A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 CYS 82 82 82 CYS CYS A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 THR 84 84 84 THR THR A . n A 1 85 GLU 85 85 85 GLU GLU A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 PHE 90 90 90 PHE PHE A . n A 1 91 PHE 91 91 91 PHE PHE A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 THR 94 94 94 THR THR A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 GLN 96 96 96 GLN GLN A . n A 1 97 ASP 97 97 97 ASP ASP A . n A 1 98 PRO 98 98 98 PRO PRO A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 PRO 101 101 101 PRO PRO A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 SER 103 103 103 SER SER A . n A 1 104 GLY 104 104 104 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-07-03 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 53 ? ? -171.26 -175.06 2 1 PRO A 101 ? ? -69.71 84.87 3 1 SER A 102 ? ? 37.45 42.78 4 2 SER A 3 ? ? -69.55 94.36 5 2 ARG A 63 ? ? -91.13 41.49 6 2 CYS A 82 ? ? -105.21 78.25 7 2 SER A 99 ? ? 34.61 50.13 8 3 VAL A 9 ? ? -172.16 124.44 9 3 PRO A 14 ? ? -69.75 -175.72 10 3 ARG A 36 ? ? -160.44 115.33 11 3 SER A 77 ? ? -66.66 99.19 12 3 THR A 84 ? ? -132.32 -75.49 13 4 SER A 5 ? ? -39.17 119.55 14 4 PRO A 14 ? ? -69.75 -168.35 15 4 ASP A 38 ? ? 35.54 38.44 16 4 SER A 102 ? ? -46.68 108.23 17 5 SER A 2 ? ? -128.29 -59.94 18 5 SER A 3 ? ? -65.63 91.80 19 5 SER A 77 ? ? -57.52 103.44 20 5 PRO A 101 ? ? -69.74 1.08 21 6 ARG A 36 ? ? -161.21 118.94 22 6 ALA A 41 ? ? -172.69 149.94 23 6 GLU A 85 ? ? -66.42 76.79 24 7 LYS A 17 ? ? -35.43 130.01 25 7 ARG A 63 ? ? 33.94 42.39 26 7 THR A 84 ? ? -128.43 -75.03 27 8 PRO A 14 ? ? -69.75 -178.11 28 8 ASP A 61 ? ? -112.96 77.20 29 8 SER A 77 ? ? -69.08 90.16 30 8 GLU A 85 ? ? -66.06 80.29 31 8 PRO A 98 ? ? -69.81 -169.72 32 8 PRO A 101 ? ? -69.76 1.52 33 9 SER A 2 ? ? -43.73 152.10 34 9 PRO A 14 ? ? -69.71 -178.27 35 9 SER A 77 ? ? -48.46 103.76 36 9 GLU A 85 ? ? -65.69 79.04 37 10 SER A 5 ? ? -34.94 144.79 38 10 PRO A 14 ? ? -69.77 -174.02 39 10 CYS A 82 ? ? -114.72 78.24 40 10 THR A 84 ? ? -116.22 -74.30 41 10 SER A 103 ? ? -132.74 -49.60 42 11 PRO A 14 ? ? -69.74 -176.16 43 11 ASP A 61 ? ? -100.16 75.67 44 11 THR A 84 ? ? -135.00 -75.12 45 12 PRO A 14 ? ? -69.82 -169.89 46 12 THR A 24 ? ? -46.13 156.14 47 12 GLU A 85 ? ? -69.47 77.45 48 13 SER A 25 ? ? 72.67 44.60 49 13 PRO A 98 ? ? -69.84 91.08 50 14 VAL A 9 ? ? -163.53 118.78 51 14 PRO A 14 ? ? -69.82 -173.84 52 14 ASP A 16 ? ? -134.04 -70.79 53 14 ASP A 61 ? ? -114.81 76.24 54 14 THR A 84 ? ? -112.68 -75.59 55 14 GLU A 85 ? ? -123.16 -71.94 56 14 PRO A 98 ? ? -69.79 -171.09 57 15 SER A 2 ? ? -58.54 80.64 58 15 PRO A 14 ? ? -69.75 -168.54 59 15 LYS A 17 ? ? -34.15 128.88 60 15 SER A 25 ? ? 73.67 46.49 61 15 ASP A 38 ? ? 49.55 25.82 62 15 ASP A 46 ? ? 39.76 25.03 63 15 ASP A 61 ? ? -104.67 61.81 64 15 CYS A 82 ? ? -100.40 74.12 65 15 GLU A 85 ? ? -66.19 73.46 66 15 PRO A 101 ? ? -69.74 2.87 67 16 SER A 25 ? ? 74.17 36.53 68 16 ALA A 41 ? ? -174.25 149.75 69 16 ASP A 61 ? ? -104.27 59.70 70 16 THR A 84 ? ? -130.45 -77.28 71 16 PRO A 101 ? ? -69.78 2.70 72 16 SER A 102 ? ? -36.37 122.07 73 17 PRO A 14 ? ? -69.69 -178.55 74 17 ALA A 41 ? ? -171.63 -178.48 75 17 THR A 84 ? ? -92.88 -75.63 76 18 SER A 3 ? ? -49.81 162.10 77 18 PRO A 14 ? ? -69.78 -168.99 78 18 ASP A 16 ? ? -134.34 -70.95 79 18 ASP A 46 ? ? 41.31 25.01 80 18 ARG A 63 ? ? -87.98 40.73 81 18 CYS A 82 ? ? -102.54 79.39 82 18 GLU A 85 ? ? -62.64 76.94 83 18 PRO A 98 ? ? -69.74 -179.67 84 18 SER A 102 ? ? -174.60 128.10 85 19 PRO A 14 ? ? -69.80 -171.47 86 19 LYS A 17 ? ? -34.58 129.55 87 19 LYS A 49 ? ? -37.28 143.26 88 19 ARG A 63 ? ? -97.50 45.74 89 19 THR A 84 ? ? -115.91 -74.61 90 19 GLU A 85 ? ? -120.43 -60.10 91 19 SER A 99 ? ? -87.83 44.10 92 20 ASP A 46 ? ? 40.18 24.96 93 20 ARG A 63 ? ? -108.67 43.53 94 20 THR A 84 ? ? -131.83 -75.74 95 20 PRO A 98 ? ? -69.76 -173.52 #