HEADER TRANSCRIPTION 05-JAN-07 2E6Z TITLE SOLUTION STRUCTURE OF THE SECOND KOW MOTIF OF HUMAN TRANSCRIPTION TITLE 2 ELONGATION FACTOR SPT5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION ELONGATION FACTOR SPT5; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KOW MOTIF; COMPND 5 SYNONYM: HSPT5, DRB SENSITIVITY-INDUCING FACTOR LARGE SUBUNIT, DSIF COMPND 6 LARGE SUBUNIT, DSIF P160, TAT-COTRANSACTIVATOR 1 PROTEIN, TAT-CT1 COMPND 7 PROTEIN; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SUPT5H, SPT5, SPT5H; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P060123-32; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS KOW MOTIF, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 2 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR W.TANABE,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2E6Z 1 REMARK SEQADV REVDAT 2 24-FEB-09 2E6Z 1 VERSN REVDAT 1 10-JUL-07 2E6Z 0 JRNL AUTH W.TANABE,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, JRNL AUTH 2 M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE SECOND KOW MOTIF OF HUMAN JRNL TITL 2 TRANSCRIPTION ELONGATION FACTOR SPT5 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2E6Z COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1000026303. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 280 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.11MM 13C-15N PROTEIN; 20MM D REMARK 210 -TRIS-HCL(PH7.0); 100MM NACL; REMARK 210 1MM D-DTT; 0.02% NAN3; 90% H2O, REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9742, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 2 ILE A 434 155.34 -41.63 REMARK 500 3 SER A 415 107.43 -41.30 REMARK 500 3 LEU A 433 39.99 -86.23 REMARK 500 5 LYS A 453 79.93 -109.82 REMARK 500 6 SER A 417 75.95 -108.85 REMARK 500 6 LEU A 433 38.65 -85.96 REMARK 500 7 SER A 417 135.58 -37.21 REMARK 500 7 GLU A 432 -33.07 -35.13 REMARK 500 7 LEU A 433 38.28 -84.77 REMARK 500 8 LEU A 433 38.87 -82.52 REMARK 500 8 LYS A 458 -57.12 -121.56 REMARK 500 9 ASN A 435 28.63 44.96 REMARK 500 9 LYS A 458 44.05 -84.09 REMARK 500 10 LEU A 433 31.92 -91.48 REMARK 500 10 ALA A 465 -25.36 -39.74 REMARK 500 11 SER A 417 63.39 -101.19 REMARK 500 11 LEU A 433 31.02 -91.68 REMARK 500 12 GLU A 432 -34.85 -34.87 REMARK 500 12 LEU A 433 39.66 -87.47 REMARK 500 12 LYS A 470 38.18 -83.48 REMARK 500 13 PHE A 420 161.60 -47.71 REMARK 500 13 LYS A 458 -60.41 -98.19 REMARK 500 16 SER A 415 42.80 -100.38 REMARK 500 16 LEU A 433 43.80 -94.82 REMARK 500 17 LYS A 458 46.10 -106.55 REMARK 500 18 LEU A 433 42.70 -83.74 REMARK 500 18 LYS A 458 45.41 -83.75 REMARK 500 19 SER A 417 103.92 -38.62 REMARK 500 19 LEU A 433 40.18 -95.38 REMARK 500 19 THR A 449 99.66 -68.91 REMARK 500 19 LEU A 457 149.52 -34.59 REMARK 500 20 ASP A 424 173.12 -52.95 REMARK 500 20 ILE A 434 145.78 -40.00 REMARK 500 20 LEU A 457 104.17 -48.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK003001095.2 RELATED DB: TARGETDB DBREF 2E6Z A 420 471 UNP O00267 SPT5H_HUMAN 420 471 SEQADV 2E6Z GLY A 413 UNP O00267 CLONING ARTIFACT SEQADV 2E6Z SER A 414 UNP O00267 CLONING ARTIFACT SEQADV 2E6Z SER A 415 UNP O00267 CLONING ARTIFACT SEQADV 2E6Z GLY A 416 UNP O00267 CLONING ARTIFACT SEQADV 2E6Z SER A 417 UNP O00267 CLONING ARTIFACT SEQADV 2E6Z SER A 418 UNP O00267 CLONING ARTIFACT SEQADV 2E6Z GLY A 419 UNP O00267 CLONING ARTIFACT SEQRES 1 A 59 GLY SER SER GLY SER SER GLY PHE GLN PRO GLY ASP ASN SEQRES 2 A 59 VAL GLU VAL CYS GLU GLY GLU LEU ILE ASN LEU GLN GLY SEQRES 3 A 59 LYS ILE LEU SER VAL ASP GLY ASN LYS ILE THR ILE MET SEQRES 4 A 59 PRO LYS HIS GLU ASP LEU LYS ASP MET LEU GLU PHE PRO SEQRES 5 A 59 ALA GLN GLU LEU ARG LYS TYR SHEET 1 A 5 LEU A 461 PRO A 464 0 SHEET 2 A 5 LYS A 447 PRO A 452 -1 N ILE A 448 O PHE A 463 SHEET 3 A 5 LEU A 436 ASP A 444 -1 N LYS A 439 O MET A 451 SHEET 4 A 5 ASN A 425 VAL A 428 -1 N VAL A 426 O GLY A 438 SHEET 5 A 5 LEU A 468 LYS A 470 -1 O ARG A 469 N GLU A 427 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1