data_2E9Z # _entry.id 2E9Z # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2E9Z pdb_00002e9z 10.2210/pdb2e9z/pdb NDB PR0264 ? ? RCSB RCSB026411 ? ? WWPDB D_1000026411 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1U09 'Foot-and-Mouth disease Virus RNA-dependent RNA polymerase' unspecified PDB 1WNE 'Foot-and-Mouth disease Virus RNA-dependent RNA-polymerase in complex with a template-primer RNA' unspecified PDB 2D7S 'Foot-and-Mouth disease Virus RNA-dependent RNA-polymerase in complex with a protein- primer VPg' unspecified PDB 2F8E 'Foot-and-Mouth disease Virus RNA-dependent RNA-polymerase in complex with a protein- primer VPg uridylated' unspecified PDB 2E9R . unspecified PDB 2E9T . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2E9Z _pdbx_database_status.recvd_initial_deposition_date 2007-01-29 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ferrer-Orta, C.' 1 'Arias, A.' 2 'Perez-Luque, R.' 3 'Escarmis, C.' 4 'Domingo, E.' 5 'Verdaguer, N.' 6 # _citation.id primary _citation.title 'Sequential structures provide insights into the fidelity of RNA replication' _citation.journal_abbrev Proc.Natl.Acad.Sci.Usa _citation.journal_volume 104 _citation.page_first 9463 _citation.page_last 9468 _citation.year 2007 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17517631 _citation.pdbx_database_id_DOI 10.1073/pnas.0700518104 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ferrer-Orta, C.' 1 ? primary 'Arias, A.' 2 ? primary 'Perez-Luque, R.' 3 ? primary 'Escarmis, C.' 4 ? primary 'Domingo, E.' 5 ? primary 'Verdaguer, N.' 6 ? # _cell.entry_id 2E9Z _cell.length_a 94.110 _cell.length_b 94.110 _cell.length_c 99.362 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2E9Z _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-R(*CP*AP*UP*GP*GP*GP*CP*CP*C)-3'" 2846.759 1 ? ? ? 'RNA template' 2 polymer syn "5'-R(*GP*GP*GP*CP*CP*CP*A)-3'" 2235.411 1 ? ? ? 'RNA primer' 3 polymer man 'RNA-dependent RNA polymerase' 53486.684 1 2.7.7.48 ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 5 non-polymer syn ;URIDINE 5'-TRIPHOSPHATE ; 484.141 1 ? ? ? ? 6 non-polymer syn PYROPHOSPHATE 177.975 1 ? ? ? ? 7 water nat water 18.015 20 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no CAUGGGCCC CAUGGGCCC B ? 2 polyribonucleotide no no GGGCCCA GGGCCCA C ? 3 'polypeptide(L)' no no ;GLIVDTRDVEERVHVMRKTKLAPTVAHGVFNPEFGPAALSNKDPRLNEGVVLDEVIFSKHKGDTKMSAEDKALFRRCAAD YASRLHSVLGTANAPLSIYEAIKGVDGLDAMEPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQ TFLKDEIRPMEKVRAGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPDVDWQRFGTHFAQYRNVWDVD YSAFDANHCSDAMNIMFEEVFRTEFGFHPNAEWILKTLVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALR RHYEGVELDTYTMISYGDDIVVASDYDLDFEALKPHFKSLGQTITPADKSDKGFVLGHSITDVTFLKRHFHMDYGTGFYK PVMASKTLEAILSFARRGTIQEKLISVAGLAVHSGPDEYRRLFEPFQGLFEIPSYRSLYLRWVNAVCGDAAALEHH ; ;GLIVDTRDVEERVHVMRKTKLAPTVAHGVFNPEFGPAALSNKDPRLNEGVVLDEVIFSKHKGDTKMSAEDKALFRRCAAD YASRLHSVLGTANAPLSIYEAIKGVDGLDAMEPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQ TFLKDEIRPMEKVRAGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPDVDWQRFGTHFAQYRNVWDVD YSAFDANHCSDAMNIMFEEVFRTEFGFHPNAEWILKTLVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALR RHYEGVELDTYTMISYGDDIVVASDYDLDFEALKPHFKSLGQTITPADKSDKGFVLGHSITDVTFLKRHFHMDYGTGFYK PVMASKTLEAILSFARRGTIQEKLISVAGLAVHSGPDEYRRLFEPFQGLFEIPSYRSLYLRWVNAVCGDAAALEHH ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 A n 1 3 U n 1 4 G n 1 5 G n 1 6 G n 1 7 C n 1 8 C n 1 9 C n 2 1 G n 2 2 G n 2 3 G n 2 4 C n 2 5 C n 2 6 C n 2 7 A n 3 1 GLY n 3 2 LEU n 3 3 ILE n 3 4 VAL n 3 5 ASP n 3 6 THR n 3 7 ARG n 3 8 ASP n 3 9 VAL n 3 10 GLU n 3 11 GLU n 3 12 ARG n 3 13 VAL n 3 14 HIS n 3 15 VAL n 3 16 MET n 3 17 ARG n 3 18 LYS n 3 19 THR n 3 20 LYS n 3 21 LEU n 3 22 ALA n 3 23 PRO n 3 24 THR n 3 25 VAL n 3 26 ALA n 3 27 HIS n 3 28 GLY n 3 29 VAL n 3 30 PHE n 3 31 ASN n 3 32 PRO n 3 33 GLU n 3 34 PHE n 3 35 GLY n 3 36 PRO n 3 37 ALA n 3 38 ALA n 3 39 LEU n 3 40 SER n 3 41 ASN n 3 42 LYS n 3 43 ASP n 3 44 PRO n 3 45 ARG n 3 46 LEU n 3 47 ASN n 3 48 GLU n 3 49 GLY n 3 50 VAL n 3 51 VAL n 3 52 LEU n 3 53 ASP n 3 54 GLU n 3 55 VAL n 3 56 ILE n 3 57 PHE n 3 58 SER n 3 59 LYS n 3 60 HIS n 3 61 LYS n 3 62 GLY n 3 63 ASP n 3 64 THR n 3 65 LYS n 3 66 MET n 3 67 SER n 3 68 ALA n 3 69 GLU n 3 70 ASP n 3 71 LYS n 3 72 ALA n 3 73 LEU n 3 74 PHE n 3 75 ARG n 3 76 ARG n 3 77 CYS n 3 78 ALA n 3 79 ALA n 3 80 ASP n 3 81 TYR n 3 82 ALA n 3 83 SER n 3 84 ARG n 3 85 LEU n 3 86 HIS n 3 87 SER n 3 88 VAL n 3 89 LEU n 3 90 GLY n 3 91 THR n 3 92 ALA n 3 93 ASN n 3 94 ALA n 3 95 PRO n 3 96 LEU n 3 97 SER n 3 98 ILE n 3 99 TYR n 3 100 GLU n 3 101 ALA n 3 102 ILE n 3 103 LYS n 3 104 GLY n 3 105 VAL n 3 106 ASP n 3 107 GLY n 3 108 LEU n 3 109 ASP n 3 110 ALA n 3 111 MET n 3 112 GLU n 3 113 PRO n 3 114 ASP n 3 115 THR n 3 116 ALA n 3 117 PRO n 3 118 GLY n 3 119 LEU n 3 120 PRO n 3 121 TRP n 3 122 ALA n 3 123 LEU n 3 124 GLN n 3 125 GLY n 3 126 LYS n 3 127 ARG n 3 128 ARG n 3 129 GLY n 3 130 ALA n 3 131 LEU n 3 132 ILE n 3 133 ASP n 3 134 PHE n 3 135 GLU n 3 136 ASN n 3 137 GLY n 3 138 THR n 3 139 VAL n 3 140 GLY n 3 141 PRO n 3 142 GLU n 3 143 VAL n 3 144 GLU n 3 145 ALA n 3 146 ALA n 3 147 LEU n 3 148 LYS n 3 149 LEU n 3 150 MET n 3 151 GLU n 3 152 LYS n 3 153 ARG n 3 154 GLU n 3 155 TYR n 3 156 LYS n 3 157 PHE n 3 158 ALA n 3 159 CYS n 3 160 GLN n 3 161 THR n 3 162 PHE n 3 163 LEU n 3 164 LYS n 3 165 ASP n 3 166 GLU n 3 167 ILE n 3 168 ARG n 3 169 PRO n 3 170 MET n 3 171 GLU n 3 172 LYS n 3 173 VAL n 3 174 ARG n 3 175 ALA n 3 176 GLY n 3 177 LYS n 3 178 THR n 3 179 ARG n 3 180 ILE n 3 181 VAL n 3 182 ASP n 3 183 VAL n 3 184 LEU n 3 185 PRO n 3 186 VAL n 3 187 GLU n 3 188 HIS n 3 189 ILE n 3 190 LEU n 3 191 TYR n 3 192 THR n 3 193 ARG n 3 194 MET n 3 195 MET n 3 196 ILE n 3 197 GLY n 3 198 ARG n 3 199 PHE n 3 200 CYS n 3 201 ALA n 3 202 GLN n 3 203 MET n 3 204 HIS n 3 205 SER n 3 206 ASN n 3 207 ASN n 3 208 GLY n 3 209 PRO n 3 210 GLN n 3 211 ILE n 3 212 GLY n 3 213 SER n 3 214 ALA n 3 215 VAL n 3 216 GLY n 3 217 CYS n 3 218 ASN n 3 219 PRO n 3 220 ASP n 3 221 VAL n 3 222 ASP n 3 223 TRP n 3 224 GLN n 3 225 ARG n 3 226 PHE n 3 227 GLY n 3 228 THR n 3 229 HIS n 3 230 PHE n 3 231 ALA n 3 232 GLN n 3 233 TYR n 3 234 ARG n 3 235 ASN n 3 236 VAL n 3 237 TRP n 3 238 ASP n 3 239 VAL n 3 240 ASP n 3 241 TYR n 3 242 SER n 3 243 ALA n 3 244 PHE n 3 245 ASP n 3 246 ALA n 3 247 ASN n 3 248 HIS n 3 249 CYS n 3 250 SER n 3 251 ASP n 3 252 ALA n 3 253 MET n 3 254 ASN n 3 255 ILE n 3 256 MET n 3 257 PHE n 3 258 GLU n 3 259 GLU n 3 260 VAL n 3 261 PHE n 3 262 ARG n 3 263 THR n 3 264 GLU n 3 265 PHE n 3 266 GLY n 3 267 PHE n 3 268 HIS n 3 269 PRO n 3 270 ASN n 3 271 ALA n 3 272 GLU n 3 273 TRP n 3 274 ILE n 3 275 LEU n 3 276 LYS n 3 277 THR n 3 278 LEU n 3 279 VAL n 3 280 ASN n 3 281 THR n 3 282 GLU n 3 283 HIS n 3 284 ALA n 3 285 TYR n 3 286 GLU n 3 287 ASN n 3 288 LYS n 3 289 ARG n 3 290 ILE n 3 291 THR n 3 292 VAL n 3 293 GLU n 3 294 GLY n 3 295 GLY n 3 296 MET n 3 297 PRO n 3 298 SER n 3 299 GLY n 3 300 CYS n 3 301 SER n 3 302 ALA n 3 303 THR n 3 304 SER n 3 305 ILE n 3 306 ILE n 3 307 ASN n 3 308 THR n 3 309 ILE n 3 310 LEU n 3 311 ASN n 3 312 ASN n 3 313 ILE n 3 314 TYR n 3 315 VAL n 3 316 LEU n 3 317 TYR n 3 318 ALA n 3 319 LEU n 3 320 ARG n 3 321 ARG n 3 322 HIS n 3 323 TYR n 3 324 GLU n 3 325 GLY n 3 326 VAL n 3 327 GLU n 3 328 LEU n 3 329 ASP n 3 330 THR n 3 331 TYR n 3 332 THR n 3 333 MET n 3 334 ILE n 3 335 SER n 3 336 TYR n 3 337 GLY n 3 338 ASP n 3 339 ASP n 3 340 ILE n 3 341 VAL n 3 342 VAL n 3 343 ALA n 3 344 SER n 3 345 ASP n 3 346 TYR n 3 347 ASP n 3 348 LEU n 3 349 ASP n 3 350 PHE n 3 351 GLU n 3 352 ALA n 3 353 LEU n 3 354 LYS n 3 355 PRO n 3 356 HIS n 3 357 PHE n 3 358 LYS n 3 359 SER n 3 360 LEU n 3 361 GLY n 3 362 GLN n 3 363 THR n 3 364 ILE n 3 365 THR n 3 366 PRO n 3 367 ALA n 3 368 ASP n 3 369 LYS n 3 370 SER n 3 371 ASP n 3 372 LYS n 3 373 GLY n 3 374 PHE n 3 375 VAL n 3 376 LEU n 3 377 GLY n 3 378 HIS n 3 379 SER n 3 380 ILE n 3 381 THR n 3 382 ASP n 3 383 VAL n 3 384 THR n 3 385 PHE n 3 386 LEU n 3 387 LYS n 3 388 ARG n 3 389 HIS n 3 390 PHE n 3 391 HIS n 3 392 MET n 3 393 ASP n 3 394 TYR n 3 395 GLY n 3 396 THR n 3 397 GLY n 3 398 PHE n 3 399 TYR n 3 400 LYS n 3 401 PRO n 3 402 VAL n 3 403 MET n 3 404 ALA n 3 405 SER n 3 406 LYS n 3 407 THR n 3 408 LEU n 3 409 GLU n 3 410 ALA n 3 411 ILE n 3 412 LEU n 3 413 SER n 3 414 PHE n 3 415 ALA n 3 416 ARG n 3 417 ARG n 3 418 GLY n 3 419 THR n 3 420 ILE n 3 421 GLN n 3 422 GLU n 3 423 LYS n 3 424 LEU n 3 425 ILE n 3 426 SER n 3 427 VAL n 3 428 ALA n 3 429 GLY n 3 430 LEU n 3 431 ALA n 3 432 VAL n 3 433 HIS n 3 434 SER n 3 435 GLY n 3 436 PRO n 3 437 ASP n 3 438 GLU n 3 439 TYR n 3 440 ARG n 3 441 ARG n 3 442 LEU n 3 443 PHE n 3 444 GLU n 3 445 PRO n 3 446 PHE n 3 447 GLN n 3 448 GLY n 3 449 LEU n 3 450 PHE n 3 451 GLU n 3 452 ILE n 3 453 PRO n 3 454 SER n 3 455 TYR n 3 456 ARG n 3 457 SER n 3 458 LEU n 3 459 TYR n 3 460 LEU n 3 461 ARG n 3 462 TRP n 3 463 VAL n 3 464 ASN n 3 465 ALA n 3 466 VAL n 3 467 CYS n 3 468 GLY n 3 469 ASP n 3 470 ALA n 3 471 ALA n 3 472 ALA n 3 473 LEU n 3 474 GLU n 3 475 HIS n 3 476 HIS n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Aphthovirus _entity_src_gen.pdbx_gene_src_gene 3D _entity_src_gen.gene_src_species 'Foot-and-mouth disease virus' _entity_src_gen.gene_src_strain c-s8c1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Foot-and-mouth disease virus C-S8c1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 244367 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q0QEE1_9PICO Q0QEE1 3 ;GLIVDTRDVEERVHVMRKTKLAPTVAHGVFNPEFGPAALSNKDPRLNEGVVLDEVIFSKHKGDTKMSAEDKALFRRCAAD YASRLHSVLGTANAPLSIYEAIKGVDGLDAMEPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQ TFLKDEIRPMEKVRAGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPDVDWQRFGTHFAQYRNVWDVD YSAFDANHCSDAMNIMFEEVFRTEFGFHPNAEWILKTLVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALR RHYEGVELDTYTMISYGDDIVVASDYDLDFEALKPHFKSLGQTITPADKSDKGFVLGHSITDVTFLKRHFHMDYGTGFYK PVMASKTLEAILSFARRGTIQEKLISVAGLAVHSGPDEYRRLFEPFQGLFEIPSYRSLYLRWVNAVCGDA ; 1719 ? 2 PDB 2E9Z 2E9Z 1 ? ? ? 3 PDB 2E9Z 2E9Z 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2E9Z A 1 ? 470 ? Q0QEE1 1719 ? 2188 ? 1 470 2 2 2E9Z B 1 ? 9 ? 2E9Z 902 ? 910 ? 902 910 3 3 2E9Z C 1 ? 7 ? 2E9Z 915 ? 921 ? 915 921 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2E9Z ALA A 471 ? UNP Q0QEE1 ? ? 'cloning artifact' 471 1 1 2E9Z ALA A 472 ? UNP Q0QEE1 ? ? 'cloning artifact' 472 2 1 2E9Z LEU A 473 ? UNP Q0QEE1 ? ? 'cloning artifact' 473 3 1 2E9Z GLU A 474 ? UNP Q0QEE1 ? ? 'cloning artifact' 474 4 1 2E9Z HIS A 475 ? UNP Q0QEE1 ? ? 'cloning artifact' 475 5 1 2E9Z HIS A 476 ? UNP Q0QEE1 ? ? 'cloning artifact' 476 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PPV non-polymer . PYROPHOSPHATE ? 'H4 O7 P2' 177.975 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 UTP non-polymer . ;URIDINE 5'-TRIPHOSPHATE ; ? 'C9 H15 N2 O15 P3' 484.141 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2E9Z _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.17 _exptl_crystal.density_percent_sol 43.32 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details '30% PEG 4000, 0.2M magnesium acetate, 0.1M sodium cacodylate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 4000' ? ? ? 1 2 1 'magnesium acetate' ? ? ? 1 3 1 'sodium cacodilate' ? ? ? 1 4 1 HOH ? ? ? 1 5 2 'PEG 4000' ? ? ? 1 6 2 'magnesium acetate' ? ? ? 1 7 2 'sodium cacodilate' ? ? ? 1 8 2 HOH ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 77 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2004-11-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.933 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.933 # _reflns.entry_id 2E9Z _reflns.observed_criterion_sigma_F 1 _reflns.observed_criterion_sigma_I 1 _reflns.d_resolution_high 3.0 _reflns.d_resolution_low 30.0 _reflns.number_all 10973 _reflns.number_obs 10043 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs 0.8 _reflns.pdbx_Rsym_value 0.56 _reflns.pdbx_netI_over_sigmaI 10.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 2E9Z _refine.ls_number_reflns_obs 10043 _refine.ls_number_reflns_all 10973 _refine.pdbx_ls_sigma_I 2 _refine.pdbx_ls_sigma_F 2 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 3.00 _refine.ls_percent_reflns_obs 99.99 _refine.ls_R_factor_obs 0.23913 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22724 _refine.ls_R_factor_R_free 0.28993 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 504 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.914 _refine.correlation_coeff_Fo_to_Fc_free 0.872 _refine.B_iso_mean 62.452 _refine.aniso_B[1][1] 1.37 _refine.aniso_B[2][2] 1.37 _refine.aniso_B[3][3] -2.06 _refine.aniso_B[1][2] 0.69 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB entry 1WNE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.569 _refine.overall_SU_ML 0.440 _refine.overall_SU_B 23.716 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3731 _refine_hist.pdbx_number_atoms_nucleic_acid 336 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 20 _refine_hist.number_atoms_total 4127 _refine_hist.d_res_high 3.00 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.022 ? 4232 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.406 2.063 ? 5816 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.387 5.000 ? 475 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 40.337 23.258 ? 178 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.927 15.000 ? 629 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.041 15.000 ? 28 'X-RAY DIFFRACTION' ? r_chiral_restr 0.078 0.200 ? 647 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 3109 'X-RAY DIFFRACTION' ? r_nbd_refined 0.257 0.200 ? 2495 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.318 0.200 ? 2945 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.207 0.200 ? 210 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.303 0.200 ? 77 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.182 0.200 ? 4 'X-RAY DIFFRACTION' ? r_mcbond_it 0.655 1.500 ? 2402 'X-RAY DIFFRACTION' ? r_mcangle_it 1.200 2.000 ? 3802 'X-RAY DIFFRACTION' ? r_scbond_it 1.232 3.000 ? 2154 'X-RAY DIFFRACTION' ? r_scangle_it 2.109 4.500 ? 2014 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 3.000 _refine_ls_shell.d_res_low 3.077 _refine_ls_shell.number_reflns_R_work 719 _refine_ls_shell.R_factor_R_work 0.333 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.453 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 45 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2E9Z _struct.title 'Foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA, ATP and UTP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2E9Z _struct_keywords.pdbx_keywords TRANSFERASE/RNA _struct_keywords.text '3D polymerase, Foot-and- mouth disease virus, RNA-dependent RNA polymerase, polymerase, TRANSFERASE-RNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 7 ? I N N 7 ? J N N 7 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA C 26 ? ASN C 31 ? ALA A 26 ASN A 31 1 ? 6 HELX_P HELX_P2 2 VAL C 51 ? ILE C 56 ? VAL A 51 ILE A 56 1 ? 6 HELX_P HELX_P3 3 SER C 67 ? GLY C 90 ? SER A 67 GLY A 90 1 ? 24 HELX_P HELX_P4 4 TYR C 99 ? GLY C 104 ? TYR A 99 GLY A 104 1 ? 6 HELX_P HELX_P5 5 ARG C 127 ? ALA C 130 ? ARG A 127 ALA A 130 5 ? 4 HELX_P HELX_P6 6 GLY C 140 ? GLU C 151 ? GLY A 140 GLU A 151 1 ? 12 HELX_P HELX_P7 7 MET C 170 ? ALA C 175 ? MET A 170 ALA A 175 1 ? 6 HELX_P HELX_P8 8 PRO C 185 ? SER C 205 ? PRO A 185 SER A 205 1 ? 21 HELX_P HELX_P9 9 ASN C 218 ? ALA C 231 ? ASN A 218 ALA A 231 1 ? 14 HELX_P HELX_P10 10 ALA C 243 ? ASN C 247 ? ALA A 243 ASN A 247 5 ? 5 HELX_P HELX_P11 11 CYS C 249 ? PHE C 261 ? CYS A 249 PHE A 261 1 ? 13 HELX_P HELX_P12 12 ARG C 262 ? GLY C 266 ? ARG A 262 GLY A 266 5 ? 5 HELX_P HELX_P13 13 PRO C 269 ? THR C 277 ? PRO A 269 THR A 277 1 ? 9 HELX_P HELX_P14 14 ALA C 302 ? ARG C 321 ? ALA A 302 ARG A 321 1 ? 20 HELX_P HELX_P15 15 ASP C 349 ? ALA C 352 ? ASP A 349 ALA A 352 5 ? 4 HELX_P HELX_P16 16 LEU C 353 ? SER C 359 ? LEU A 353 SER A 359 1 ? 7 HELX_P HELX_P17 17 ASP C 368 ? LYS C 372 ? ASP A 368 LYS A 372 5 ? 5 HELX_P HELX_P18 18 ALA C 404 ? LEU C 412 ? ALA A 404 LEU A 412 1 ? 9 HELX_P HELX_P19 19 THR C 419 ? VAL C 432 ? THR A 419 VAL A 432 1 ? 14 HELX_P HELX_P20 20 SER C 434 ? PHE C 443 ? SER A 434 PHE A 443 1 ? 10 HELX_P HELX_P21 21 GLU C 444 ? GLN C 447 ? GLU A 444 GLN A 447 5 ? 4 HELX_P HELX_P22 22 SER C 454 ? CYS C 467 ? SER A 454 CYS A 467 1 ? 14 HELX_P HELX_P23 23 CYS C 467 ? LEU C 473 ? CYS A 467 LEU A 473 1 ? 7 HELX_P HELX_P24 24 GLU C 474 ? HIS C 476 ? GLU A 474 HIS A 476 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C ASP 238 OD1 ? ? ? 1_555 D MG . MG ? ? A ASP 238 A MG 1030 1_555 ? ? ? ? ? ? ? 2.825 ? ? metalc2 metalc ? ? C TYR 241 O ? ? ? 1_555 E MG . MG ? ? A TYR 241 A MG 1031 1_555 ? ? ? ? ? ? ? 3.116 ? ? metalc3 metalc ? ? C ASP 339 OD2 ? ? ? 1_555 D MG . MG ? ? A ASP 339 A MG 1030 1_555 ? ? ? ? ? ? ? 2.943 ? ? metalc4 metalc ? ? C THR 384 O ? ? ? 1_555 D MG . MG ? ? A THR 384 A MG 1030 1_555 ? ? ? ? ? ? ? 3.114 ? ? metalc5 metalc ? ? F UTP . O3A ? ? ? 1_555 E MG . MG ? ? A UTP 993 A MG 1031 1_555 ? ? ? ? ? ? ? 2.867 ? ? hydrog1 hydrog ? ? A U 3 N3 ? ? ? 1_555 B A 7 N1 ? ? B U 904 C A 921 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog2 hydrog ? ? A G 4 N1 ? ? ? 1_555 B C 6 N3 ? ? B G 905 C C 920 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog3 hydrog ? ? A G 5 N1 ? ? ? 1_555 B C 5 N3 ? ? B G 906 C C 919 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 5 N2 ? ? ? 1_555 B C 5 O2 ? ? B G 906 C C 919 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 5 O6 ? ? ? 1_555 B C 5 N4 ? ? B G 906 C C 919 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 6 N1 ? ? ? 1_555 B C 4 N3 ? ? B G 907 C C 918 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog7 hydrog ? ? A C 7 N3 ? ? ? 1_555 B G 3 N1 ? ? B C 908 C G 917 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 7 N4 ? ? ? 1_555 B G 3 O6 ? ? B C 908 C G 917 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 7 O2 ? ? ? 1_555 B G 3 N2 ? ? B C 908 C G 917 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 8 O2 ? ? ? 1_555 B G 2 N1 ? ? B C 909 C G 916 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog11 hydrog ? ? A C 9 O2 ? ? ? 1_555 B G 1 N1 ? ? B C 910 C G 915 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LEU _struct_mon_prot_cis.label_seq_id 119 _struct_mon_prot_cis.label_asym_id C _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LEU _struct_mon_prot_cis.auth_seq_id 119 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 120 _struct_mon_prot_cis.pdbx_label_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 120 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.25 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 2 ? D ? 4 ? E ? 3 ? F ? 2 ? G ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel F 1 2 ? anti-parallel G 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA C 22 ? PRO C 23 ? ALA A 22 PRO A 23 A 2 PHE C 414 ? ALA C 415 ? PHE A 414 ALA A 415 B 1 PHE C 34 ? PRO C 36 ? PHE A 34 PRO A 36 B 2 ILE C 167 ? PRO C 169 ? ILE A 167 PRO A 169 C 1 ILE C 132 ? ASP C 133 ? ILE A 132 ASP A 133 C 2 THR C 138 ? VAL C 139 ? THR A 138 VAL A 139 D 1 ILE C 180 ? VAL C 183 ? ILE A 180 VAL A 183 D 2 CYS C 159 ? LEU C 163 ? CYS A 159 LEU A 163 D 3 ASN C 280 ? ALA C 284 ? ASN A 280 ALA A 284 D 4 THR C 291 ? GLU C 293 ? THR A 291 GLU A 293 E 1 ASN C 235 ? TRP C 237 ? ASN A 235 TRP A 237 E 2 ASP C 339 ? SER C 344 ? ASP A 339 SER A 344 E 3 THR C 332 ? TYR C 336 ? THR A 332 TYR A 336 F 1 VAL C 239 ? ASP C 240 ? VAL A 239 ASP A 240 F 2 THR C 365 ? PRO C 366 ? THR A 365 PRO A 366 G 1 HIS C 389 ? MET C 392 ? HIS A 389 MET A 392 G 2 TYR C 399 ? VAL C 402 ? TYR A 399 VAL A 402 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ALA C 22 ? N ALA A 22 O ALA C 415 ? O ALA A 415 B 1 2 N GLY C 35 ? N GLY A 35 O ARG C 168 ? O ARG A 168 C 1 2 N ASP C 133 ? N ASP A 133 O THR C 138 ? O THR A 138 D 1 2 O VAL C 183 ? O VAL A 183 N GLN C 160 ? N GLN A 160 D 2 3 N CYS C 159 ? N CYS A 159 O GLU C 282 ? O GLU A 282 D 3 4 N THR C 281 ? N THR A 281 O VAL C 292 ? O VAL A 292 E 1 2 N TRP C 237 ? N TRP A 237 O VAL C 342 ? O VAL A 342 E 2 3 O ALA C 343 ? O ALA A 343 N THR C 332 ? N THR A 332 F 1 2 N ASP C 240 ? N ASP A 240 O THR C 365 ? O THR A 365 G 1 2 N HIS C 391 ? N HIS A 391 O LYS C 400 ? O LYS A 400 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 1030 ? 3 'BINDING SITE FOR RESIDUE MG A 1030' AC2 Software A MG 1031 ? 2 'BINDING SITE FOR RESIDUE MG A 1031' AC3 Software A UTP 993 ? 13 'BINDING SITE FOR RESIDUE UTP A 993' AC4 Software A PPV 665 ? 9 'BINDING SITE FOR RESIDUE PPV A 665' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 ASP C 238 ? ASP A 238 . ? 1_555 ? 2 AC1 3 ASP C 339 ? ASP A 339 . ? 1_555 ? 3 AC1 3 THR C 384 ? THR A 384 . ? 1_555 ? 4 AC2 2 TYR C 241 ? TYR A 241 . ? 1_555 ? 5 AC2 2 UTP F . ? UTP A 993 . ? 1_555 ? 6 AC3 13 LYS C 164 ? LYS A 164 . ? 1_555 ? 7 AC3 13 ARG C 168 ? ARG A 168 . ? 1_555 ? 8 AC3 13 ARG C 179 ? ARG A 179 . ? 1_555 ? 9 AC3 13 ILE C 180 ? ILE A 180 . ? 1_555 ? 10 AC3 13 VAL C 181 ? VAL A 181 . ? 1_555 ? 11 AC3 13 SER C 242 ? SER A 242 . ? 1_555 ? 12 AC3 13 ASP C 245 ? ASP A 245 . ? 1_555 ? 13 AC3 13 SER C 298 ? SER A 298 . ? 1_555 ? 14 AC3 13 ASP C 338 ? ASP A 338 . ? 1_555 ? 15 AC3 13 PPV G . ? PPV A 665 . ? 1_555 ? 16 AC3 13 MG E . ? MG A 1031 . ? 1_555 ? 17 AC3 13 A A 2 ? A B 903 . ? 1_555 ? 18 AC3 13 A B 7 ? A C 921 . ? 1_555 ? 19 AC4 9 GLU C 166 ? GLU A 166 . ? 1_555 ? 20 AC4 9 ARG C 179 ? ARG A 179 . ? 1_555 ? 21 AC4 9 LYS C 387 ? LYS A 387 . ? 1_555 ? 22 AC4 9 UTP F . ? UTP A 993 . ? 1_555 ? 23 AC4 9 HOH J . ? HOH A 1036 . ? 1_555 ? 24 AC4 9 HOH J . ? HOH A 1046 . ? 1_555 ? 25 AC4 9 HOH I . ? HOH C 527 . ? 1_555 ? 26 AC4 9 C B 6 ? C C 920 . ? 1_555 ? 27 AC4 9 A B 7 ? A C 921 . ? 1_555 ? # _database_PDB_matrix.entry_id 2E9Z _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2E9Z _atom_sites.fract_transf_matrix[1][1] 0.010626 _atom_sites.fract_transf_matrix[1][2] 0.006135 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012270 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010064 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 902 902 C C B . n A 1 2 A 2 903 903 A A B . n A 1 3 U 3 904 904 U U B . n A 1 4 G 4 905 905 G G B . n A 1 5 G 5 906 906 G G B . n A 1 6 G 6 907 907 G G B . n A 1 7 C 7 908 908 C C B . n A 1 8 C 8 909 909 C C B . n A 1 9 C 9 910 910 C C B . n B 2 1 G 1 915 915 G G C . n B 2 2 G 2 916 916 G G C . n B 2 3 G 3 917 917 G G C . n B 2 4 C 4 918 918 C C C . n B 2 5 C 5 919 919 C C C . n B 2 6 C 6 920 920 C C C . n B 2 7 A 7 921 921 A A C . n C 3 1 GLY 1 1 1 GLY GLY A . n C 3 2 LEU 2 2 2 LEU LEU A . n C 3 3 ILE 3 3 3 ILE ILE A . n C 3 4 VAL 4 4 4 VAL VAL A . n C 3 5 ASP 5 5 5 ASP ASP A . n C 3 6 THR 6 6 6 THR THR A . n C 3 7 ARG 7 7 7 ARG ARG A . n C 3 8 ASP 8 8 8 ASP ASP A . n C 3 9 VAL 9 9 9 VAL VAL A . n C 3 10 GLU 10 10 10 GLU GLU A . n C 3 11 GLU 11 11 11 GLU GLU A . n C 3 12 ARG 12 12 12 ARG ARG A . n C 3 13 VAL 13 13 13 VAL VAL A . n C 3 14 HIS 14 14 14 HIS HIS A . n C 3 15 VAL 15 15 15 VAL VAL A . n C 3 16 MET 16 16 16 MET MET A . n C 3 17 ARG 17 17 17 ARG ARG A . n C 3 18 LYS 18 18 18 LYS LYS A . n C 3 19 THR 19 19 19 THR THR A . n C 3 20 LYS 20 20 20 LYS LYS A . n C 3 21 LEU 21 21 21 LEU LEU A . n C 3 22 ALA 22 22 22 ALA ALA A . n C 3 23 PRO 23 23 23 PRO PRO A . n C 3 24 THR 24 24 24 THR THR A . n C 3 25 VAL 25 25 25 VAL VAL A . n C 3 26 ALA 26 26 26 ALA ALA A . n C 3 27 HIS 27 27 27 HIS HIS A . n C 3 28 GLY 28 28 28 GLY GLY A . n C 3 29 VAL 29 29 29 VAL VAL A . n C 3 30 PHE 30 30 30 PHE PHE A . n C 3 31 ASN 31 31 31 ASN ASN A . n C 3 32 PRO 32 32 32 PRO PRO A . n C 3 33 GLU 33 33 33 GLU GLU A . n C 3 34 PHE 34 34 34 PHE PHE A . n C 3 35 GLY 35 35 35 GLY GLY A . n C 3 36 PRO 36 36 36 PRO PRO A . n C 3 37 ALA 37 37 37 ALA ALA A . n C 3 38 ALA 38 38 38 ALA ALA A . n C 3 39 LEU 39 39 39 LEU LEU A . n C 3 40 SER 40 40 40 SER SER A . n C 3 41 ASN 41 41 41 ASN ASN A . n C 3 42 LYS 42 42 42 LYS LYS A . n C 3 43 ASP 43 43 43 ASP ASP A . n C 3 44 PRO 44 44 44 PRO PRO A . n C 3 45 ARG 45 45 45 ARG ARG A . n C 3 46 LEU 46 46 46 LEU LEU A . n C 3 47 ASN 47 47 47 ASN ASN A . n C 3 48 GLU 48 48 48 GLU GLU A . n C 3 49 GLY 49 49 49 GLY GLY A . n C 3 50 VAL 50 50 50 VAL VAL A . n C 3 51 VAL 51 51 51 VAL VAL A . n C 3 52 LEU 52 52 52 LEU LEU A . n C 3 53 ASP 53 53 53 ASP ASP A . n C 3 54 GLU 54 54 54 GLU GLU A . n C 3 55 VAL 55 55 55 VAL VAL A . n C 3 56 ILE 56 56 56 ILE ILE A . n C 3 57 PHE 57 57 57 PHE PHE A . n C 3 58 SER 58 58 58 SER SER A . n C 3 59 LYS 59 59 59 LYS LYS A . n C 3 60 HIS 60 60 60 HIS HIS A . n C 3 61 LYS 61 61 61 LYS LYS A . n C 3 62 GLY 62 62 62 GLY GLY A . n C 3 63 ASP 63 63 63 ASP ASP A . n C 3 64 THR 64 64 64 THR THR A . n C 3 65 LYS 65 65 65 LYS LYS A . n C 3 66 MET 66 66 66 MET MET A . n C 3 67 SER 67 67 67 SER SER A . n C 3 68 ALA 68 68 68 ALA ALA A . n C 3 69 GLU 69 69 69 GLU GLU A . n C 3 70 ASP 70 70 70 ASP ASP A . n C 3 71 LYS 71 71 71 LYS LYS A . n C 3 72 ALA 72 72 72 ALA ALA A . n C 3 73 LEU 73 73 73 LEU LEU A . n C 3 74 PHE 74 74 74 PHE PHE A . n C 3 75 ARG 75 75 75 ARG ARG A . n C 3 76 ARG 76 76 76 ARG ARG A . n C 3 77 CYS 77 77 77 CYS CYS A . n C 3 78 ALA 78 78 78 ALA ALA A . n C 3 79 ALA 79 79 79 ALA ALA A . n C 3 80 ASP 80 80 80 ASP ASP A . n C 3 81 TYR 81 81 81 TYR TYR A . n C 3 82 ALA 82 82 82 ALA ALA A . n C 3 83 SER 83 83 83 SER SER A . n C 3 84 ARG 84 84 84 ARG ARG A . n C 3 85 LEU 85 85 85 LEU LEU A . n C 3 86 HIS 86 86 86 HIS HIS A . n C 3 87 SER 87 87 87 SER SER A . n C 3 88 VAL 88 88 88 VAL VAL A . n C 3 89 LEU 89 89 89 LEU LEU A . n C 3 90 GLY 90 90 90 GLY GLY A . n C 3 91 THR 91 91 91 THR THR A . n C 3 92 ALA 92 92 92 ALA ALA A . n C 3 93 ASN 93 93 93 ASN ASN A . n C 3 94 ALA 94 94 94 ALA ALA A . n C 3 95 PRO 95 95 95 PRO PRO A . n C 3 96 LEU 96 96 96 LEU LEU A . n C 3 97 SER 97 97 97 SER SER A . n C 3 98 ILE 98 98 98 ILE ILE A . n C 3 99 TYR 99 99 99 TYR TYR A . n C 3 100 GLU 100 100 100 GLU GLU A . n C 3 101 ALA 101 101 101 ALA ALA A . n C 3 102 ILE 102 102 102 ILE ILE A . n C 3 103 LYS 103 103 103 LYS LYS A . n C 3 104 GLY 104 104 104 GLY GLY A . n C 3 105 VAL 105 105 105 VAL VAL A . n C 3 106 ASP 106 106 106 ASP ASP A . n C 3 107 GLY 107 107 107 GLY GLY A . n C 3 108 LEU 108 108 108 LEU LEU A . n C 3 109 ASP 109 109 109 ASP ASP A . n C 3 110 ALA 110 110 110 ALA ALA A . n C 3 111 MET 111 111 111 MET MET A . n C 3 112 GLU 112 112 112 GLU GLU A . n C 3 113 PRO 113 113 113 PRO PRO A . n C 3 114 ASP 114 114 114 ASP ASP A . n C 3 115 THR 115 115 115 THR THR A . n C 3 116 ALA 116 116 116 ALA ALA A . n C 3 117 PRO 117 117 117 PRO PRO A . n C 3 118 GLY 118 118 118 GLY GLY A . n C 3 119 LEU 119 119 119 LEU LEU A . n C 3 120 PRO 120 120 120 PRO PRO A . n C 3 121 TRP 121 121 121 TRP TRP A . n C 3 122 ALA 122 122 122 ALA ALA A . n C 3 123 LEU 123 123 123 LEU LEU A . n C 3 124 GLN 124 124 124 GLN GLN A . n C 3 125 GLY 125 125 125 GLY GLY A . n C 3 126 LYS 126 126 126 LYS LYS A . n C 3 127 ARG 127 127 127 ARG ARG A . n C 3 128 ARG 128 128 128 ARG ARG A . n C 3 129 GLY 129 129 129 GLY GLY A . n C 3 130 ALA 130 130 130 ALA ALA A . n C 3 131 LEU 131 131 131 LEU LEU A . n C 3 132 ILE 132 132 132 ILE ILE A . n C 3 133 ASP 133 133 133 ASP ASP A . n C 3 134 PHE 134 134 134 PHE PHE A . n C 3 135 GLU 135 135 135 GLU GLU A . n C 3 136 ASN 136 136 136 ASN ASN A . n C 3 137 GLY 137 137 137 GLY GLY A . n C 3 138 THR 138 138 138 THR THR A . n C 3 139 VAL 139 139 139 VAL VAL A . n C 3 140 GLY 140 140 140 GLY GLY A . n C 3 141 PRO 141 141 141 PRO PRO A . n C 3 142 GLU 142 142 142 GLU GLU A . n C 3 143 VAL 143 143 143 VAL VAL A . n C 3 144 GLU 144 144 144 GLU GLU A . n C 3 145 ALA 145 145 145 ALA ALA A . n C 3 146 ALA 146 146 146 ALA ALA A . n C 3 147 LEU 147 147 147 LEU LEU A . n C 3 148 LYS 148 148 148 LYS LYS A . n C 3 149 LEU 149 149 149 LEU LEU A . n C 3 150 MET 150 150 150 MET MET A . n C 3 151 GLU 151 151 151 GLU GLU A . n C 3 152 LYS 152 152 152 LYS LYS A . n C 3 153 ARG 153 153 153 ARG ARG A . n C 3 154 GLU 154 154 154 GLU GLU A . n C 3 155 TYR 155 155 155 TYR TYR A . n C 3 156 LYS 156 156 156 LYS LYS A . n C 3 157 PHE 157 157 157 PHE PHE A . n C 3 158 ALA 158 158 158 ALA ALA A . n C 3 159 CYS 159 159 159 CYS CYS A . n C 3 160 GLN 160 160 160 GLN GLN A . n C 3 161 THR 161 161 161 THR THR A . n C 3 162 PHE 162 162 162 PHE PHE A . n C 3 163 LEU 163 163 163 LEU LEU A . n C 3 164 LYS 164 164 164 LYS LYS A . n C 3 165 ASP 165 165 165 ASP ASP A . n C 3 166 GLU 166 166 166 GLU GLU A . n C 3 167 ILE 167 167 167 ILE ILE A . n C 3 168 ARG 168 168 168 ARG ARG A . n C 3 169 PRO 169 169 169 PRO PRO A . n C 3 170 MET 170 170 170 MET MET A . n C 3 171 GLU 171 171 171 GLU GLU A . n C 3 172 LYS 172 172 172 LYS LYS A . n C 3 173 VAL 173 173 173 VAL VAL A . n C 3 174 ARG 174 174 174 ARG ARG A . n C 3 175 ALA 175 175 175 ALA ALA A . n C 3 176 GLY 176 176 176 GLY GLY A . n C 3 177 LYS 177 177 177 LYS LYS A . n C 3 178 THR 178 178 178 THR THR A . n C 3 179 ARG 179 179 179 ARG ARG A . n C 3 180 ILE 180 180 180 ILE ILE A . n C 3 181 VAL 181 181 181 VAL VAL A . n C 3 182 ASP 182 182 182 ASP ASP A . n C 3 183 VAL 183 183 183 VAL VAL A . n C 3 184 LEU 184 184 184 LEU LEU A . n C 3 185 PRO 185 185 185 PRO PRO A . n C 3 186 VAL 186 186 186 VAL VAL A . n C 3 187 GLU 187 187 187 GLU GLU A . n C 3 188 HIS 188 188 188 HIS HIS A . n C 3 189 ILE 189 189 189 ILE ILE A . n C 3 190 LEU 190 190 190 LEU LEU A . n C 3 191 TYR 191 191 191 TYR TYR A . n C 3 192 THR 192 192 192 THR THR A . n C 3 193 ARG 193 193 193 ARG ARG A . n C 3 194 MET 194 194 194 MET MET A . n C 3 195 MET 195 195 195 MET MET A . n C 3 196 ILE 196 196 196 ILE ILE A . n C 3 197 GLY 197 197 197 GLY GLY A . n C 3 198 ARG 198 198 198 ARG ARG A . n C 3 199 PHE 199 199 199 PHE PHE A . n C 3 200 CYS 200 200 200 CYS CYS A . n C 3 201 ALA 201 201 201 ALA ALA A . n C 3 202 GLN 202 202 202 GLN GLN A . n C 3 203 MET 203 203 203 MET MET A . n C 3 204 HIS 204 204 204 HIS HIS A . n C 3 205 SER 205 205 205 SER SER A . n C 3 206 ASN 206 206 206 ASN ASN A . n C 3 207 ASN 207 207 207 ASN ASN A . n C 3 208 GLY 208 208 208 GLY GLY A . n C 3 209 PRO 209 209 209 PRO PRO A . n C 3 210 GLN 210 210 210 GLN GLN A . n C 3 211 ILE 211 211 211 ILE ILE A . n C 3 212 GLY 212 212 212 GLY GLY A . n C 3 213 SER 213 213 213 SER SER A . n C 3 214 ALA 214 214 214 ALA ALA A . n C 3 215 VAL 215 215 215 VAL VAL A . n C 3 216 GLY 216 216 216 GLY GLY A . n C 3 217 CYS 217 217 217 CYS CYS A . n C 3 218 ASN 218 218 218 ASN ASN A . n C 3 219 PRO 219 219 219 PRO PRO A . n C 3 220 ASP 220 220 220 ASP ASP A . n C 3 221 VAL 221 221 221 VAL VAL A . n C 3 222 ASP 222 222 222 ASP ASP A . n C 3 223 TRP 223 223 223 TRP TRP A . n C 3 224 GLN 224 224 224 GLN GLN A . n C 3 225 ARG 225 225 225 ARG ARG A . n C 3 226 PHE 226 226 226 PHE PHE A . n C 3 227 GLY 227 227 227 GLY GLY A . n C 3 228 THR 228 228 228 THR THR A . n C 3 229 HIS 229 229 229 HIS HIS A . n C 3 230 PHE 230 230 230 PHE PHE A . n C 3 231 ALA 231 231 231 ALA ALA A . n C 3 232 GLN 232 232 232 GLN GLN A . n C 3 233 TYR 233 233 233 TYR TYR A . n C 3 234 ARG 234 234 234 ARG ARG A . n C 3 235 ASN 235 235 235 ASN ASN A . n C 3 236 VAL 236 236 236 VAL VAL A . n C 3 237 TRP 237 237 237 TRP TRP A . n C 3 238 ASP 238 238 238 ASP ASP A . n C 3 239 VAL 239 239 239 VAL VAL A . n C 3 240 ASP 240 240 240 ASP ASP A . n C 3 241 TYR 241 241 241 TYR TYR A . n C 3 242 SER 242 242 242 SER SER A . n C 3 243 ALA 243 243 243 ALA ALA A . n C 3 244 PHE 244 244 244 PHE PHE A . n C 3 245 ASP 245 245 245 ASP ASP A . n C 3 246 ALA 246 246 246 ALA ALA A . n C 3 247 ASN 247 247 247 ASN ASN A . n C 3 248 HIS 248 248 248 HIS HIS A . n C 3 249 CYS 249 249 249 CYS CYS A . n C 3 250 SER 250 250 250 SER SER A . n C 3 251 ASP 251 251 251 ASP ASP A . n C 3 252 ALA 252 252 252 ALA ALA A . n C 3 253 MET 253 253 253 MET MET A . n C 3 254 ASN 254 254 254 ASN ASN A . n C 3 255 ILE 255 255 255 ILE ILE A . n C 3 256 MET 256 256 256 MET MET A . n C 3 257 PHE 257 257 257 PHE PHE A . n C 3 258 GLU 258 258 258 GLU GLU A . n C 3 259 GLU 259 259 259 GLU GLU A . n C 3 260 VAL 260 260 260 VAL VAL A . n C 3 261 PHE 261 261 261 PHE PHE A . n C 3 262 ARG 262 262 262 ARG ARG A . n C 3 263 THR 263 263 263 THR THR A . n C 3 264 GLU 264 264 264 GLU GLU A . n C 3 265 PHE 265 265 265 PHE PHE A . n C 3 266 GLY 266 266 266 GLY GLY A . n C 3 267 PHE 267 267 267 PHE PHE A . n C 3 268 HIS 268 268 268 HIS HIS A . n C 3 269 PRO 269 269 269 PRO PRO A . n C 3 270 ASN 270 270 270 ASN ASN A . n C 3 271 ALA 271 271 271 ALA ALA A . n C 3 272 GLU 272 272 272 GLU GLU A . n C 3 273 TRP 273 273 273 TRP TRP A . n C 3 274 ILE 274 274 274 ILE ILE A . n C 3 275 LEU 275 275 275 LEU LEU A . n C 3 276 LYS 276 276 276 LYS LYS A . n C 3 277 THR 277 277 277 THR THR A . n C 3 278 LEU 278 278 278 LEU LEU A . n C 3 279 VAL 279 279 279 VAL VAL A . n C 3 280 ASN 280 280 280 ASN ASN A . n C 3 281 THR 281 281 281 THR THR A . n C 3 282 GLU 282 282 282 GLU GLU A . n C 3 283 HIS 283 283 283 HIS HIS A . n C 3 284 ALA 284 284 284 ALA ALA A . n C 3 285 TYR 285 285 285 TYR TYR A . n C 3 286 GLU 286 286 286 GLU GLU A . n C 3 287 ASN 287 287 287 ASN ASN A . n C 3 288 LYS 288 288 288 LYS LYS A . n C 3 289 ARG 289 289 289 ARG ARG A . n C 3 290 ILE 290 290 290 ILE ILE A . n C 3 291 THR 291 291 291 THR THR A . n C 3 292 VAL 292 292 292 VAL VAL A . n C 3 293 GLU 293 293 293 GLU GLU A . n C 3 294 GLY 294 294 294 GLY GLY A . n C 3 295 GLY 295 295 295 GLY GLY A . n C 3 296 MET 296 296 296 MET MET A . n C 3 297 PRO 297 297 297 PRO PRO A . n C 3 298 SER 298 298 298 SER SER A . n C 3 299 GLY 299 299 299 GLY GLY A . n C 3 300 CYS 300 300 300 CYS CYS A . n C 3 301 SER 301 301 301 SER SER A . n C 3 302 ALA 302 302 302 ALA ALA A . n C 3 303 THR 303 303 303 THR THR A . n C 3 304 SER 304 304 304 SER SER A . n C 3 305 ILE 305 305 305 ILE ILE A . n C 3 306 ILE 306 306 306 ILE ILE A . n C 3 307 ASN 307 307 307 ASN ASN A . n C 3 308 THR 308 308 308 THR THR A . n C 3 309 ILE 309 309 309 ILE ILE A . n C 3 310 LEU 310 310 310 LEU LEU A . n C 3 311 ASN 311 311 311 ASN ASN A . n C 3 312 ASN 312 312 312 ASN ASN A . n C 3 313 ILE 313 313 313 ILE ILE A . n C 3 314 TYR 314 314 314 TYR TYR A . n C 3 315 VAL 315 315 315 VAL VAL A . n C 3 316 LEU 316 316 316 LEU LEU A . n C 3 317 TYR 317 317 317 TYR TYR A . n C 3 318 ALA 318 318 318 ALA ALA A . n C 3 319 LEU 319 319 319 LEU LEU A . n C 3 320 ARG 320 320 320 ARG ARG A . n C 3 321 ARG 321 321 321 ARG ARG A . n C 3 322 HIS 322 322 322 HIS HIS A . n C 3 323 TYR 323 323 323 TYR TYR A . n C 3 324 GLU 324 324 324 GLU GLU A . n C 3 325 GLY 325 325 325 GLY GLY A . n C 3 326 VAL 326 326 326 VAL VAL A . n C 3 327 GLU 327 327 327 GLU GLU A . n C 3 328 LEU 328 328 328 LEU LEU A . n C 3 329 ASP 329 329 329 ASP ASP A . n C 3 330 THR 330 330 330 THR THR A . n C 3 331 TYR 331 331 331 TYR TYR A . n C 3 332 THR 332 332 332 THR THR A . n C 3 333 MET 333 333 333 MET MET A . n C 3 334 ILE 334 334 334 ILE ILE A . n C 3 335 SER 335 335 335 SER SER A . n C 3 336 TYR 336 336 336 TYR TYR A . n C 3 337 GLY 337 337 337 GLY GLY A . n C 3 338 ASP 338 338 338 ASP ASP A . n C 3 339 ASP 339 339 339 ASP ASP A . n C 3 340 ILE 340 340 340 ILE ILE A . n C 3 341 VAL 341 341 341 VAL VAL A . n C 3 342 VAL 342 342 342 VAL VAL A . n C 3 343 ALA 343 343 343 ALA ALA A . n C 3 344 SER 344 344 344 SER SER A . n C 3 345 ASP 345 345 345 ASP ASP A . n C 3 346 TYR 346 346 346 TYR TYR A . n C 3 347 ASP 347 347 347 ASP ASP A . n C 3 348 LEU 348 348 348 LEU LEU A . n C 3 349 ASP 349 349 349 ASP ASP A . n C 3 350 PHE 350 350 350 PHE PHE A . n C 3 351 GLU 351 351 351 GLU GLU A . n C 3 352 ALA 352 352 352 ALA ALA A . n C 3 353 LEU 353 353 353 LEU LEU A . n C 3 354 LYS 354 354 354 LYS LYS A . n C 3 355 PRO 355 355 355 PRO PRO A . n C 3 356 HIS 356 356 356 HIS HIS A . n C 3 357 PHE 357 357 357 PHE PHE A . n C 3 358 LYS 358 358 358 LYS LYS A . n C 3 359 SER 359 359 359 SER SER A . n C 3 360 LEU 360 360 360 LEU LEU A . n C 3 361 GLY 361 361 361 GLY GLY A . n C 3 362 GLN 362 362 362 GLN GLN A . n C 3 363 THR 363 363 363 THR THR A . n C 3 364 ILE 364 364 364 ILE ILE A . n C 3 365 THR 365 365 365 THR THR A . n C 3 366 PRO 366 366 366 PRO PRO A . n C 3 367 ALA 367 367 367 ALA ALA A . n C 3 368 ASP 368 368 368 ASP ASP A . n C 3 369 LYS 369 369 369 LYS LYS A . n C 3 370 SER 370 370 370 SER SER A . n C 3 371 ASP 371 371 371 ASP ASP A . n C 3 372 LYS 372 372 372 LYS LYS A . n C 3 373 GLY 373 373 373 GLY GLY A . n C 3 374 PHE 374 374 374 PHE PHE A . n C 3 375 VAL 375 375 375 VAL VAL A . n C 3 376 LEU 376 376 376 LEU LEU A . n C 3 377 GLY 377 377 377 GLY GLY A . n C 3 378 HIS 378 378 378 HIS HIS A . n C 3 379 SER 379 379 379 SER SER A . n C 3 380 ILE 380 380 380 ILE ILE A . n C 3 381 THR 381 381 381 THR THR A . n C 3 382 ASP 382 382 382 ASP ASP A . n C 3 383 VAL 383 383 383 VAL VAL A . n C 3 384 THR 384 384 384 THR THR A . n C 3 385 PHE 385 385 385 PHE PHE A . n C 3 386 LEU 386 386 386 LEU LEU A . n C 3 387 LYS 387 387 387 LYS LYS A . n C 3 388 ARG 388 388 388 ARG ARG A . n C 3 389 HIS 389 389 389 HIS HIS A . n C 3 390 PHE 390 390 390 PHE PHE A . n C 3 391 HIS 391 391 391 HIS HIS A . n C 3 392 MET 392 392 392 MET MET A . n C 3 393 ASP 393 393 393 ASP ASP A . n C 3 394 TYR 394 394 394 TYR TYR A . n C 3 395 GLY 395 395 395 GLY GLY A . n C 3 396 THR 396 396 396 THR THR A . n C 3 397 GLY 397 397 397 GLY GLY A . n C 3 398 PHE 398 398 398 PHE PHE A . n C 3 399 TYR 399 399 399 TYR TYR A . n C 3 400 LYS 400 400 400 LYS LYS A . n C 3 401 PRO 401 401 401 PRO PRO A . n C 3 402 VAL 402 402 402 VAL VAL A . n C 3 403 MET 403 403 403 MET MET A . n C 3 404 ALA 404 404 404 ALA ALA A . n C 3 405 SER 405 405 405 SER SER A . n C 3 406 LYS 406 406 406 LYS LYS A . n C 3 407 THR 407 407 407 THR THR A . n C 3 408 LEU 408 408 408 LEU LEU A . n C 3 409 GLU 409 409 409 GLU GLU A . n C 3 410 ALA 410 410 410 ALA ALA A . n C 3 411 ILE 411 411 411 ILE ILE A . n C 3 412 LEU 412 412 412 LEU LEU A . n C 3 413 SER 413 413 413 SER SER A . n C 3 414 PHE 414 414 414 PHE PHE A . n C 3 415 ALA 415 415 415 ALA ALA A . n C 3 416 ARG 416 416 416 ARG ARG A . n C 3 417 ARG 417 417 417 ARG ARG A . n C 3 418 GLY 418 418 418 GLY GLY A . n C 3 419 THR 419 419 419 THR THR A . n C 3 420 ILE 420 420 420 ILE ILE A . n C 3 421 GLN 421 421 421 GLN GLN A . n C 3 422 GLU 422 422 422 GLU GLU A . n C 3 423 LYS 423 423 423 LYS LYS A . n C 3 424 LEU 424 424 424 LEU LEU A . n C 3 425 ILE 425 425 425 ILE ILE A . n C 3 426 SER 426 426 426 SER SER A . n C 3 427 VAL 427 427 427 VAL VAL A . n C 3 428 ALA 428 428 428 ALA ALA A . n C 3 429 GLY 429 429 429 GLY GLY A . n C 3 430 LEU 430 430 430 LEU LEU A . n C 3 431 ALA 431 431 431 ALA ALA A . n C 3 432 VAL 432 432 432 VAL VAL A . n C 3 433 HIS 433 433 433 HIS HIS A . n C 3 434 SER 434 434 434 SER SER A . n C 3 435 GLY 435 435 435 GLY GLY A . n C 3 436 PRO 436 436 436 PRO PRO A . n C 3 437 ASP 437 437 437 ASP ASP A . n C 3 438 GLU 438 438 438 GLU GLU A . n C 3 439 TYR 439 439 439 TYR TYR A . n C 3 440 ARG 440 440 440 ARG ARG A . n C 3 441 ARG 441 441 441 ARG ARG A . n C 3 442 LEU 442 442 442 LEU LEU A . n C 3 443 PHE 443 443 443 PHE PHE A . n C 3 444 GLU 444 444 444 GLU GLU A . n C 3 445 PRO 445 445 445 PRO PRO A . n C 3 446 PHE 446 446 446 PHE PHE A . n C 3 447 GLN 447 447 447 GLN GLN A . n C 3 448 GLY 448 448 448 GLY GLY A . n C 3 449 LEU 449 449 449 LEU LEU A . n C 3 450 PHE 450 450 450 PHE PHE A . n C 3 451 GLU 451 451 451 GLU GLU A . n C 3 452 ILE 452 452 452 ILE ILE A . n C 3 453 PRO 453 453 453 PRO PRO A . n C 3 454 SER 454 454 454 SER SER A . n C 3 455 TYR 455 455 455 TYR TYR A . n C 3 456 ARG 456 456 456 ARG ARG A . n C 3 457 SER 457 457 457 SER SER A . n C 3 458 LEU 458 458 458 LEU LEU A . n C 3 459 TYR 459 459 459 TYR TYR A . n C 3 460 LEU 460 460 460 LEU LEU A . n C 3 461 ARG 461 461 461 ARG ARG A . n C 3 462 TRP 462 462 462 TRP TRP A . n C 3 463 VAL 463 463 463 VAL VAL A . n C 3 464 ASN 464 464 464 ASN ASN A . n C 3 465 ALA 465 465 465 ALA ALA A . n C 3 466 VAL 466 466 466 VAL VAL A . n C 3 467 CYS 467 467 467 CYS CYS A . n C 3 468 GLY 468 468 468 GLY GLY A . n C 3 469 ASP 469 469 469 ASP ASP A . n C 3 470 ALA 470 470 470 ALA ALA A . n C 3 471 ALA 471 471 471 ALA ALA A . n C 3 472 ALA 472 472 472 ALA ALA A . n C 3 473 LEU 473 473 473 LEU LEU A . n C 3 474 GLU 474 474 474 GLU GLU A . n C 3 475 HIS 475 475 475 HIS HIS A . n C 3 476 HIS 476 476 476 HIS HIS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG 1 1030 1030 MG MG A . E 4 MG 1 1031 1031 MG MG A . F 5 UTP 1 993 993 UTP UTP A . G 6 PPV 1 665 665 PPV PPV A . H 7 HOH 1 516 516 HOH HOH B . H 7 HOH 2 523 523 HOH HOH B . I 7 HOH 1 517 517 HOH HOH C . I 7 HOH 2 522 522 HOH HOH C . I 7 HOH 3 527 527 HOH HOH C . J 7 HOH 1 1032 236 HOH HOH A . J 7 HOH 2 1033 501 HOH HOH A . J 7 HOH 3 1034 502 HOH HOH A . J 7 HOH 4 1035 505 HOH HOH A . J 7 HOH 5 1036 507 HOH HOH A . J 7 HOH 6 1037 508 HOH HOH A . J 7 HOH 7 1038 510 HOH HOH A . J 7 HOH 8 1039 511 HOH HOH A . J 7 HOH 9 1040 512 HOH HOH A . J 7 HOH 10 1041 513 HOH HOH A . J 7 HOH 11 1042 520 HOH HOH A . J 7 HOH 12 1043 524 HOH HOH A . J 7 HOH 13 1044 525 HOH HOH A . J 7 HOH 14 1045 526 HOH HOH A . J 7 HOH 15 1046 528 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? C ASP 238 ? A ASP 238 ? 1_555 MG ? D MG . ? A MG 1030 ? 1_555 OD2 ? C ASP 339 ? A ASP 339 ? 1_555 170.8 ? 2 OD1 ? C ASP 238 ? A ASP 238 ? 1_555 MG ? D MG . ? A MG 1030 ? 1_555 O ? C THR 384 ? A THR 384 ? 1_555 89.5 ? 3 OD2 ? C ASP 339 ? A ASP 339 ? 1_555 MG ? D MG . ? A MG 1030 ? 1_555 O ? C THR 384 ? A THR 384 ? 1_555 83.0 ? 4 O ? C TYR 241 ? A TYR 241 ? 1_555 MG ? E MG . ? A MG 1031 ? 1_555 O3A ? F UTP . ? A UTP 993 ? 1_555 106.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-06-26 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_ref_seq_dif 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_struct_conn.pdbx_dist_value' 16 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 17 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 18 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 22 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 24 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 28 4 'Structure model' '_struct_ref_seq_dif.details' 29 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 30 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 31 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 ProDC 'data collection' . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 CNS phasing . ? 5 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 OP2 B C 910 ? ? 1_555 OE1 A GLU 327 ? ? 6_665 1.56 2 1 OP2 B C 910 ? ? 1_555 CD A GLU 327 ? ? 6_665 1.69 3 1 OG A SER 83 ? ? 1_555 CA A PRO 453 ? ? 6_655 1.72 4 1 OG A SER 87 ? ? 1_555 CA A GLU 451 ? ? 6_655 1.75 5 1 O A GLY 377 ? ? 1_555 NH1 A ARG 417 ? ? 5_665 1.76 6 1 CD A GLU 100 ? ? 1_555 CD A GLU 100 ? ? 4_556 1.77 7 1 OE1 A GLU 100 ? ? 1_555 OE1 A GLU 100 ? ? 4_556 2.00 8 1 "C5'" B C 910 ? ? 1_555 CG A GLU 327 ? ? 6_665 2.02 9 1 NH2 A ARG 76 ? ? 1_555 ND2 A ASN 464 ? ? 6_655 2.06 10 1 CG A GLU 100 ? ? 1_555 OE2 A GLU 100 ? ? 4_556 2.10 11 1 CD A GLU 100 ? ? 1_555 OE2 A GLU 100 ? ? 4_556 2.13 12 1 CD A ARG 84 ? ? 1_555 OE1 A GLU 451 ? ? 6_655 2.17 13 1 CD A GLU 100 ? ? 1_555 OE1 A GLU 100 ? ? 4_556 2.17 14 1 CZ A ARG 262 ? ? 1_555 CD A ARG 456 ? ? 6_655 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 4 ? ? -140.00 -45.28 2 1 VAL A 9 ? ? -137.51 -126.90 3 1 GLU A 10 ? ? -117.67 -79.13 4 1 MET A 16 ? ? -76.83 35.39 5 1 HIS A 27 ? ? -40.52 -71.91 6 1 GLU A 33 ? ? -76.24 33.56 7 1 LYS A 42 ? ? -114.05 73.43 8 1 LEU A 46 ? ? -45.79 151.19 9 1 GLU A 48 ? ? -69.05 86.60 10 1 ASP A 53 ? ? -57.85 -5.25 11 1 GLU A 54 ? ? -95.99 -69.45 12 1 ILE A 102 ? ? -96.63 -72.51 13 1 ASP A 106 ? ? -63.36 97.77 14 1 LEU A 131 ? ? -143.37 -42.38 15 1 PHE A 134 ? ? -79.50 25.54 16 1 GLU A 154 ? ? -147.75 25.67 17 1 GLN A 210 ? ? -53.41 -71.00 18 1 HIS A 229 ? ? -59.47 -72.99 19 1 ASP A 238 ? ? -109.21 79.21 20 1 PHE A 261 ? ? -106.77 41.71 21 1 ASN A 270 ? ? -67.60 18.67 22 1 THR A 277 ? ? -66.84 15.17 23 1 GLU A 286 ? ? 59.75 -108.97 24 1 ASP A 368 ? ? -109.56 66.55 25 1 LYS A 372 ? ? 62.25 -0.09 26 1 LEU A 386 ? ? 70.98 49.14 27 1 LYS A 387 ? ? 57.48 19.74 28 1 ALA A 415 ? ? 179.78 160.75 29 1 CYS A 467 ? ? -170.82 100.11 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 5 ? CG ? C ASP 5 CG 2 1 Y 1 A ASP 5 ? OD1 ? C ASP 5 OD1 3 1 Y 1 A ASP 5 ? OD2 ? C ASP 5 OD2 4 1 Y 1 A ASP 114 ? CG ? C ASP 114 CG 5 1 Y 1 A ASP 114 ? OD1 ? C ASP 114 OD1 6 1 Y 1 A ASP 114 ? OD2 ? C ASP 114 OD2 7 1 Y 1 A PHE 134 ? CG ? C PHE 134 CG 8 1 Y 1 A PHE 134 ? CD1 ? C PHE 134 CD1 9 1 Y 1 A PHE 134 ? CD2 ? C PHE 134 CD2 10 1 Y 1 A PHE 134 ? CE1 ? C PHE 134 CE1 11 1 Y 1 A PHE 134 ? CE2 ? C PHE 134 CE2 12 1 Y 1 A PHE 134 ? CZ ? C PHE 134 CZ 13 1 Y 1 A GLU 282 ? CG ? C GLU 282 CG 14 1 Y 1 A GLU 282 ? CD ? C GLU 282 CD 15 1 Y 1 A GLU 282 ? OE1 ? C GLU 282 OE1 16 1 Y 1 A GLU 282 ? OE2 ? C GLU 282 OE2 17 1 Y 1 A LYS 372 ? CG ? C LYS 372 CG 18 1 Y 1 A LYS 372 ? CD ? C LYS 372 CD 19 1 Y 1 A LYS 372 ? CE ? C LYS 372 CE 20 1 Y 1 A LYS 372 ? NZ ? C LYS 372 NZ 21 1 Y 1 A TYR 394 ? CG ? C TYR 394 CG 22 1 Y 1 A TYR 394 ? CD1 ? C TYR 394 CD1 23 1 Y 1 A TYR 394 ? CD2 ? C TYR 394 CD2 24 1 Y 1 A TYR 394 ? CE1 ? C TYR 394 CE1 25 1 Y 1 A TYR 394 ? CE2 ? C TYR 394 CE2 26 1 Y 1 A TYR 394 ? CZ ? C TYR 394 CZ 27 1 Y 1 A TYR 394 ? OH ? C TYR 394 OH 28 1 Y 1 A GLU 474 ? CG ? C GLU 474 CG 29 1 Y 1 A GLU 474 ? CD ? C GLU 474 CD 30 1 Y 1 A GLU 474 ? OE1 ? C GLU 474 OE1 31 1 Y 1 A GLU 474 ? OE2 ? C GLU 474 OE2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 HOH O O N N 268 HOH H1 H N N 269 HOH H2 H N N 270 ILE N N N N 271 ILE CA C N S 272 ILE C C N N 273 ILE O O N N 274 ILE CB C N S 275 ILE CG1 C N N 276 ILE CG2 C N N 277 ILE CD1 C N N 278 ILE OXT O N N 279 ILE H H N N 280 ILE H2 H N N 281 ILE HA H N N 282 ILE HB H N N 283 ILE HG12 H N N 284 ILE HG13 H N N 285 ILE HG21 H N N 286 ILE HG22 H N N 287 ILE HG23 H N N 288 ILE HD11 H N N 289 ILE HD12 H N N 290 ILE HD13 H N N 291 ILE HXT H N N 292 LEU N N N N 293 LEU CA C N S 294 LEU C C N N 295 LEU O O N N 296 LEU CB C N N 297 LEU CG C N N 298 LEU CD1 C N N 299 LEU CD2 C N N 300 LEU OXT O N N 301 LEU H H N N 302 LEU H2 H N N 303 LEU HA H N N 304 LEU HB2 H N N 305 LEU HB3 H N N 306 LEU HG H N N 307 LEU HD11 H N N 308 LEU HD12 H N N 309 LEU HD13 H N N 310 LEU HD21 H N N 311 LEU HD22 H N N 312 LEU HD23 H N N 313 LEU HXT H N N 314 LYS N N N N 315 LYS CA C N S 316 LYS C C N N 317 LYS O O N N 318 LYS CB C N N 319 LYS CG C N N 320 LYS CD C N N 321 LYS CE C N N 322 LYS NZ N N N 323 LYS OXT O N N 324 LYS H H N N 325 LYS H2 H N N 326 LYS HA H N N 327 LYS HB2 H N N 328 LYS HB3 H N N 329 LYS HG2 H N N 330 LYS HG3 H N N 331 LYS HD2 H N N 332 LYS HD3 H N N 333 LYS HE2 H N N 334 LYS HE3 H N N 335 LYS HZ1 H N N 336 LYS HZ2 H N N 337 LYS HZ3 H N N 338 LYS HXT H N N 339 MET N N N N 340 MET CA C N S 341 MET C C N N 342 MET O O N N 343 MET CB C N N 344 MET CG C N N 345 MET SD S N N 346 MET CE C N N 347 MET OXT O N N 348 MET H H N N 349 MET H2 H N N 350 MET HA H N N 351 MET HB2 H N N 352 MET HB3 H N N 353 MET HG2 H N N 354 MET HG3 H N N 355 MET HE1 H N N 356 MET HE2 H N N 357 MET HE3 H N N 358 MET HXT H N N 359 MG MG MG N N 360 PHE N N N N 361 PHE CA C N S 362 PHE C C N N 363 PHE O O N N 364 PHE CB C N N 365 PHE CG C Y N 366 PHE CD1 C Y N 367 PHE CD2 C Y N 368 PHE CE1 C Y N 369 PHE CE2 C Y N 370 PHE CZ C Y N 371 PHE OXT O N N 372 PHE H H N N 373 PHE H2 H N N 374 PHE HA H N N 375 PHE HB2 H N N 376 PHE HB3 H N N 377 PHE HD1 H N N 378 PHE HD2 H N N 379 PHE HE1 H N N 380 PHE HE2 H N N 381 PHE HZ H N N 382 PHE HXT H N N 383 PPV O11 O N N 384 PPV P1 P N N 385 PPV O21 O N N 386 PPV O31 O N N 387 PPV OPP O N N 388 PPV P2 P N N 389 PPV O12 O N N 390 PPV O22 O N N 391 PPV O32 O N N 392 PPV H11 H N N 393 PPV H21 H N N 394 PPV H12 H N N 395 PPV H32 H N N 396 PRO N N N N 397 PRO CA C N S 398 PRO C C N N 399 PRO O O N N 400 PRO CB C N N 401 PRO CG C N N 402 PRO CD C N N 403 PRO OXT O N N 404 PRO H H N N 405 PRO HA H N N 406 PRO HB2 H N N 407 PRO HB3 H N N 408 PRO HG2 H N N 409 PRO HG3 H N N 410 PRO HD2 H N N 411 PRO HD3 H N N 412 PRO HXT H N N 413 SER N N N N 414 SER CA C N S 415 SER C C N N 416 SER O O N N 417 SER CB C N N 418 SER OG O N N 419 SER OXT O N N 420 SER H H N N 421 SER H2 H N N 422 SER HA H N N 423 SER HB2 H N N 424 SER HB3 H N N 425 SER HG H N N 426 SER HXT H N N 427 THR N N N N 428 THR CA C N S 429 THR C C N N 430 THR O O N N 431 THR CB C N R 432 THR OG1 O N N 433 THR CG2 C N N 434 THR OXT O N N 435 THR H H N N 436 THR H2 H N N 437 THR HA H N N 438 THR HB H N N 439 THR HG1 H N N 440 THR HG21 H N N 441 THR HG22 H N N 442 THR HG23 H N N 443 THR HXT H N N 444 TRP N N N N 445 TRP CA C N S 446 TRP C C N N 447 TRP O O N N 448 TRP CB C N N 449 TRP CG C Y N 450 TRP CD1 C Y N 451 TRP CD2 C Y N 452 TRP NE1 N Y N 453 TRP CE2 C Y N 454 TRP CE3 C Y N 455 TRP CZ2 C Y N 456 TRP CZ3 C Y N 457 TRP CH2 C Y N 458 TRP OXT O N N 459 TRP H H N N 460 TRP H2 H N N 461 TRP HA H N N 462 TRP HB2 H N N 463 TRP HB3 H N N 464 TRP HD1 H N N 465 TRP HE1 H N N 466 TRP HE3 H N N 467 TRP HZ2 H N N 468 TRP HZ3 H N N 469 TRP HH2 H N N 470 TRP HXT H N N 471 TYR N N N N 472 TYR CA C N S 473 TYR C C N N 474 TYR O O N N 475 TYR CB C N N 476 TYR CG C Y N 477 TYR CD1 C Y N 478 TYR CD2 C Y N 479 TYR CE1 C Y N 480 TYR CE2 C Y N 481 TYR CZ C Y N 482 TYR OH O N N 483 TYR OXT O N N 484 TYR H H N N 485 TYR H2 H N N 486 TYR HA H N N 487 TYR HB2 H N N 488 TYR HB3 H N N 489 TYR HD1 H N N 490 TYR HD2 H N N 491 TYR HE1 H N N 492 TYR HE2 H N N 493 TYR HH H N N 494 TYR HXT H N N 495 U OP3 O N N 496 U P P N N 497 U OP1 O N N 498 U OP2 O N N 499 U "O5'" O N N 500 U "C5'" C N N 501 U "C4'" C N R 502 U "O4'" O N N 503 U "C3'" C N S 504 U "O3'" O N N 505 U "C2'" C N R 506 U "O2'" O N N 507 U "C1'" C N R 508 U N1 N N N 509 U C2 C N N 510 U O2 O N N 511 U N3 N N N 512 U C4 C N N 513 U O4 O N N 514 U C5 C N N 515 U C6 C N N 516 U HOP3 H N N 517 U HOP2 H N N 518 U "H5'" H N N 519 U "H5''" H N N 520 U "H4'" H N N 521 U "H3'" H N N 522 U "HO3'" H N N 523 U "H2'" H N N 524 U "HO2'" H N N 525 U "H1'" H N N 526 U H3 H N N 527 U H5 H N N 528 U H6 H N N 529 UTP PA P N R 530 UTP O1A O N N 531 UTP O2A O N N 532 UTP O3A O N N 533 UTP "O5'" O N N 534 UTP PB P N S 535 UTP O1B O N N 536 UTP O2B O N N 537 UTP O3B O N N 538 UTP PG P N N 539 UTP O1G O N N 540 UTP O2G O N N 541 UTP O3G O N N 542 UTP "C5'" C N N 543 UTP "C4'" C N R 544 UTP "O4'" O N N 545 UTP "C1'" C N R 546 UTP "C2'" C N R 547 UTP "O2'" O N N 548 UTP "C3'" C N S 549 UTP "O3'" O N N 550 UTP N1 N Y N 551 UTP C6 C Y N 552 UTP C2 C Y N 553 UTP O2 O N N 554 UTP N3 N Y N 555 UTP C4 C Y N 556 UTP O4 O N N 557 UTP C5 C Y N 558 UTP H2A H N N 559 UTP H1B H N N 560 UTP H1G H N N 561 UTP H3G H N N 562 UTP "H5'1" H N N 563 UTP "H5'2" H N N 564 UTP "H4'" H N N 565 UTP "H1'" H N N 566 UTP "H2'" H N N 567 UTP HA H N N 568 UTP "H3'" H N N 569 UTP HB H N N 570 UTP H6 H N N 571 UTP H3 H N N 572 UTP H5 H N N 573 VAL N N N N 574 VAL CA C N S 575 VAL C C N N 576 VAL O O N N 577 VAL CB C N N 578 VAL CG1 C N N 579 VAL CG2 C N N 580 VAL OXT O N N 581 VAL H H N N 582 VAL H2 H N N 583 VAL HA H N N 584 VAL HB H N N 585 VAL HG11 H N N 586 VAL HG12 H N N 587 VAL HG13 H N N 588 VAL HG21 H N N 589 VAL HG22 H N N 590 VAL HG23 H N N 591 VAL HXT H N N 592 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 HOH O H1 sing N N 265 HOH O H2 sing N N 266 ILE N CA sing N N 267 ILE N H sing N N 268 ILE N H2 sing N N 269 ILE CA C sing N N 270 ILE CA CB sing N N 271 ILE CA HA sing N N 272 ILE C O doub N N 273 ILE C OXT sing N N 274 ILE CB CG1 sing N N 275 ILE CB CG2 sing N N 276 ILE CB HB sing N N 277 ILE CG1 CD1 sing N N 278 ILE CG1 HG12 sing N N 279 ILE CG1 HG13 sing N N 280 ILE CG2 HG21 sing N N 281 ILE CG2 HG22 sing N N 282 ILE CG2 HG23 sing N N 283 ILE CD1 HD11 sing N N 284 ILE CD1 HD12 sing N N 285 ILE CD1 HD13 sing N N 286 ILE OXT HXT sing N N 287 LEU N CA sing N N 288 LEU N H sing N N 289 LEU N H2 sing N N 290 LEU CA C sing N N 291 LEU CA CB sing N N 292 LEU CA HA sing N N 293 LEU C O doub N N 294 LEU C OXT sing N N 295 LEU CB CG sing N N 296 LEU CB HB2 sing N N 297 LEU CB HB3 sing N N 298 LEU CG CD1 sing N N 299 LEU CG CD2 sing N N 300 LEU CG HG sing N N 301 LEU CD1 HD11 sing N N 302 LEU CD1 HD12 sing N N 303 LEU CD1 HD13 sing N N 304 LEU CD2 HD21 sing N N 305 LEU CD2 HD22 sing N N 306 LEU CD2 HD23 sing N N 307 LEU OXT HXT sing N N 308 LYS N CA sing N N 309 LYS N H sing N N 310 LYS N H2 sing N N 311 LYS CA C sing N N 312 LYS CA CB sing N N 313 LYS CA HA sing N N 314 LYS C O doub N N 315 LYS C OXT sing N N 316 LYS CB CG sing N N 317 LYS CB HB2 sing N N 318 LYS CB HB3 sing N N 319 LYS CG CD sing N N 320 LYS CG HG2 sing N N 321 LYS CG HG3 sing N N 322 LYS CD CE sing N N 323 LYS CD HD2 sing N N 324 LYS CD HD3 sing N N 325 LYS CE NZ sing N N 326 LYS CE HE2 sing N N 327 LYS CE HE3 sing N N 328 LYS NZ HZ1 sing N N 329 LYS NZ HZ2 sing N N 330 LYS NZ HZ3 sing N N 331 LYS OXT HXT sing N N 332 MET N CA sing N N 333 MET N H sing N N 334 MET N H2 sing N N 335 MET CA C sing N N 336 MET CA CB sing N N 337 MET CA HA sing N N 338 MET C O doub N N 339 MET C OXT sing N N 340 MET CB CG sing N N 341 MET CB HB2 sing N N 342 MET CB HB3 sing N N 343 MET CG SD sing N N 344 MET CG HG2 sing N N 345 MET CG HG3 sing N N 346 MET SD CE sing N N 347 MET CE HE1 sing N N 348 MET CE HE2 sing N N 349 MET CE HE3 sing N N 350 MET OXT HXT sing N N 351 PHE N CA sing N N 352 PHE N H sing N N 353 PHE N H2 sing N N 354 PHE CA C sing N N 355 PHE CA CB sing N N 356 PHE CA HA sing N N 357 PHE C O doub N N 358 PHE C OXT sing N N 359 PHE CB CG sing N N 360 PHE CB HB2 sing N N 361 PHE CB HB3 sing N N 362 PHE CG CD1 doub Y N 363 PHE CG CD2 sing Y N 364 PHE CD1 CE1 sing Y N 365 PHE CD1 HD1 sing N N 366 PHE CD2 CE2 doub Y N 367 PHE CD2 HD2 sing N N 368 PHE CE1 CZ doub Y N 369 PHE CE1 HE1 sing N N 370 PHE CE2 CZ sing Y N 371 PHE CE2 HE2 sing N N 372 PHE CZ HZ sing N N 373 PHE OXT HXT sing N N 374 PPV O11 P1 sing N N 375 PPV O11 H11 sing N N 376 PPV P1 O21 sing N N 377 PPV P1 O31 doub N N 378 PPV P1 OPP sing N N 379 PPV O21 H21 sing N N 380 PPV OPP P2 sing N N 381 PPV P2 O12 sing N N 382 PPV P2 O22 doub N N 383 PPV P2 O32 sing N N 384 PPV O12 H12 sing N N 385 PPV O32 H32 sing N N 386 PRO N CA sing N N 387 PRO N CD sing N N 388 PRO N H sing N N 389 PRO CA C sing N N 390 PRO CA CB sing N N 391 PRO CA HA sing N N 392 PRO C O doub N N 393 PRO C OXT sing N N 394 PRO CB CG sing N N 395 PRO CB HB2 sing N N 396 PRO CB HB3 sing N N 397 PRO CG CD sing N N 398 PRO CG HG2 sing N N 399 PRO CG HG3 sing N N 400 PRO CD HD2 sing N N 401 PRO CD HD3 sing N N 402 PRO OXT HXT sing N N 403 SER N CA sing N N 404 SER N H sing N N 405 SER N H2 sing N N 406 SER CA C sing N N 407 SER CA CB sing N N 408 SER CA HA sing N N 409 SER C O doub N N 410 SER C OXT sing N N 411 SER CB OG sing N N 412 SER CB HB2 sing N N 413 SER CB HB3 sing N N 414 SER OG HG sing N N 415 SER OXT HXT sing N N 416 THR N CA sing N N 417 THR N H sing N N 418 THR N H2 sing N N 419 THR CA C sing N N 420 THR CA CB sing N N 421 THR CA HA sing N N 422 THR C O doub N N 423 THR C OXT sing N N 424 THR CB OG1 sing N N 425 THR CB CG2 sing N N 426 THR CB HB sing N N 427 THR OG1 HG1 sing N N 428 THR CG2 HG21 sing N N 429 THR CG2 HG22 sing N N 430 THR CG2 HG23 sing N N 431 THR OXT HXT sing N N 432 TRP N CA sing N N 433 TRP N H sing N N 434 TRP N H2 sing N N 435 TRP CA C sing N N 436 TRP CA CB sing N N 437 TRP CA HA sing N N 438 TRP C O doub N N 439 TRP C OXT sing N N 440 TRP CB CG sing N N 441 TRP CB HB2 sing N N 442 TRP CB HB3 sing N N 443 TRP CG CD1 doub Y N 444 TRP CG CD2 sing Y N 445 TRP CD1 NE1 sing Y N 446 TRP CD1 HD1 sing N N 447 TRP CD2 CE2 doub Y N 448 TRP CD2 CE3 sing Y N 449 TRP NE1 CE2 sing Y N 450 TRP NE1 HE1 sing N N 451 TRP CE2 CZ2 sing Y N 452 TRP CE3 CZ3 doub Y N 453 TRP CE3 HE3 sing N N 454 TRP CZ2 CH2 doub Y N 455 TRP CZ2 HZ2 sing N N 456 TRP CZ3 CH2 sing Y N 457 TRP CZ3 HZ3 sing N N 458 TRP CH2 HH2 sing N N 459 TRP OXT HXT sing N N 460 TYR N CA sing N N 461 TYR N H sing N N 462 TYR N H2 sing N N 463 TYR CA C sing N N 464 TYR CA CB sing N N 465 TYR CA HA sing N N 466 TYR C O doub N N 467 TYR C OXT sing N N 468 TYR CB CG sing N N 469 TYR CB HB2 sing N N 470 TYR CB HB3 sing N N 471 TYR CG CD1 doub Y N 472 TYR CG CD2 sing Y N 473 TYR CD1 CE1 sing Y N 474 TYR CD1 HD1 sing N N 475 TYR CD2 CE2 doub Y N 476 TYR CD2 HD2 sing N N 477 TYR CE1 CZ doub Y N 478 TYR CE1 HE1 sing N N 479 TYR CE2 CZ sing Y N 480 TYR CE2 HE2 sing N N 481 TYR CZ OH sing N N 482 TYR OH HH sing N N 483 TYR OXT HXT sing N N 484 U OP3 P sing N N 485 U OP3 HOP3 sing N N 486 U P OP1 doub N N 487 U P OP2 sing N N 488 U P "O5'" sing N N 489 U OP2 HOP2 sing N N 490 U "O5'" "C5'" sing N N 491 U "C5'" "C4'" sing N N 492 U "C5'" "H5'" sing N N 493 U "C5'" "H5''" sing N N 494 U "C4'" "O4'" sing N N 495 U "C4'" "C3'" sing N N 496 U "C4'" "H4'" sing N N 497 U "O4'" "C1'" sing N N 498 U "C3'" "O3'" sing N N 499 U "C3'" "C2'" sing N N 500 U "C3'" "H3'" sing N N 501 U "O3'" "HO3'" sing N N 502 U "C2'" "O2'" sing N N 503 U "C2'" "C1'" sing N N 504 U "C2'" "H2'" sing N N 505 U "O2'" "HO2'" sing N N 506 U "C1'" N1 sing N N 507 U "C1'" "H1'" sing N N 508 U N1 C2 sing N N 509 U N1 C6 sing N N 510 U C2 O2 doub N N 511 U C2 N3 sing N N 512 U N3 C4 sing N N 513 U N3 H3 sing N N 514 U C4 O4 doub N N 515 U C4 C5 sing N N 516 U C5 C6 doub N N 517 U C5 H5 sing N N 518 U C6 H6 sing N N 519 UTP PA O1A doub N N 520 UTP PA O2A sing N N 521 UTP PA O3A sing N N 522 UTP PA "O5'" sing N N 523 UTP O2A H2A sing N N 524 UTP O3A PB sing N N 525 UTP "O5'" "C5'" sing N N 526 UTP PB O1B sing N N 527 UTP PB O2B doub N N 528 UTP PB O3B sing N N 529 UTP O1B H1B sing N N 530 UTP O3B PG sing N N 531 UTP PG O1G sing N N 532 UTP PG O2G doub N N 533 UTP PG O3G sing N N 534 UTP O1G H1G sing N N 535 UTP O3G H3G sing N N 536 UTP "C5'" "C4'" sing N N 537 UTP "C5'" "H5'1" sing N N 538 UTP "C5'" "H5'2" sing N N 539 UTP "C4'" "O4'" sing N N 540 UTP "C4'" "C3'" sing N N 541 UTP "C4'" "H4'" sing N N 542 UTP "O4'" "C1'" sing N N 543 UTP "C1'" "C2'" sing N N 544 UTP "C1'" N1 sing N N 545 UTP "C1'" "H1'" sing N N 546 UTP "C2'" "O2'" sing N N 547 UTP "C2'" "C3'" sing N N 548 UTP "C2'" "H2'" sing N N 549 UTP "O2'" HA sing N N 550 UTP "C3'" "O3'" sing N N 551 UTP "C3'" "H3'" sing N N 552 UTP "O3'" HB sing N N 553 UTP N1 C6 sing Y N 554 UTP N1 C2 sing Y N 555 UTP C6 C5 doub Y N 556 UTP C6 H6 sing N N 557 UTP C2 O2 doub N N 558 UTP C2 N3 sing Y N 559 UTP N3 C4 sing Y N 560 UTP N3 H3 sing N N 561 UTP C4 O4 doub N N 562 UTP C4 C5 sing Y N 563 UTP C5 H5 sing N N 564 VAL N CA sing N N 565 VAL N H sing N N 566 VAL N H2 sing N N 567 VAL CA C sing N N 568 VAL CA CB sing N N 569 VAL CA HA sing N N 570 VAL C O doub N N 571 VAL C OXT sing N N 572 VAL CB CG1 sing N N 573 VAL CB CG2 sing N N 574 VAL CB HB sing N N 575 VAL CG1 HG11 sing N N 576 VAL CG1 HG12 sing N N 577 VAL CG1 HG13 sing N N 578 VAL CG2 HG21 sing N N 579 VAL CG2 HG22 sing N N 580 VAL CG2 HG23 sing N N 581 VAL OXT HXT sing N N 582 # _ndb_struct_conf_na.entry_id 2E9Z _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A U 3 1_555 B A 7 1_555 -0.815 -0.070 0.721 -9.270 -23.899 20.206 1 B_U904:A921_C B 904 ? C 921 ? ? 1 1 A G 4 1_555 B C 6 1_555 0.422 0.182 0.465 -4.199 -8.619 11.012 2 B_G905:C920_C B 905 ? C 920 ? ? 1 1 A G 5 1_555 B C 5 1_555 -1.072 -0.260 0.561 5.329 -4.365 -0.254 3 B_G906:C919_C B 906 ? C 919 ? 19 1 1 A G 6 1_555 B C 4 1_555 0.741 0.555 0.498 4.261 -15.087 17.587 4 B_G907:C918_C B 907 ? C 918 ? ? 1 1 A C 7 1_555 B G 3 1_555 1.295 -0.134 0.245 2.364 -8.346 6.461 5 B_C908:G917_C B 908 ? C 917 ? 19 1 1 A C 8 1_555 B G 2 1_555 3.366 -1.379 -1.080 -11.379 -14.984 -11.748 6 B_C909:G916_C B 909 ? C 916 ? ? ? 1 A C 9 1_555 B G 1 1_555 3.417 -1.103 -1.172 17.851 18.791 -4.760 7 B_C910:G915_C B 910 ? C 915 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A U 3 1_555 B A 7 1_555 A G 4 1_555 B C 6 1_555 -0.365 -0.782 2.752 -0.735 15.327 34.908 -2.755 0.486 2.235 24.159 1.158 38.036 1 BB_U904G905:C920A921_CC B 904 ? C 921 ? B 905 ? C 920 ? 1 A G 4 1_555 B C 6 1_555 A G 5 1_555 B C 5 1_555 -0.538 -1.458 2.896 -2.430 5.572 24.359 -4.744 0.632 2.544 12.948 5.646 25.094 2 BB_G905G906:C919C920_CC B 905 ? C 920 ? B 906 ? C 919 ? 1 A G 5 1_555 B C 5 1_555 A G 6 1_555 B C 4 1_555 1.269 -0.737 3.271 2.005 6.366 39.872 -1.777 -1.613 3.178 9.257 -2.916 40.404 3 BB_G906G907:C918C919_CC B 906 ? C 919 ? B 907 ? C 918 ? 1 A G 6 1_555 B C 4 1_555 A C 7 1_555 B G 3 1_555 -0.552 -1.542 3.336 -0.131 -0.120 33.279 -2.672 0.941 3.344 -0.210 0.228 33.280 4 BB_G907C908:G917C918_CC B 907 ? C 918 ? B 908 ? C 917 ? 1 A C 7 1_555 B G 3 1_555 A C 8 1_555 B G 2 1_555 -1.166 -1.384 3.792 8.483 4.331 43.807 -2.254 2.387 3.376 5.724 -11.212 44.781 5 BB_C908C909:G916G917_CC B 908 ? C 917 ? B 909 ? C 916 ? 1 A C 8 1_555 B G 2 1_555 A C 9 1_555 B G 1 1_555 1.000 -2.764 3.028 -0.037 -0.854 24.954 -6.153 -2.323 3.118 -1.976 0.086 24.968 6 BB_C909C910:G915G916_CC B 909 ? C 916 ? B 910 ? C 915 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MAGNESIUM ION' MG 5 ;URIDINE 5'-TRIPHOSPHATE ; UTP 6 PYROPHOSPHATE PPV 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1WNE _pdbx_initial_refinement_model.details 'PDB entry 1WNE' #