HEADER CELL ADHESION 09-FEB-07 2EC3 TITLE SOLUTION STRUCTURE OF THE 11TH FN1 DOMAIN FROM HUMAN FIBRONECTIN 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBRONECTIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FIBRONECTIN TYPE-I; COMPND 5 SYNONYM: FN, COLD-INSOLUBLE GLOBULIN, CIG; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FN1; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P060403-18; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS COMPLEMENT MODULE, TWO DISULFIDE BONDS, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, KEYWDS 3 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, CELL ADHESION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR R.SANO,F.HAYASHI,K.IZUMI,M.YOSHIDA,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 16-OCT-24 2EC3 1 REMARK REVDAT 3 09-MAR-22 2EC3 1 REMARK SEQADV REVDAT 2 24-FEB-09 2EC3 1 VERSN REVDAT 1 04-MAR-08 2EC3 0 JRNL AUTH R.SANO,F.HAYASHI,K.IZUMI,M.YOSHIDA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE 11TH FN1 DOMAIN FROM HUMAN JRNL TITL 2 FIBRONECTIN 1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DELTA NMR 4.3.2, CYANA 2.0.17 REMARK 3 AUTHORS : JEOL (DELTA NMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EC3 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1000026484. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.14 MM 13C, 15N-LABELED REMARK 210 PROTEIN; 20MM D-TRIS-HCL (PH7.0); REMARK 210 100MM NACL; 1MM D-DTT; 0.02% REMARK 210 NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : ECA REMARK 210 SPECTROMETER MANUFACTURER : JEOL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20060702, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9822, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 6 145.34 -174.34 REMARK 500 1 CYS A 14 173.34 -59.80 REMARK 500 1 ASP A 15 44.61 -101.18 REMARK 500 1 ASP A 22 -59.80 -130.59 REMARK 500 1 GLU A 31 172.26 -48.48 REMARK 500 1 GLN A 41 178.23 -59.21 REMARK 500 1 ALA A 62 48.62 -100.63 REMARK 500 1 THR A 63 44.79 -86.82 REMARK 500 2 TRP A 19 151.29 -40.60 REMARK 500 2 ASP A 22 -66.18 -104.18 REMARK 500 3 SER A 9 134.52 -174.85 REMARK 500 3 HIS A 11 42.11 36.80 REMARK 500 3 ARG A 18 76.98 -108.09 REMARK 500 3 HIS A 21 51.62 -116.84 REMARK 500 3 ASN A 26 74.83 -105.45 REMARK 500 3 GLU A 31 164.60 -48.03 REMARK 500 3 ASN A 39 42.03 -109.91 REMARK 500 3 GLN A 41 132.00 -38.22 REMARK 500 3 CYS A 47 88.37 -62.14 REMARK 500 3 LYS A 52 40.93 -89.29 REMARK 500 3 HIS A 60 140.78 -39.00 REMARK 500 3 CYS A 64 97.70 -63.43 REMARK 500 4 SER A 2 -52.91 -127.94 REMARK 500 4 ARG A 13 145.95 -170.38 REMARK 500 4 LYS A 52 38.41 34.47 REMARK 500 4 ASP A 66 33.74 71.04 REMARK 500 5 CYS A 14 43.73 34.61 REMARK 500 5 SER A 16 125.84 -171.67 REMARK 500 5 GLU A 31 174.67 -55.67 REMARK 500 6 CYS A 14 137.73 -38.65 REMARK 500 6 ARG A 18 47.01 -80.06 REMARK 500 6 ASP A 22 -66.29 -129.58 REMARK 500 6 ASN A 50 43.44 -97.55 REMARK 500 6 CYS A 64 160.87 -49.52 REMARK 500 7 PHE A 12 -60.93 -96.51 REMARK 500 7 ARG A 18 41.28 -102.87 REMARK 500 7 ASN A 39 -68.99 -105.13 REMARK 500 8 SER A 17 115.01 -173.45 REMARK 500 8 HIS A 21 47.77 -82.95 REMARK 500 8 GLU A 31 172.39 -54.22 REMARK 500 8 LYS A 52 39.99 -86.34 REMARK 500 8 PHE A 55 147.73 -170.75 REMARK 500 9 ILE A 29 104.54 -58.68 REMARK 500 9 GLU A 31 173.60 -58.26 REMARK 500 9 GLN A 41 135.06 -38.46 REMARK 500 9 GLU A 54 149.86 -34.44 REMARK 500 10 SER A 3 111.86 -35.92 REMARK 500 10 CYS A 14 43.70 -82.25 REMARK 500 10 SER A 16 119.79 -163.13 REMARK 500 10 GLU A 31 173.55 -50.74 REMARK 500 REMARK 500 THIS ENTRY HAS 111 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSI002005967.1 RELATED DB: TARGETDB DBREF 2EC3 A 8 68 UNP P02751 FINC_HUMAN 2239 2299 SEQADV 2EC3 GLY A 1 UNP P02751 EXPRESSION TAG SEQADV 2EC3 SER A 2 UNP P02751 EXPRESSION TAG SEQADV 2EC3 SER A 3 UNP P02751 EXPRESSION TAG SEQADV 2EC3 GLY A 4 UNP P02751 EXPRESSION TAG SEQADV 2EC3 SER A 5 UNP P02751 EXPRESSION TAG SEQADV 2EC3 SER A 6 UNP P02751 EXPRESSION TAG SEQADV 2EC3 GLY A 7 UNP P02751 EXPRESSION TAG SEQRES 1 A 68 GLY SER SER GLY SER SER GLY GLY SER GLY HIS PHE ARG SEQRES 2 A 68 CYS ASP SER SER ARG TRP CYS HIS ASP ASN GLY VAL ASN SEQRES 3 A 68 TYR LYS ILE GLY GLU LYS TRP ASP ARG GLN GLY GLU ASN SEQRES 4 A 68 GLY GLN MET MET SER CYS THR CYS LEU GLY ASN GLY LYS SEQRES 5 A 68 GLY GLU PHE LYS CYS ASP PRO HIS GLU ALA THR CYS TYR SEQRES 6 A 68 ASP ASP GLY SHEET 1 A 3 LYS A 32 GLN A 36 0 SHEET 2 A 3 MET A 42 GLY A 49 -1 O CYS A 45 N TRP A 33 SHEET 3 A 3 GLU A 54 PRO A 59 -1 O GLU A 54 N GLY A 49 SSBOND 1 CYS A 20 CYS A 47 1555 1555 2.00 SSBOND 2 CYS A 45 CYS A 57 1555 1555 2.06 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1