HEADER CONTRACTILE PROTEIN 14-FEB-07 2EDF TITLE SOLUTION STRUCTURE OF THE SECOND IG-LIKE DOMAIN(2826-2915) FROM HUMAN TITLE 2 OBSCURIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: OBSCURIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: IG-LIKE DOMAIN; COMPND 5 SYNONYM: OBSCURIN-MYOSIN LIGHT CHAIN KINASE, OBSCURIN-MLCK, OBSCURIN- COMPND 6 RHOGEF; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: OBSCN; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P051216-03; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS BETA-SANDWICH, IG-FOLD, OBSCURIN-MYOSIN LIGHT CHAIN KINASE, OBSCURIN- KEYWDS 2 MLCK, OBSCURIN-RHOGEF, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT KEYWDS 3 ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 4 GENOMICS/PROTEOMICS INITIATIVE, RSGI, CONTRACTILE PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.WAKABAYASHI,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2EDF 1 REMARK SEQADV REVDAT 2 24-FEB-09 2EDF 1 VERSN REVDAT 1 14-AUG-07 2EDF 0 JRNL AUTH M.WAKABAYASHI,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE SECOND IG-LIKE DOMAIN(2826-2915) JRNL TITL 2 FROM HUMAN OBSCURIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 2.0.17 REMARK 3 AUTHORS : VARIAN (VNMR), GUNTERT.P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EDF COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1000026526. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.14MM 13C, 15N-LAVELED PROTEIN; REMARK 210 20MM D-TRIS-HCL (PH7.0);100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; 10% REMARK 210 D2O, 90% H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9815, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 5 138.67 -38.79 REMARK 500 1 PRO A 8 -178.49 -69.77 REMARK 500 1 LEU A 15 -176.62 -66.99 REMARK 500 1 PRO A 22 85.20 -69.71 REMARK 500 1 THR A 61 42.80 36.99 REMARK 500 1 ILE A 67 74.92 -106.78 REMARK 500 1 GLU A 83 -71.25 -30.97 REMARK 500 2 SER A 3 155.15 -43.92 REMARK 500 2 ALA A 10 164.34 -47.80 REMARK 500 2 PRO A 22 87.62 -69.72 REMARK 500 2 GLN A 52 -36.97 -34.51 REMARK 500 2 PRO A 100 89.01 -69.71 REMARK 500 3 ALA A 9 44.66 -84.38 REMARK 500 3 PRO A 22 87.08 -69.74 REMARK 500 3 ASP A 44 51.73 72.44 REMARK 500 3 GLU A 59 79.93 -108.58 REMARK 500 3 THR A 61 40.70 -105.71 REMARK 500 3 LEU A 72 -38.59 -39.84 REMARK 500 3 GLU A 83 -70.06 -29.30 REMARK 500 3 LYS A 96 129.32 -35.56 REMARK 500 4 PRO A 22 84.65 -69.82 REMARK 500 4 GLU A 83 -67.59 -28.80 REMARK 500 4 LYS A 86 128.24 -170.12 REMARK 500 5 ALA A 10 -179.97 -62.02 REMARK 500 5 PRO A 22 92.18 -69.77 REMARK 500 5 THR A 61 39.80 -97.89 REMARK 500 5 ILE A 67 77.31 -109.29 REMARK 500 5 LEU A 72 -37.73 -38.69 REMARK 500 5 GLU A 83 -71.98 -28.52 REMARK 500 6 PRO A 8 -175.06 -69.75 REMARK 500 6 ALA A 10 154.38 -36.76 REMARK 500 6 PRO A 22 92.24 -69.83 REMARK 500 6 LYS A 50 137.93 -38.74 REMARK 500 6 GLN A 52 -38.98 -35.08 REMARK 500 6 GLU A 59 48.21 -101.21 REMARK 500 6 THR A 61 37.94 -89.52 REMARK 500 6 ILE A 67 76.35 -118.49 REMARK 500 6 ASP A 74 -36.02 -39.23 REMARK 500 6 GLU A 83 -72.05 -29.74 REMARK 500 6 SER A 101 125.65 -35.61 REMARK 500 7 ALA A 10 158.69 -42.70 REMARK 500 7 LEU A 15 -179.48 -66.50 REMARK 500 7 PRO A 22 86.72 -69.72 REMARK 500 7 ALA A 35 39.30 -86.63 REMARK 500 7 THR A 61 42.31 39.54 REMARK 500 7 ILE A 67 77.15 -119.96 REMARK 500 7 LEU A 72 -34.04 -39.52 REMARK 500 7 GLU A 83 -72.04 -28.53 REMARK 500 7 LYS A 86 149.44 -175.69 REMARK 500 8 SER A 5 87.93 -56.88 REMARK 500 REMARK 500 THIS ENTRY HAS 133 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002001528.6 RELATED DB: TARGETDB DBREF 2EDF A 8 97 UNP Q5VST9 OBSCN_HUMAN 2826 2915 SEQADV 2EDF GLY A 1 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDF SER A 2 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDF SER A 3 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDF GLY A 4 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDF SER A 5 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDF SER A 6 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDF GLY A 7 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDF SER A 98 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDF GLY A 99 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDF PRO A 100 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDF SER A 101 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDF SER A 102 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDF GLY A 103 UNP Q5VST9 CLONING ARTIFACT SEQRES 1 A 103 GLY SER SER GLY SER SER GLY PRO ALA ALA ILE ILE LYS SEQRES 2 A 103 PRO LEU GLU ASP GLN TRP VAL ALA PRO GLY GLU ASP VAL SEQRES 3 A 103 GLU LEU ARG CYS GLU LEU SER ARG ALA GLY THR PRO VAL SEQRES 4 A 103 HIS TRP LEU LYS ASP ARG LYS ALA ILE ARG LYS SER GLN SEQRES 5 A 103 LYS TYR ASP VAL VAL CYS GLU GLY THR MET ALA MET LEU SEQRES 6 A 103 VAL ILE ARG GLY ALA SER LEU LYS ASP ALA GLY GLU TYR SEQRES 7 A 103 THR CYS GLU VAL GLU ALA SER LYS SER THR ALA SER LEU SEQRES 8 A 103 HIS VAL GLU GLU LYS ALA SER GLY PRO SER SER GLY SHEET 1 A 2 ILE A 11 LYS A 13 0 SHEET 2 A 2 GLU A 31 LEU A 32 -1 O GLU A 31 N ILE A 12 SHEET 1 B 4 GLN A 18 VAL A 20 0 SHEET 2 B 4 LYS A 86 VAL A 93 1 O HIS A 92 N GLN A 18 SHEET 3 B 4 GLU A 77 GLU A 81 -1 N CYS A 80 O SER A 87 SHEET 4 B 4 TRP A 41 LYS A 43 -1 N LEU A 42 O THR A 79 SHEET 1 C 3 VAL A 26 LEU A 28 0 SHEET 2 C 3 MET A 62 ILE A 67 -1 O ILE A 67 N VAL A 26 SHEET 3 C 3 TYR A 54 GLU A 59 -1 N GLU A 59 O MET A 62 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1