HEADER CONTRACTILE PROTEIN 14-FEB-07 2EDH TITLE SOLUTION STRUCTURE OF THE PDZ DOMAIN (3614- 3713 ) FROM HUMAN OBSCURIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: OBSCURIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: IG; COMPND 5 SYNONYM: OBSCURIN-MYOSIN LIGHT CHAIN KINASE, OBSCURIN-MLCK, OBSCURIN- COMPND 6 RHOGEF; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: OBSCN; SOURCE 6 EXPRESSION_SYSTEM: CELL FREE PROTEIN SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P051017-21 KEYWDS OBSCURIN-MYOSIN LIGHT CHAIN KINASE, OBSCURIN-MLCK, OBSCURIN-RHOGEF, KEYWDS 2 IG-FOLD, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 3 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 4 GENOMICS/PROTEOMICS INITIATIVE, RSGI, CONTRACTILE PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.ENDO,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 14-MAR-12 2EDH 1 JRNL TITLE VERSN REVDAT 2 24-FEB-09 2EDH 1 VERSN REVDAT 1 14-AUG-07 2EDH 0 JRNL AUTH H.ENDO,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE PDZ DOMAIN (3614 - 3713 ) FROM JRNL TITL 2 HUMAN OBSCURIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EDH COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-FEB-07. REMARK 100 THE RCSB ID CODE IS RCSB026528. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.67MM 13C,15N-LABELED PROTEIN; REMARK 210 20MM D-TRIS-HCL(PH 7.0), 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; 10% REMARK 210 D2O, 90% H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N- REMARK 210 SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, NMRPIPE 20060702, REMARK 210 NMRVIEW 5.0.4, KUJIRA 0.9820, REMARK 210 CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 10 98.49 -172.18 REMARK 500 1 LEU A 18 160.67 62.97 REMARK 500 1 ASN A 28 103.34 -57.25 REMARK 500 1 HIS A 55 30.78 -150.19 REMARK 500 1 ASP A 62 -71.84 -86.21 REMARK 500 1 VAL A 81 -76.69 -165.82 REMARK 500 1 ALA A 82 -34.12 179.96 REMARK 500 1 LYS A 94 -54.97 -121.51 REMARK 500 2 SER A 3 178.67 60.73 REMARK 500 2 SER A 6 77.50 59.18 REMARK 500 2 THR A 9 -64.62 -140.88 REMARK 500 2 ALA A 11 -64.31 -161.41 REMARK 500 2 LEU A 13 40.82 -156.55 REMARK 500 2 ARG A 16 -176.38 60.97 REMARK 500 2 ALA A 17 168.04 62.15 REMARK 500 2 LEU A 18 160.67 63.07 REMARK 500 2 PRO A 19 -179.14 -69.80 REMARK 500 2 VAL A 81 -76.75 -163.21 REMARK 500 2 ALA A 82 -34.11 179.89 REMARK 500 2 CYS A 90 94.09 -160.71 REMARK 500 2 LYS A 94 -54.93 -130.61 REMARK 500 2 SER A 108 -67.67 -90.53 REMARK 500 2 SER A 111 37.29 -167.15 REMARK 500 3 SER A 10 100.05 -177.86 REMARK 500 3 ALA A 11 142.84 -173.70 REMARK 500 3 VAL A 15 151.90 65.19 REMARK 500 3 LEU A 18 160.69 63.14 REMARK 500 3 ALA A 35 -173.39 -67.33 REMARK 500 3 VAL A 81 -76.74 -148.19 REMARK 500 3 ALA A 82 -34.08 179.99 REMARK 500 3 CYS A 90 86.18 -169.47 REMARK 500 3 LYS A 94 -54.99 -131.00 REMARK 500 3 PRO A 107 -176.25 -69.78 REMARK 500 3 PRO A 110 98.79 -69.81 REMARK 500 4 SER A 3 -60.50 -132.39 REMARK 500 4 SER A 5 103.01 -163.17 REMARK 500 4 SER A 6 88.44 -175.18 REMARK 500 4 THR A 9 -65.15 -121.74 REMARK 500 4 SER A 10 -172.19 60.13 REMARK 500 4 GLU A 24 74.89 -155.14 REMARK 500 4 VAL A 81 -76.67 -162.22 REMARK 500 4 ALA A 82 -34.15 179.95 REMARK 500 4 CYS A 90 91.93 -166.38 REMARK 500 4 LYS A 94 -50.14 -122.59 REMARK 500 4 SER A 111 30.97 -96.32 REMARK 500 5 ARG A 8 43.43 -141.05 REMARK 500 5 THR A 9 81.39 61.73 REMARK 500 5 LEU A 13 44.70 -142.12 REMARK 500 5 VAL A 15 172.56 -59.70 REMARK 500 5 ARG A 16 91.51 58.50 REMARK 500 REMARK 500 THIS ENTRY HAS 229 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002001528.12 RELATED DB: TARGETDB DBREF 2EDH A 8 107 UNP Q5VST9 OBSCN_HUMAN 3614 3713 SEQADV 2EDH GLY A 1 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDH SER A 2 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDH SER A 3 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDH GLY A 4 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDH SER A 5 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDH SER A 6 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDH GLY A 7 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDH SER A 108 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDH GLY A 109 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDH PRO A 110 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDH SER A 111 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDH SER A 112 UNP Q5VST9 CLONING ARTIFACT SEQADV 2EDH GLY A 113 UNP Q5VST9 CLONING ARTIFACT SEQRES 1 A 113 GLY SER SER GLY SER SER GLY ARG THR SER ALA MET LEU SEQRES 2 A 113 THR VAL ARG ALA LEU PRO ILE LYS PHE THR GLU GLY LEU SEQRES 3 A 113 ARG ASN GLU GLU ALA THR GLU GLY ALA THR ALA VAL LEU SEQRES 4 A 113 ARG CYS GLU LEU SER LYS MET ALA PRO VAL GLU TRP TRP SEQRES 5 A 113 LYS GLY HIS GLU THR LEU ARG ASP GLY ASP ARG HIS SER SEQRES 6 A 113 LEU ARG GLN ASP GLY ALA ARG CYS GLU LEU GLN ILE ARG SEQRES 7 A 113 GLY LEU VAL ALA GLU ASP ALA GLY GLU TYR LEU CYS MET SEQRES 8 A 113 CYS GLY LYS GLU ARG THR SER ALA MET LEU THR VAL ARG SEQRES 9 A 113 ALA MET PRO SER GLY PRO SER SER GLY SHEET 1 A 4 PHE A 22 GLU A 24 0 SHEET 2 A 4 ALA A 37 LEU A 43 -1 O GLU A 42 N GLU A 24 SHEET 3 A 4 ARG A 72 ILE A 77 -1 O ILE A 77 N ALA A 37 SHEET 4 A 4 HIS A 64 ASP A 69 -1 N SER A 65 O GLN A 76 SHEET 1 B 4 GLU A 30 ALA A 31 0 SHEET 2 B 4 GLU A 95 VAL A 103 1 O THR A 102 N ALA A 31 SHEET 3 B 4 GLY A 86 CYS A 92 -1 N CYS A 90 O THR A 97 SHEET 4 B 4 GLU A 50 LYS A 53 -1 N TRP A 52 O LEU A 89 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1