HEADER STRUCTURAL PROTEIN 14-FEB-07 2EDP TITLE SOLUTION STRUCTURE OF THE PDZ DOMAIN FROM HUMAN SHROOM FAMILY MEMBER 4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SHROOM FAMILY MEMBER 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PDZ DOMAIN; COMPND 5 SYNONYM: FRAGMENT; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KIAA1202; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P050627-31; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS APX/SHROOM FAMILY MEMBER, KIAA1202 PROTEIN, STRUCTURAL GENOMICS, KEYWDS 2 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 STRUCTURAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.ENDO,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2EDP 1 REMARK SEQADV REVDAT 2 24-FEB-09 2EDP 1 VERSN REVDAT 1 14-AUG-07 2EDP 0 JRNL AUTH H.ENDO,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE PDZ DOMAIN FROM HUMAN SHROOM JRNL TITL 2 FAMILY MEMBER 4 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 2.0.17 REMARK 3 AUTHORS : VARIAN (VNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EDP COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1000026536. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.20MM 13C, 15N-LEBELED PROTEIN; REMARK 210 20MM D-TRIS-HCL(PH7.0); 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3, 10% REMARK 210 D2O; 90% H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20060702, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 36 93.56 -69.77 REMARK 500 1 LEU A 37 99.12 -38.24 REMARK 500 1 VAL A 39 129.11 -37.72 REMARK 500 1 THR A 56 103.72 -47.48 REMARK 500 1 ARG A 72 -62.42 -109.52 REMARK 500 1 GLN A 73 -72.37 -35.35 REMARK 500 1 GLU A 74 -39.96 -38.66 REMARK 500 1 ALA A 75 -74.63 -63.74 REMARK 500 1 LYS A 80 -39.69 -32.89 REMARK 500 2 SER A 6 108.93 -44.75 REMARK 500 2 PRO A 14 96.95 -69.72 REMARK 500 2 ALA A 21 163.12 -48.60 REMARK 500 2 CYS A 34 33.45 70.35 REMARK 500 2 PRO A 36 97.96 -69.75 REMARK 500 2 LEU A 37 96.55 -40.18 REMARK 500 2 VAL A 39 133.00 -37.93 REMARK 500 2 TYR A 69 -36.05 -132.42 REMARK 500 2 SER A 71 144.46 -39.48 REMARK 500 2 ALA A 75 -72.01 -45.89 REMARK 500 2 SER A 82 143.89 -32.55 REMARK 500 2 PHE A 83 -74.47 -116.31 REMARK 500 2 ARG A 93 130.68 -38.04 REMARK 500 3 SER A 2 94.65 -68.41 REMARK 500 3 PRO A 14 82.74 -69.66 REMARK 500 3 CYS A 34 45.76 39.00 REMARK 500 3 LEU A 37 95.90 -59.00 REMARK 500 3 VAL A 39 132.90 -36.61 REMARK 500 3 THR A 56 104.38 -40.18 REMARK 500 3 SER A 71 151.67 -44.90 REMARK 500 3 ARG A 72 -60.45 -97.84 REMARK 500 3 ALA A 75 -75.22 -52.67 REMARK 500 3 LYS A 80 -39.12 -33.91 REMARK 500 3 SER A 82 -176.68 -68.20 REMARK 500 3 ARG A 93 116.95 -39.10 REMARK 500 3 PRO A 97 2.13 -69.84 REMARK 500 4 PRO A 14 84.26 -69.76 REMARK 500 4 VAL A 15 87.64 -69.02 REMARK 500 4 ALA A 21 166.93 -48.42 REMARK 500 4 LEU A 37 89.68 -56.01 REMARK 500 4 VAL A 39 121.37 -36.25 REMARK 500 4 PRO A 67 97.52 -69.74 REMARK 500 4 LEU A 68 174.27 -54.43 REMARK 500 4 SER A 71 133.19 -38.56 REMARK 500 4 GLN A 73 -70.94 -34.20 REMARK 500 4 ALA A 75 -75.32 -54.72 REMARK 500 4 SER A 82 140.61 -32.32 REMARK 500 4 PHE A 83 -74.99 -109.15 REMARK 500 5 SER A 2 95.65 -59.62 REMARK 500 5 PRO A 14 94.33 -69.80 REMARK 500 5 CYS A 34 46.03 38.63 REMARK 500 REMARK 500 THIS ENTRY HAS 232 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002101176.1 RELATED DB: TARGETDB DBREF 2EDP A 8 94 UNP Q9ULL8 Q9ULL8_HUMAN 10 96 SEQADV 2EDP GLY A 1 UNP Q9ULL8 CLONING ARTIFACT SEQADV 2EDP SER A 2 UNP Q9ULL8 CLONING ARTIFACT SEQADV 2EDP SER A 3 UNP Q9ULL8 CLONING ARTIFACT SEQADV 2EDP GLY A 4 UNP Q9ULL8 CLONING ARTIFACT SEQADV 2EDP SER A 5 UNP Q9ULL8 CLONING ARTIFACT SEQADV 2EDP SER A 6 UNP Q9ULL8 CLONING ARTIFACT SEQADV 2EDP GLY A 7 UNP Q9ULL8 CLONING ARTIFACT SEQADV 2EDP SER A 95 UNP Q9ULL8 CLONING ARTIFACT SEQADV 2EDP GLY A 96 UNP Q9ULL8 CLONING ARTIFACT SEQADV 2EDP PRO A 97 UNP Q9ULL8 CLONING ARTIFACT SEQADV 2EDP SER A 98 UNP Q9ULL8 CLONING ARTIFACT SEQADV 2EDP SER A 99 UNP Q9ULL8 CLONING ARTIFACT SEQADV 2EDP GLY A 100 UNP Q9ULL8 CLONING ARTIFACT SEQRES 1 A 100 GLY SER SER GLY SER SER GLY GLY SER PHE GLN TYR VAL SEQRES 2 A 100 PRO VAL GLN LEU GLN GLY GLY ALA PRO TRP GLY PHE THR SEQRES 3 A 100 LEU LYS GLY GLY LEU GLU HIS CYS GLU PRO LEU THR VAL SEQRES 4 A 100 SER LYS ILE GLU ASP GLY GLY LYS ALA ALA LEU SER GLN SEQRES 5 A 100 LYS MET ARG THR GLY ASP GLU LEU VAL ASN ILE ASN GLY SEQRES 6 A 100 THR PRO LEU TYR GLY SER ARG GLN GLU ALA LEU ILE LEU SEQRES 7 A 100 ILE LYS GLY SER PHE ARG ILE LEU LYS LEU ILE VAL ARG SEQRES 8 A 100 ARG ARG ASN SER GLY PRO SER SER GLY HELIX 1 1 LEU A 31 CYS A 34 5 4 HELIX 2 2 GLY A 46 GLN A 52 1 7 HELIX 3 3 ARG A 72 GLY A 81 1 10 SHEET 1 A 4 GLN A 11 GLN A 16 0 SHEET 2 A 4 LYS A 87 ARG A 92 -1 O VAL A 90 N VAL A 13 SHEET 3 A 4 GLU A 59 ILE A 63 -1 N GLU A 59 O ARG A 91 SHEET 4 A 4 THR A 66 PRO A 67 -1 O THR A 66 N ILE A 63 SHEET 1 B 2 LEU A 27 GLY A 30 0 SHEET 2 B 2 GLU A 35 VAL A 39 -1 O GLU A 35 N GLY A 30 CISPEP 1 ALA A 21 PRO A 22 1 0.02 CISPEP 2 ALA A 21 PRO A 22 2 -0.01 CISPEP 3 ALA A 21 PRO A 22 3 0.02 CISPEP 4 ALA A 21 PRO A 22 4 0.03 CISPEP 5 ALA A 21 PRO A 22 5 -0.01 CISPEP 6 ALA A 21 PRO A 22 6 -0.03 CISPEP 7 ALA A 21 PRO A 22 7 -0.05 CISPEP 8 ALA A 21 PRO A 22 8 -0.04 CISPEP 9 ALA A 21 PRO A 22 9 -0.05 CISPEP 10 ALA A 21 PRO A 22 10 0.00 CISPEP 11 ALA A 21 PRO A 22 11 -0.05 CISPEP 12 ALA A 21 PRO A 22 12 0.02 CISPEP 13 ALA A 21 PRO A 22 13 -0.01 CISPEP 14 ALA A 21 PRO A 22 14 0.03 CISPEP 15 ALA A 21 PRO A 22 15 0.09 CISPEP 16 ALA A 21 PRO A 22 16 -0.10 CISPEP 17 ALA A 21 PRO A 22 17 -0.02 CISPEP 18 ALA A 21 PRO A 22 18 -0.04 CISPEP 19 ALA A 21 PRO A 22 19 0.03 CISPEP 20 ALA A 21 PRO A 22 20 0.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1