HEADER SIGNALING PROTEIN 15-FEB-07 2EE2 TITLE SOLUTION STRUCTURES OF THE FN3 DOMAIN OF HUMAN CONTACTIN 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONTACTIN-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FIBRONECTIN TYPE III DOMAIN; COMPND 5 SYNONYM: NEURAL CELL SURFACE PROTEIN F3, GLYCOPROTEIN GP135; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CNTN1; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P050711-22; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS NEURAL CELL SURFACE PROTEIN F3, GLYCOPROTEIN GP135, STRUCTURAL KEYWDS 2 GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND KEYWDS 3 FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 4 INITIATIVE, RSGI, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.SATO,N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 29-MAY-24 2EE2 1 REMARK REVDAT 3 09-MAR-22 2EE2 1 REMARK SEQADV REVDAT 2 24-FEB-09 2EE2 1 VERSN REVDAT 1 21-AUG-07 2EE2 0 JRNL AUTH M.SATO,N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURES OF THE FN3 DOMAIN OF HUMAN CONTACTIN 1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EE2 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1000026549. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM FN3 DOMAIN U-15N, 13C; 20MM REMARK 210 D-TRIS HCL; 100MM NACL; 1MM D- REMARK 210 DTT; 0.02% NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW REMARK 210 2.0.17, KUJIRA 0.932, CYANA REMARK 210 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 8 123.25 -33.98 REMARK 500 1 ASN A 65 174.37 -58.40 REMARK 500 1 ALA A 97 -73.60 -83.01 REMARK 500 1 SER A 117 110.58 -36.97 REMARK 500 2 SER A 5 146.80 -39.11 REMARK 500 2 VAL A 8 122.64 -39.19 REMARK 500 2 ALA A 9 110.92 -171.25 REMARK 500 2 SER A 49 -179.74 -171.05 REMARK 500 2 ASP A 84 53.54 35.34 REMARK 500 2 CYS A 94 139.47 -172.20 REMARK 500 3 ASP A 16 -175.36 -171.70 REMARK 500 3 ASP A 59 173.36 -57.84 REMARK 500 3 ASP A 84 50.48 38.97 REMARK 500 3 CYS A 94 145.95 -173.07 REMARK 500 3 ALA A 97 -71.24 -82.74 REMARK 500 3 PRO A 116 89.08 -69.81 REMARK 500 4 ASN A 12 133.57 -39.48 REMARK 500 4 PRO A 22 97.63 -69.80 REMARK 500 4 GLU A 73 99.24 -63.92 REMARK 500 4 ASP A 84 48.93 39.82 REMARK 500 4 ALA A 97 -70.20 -68.31 REMARK 500 4 THR A 110 173.99 -57.33 REMARK 500 4 SER A 114 177.40 -49.55 REMARK 500 4 PRO A 116 96.99 -69.77 REMARK 500 5 ASP A 59 173.19 -52.89 REMARK 500 5 ALA A 97 -71.36 -68.47 REMARK 500 5 ALA A 113 140.81 -35.37 REMARK 500 6 ALA A 9 116.02 -172.97 REMARK 500 6 PRO A 22 95.04 -69.76 REMARK 500 6 THR A 70 146.15 -34.29 REMARK 500 6 ALA A 97 -72.03 -59.06 REMARK 500 7 SER A 6 44.82 36.70 REMARK 500 7 ALA A 9 139.49 -170.23 REMARK 500 7 TYR A 54 135.29 -175.20 REMARK 500 7 ASP A 84 51.80 35.76 REMARK 500 7 ALA A 97 -74.41 -75.37 REMARK 500 7 ALA A 113 93.47 -59.76 REMARK 500 8 SER A 6 42.01 -105.35 REMARK 500 8 ALA A 57 -39.69 -39.51 REMARK 500 8 MET A 105 103.61 -58.49 REMARK 500 9 ALA A 9 117.91 -163.91 REMARK 500 9 ASP A 84 48.62 34.53 REMARK 500 9 ALA A 97 -72.95 -62.70 REMARK 500 10 ILE A 11 43.90 -85.91 REMARK 500 10 ASN A 80 42.46 71.57 REMARK 500 10 ALA A 97 -73.65 -76.43 REMARK 500 10 SER A 103 -178.42 -56.71 REMARK 500 10 ALA A 113 36.47 34.18 REMARK 500 11 ASP A 16 -179.41 -171.08 REMARK 500 11 ALA A 97 -74.69 -68.67 REMARK 500 REMARK 500 THIS ENTRY HAS 99 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK003001294.1 RELATED DB: TARGETDB DBREF 2EE2 A 8 113 UNP Q12860 CNTN1_HUMAN 798 903 SEQADV 2EE2 GLY A 1 UNP Q12860 EXPRESSION TAG SEQADV 2EE2 SER A 2 UNP Q12860 EXPRESSION TAG SEQADV 2EE2 SER A 3 UNP Q12860 EXPRESSION TAG SEQADV 2EE2 GLY A 4 UNP Q12860 EXPRESSION TAG SEQADV 2EE2 SER A 5 UNP Q12860 EXPRESSION TAG SEQADV 2EE2 SER A 6 UNP Q12860 EXPRESSION TAG SEQADV 2EE2 GLY A 7 UNP Q12860 EXPRESSION TAG SEQADV 2EE2 SER A 114 UNP Q12860 EXPRESSION TAG SEQADV 2EE2 GLY A 115 UNP Q12860 EXPRESSION TAG SEQADV 2EE2 PRO A 116 UNP Q12860 EXPRESSION TAG SEQADV 2EE2 SER A 117 UNP Q12860 EXPRESSION TAG SEQADV 2EE2 SER A 118 UNP Q12860 EXPRESSION TAG SEQADV 2EE2 GLY A 119 UNP Q12860 EXPRESSION TAG SEQRES 1 A 119 GLY SER SER GLY SER SER GLY VAL ALA VAL ILE ASN SER SEQRES 2 A 119 ALA GLN ASP ALA PRO SER GLU ALA PRO THR GLU VAL GLY SEQRES 3 A 119 VAL LYS VAL LEU SER SER SER GLU ILE SER VAL HIS TRP SEQRES 4 A 119 GLU HIS VAL LEU GLU LYS ILE VAL GLU SER TYR GLN ILE SEQRES 5 A 119 ARG TYR TRP ALA ALA HIS ASP LYS GLU GLU ALA ALA ASN SEQRES 6 A 119 ARG VAL GLN VAL THR SER GLN GLU TYR SER ALA ARG LEU SEQRES 7 A 119 GLU ASN LEU LEU PRO ASP THR GLN TYR PHE ILE GLU VAL SEQRES 8 A 119 GLY ALA CYS ASN SER ALA GLY CYS GLY PRO PRO SER ASP SEQRES 9 A 119 MET ILE GLU ALA PHE THR LYS LYS ALA SER GLY PRO SER SEQRES 10 A 119 SER GLY HELIX 1 1 LYS A 60 ALA A 64 5 5 SHEET 1 A 3 GLY A 26 SER A 31 0 SHEET 2 A 3 GLU A 34 HIS A 38 -1 O SER A 36 N LYS A 28 SHEET 3 A 3 SER A 75 LEU A 78 -1 O LEU A 78 N ILE A 35 SHEET 1 B 4 ASN A 65 THR A 70 0 SHEET 2 B 4 SER A 49 ALA A 56 -1 N ILE A 52 O VAL A 67 SHEET 3 B 4 GLN A 86 CYS A 94 -1 O GLY A 92 N GLN A 51 SHEET 4 B 4 ILE A 106 PHE A 109 -1 O ALA A 108 N TYR A 87 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1