HEADER SIGNALING PROTEIN 15-FEB-07 2EE3 TITLE SOLUTION STRUCTURES OF THE FN3 DOMAIN OF HUMAN COLLAGEN ALPHA-1(XX) TITLE 2 CHAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: COLLAGEN ALPHA-1(XX) CHAIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FIBRONECTIN TYPE III DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: COL20A1; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P051216-01; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS KIAA1510, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 2 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.SATO,N.TOCHIO,S.KOSHIBA,S.WATANABE,T.HARADA,T.KIGAWA,S.YOKOYAMA, AUTHOR 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2EE3 1 REMARK SEQADV REVDAT 2 24-FEB-09 2EE3 1 VERSN REVDAT 1 21-AUG-07 2EE3 0 JRNL AUTH M.SATO,N.TOCHIO,S.KOSHIBA,S.WATANABE,T.HARADA,T.KIGAWA, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURES OF THE FN3 DOMAIN OF HUMAN COLLAGEN JRNL TITL 2 ALPHA-1(XX) CHAIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EE3 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1000026550. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM FN3 DOMAIN U-15N,13C; 20MM D REMARK 210 -TRIS HCL; 100MM NACL; 1MM D-DTT; REMARK 210 0.02% NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW REMARK 210 2.0.17, KUJIRA 0.932, CYANA REMARK 210 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 5 118.24 -175.01 REMARK 500 1 ASP A 18 29.77 48.57 REMARK 500 1 SER A 45 172.86 -46.90 REMARK 500 1 GLN A 52 119.01 -165.69 REMARK 500 1 PRO A 82 88.11 -69.77 REMARK 500 2 PRO A 32 0.51 -69.76 REMARK 500 2 GLU A 46 42.39 -80.81 REMARK 500 2 GLN A 52 110.64 -172.41 REMARK 500 2 PRO A 99 -177.96 -69.73 REMARK 500 3 LEU A 8 143.21 -172.14 REMARK 500 3 PRO A 32 2.08 -69.75 REMARK 500 3 GLN A 52 123.72 -172.14 REMARK 500 3 SER A 86 149.03 -173.92 REMARK 500 3 PRO A 99 97.91 -69.75 REMARK 500 4 SER A 2 124.21 -172.97 REMARK 500 4 ALA A 9 146.88 -170.19 REMARK 500 4 PRO A 32 2.90 -69.79 REMARK 500 4 SER A 44 -177.87 -69.15 REMARK 500 4 GLU A 46 36.32 -85.38 REMARK 500 4 PRO A 101 85.46 -69.76 REMARK 500 5 LEU A 8 148.17 -39.01 REMARK 500 5 PRO A 32 1.67 -69.79 REMARK 500 5 SER A 44 176.17 -59.45 REMARK 500 5 GLN A 52 147.60 -171.59 REMARK 500 5 SER A 86 146.46 -173.86 REMARK 500 5 SER A 102 144.20 -35.73 REMARK 500 5 PRO A 105 93.61 -69.78 REMARK 500 6 SER A 5 49.20 -84.69 REMARK 500 6 LEU A 8 149.97 -36.76 REMARK 500 6 GLU A 46 44.16 -84.27 REMARK 500 6 SER A 102 37.07 35.06 REMARK 500 7 ASP A 18 37.41 38.35 REMARK 500 7 SER A 61 133.62 -174.05 REMARK 500 7 SER A 70 29.82 45.94 REMARK 500 7 PRO A 105 85.14 -69.80 REMARK 500 7 SER A 107 121.84 -39.27 REMARK 500 8 SER A 6 53.43 35.57 REMARK 500 8 ASP A 18 30.39 38.62 REMARK 500 8 SER A 44 179.91 -59.89 REMARK 500 8 GLN A 52 123.04 -171.46 REMARK 500 8 SER A 70 28.81 39.78 REMARK 500 8 SER A 102 47.82 -81.50 REMARK 500 8 SER A 106 48.59 35.38 REMARK 500 9 ASP A 18 37.28 37.00 REMARK 500 9 GLU A 46 35.64 37.73 REMARK 500 9 SER A 86 142.00 -170.77 REMARK 500 9 THR A 95 161.54 -44.64 REMARK 500 9 PRO A 101 97.21 -69.75 REMARK 500 9 SER A 102 140.23 -34.52 REMARK 500 10 ASP A 18 26.94 49.24 REMARK 500 REMARK 500 THIS ENTRY HAS 100 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002101482.2 RELATED DB: TARGETDB DBREF 2EE3 A 8 102 UNP Q9P218 COKA1_HUMAN 564 658 SEQADV 2EE3 GLY A 1 UNP Q9P218 EXPRESSION TAG SEQADV 2EE3 SER A 2 UNP Q9P218 EXPRESSION TAG SEQADV 2EE3 SER A 3 UNP Q9P218 EXPRESSION TAG SEQADV 2EE3 GLY A 4 UNP Q9P218 EXPRESSION TAG SEQADV 2EE3 SER A 5 UNP Q9P218 EXPRESSION TAG SEQADV 2EE3 SER A 6 UNP Q9P218 EXPRESSION TAG SEQADV 2EE3 GLY A 7 UNP Q9P218 EXPRESSION TAG SEQADV 2EE3 SER A 103 UNP Q9P218 EXPRESSION TAG SEQADV 2EE3 GLY A 104 UNP Q9P218 EXPRESSION TAG SEQADV 2EE3 PRO A 105 UNP Q9P218 EXPRESSION TAG SEQADV 2EE3 SER A 106 UNP Q9P218 EXPRESSION TAG SEQADV 2EE3 SER A 107 UNP Q9P218 EXPRESSION TAG SEQADV 2EE3 GLY A 108 UNP Q9P218 EXPRESSION TAG SEQRES 1 A 108 GLY SER SER GLY SER SER GLY LEU ALA PRO PRO ARG HIS SEQRES 2 A 108 LEU GLY PHE SER ASP VAL SER HIS ASP ALA ALA ARG VAL SEQRES 3 A 108 PHE TRP GLU GLY ALA PRO ARG PRO VAL ARG LEU VAL ARG SEQRES 4 A 108 VAL THR TYR VAL SER SER GLU GLY GLY HIS SER GLY GLN SEQRES 5 A 108 THR GLU ALA PRO GLY ASN ALA THR SER ALA MET LEU GLY SEQRES 6 A 108 PRO LEU SER SER SER THR THR TYR THR VAL ARG VAL THR SEQRES 7 A 108 CYS LEU TYR PRO GLY GLY GLY SER SER THR LEU THR GLY SEQRES 8 A 108 ARG VAL THR THR LYS LYS ALA PRO SER PRO SER SER GLY SEQRES 9 A 108 PRO SER SER GLY SHEET 1 A 3 LEU A 14 SER A 17 0 SHEET 2 A 3 ALA A 24 TRP A 28 -1 O PHE A 27 N GLY A 15 SHEET 3 A 3 SER A 61 LEU A 64 -1 O ALA A 62 N VAL A 26 SHEET 1 B 4 THR A 53 PRO A 56 0 SHEET 2 B 4 LEU A 37 SER A 44 -1 N VAL A 38 O ALA A 55 SHEET 3 B 4 THR A 72 LEU A 80 -1 O THR A 74 N VAL A 43 SHEET 4 B 4 SER A 86 THR A 94 -1 O GLY A 91 N VAL A 75 CISPEP 1 GLY A 65 PRO A 66 1 0.03 CISPEP 2 GLY A 65 PRO A 66 2 0.01 CISPEP 3 GLY A 65 PRO A 66 3 0.09 CISPEP 4 GLY A 65 PRO A 66 4 0.08 CISPEP 5 GLY A 65 PRO A 66 5 -0.07 CISPEP 6 GLY A 65 PRO A 66 6 0.01 CISPEP 7 GLY A 65 PRO A 66 7 0.04 CISPEP 8 GLY A 65 PRO A 66 8 0.05 CISPEP 9 GLY A 65 PRO A 66 9 0.00 CISPEP 10 GLY A 65 PRO A 66 10 0.11 CISPEP 11 GLY A 65 PRO A 66 11 0.04 CISPEP 12 GLY A 65 PRO A 66 12 0.07 CISPEP 13 GLY A 65 PRO A 66 13 0.09 CISPEP 14 GLY A 65 PRO A 66 14 0.00 CISPEP 15 GLY A 65 PRO A 66 15 0.10 CISPEP 16 GLY A 65 PRO A 66 16 0.08 CISPEP 17 GLY A 65 PRO A 66 17 0.05 CISPEP 18 GLY A 65 PRO A 66 18 0.04 CISPEP 19 GLY A 65 PRO A 66 19 0.10 CISPEP 20 GLY A 65 PRO A 66 20 0.09 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1