data_2EEB # _entry.id 2EEB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2EEB pdb_00002eeb 10.2210/pdb2eeb/pdb RCSB RCSB026558 ? ? WWPDB D_1000026558 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk003002600.14 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2EEB _pdbx_database_status.recvd_initial_deposition_date 2007-02-15 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tomizawa, T.' 1 'Koshiba, S.' 2 'Watanabe, S.' 3 'Harada, T.' 4 'Kigawa, T.' 5 'Yokoyama, S.' 6 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 7 # _citation.id primary _citation.title 'Solution structure of the 22th filamin domain from human Filamin-B' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tomizawa, T.' 1 ? primary 'Koshiba, S.' 2 ? primary 'Watanabe, S.' 3 ? primary 'Harada, T.' 4 ? primary 'Kigawa, T.' 5 ? primary 'Yokoyama, S.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description Filamin-B _entity.formula_weight 11140.415 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'filamin domain, Filamin 22' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name ;FLN-B, Beta-filamin, Actin-binding-like protein, Thyroid autoantigen, Truncated actin-binding protein, Truncated ABP, ABP- 280 homolog, ABP-278, Filamin 3, Filamin homolog 1, Fh1 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGSDDARRLTVMSLQESGLKVNQPASFAIRLNGAKGKIDAKVHSPSGAVEECHVSELEPDKYAVRFIPHENGVHT IDVKFNGSHVVGSPFKVRVGEPGQAG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGSDDARRLTVMSLQESGLKVNQPASFAIRLNGAKGKIDAKVHSPSGAVEECHVSELEPDKYAVRFIPHENGVHT IDVKFNGSHVVGSPFKVRVGEPGQAG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk003002600.14 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 SER n 1 9 ASP n 1 10 ASP n 1 11 ALA n 1 12 ARG n 1 13 ARG n 1 14 LEU n 1 15 THR n 1 16 VAL n 1 17 MET n 1 18 SER n 1 19 LEU n 1 20 GLN n 1 21 GLU n 1 22 SER n 1 23 GLY n 1 24 LEU n 1 25 LYS n 1 26 VAL n 1 27 ASN n 1 28 GLN n 1 29 PRO n 1 30 ALA n 1 31 SER n 1 32 PHE n 1 33 ALA n 1 34 ILE n 1 35 ARG n 1 36 LEU n 1 37 ASN n 1 38 GLY n 1 39 ALA n 1 40 LYS n 1 41 GLY n 1 42 LYS n 1 43 ILE n 1 44 ASP n 1 45 ALA n 1 46 LYS n 1 47 VAL n 1 48 HIS n 1 49 SER n 1 50 PRO n 1 51 SER n 1 52 GLY n 1 53 ALA n 1 54 VAL n 1 55 GLU n 1 56 GLU n 1 57 CYS n 1 58 HIS n 1 59 VAL n 1 60 SER n 1 61 GLU n 1 62 LEU n 1 63 GLU n 1 64 PRO n 1 65 ASP n 1 66 LYS n 1 67 TYR n 1 68 ALA n 1 69 VAL n 1 70 ARG n 1 71 PHE n 1 72 ILE n 1 73 PRO n 1 74 HIS n 1 75 GLU n 1 76 ASN n 1 77 GLY n 1 78 VAL n 1 79 HIS n 1 80 THR n 1 81 ILE n 1 82 ASP n 1 83 VAL n 1 84 LYS n 1 85 PHE n 1 86 ASN n 1 87 GLY n 1 88 SER n 1 89 HIS n 1 90 VAL n 1 91 VAL n 1 92 GLY n 1 93 SER n 1 94 PRO n 1 95 PHE n 1 96 LYS n 1 97 VAL n 1 98 ARG n 1 99 VAL n 1 100 GLY n 1 101 GLU n 1 102 PRO n 1 103 GLY n 1 104 GLN n 1 105 ALA n 1 106 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene FLNB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P060619-17 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FLNB_HUMAN _struct_ref.pdbx_db_accession O75369 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SDDARRLTVMSLQESGLKVNQPASFAIRLNGAKGKIDAKVHSPSGAVEECHVSELEPDKYAVRFIPHENGVHTIDVKFNG SHVVGSPFKVRVGEPGQAG ; _struct_ref.pdbx_align_begin 2284 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2EEB _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 106 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O75369 _struct_ref_seq.db_align_beg 2284 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 2382 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 106 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2EEB GLY A 1 ? UNP O75369 ? ? 'expression tag' 1 1 1 2EEB SER A 2 ? UNP O75369 ? ? 'expression tag' 2 2 1 2EEB SER A 3 ? UNP O75369 ? ? 'expression tag' 3 3 1 2EEB GLY A 4 ? UNP O75369 ? ? 'expression tag' 4 4 1 2EEB SER A 5 ? UNP O75369 ? ? 'expression tag' 5 5 1 2EEB SER A 6 ? UNP O75369 ? ? 'expression tag' 6 6 1 2EEB GLY A 7 ? UNP O75369 ? ? 'expression tag' 7 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_13C-separated_NOESY 1 2 1 3D_15N-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 296 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.20mM filamin domain U-15N,13C; 20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O, 90% H2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE II' _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 900 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2EEB _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2EEB _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, structures with the lowest energy, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2EEB _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection TopSpin 1.3 Bruker 1 processing NMRPipe 20060524 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9823 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2EEB _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2EEB _struct.title 'Solution structure of the 22th filamin domain from human Filamin-B' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2EEB _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' _struct_keywords.text ;beta-sandwich, immunoglobulin-like fold, filamin, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, STRUCTURAL PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 1 0.01 2 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 2 -0.05 3 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 3 0.02 4 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 4 -0.02 5 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 5 0.02 6 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 6 -0.02 7 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 7 -0.08 8 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 8 -0.06 9 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 9 -0.07 10 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 10 0.00 11 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 11 -0.02 12 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 12 -0.08 13 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 13 0.01 14 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 14 0.02 15 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 15 0.00 16 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 16 -0.03 17 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 17 -0.08 18 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 18 0.00 19 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 19 0.06 20 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 20 -0.03 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 14 ? MET A 17 ? LEU A 14 MET A 17 A 2 ALA A 30 ? LEU A 36 ? ALA A 30 LEU A 36 A 3 LYS A 66 ? PHE A 71 ? LYS A 66 PHE A 71 A 4 HIS A 58 ? GLU A 61 ? HIS A 58 GLU A 61 B 1 VAL A 54 ? GLU A 56 ? VAL A 54 GLU A 56 B 2 ASP A 44 ? HIS A 48 ? ASP A 44 HIS A 48 B 3 VAL A 78 ? LYS A 84 ? VAL A 78 LYS A 84 B 4 PHE A 95 ? ARG A 98 ? PHE A 95 ARG A 98 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 15 ? N THR A 15 O ARG A 35 ? O ARG A 35 A 2 3 N PHE A 32 ? N PHE A 32 O VAL A 69 ? O VAL A 69 A 3 4 O ARG A 70 ? O ARG A 70 N HIS A 58 ? N HIS A 58 B 1 2 O GLU A 55 ? O GLU A 55 N VAL A 47 ? N VAL A 47 B 2 3 N ASP A 44 ? N ASP A 44 O LYS A 84 ? O LYS A 84 B 3 4 N ILE A 81 ? N ILE A 81 O PHE A 95 ? O PHE A 95 # _database_PDB_matrix.entry_id 2EEB _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2EEB _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 MET 17 17 17 MET MET A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 GLN 20 20 20 GLN GLN A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 GLN 28 28 28 GLN GLN A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 PHE 32 32 32 PHE PHE A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 HIS 48 48 48 HIS HIS A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 CYS 57 57 57 CYS CYS A . n A 1 58 HIS 58 58 58 HIS HIS A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 PRO 64 64 64 PRO PRO A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 TYR 67 67 67 TYR TYR A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 HIS 74 74 74 HIS HIS A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 HIS 79 79 79 HIS HIS A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 HIS 89 89 89 HIS HIS A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 PHE 95 95 95 PHE PHE A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 GLU 101 101 101 GLU GLU A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 GLN 104 104 104 GLN GLN A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 GLY 106 106 106 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-08-21 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_struct_assembly 4 3 'Structure model' pdbx_struct_oper_list 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 8 ? ? -50.85 178.00 2 1 ASP A 10 ? ? -107.51 74.04 3 1 ARG A 13 ? ? -91.74 53.69 4 1 SER A 18 ? ? 35.40 54.59 5 1 PRO A 73 ? ? -69.76 87.35 6 1 SER A 88 ? ? -172.57 130.17 7 1 VAL A 90 ? ? -54.35 -176.18 8 1 PRO A 102 ? ? -69.78 93.71 9 2 ASP A 10 ? ? -109.46 40.70 10 2 SER A 18 ? ? 40.18 25.33 11 2 PRO A 73 ? ? -69.69 82.94 12 2 HIS A 89 ? ? -60.20 93.80 13 2 VAL A 90 ? ? -36.12 138.94 14 2 VAL A 91 ? ? -36.12 127.13 15 3 SER A 3 ? ? -90.37 51.76 16 3 SER A 5 ? ? -39.69 158.30 17 3 ASP A 10 ? ? -106.59 68.41 18 3 ARG A 13 ? ? -88.07 34.57 19 3 GLU A 21 ? ? -110.62 -74.05 20 3 PRO A 50 ? ? -69.69 1.65 21 3 PRO A 73 ? ? -69.77 82.54 22 3 SER A 88 ? ? -173.74 121.49 23 3 GLU A 101 ? ? -38.79 144.19 24 3 ALA A 105 ? ? -34.39 124.58 25 4 ASP A 9 ? ? -54.20 177.39 26 4 GLU A 21 ? ? -115.52 -71.30 27 4 HIS A 58 ? ? -59.49 105.04 28 4 PRO A 73 ? ? -69.73 80.73 29 4 SER A 88 ? ? -172.30 120.03 30 4 VAL A 90 ? ? -56.42 -178.09 31 4 ALA A 105 ? ? -51.02 102.16 32 5 SER A 6 ? ? -47.02 107.58 33 5 SER A 8 ? ? 35.59 44.13 34 5 LEU A 14 ? ? -37.94 138.55 35 5 GLU A 21 ? ? -115.49 -71.50 36 5 PRO A 73 ? ? -69.71 81.63 37 5 SER A 88 ? ? -172.77 122.87 38 6 ASP A 9 ? ? -55.63 179.47 39 6 ARG A 13 ? ? -95.61 55.49 40 6 PRO A 73 ? ? -69.72 86.75 41 6 SER A 88 ? ? -174.59 125.70 42 6 VAL A 90 ? ? -57.91 -178.18 43 6 GLN A 104 ? ? -172.17 112.62 44 7 ASP A 10 ? ? -82.35 48.14 45 7 ARG A 13 ? ? -95.96 49.78 46 7 GLU A 21 ? ? -100.10 -68.84 47 7 PRO A 73 ? ? -69.76 83.30 48 7 ASN A 86 ? ? 71.49 36.77 49 7 SER A 88 ? ? -172.22 121.43 50 7 VAL A 90 ? ? -51.60 -177.24 51 8 SER A 8 ? ? -36.17 116.74 52 8 ASP A 10 ? ? -101.89 55.54 53 8 ARG A 13 ? ? -104.62 50.33 54 8 SER A 18 ? ? 34.95 46.31 55 8 PRO A 73 ? ? -69.77 80.81 56 8 SER A 88 ? ? -174.47 130.03 57 8 VAL A 91 ? ? -38.06 145.27 58 9 ASP A 10 ? ? -102.65 41.68 59 9 LEU A 14 ? ? -34.34 141.03 60 9 ASN A 27 ? ? 40.66 29.62 61 9 PRO A 73 ? ? -69.68 85.21 62 9 SER A 88 ? ? -174.59 126.56 63 9 VAL A 90 ? ? -47.21 175.71 64 9 GLN A 104 ? ? -62.87 88.57 65 10 SER A 3 ? ? -39.18 111.51 66 10 ASP A 10 ? ? -110.22 65.94 67 10 SER A 18 ? ? 39.14 51.31 68 10 GLU A 21 ? ? -122.36 -66.58 69 10 PRO A 73 ? ? -69.77 81.43 70 10 ASN A 86 ? ? 72.04 42.19 71 10 VAL A 90 ? ? -50.56 -176.88 72 11 SER A 6 ? ? -103.94 -65.97 73 11 SER A 8 ? ? -43.64 155.79 74 11 ARG A 13 ? ? -107.29 53.49 75 11 SER A 18 ? ? 35.62 43.66 76 11 GLU A 21 ? ? -130.15 -67.21 77 11 PRO A 73 ? ? -69.86 80.64 78 11 VAL A 90 ? ? -52.47 178.92 79 11 PRO A 94 ? ? -69.74 -179.16 80 12 ASP A 10 ? ? -94.76 36.73 81 12 GLN A 20 ? ? -64.26 90.77 82 12 PRO A 50 ? ? -69.83 2.04 83 12 PRO A 73 ? ? -69.78 91.21 84 12 SER A 88 ? ? -174.47 120.61 85 12 VAL A 90 ? ? -42.80 165.73 86 12 PRO A 102 ? ? -69.76 95.56 87 13 ARG A 13 ? ? -94.71 53.45 88 13 PRO A 50 ? ? -69.77 2.29 89 13 PRO A 64 ? ? -69.84 2.53 90 13 PRO A 73 ? ? -69.76 80.75 91 13 SER A 88 ? ? -171.53 119.24 92 13 VAL A 90 ? ? -51.03 -177.85 93 14 ASP A 10 ? ? -114.32 72.78 94 14 ARG A 13 ? ? -92.65 43.19 95 14 SER A 18 ? ? 35.17 46.59 96 14 LEU A 24 ? ? -36.93 147.41 97 14 PRO A 73 ? ? -69.75 83.57 98 14 SER A 88 ? ? -163.29 118.96 99 14 VAL A 90 ? ? -42.53 161.66 100 15 ARG A 13 ? ? -97.29 49.19 101 15 GLU A 21 ? ? -105.20 -71.02 102 15 LYS A 40 ? ? -175.06 139.17 103 15 PRO A 73 ? ? -69.76 79.95 104 15 ASN A 86 ? ? 71.98 51.76 105 15 VAL A 90 ? ? -51.68 -175.05 106 16 SER A 5 ? ? -47.52 103.67 107 16 GLU A 21 ? ? -131.85 -41.68 108 16 PRO A 50 ? ? -69.69 1.26 109 16 PRO A 73 ? ? -69.73 79.97 110 16 SER A 88 ? ? -173.35 113.54 111 16 VAL A 90 ? ? -51.10 -175.95 112 17 SER A 6 ? ? 35.31 42.77 113 17 ASP A 10 ? ? -106.77 43.62 114 17 GLU A 21 ? ? -113.68 -70.57 115 17 HIS A 58 ? ? -59.10 106.18 116 17 PRO A 73 ? ? -69.77 80.28 117 17 SER A 88 ? ? -173.64 124.53 118 17 VAL A 90 ? ? -50.01 176.11 119 18 HIS A 58 ? ? -57.77 103.74 120 18 PRO A 73 ? ? -69.74 82.79 121 18 VAL A 91 ? ? -38.96 133.33 122 19 SER A 6 ? ? -45.94 150.52 123 19 SER A 8 ? ? -69.18 -178.44 124 19 SER A 18 ? ? 39.54 39.99 125 19 GLU A 21 ? ? -115.60 -73.51 126 19 PRO A 64 ? ? -69.72 1.55 127 19 PRO A 73 ? ? -69.77 88.04 128 19 ASN A 86 ? ? 71.44 30.37 129 19 SER A 88 ? ? -173.06 114.70 130 19 PRO A 102 ? ? -69.79 -169.69 131 20 SER A 3 ? ? -35.56 113.00 132 20 ASP A 10 ? ? -111.29 78.98 133 20 ASN A 27 ? ? 49.32 25.01 134 20 PRO A 73 ? ? -69.79 80.48 135 20 PRO A 94 ? ? -69.75 -179.97 136 20 ALA A 105 ? ? -36.37 120.41 #