HEADER GENE REGULATION 15-FEB-07 2EEE TITLE SOLUTION STRUCTURE OF THE A1PP DOMAIN FROM HUMAN PROTEIN C6ORF130 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN C6ORF130; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: A1PP DOMAIN; COMPND 5 SYNONYM: PROTEIN C6ORF130; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: C6ORF130; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P060821-05; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS MACRO DOMAIN, A1PP DOMAIN, ADP-RIBOSE BINDING, ROSSMANN FOLD, KEYWDS 2 STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL KEYWDS 3 AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 4 INITIATIVE, RSGI, GENE REGULATION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.TOMIZAWA,S.KOSHIBA,S.WATANABE,T.HARADA,T.KIGAWA,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2EEE 1 REMARK SEQADV REVDAT 2 24-FEB-09 2EEE 1 VERSN REVDAT 1 21-AUG-07 2EEE 0 JRNL AUTH T.TOMIZAWA,S.KOSHIBA,S.WATANABE,T.HARADA,T.KIGAWA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE A1PP DOMAIN FROM HUMAN PROTEIN JRNL TITL 2 C6ORF130 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EEE COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1000026561. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.22MM A1PP DOMAIN U-15N,13C; REMARK 210 20MM D-TRIS-HCL(PH 7.0); 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; 90% REMARK 210 H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20060524, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9823, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINTED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS,STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 17 163.98 -45.00 REMARK 500 1 CYS A 35 42.46 35.26 REMARK 500 1 MET A 37 83.33 -67.29 REMARK 500 1 ASP A 71 -67.68 -129.37 REMARK 500 1 SER A 102 -35.73 -39.63 REMARK 500 1 ASN A 107 -69.43 -91.30 REMARK 500 1 THR A 110 30.58 -98.80 REMARK 500 1 PRO A 115 -169.46 -69.78 REMARK 500 1 ARG A 123 -71.32 -44.93 REMARK 500 1 SER A 130 -35.62 -38.87 REMARK 500 1 ALA A 139 68.60 -117.75 REMARK 500 2 ASP A 17 156.53 -45.06 REMARK 500 2 ASP A 25 141.64 -35.50 REMARK 500 2 LEU A 44 -38.90 -33.87 REMARK 500 2 PHE A 49 -50.62 -127.20 REMARK 500 2 ASP A 71 41.84 36.19 REMARK 500 2 PRO A 115 -166.68 -69.71 REMARK 500 2 ARG A 123 32.87 -83.98 REMARK 500 3 ASP A 17 167.03 -44.67 REMARK 500 3 CYS A 35 43.46 35.30 REMARK 500 3 ASP A 71 -39.02 -31.74 REMARK 500 3 PRO A 115 -165.38 -69.77 REMARK 500 3 CYS A 119 106.48 -39.91 REMARK 500 3 TRP A 126 -37.71 -36.97 REMARK 500 3 ALA A 139 55.58 -101.11 REMARK 500 4 SER A 5 107.17 -49.06 REMARK 500 4 SER A 9 168.07 -47.23 REMARK 500 4 ASP A 17 164.89 -49.81 REMARK 500 4 THR A 24 -30.58 -131.22 REMARK 500 4 ASP A 25 153.69 -44.00 REMARK 500 4 CYS A 35 43.54 38.91 REMARK 500 4 MET A 37 76.56 -115.75 REMARK 500 4 ASN A 107 -71.96 -84.86 REMARK 500 4 PRO A 115 -167.10 -69.76 REMARK 500 4 ARG A 123 -74.05 -75.76 REMARK 500 4 TRP A 126 -36.94 -37.47 REMARK 500 4 ALA A 139 58.78 -118.15 REMARK 500 5 ASP A 17 160.05 -41.40 REMARK 500 5 PHE A 49 55.12 -113.00 REMARK 500 5 LYS A 60 -175.25 -63.00 REMARK 500 5 ARG A 70 -71.46 -114.83 REMARK 500 5 PRO A 115 -164.91 -69.78 REMARK 500 5 CYS A 119 151.51 -44.92 REMARK 500 5 ARG A 123 -71.17 -34.02 REMARK 500 5 ALA A 139 66.16 -119.09 REMARK 500 6 SER A 2 154.98 -44.66 REMARK 500 6 ASP A 25 142.03 -34.88 REMARK 500 6 GLU A 33 -33.34 -34.51 REMARK 500 6 ASP A 34 40.66 -82.28 REMARK 500 6 CYS A 35 36.09 33.54 REMARK 500 REMARK 500 THIS ENTRY HAS 168 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSI002013839.1 RELATED DB: TARGETDB DBREF 2EEE A 8 149 UNP Q9Y530 CF130_HUMAN 11 152 SEQADV 2EEE GLY A 1 UNP Q9Y530 EXPRESSION TAG SEQADV 2EEE SER A 2 UNP Q9Y530 EXPRESSION TAG SEQADV 2EEE SER A 3 UNP Q9Y530 EXPRESSION TAG SEQADV 2EEE GLY A 4 UNP Q9Y530 EXPRESSION TAG SEQADV 2EEE SER A 5 UNP Q9Y530 EXPRESSION TAG SEQADV 2EEE SER A 6 UNP Q9Y530 EXPRESSION TAG SEQADV 2EEE GLY A 7 UNP Q9Y530 EXPRESSION TAG SEQRES 1 A 149 GLY SER SER GLY SER SER GLY GLY SER ARG ILE THR TYR SEQRES 2 A 149 VAL LYS GLY ASP LEU PHE ALA CYS PRO LYS THR ASP SER SEQRES 3 A 149 LEU ALA HIS CYS ILE SER GLU ASP CYS ARG MET GLY ALA SEQRES 4 A 149 GLY ILE ALA VAL LEU PHE LYS LYS LYS PHE GLY GLY VAL SEQRES 5 A 149 GLN GLU LEU LEU ASN GLN GLN LYS LYS SER GLY GLU VAL SEQRES 6 A 149 ALA VAL LEU LYS ARG ASP GLY ARG TYR ILE TYR TYR LEU SEQRES 7 A 149 ILE THR LYS LYS ARG ALA SER HIS LYS PRO THR TYR GLU SEQRES 8 A 149 ASN LEU GLN LYS SER LEU GLU ALA MET LYS SER HIS CYS SEQRES 9 A 149 LEU LYS ASN GLY VAL THR ASP LEU SER MET PRO ARG ILE SEQRES 10 A 149 GLY CYS GLY LEU ASP ARG LEU GLN TRP GLU ASN VAL SER SEQRES 11 A 149 ALA MET ILE GLU GLU VAL PHE GLU ALA THR ASP ILE LYS SEQRES 12 A 149 ILE THR VAL TYR THR LEU HELIX 1 1 ILE A 41 PHE A 49 1 9 HELIX 2 2 GLY A 51 ASN A 57 1 7 HELIX 3 3 THR A 89 GLY A 108 1 20 HELIX 4 4 GLN A 125 GLU A 138 1 14 SHEET 1 A 6 THR A 12 VAL A 14 0 SHEET 2 A 6 LYS A 143 TYR A 147 1 O VAL A 146 N THR A 12 SHEET 3 A 6 ASP A 111 SER A 113 1 N LEU A 112 O LYS A 143 SHEET 4 A 6 SER A 26 SER A 32 1 N SER A 26 O SER A 113 SHEET 5 A 6 TYR A 74 LYS A 81 1 O LEU A 78 N ILE A 31 SHEET 6 A 6 VAL A 65 LYS A 69 -1 N LEU A 68 O ILE A 75 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1