HEADER SUGAR BINDING PROTEIN 15-FEB-07 2EEF TITLE SOLUTION STRUCTURE OF THE CBM_21 DOMAIN FROM HUMAN PROTEIN PHOSPHATASE TITLE 2 1, REGULATORY (INHIBITOR) SUBUNIT 3B COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN PHOSPHATASE 1, REGULATORY (INHIBITOR) SUBUNIT 3B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CBM_21 DOMAIN, RESIDUES 8-156; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PPP1R3B; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P060919-05; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS CBM_21 DOMAIN, CARBOHYDRATE BINDING DOMAIN, STRUCTURAL GENOMICS, KEYWDS 2 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 SUGAR BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.TOMIZAWA,S.KOSHIBA,S.WATANABE,T.HARADA,T.KIGAWA,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2EEF 1 REMARK SEQADV REVDAT 2 24-FEB-09 2EEF 1 VERSN REVDAT 1 21-AUG-07 2EEF 0 JRNL AUTH T.TOMIZAWA,S.KOSHIBA,S.WATANABE,T.HARADA,T.KIGAWA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE CBM_21 DOMAIN FROM HUMAN PROTEIN JRNL TITL 2 PHOSPHATASE 1, REGULATORY (INHIBITOR) SUBUNIT 3B JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN 1.3, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (TOPSPIN), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EEF COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1000026562. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.26MM FILAMIN DOMAIN U-15N,13C; REMARK 210 20MM D-TRIS-HCL(PH 7.0); 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; 10% REMARK 210 D2O, 90% H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE II REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20060524, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9823, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINTED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 8 143.24 -173.34 REMARK 500 1 GLN A 19 138.83 -39.13 REMARK 500 1 VAL A 36 141.00 -173.80 REMARK 500 1 LYS A 46 37.59 36.59 REMARK 500 1 THR A 71 47.69 33.15 REMARK 500 1 ALA A 88 135.59 -37.50 REMARK 500 1 SER A 107 43.97 -86.29 REMARK 500 1 ARG A 129 37.87 32.82 REMARK 500 1 LYS A 131 -68.50 -121.31 REMARK 500 2 GLU A 11 161.43 -45.04 REMARK 500 2 ASP A 16 33.72 -86.07 REMARK 500 2 VAL A 36 143.03 -175.17 REMARK 500 2 CYS A 37 149.09 -175.23 REMARK 500 2 LYS A 46 37.39 33.17 REMARK 500 2 ASN A 56 49.05 -80.04 REMARK 500 2 THR A 71 44.37 37.44 REMARK 500 2 SER A 74 119.40 -160.31 REMARK 500 2 TYR A 87 49.64 -83.11 REMARK 500 2 SER A 90 -60.65 -98.66 REMARK 500 2 GLN A 106 39.84 -86.59 REMARK 500 2 SER A 107 43.25 32.72 REMARK 500 2 ASN A 128 28.66 41.72 REMARK 500 2 ARG A 129 35.25 34.43 REMARK 500 2 LYS A 131 -75.52 -89.90 REMARK 500 2 LYS A 141 122.56 -172.12 REMARK 500 3 GLU A 9 100.44 -37.37 REMARK 500 3 ASP A 16 30.64 -94.53 REMARK 500 3 VAL A 36 144.79 -174.11 REMARK 500 3 LYS A 46 34.48 37.36 REMARK 500 3 ASN A 56 46.51 -81.08 REMARK 500 3 THR A 71 49.03 34.11 REMARK 500 3 ALA A 88 95.11 -54.00 REMARK 500 3 PRO A 102 -177.97 -69.79 REMARK 500 3 TYR A 108 -38.40 -35.06 REMARK 500 3 ASN A 128 37.49 31.15 REMARK 500 3 ARG A 129 53.24 35.38 REMARK 500 3 LYS A 148 140.04 -39.11 REMARK 500 4 VAL A 36 144.41 -175.23 REMARK 500 4 CYS A 37 139.16 -172.89 REMARK 500 4 GLU A 39 -74.83 -72.97 REMARK 500 4 THR A 71 45.26 33.03 REMARK 500 4 ASP A 91 -57.92 -123.42 REMARK 500 4 GLN A 106 25.94 38.79 REMARK 500 4 SER A 107 44.18 34.08 REMARK 500 4 ARG A 129 43.15 34.00 REMARK 500 4 LYS A 131 -72.99 -93.42 REMARK 500 4 SER A 142 164.90 -43.39 REMARK 500 4 PRO A 153 -175.27 -69.77 REMARK 500 5 ASP A 16 30.97 -89.30 REMARK 500 5 ALA A 22 -38.09 -35.08 REMARK 500 REMARK 500 THIS ENTRY HAS 280 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSO003013391.1 RELATED DB: TARGETDB DBREF 2EEF A 8 156 UNP Q86XI6 Q86XI6_HUMAN 105 253 SEQADV 2EEF GLY A 1 UNP Q86XI6 EXPRESSION TAG SEQADV 2EEF SER A 2 UNP Q86XI6 EXPRESSION TAG SEQADV 2EEF SER A 3 UNP Q86XI6 EXPRESSION TAG SEQADV 2EEF GLY A 4 UNP Q86XI6 EXPRESSION TAG SEQADV 2EEF SER A 5 UNP Q86XI6 EXPRESSION TAG SEQADV 2EEF SER A 6 UNP Q86XI6 EXPRESSION TAG SEQADV 2EEF GLY A 7 UNP Q86XI6 EXPRESSION TAG SEQRES 1 A 156 GLY SER SER GLY SER SER GLY ALA GLU SER GLU SER PHE SEQRES 2 A 156 VAL LEU ASP PHE SER GLN PRO SER ALA ASP TYR LEU ASP SEQRES 3 A 156 PHE ARG ASN ARG LEU GLN ALA ASP HIS VAL CYS LEU GLU SEQRES 4 A 156 ASN CYS VAL LEU LYS ASP LYS ALA ILE ALA GLY THR VAL SEQRES 5 A 156 LYS VAL GLN ASN LEU ALA PHE GLU LYS THR VAL LYS ILE SEQRES 6 A 156 ARG MET THR PHE ASP THR TRP LYS SER TYR THR ASP PHE SEQRES 7 A 156 PRO CYS GLN TYR VAL LYS ASP THR TYR ALA GLY SER ASP SEQRES 8 A 156 ARG ASP THR PHE SER PHE ASP ILE SER LEU PRO GLU LYS SEQRES 9 A 156 ILE GLN SER TYR GLU ARG MET GLU PHE ALA VAL TYR TYR SEQRES 10 A 156 GLU CYS ASN GLY GLN THR TYR TRP ASP SER ASN ARG GLY SEQRES 11 A 156 LYS ASN TYR ARG ILE ILE ARG ALA GLU LEU LYS SER THR SEQRES 12 A 156 GLN GLY MET THR LYS PRO HIS SER GLY PRO ASP LEU GLY HELIX 1 1 ASP A 23 ASP A 34 1 12 HELIX 2 2 SER A 127 LYS A 131 5 5 SHEET 1 A 2 PHE A 13 LEU A 15 0 SHEET 2 A 2 ILE A 135 ARG A 137 -1 O ILE A 136 N VAL A 14 SHEET 1 B 4 VAL A 36 LYS A 44 0 SHEET 2 B 4 ALA A 47 VAL A 54 -1 O ALA A 47 N LYS A 44 SHEET 3 B 4 THR A 94 PHE A 97 -1 O PHE A 95 N VAL A 52 SHEET 4 B 4 GLN A 81 TYR A 82 -1 N GLN A 81 O SER A 96 SHEET 1 C 4 TYR A 75 PRO A 79 0 SHEET 2 C 4 THR A 62 THR A 68 -1 N ILE A 65 O PHE A 78 SHEET 3 C 4 GLU A 112 CYS A 119 -1 O ALA A 114 N ARG A 66 SHEET 4 C 4 GLN A 122 ASP A 126 -1 O TYR A 124 N TYR A 117 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1