data_2EFI # _entry.id 2EFI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2EFI pdb_00002efi 10.2210/pdb2efi/pdb RCSB RCSB026600 ? ? WWPDB D_1000026600 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hso002001486.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2EFI _pdbx_database_status.recvd_initial_deposition_date 2007-02-22 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Li, H.' 1 'Sato, M.' 2 'Tochio, N.' 3 'Tomizawa, T.' 4 'Koshiba, S.' 5 'Harada, T.' 6 'Watanabe, S.' 7 'Kigawa, T.' 8 'Yokoyama, S.' 9 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 10 # _citation.id primary _citation.title 'Solution structure of the chromo domain of Mortality factor 4-like protein 1 from human' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, H.' 1 ? primary 'Sato, M.' 2 ? primary 'Tochio, N.' 3 ? primary 'Tomizawa, T.' 4 ? primary 'Koshiba, S.' 5 ? primary 'Harada, T.' 6 ? primary 'Watanabe, S.' 7 ? primary 'Kigawa, T.' 8 ? primary 'Yokoyama, S.' 9 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Mortality factor 4-like protein 1' _entity.formula_weight 11524.102 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'Chromo domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'MORF-related gene 15 protein, Transcription factor-like protein MRG15, MSL3-1 protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGMAPKQDPKPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPESRVLKYVDTNLQKQ RELQKANQEQYAEGKMRGAA ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGMAPKQDPKPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPESRVLKYVDTNLQKQ RELQKANQEQYAEGKMRGAA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hso002001486.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 MET n 1 9 ALA n 1 10 PRO n 1 11 LYS n 1 12 GLN n 1 13 ASP n 1 14 PRO n 1 15 LYS n 1 16 PRO n 1 17 LYS n 1 18 PHE n 1 19 GLN n 1 20 GLU n 1 21 GLY n 1 22 GLU n 1 23 ARG n 1 24 VAL n 1 25 LEU n 1 26 CYS n 1 27 PHE n 1 28 HIS n 1 29 GLY n 1 30 PRO n 1 31 LEU n 1 32 LEU n 1 33 TYR n 1 34 GLU n 1 35 ALA n 1 36 LYS n 1 37 CYS n 1 38 VAL n 1 39 LYS n 1 40 VAL n 1 41 ALA n 1 42 ILE n 1 43 LYS n 1 44 ASP n 1 45 LYS n 1 46 GLN n 1 47 VAL n 1 48 LYS n 1 49 TYR n 1 50 PHE n 1 51 ILE n 1 52 HIS n 1 53 TYR n 1 54 SER n 1 55 GLY n 1 56 TRP n 1 57 ASN n 1 58 LYS n 1 59 ASN n 1 60 TRP n 1 61 ASP n 1 62 GLU n 1 63 TRP n 1 64 VAL n 1 65 PRO n 1 66 GLU n 1 67 SER n 1 68 ARG n 1 69 VAL n 1 70 LEU n 1 71 LYS n 1 72 TYR n 1 73 VAL n 1 74 ASP n 1 75 THR n 1 76 ASN n 1 77 LEU n 1 78 GLN n 1 79 LYS n 1 80 GLN n 1 81 ARG n 1 82 GLU n 1 83 LEU n 1 84 GLN n 1 85 LYS n 1 86 ALA n 1 87 ASN n 1 88 GLN n 1 89 GLU n 1 90 GLN n 1 91 TYR n 1 92 ALA n 1 93 GLU n 1 94 GLY n 1 95 LYS n 1 96 MET n 1 97 ARG n 1 98 GLY n 1 99 ALA n 1 100 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene MORF4L1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P060522-07 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MO4L1_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAPKQDPKPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPESRVLKYVDTNLQKQRELQKAN QEQYAEGKMRGAA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession Q9UBU8 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2EFI _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 100 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9UBU8 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 93 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 100 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2EFI GLY A 1 ? UNP Q9UBU8 ? ? 'expression tag' 1 1 1 2EFI SER A 2 ? UNP Q9UBU8 ? ? 'expression tag' 2 2 1 2EFI SER A 3 ? UNP Q9UBU8 ? ? 'expression tag' 3 3 1 2EFI GLY A 4 ? UNP Q9UBU8 ? ? 'expression tag' 4 4 1 2EFI SER A 5 ? UNP Q9UBU8 ? ? 'expression tag' 5 5 1 2EFI SER A 6 ? UNP Q9UBU8 ? ? 'expression tag' 6 6 1 2EFI GLY A 7 ? UNP Q9UBU8 ? ? 'expression tag' 7 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_13C-separated_NOESY 1 2 1 3D_15N-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 296 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.13mM Chromo domain U-15N, 13C; 20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2EFI _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2EFI _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2EFI _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20030801 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9827 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2EFI _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2EFI _struct.title 'Solution structure of the chromo domain of Mortality factor 4-like protein 1 from human' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2EFI _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text ;Chromo domain, Mortality factor 4-like protein 1, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSCRIPTION ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 74 ? ALA A 86 ? ASP A 74 ALA A 86 1 ? 13 HELX_P HELX_P2 2 GLN A 88 ? ALA A 92 ? GLN A 88 ALA A 92 1 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 69 ? LEU A 70 ? VAL A 69 LEU A 70 A 2 ARG A 23 ? PHE A 27 ? ARG A 23 PHE A 27 A 3 LEU A 32 ? LYS A 43 ? LEU A 32 LYS A 43 A 4 GLN A 46 ? TYR A 53 ? GLN A 46 TYR A 53 A 5 GLU A 62 ? VAL A 64 ? GLU A 62 VAL A 64 # _database_PDB_matrix.entry_id 2EFI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2EFI _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 MET 8 8 8 MET MET A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 ASP 13 13 13 ASP ASP A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 PHE 18 18 18 PHE PHE A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 CYS 26 26 26 CYS CYS A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 HIS 28 28 28 HIS HIS A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 PRO 30 30 30 PRO PRO A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 TYR 33 33 33 TYR TYR A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 CYS 37 37 37 CYS CYS A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 GLN 46 46 46 GLN GLN A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 TYR 49 49 49 TYR TYR A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 HIS 52 52 52 HIS HIS A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 TRP 56 56 56 TRP TRP A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 TRP 60 60 60 TRP TRP A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 TRP 63 63 63 TRP TRP A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 TYR 72 72 72 TYR TYR A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 GLN 78 78 78 GLN GLN A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 GLN 80 80 80 GLN GLN A . n A 1 81 ARG 81 81 81 ARG ARG A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 GLN 88 88 88 GLN GLN A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 LYS 95 95 95 LYS LYS A . n A 1 96 MET 96 96 96 MET MET A . n A 1 97 ARG 97 97 97 ARG ARG A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 ALA 100 100 100 ALA ALA A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-08-28 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' 5 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 650 ;HELIX Determination method: Author determined ; 700 ;SHEET Determination method: Author determined ; 999 ;SEQUENCE The sequence database is Q9UBU8-2, Isoform 2 of Q9UBU8. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 10 ? ? -69.78 -171.04 2 1 LYS A 11 ? ? -90.59 52.66 3 1 ASP A 13 ? ? -39.10 149.13 4 1 PRO A 30 ? ? -69.69 2.94 5 1 ASP A 61 ? ? -34.54 150.46 6 1 PRO A 65 ? ? -69.71 -165.95 7 1 GLN A 80 ? ? -33.39 -35.53 8 1 ARG A 97 ? ? -51.98 179.39 9 2 PRO A 10 ? ? -69.78 -178.16 10 2 ASP A 13 ? ? -42.58 153.33 11 2 PRO A 30 ? ? -69.76 3.28 12 2 TYR A 53 ? ? -54.92 106.28 13 2 SER A 54 ? ? -42.94 106.08 14 2 ASP A 61 ? ? -40.82 108.67 15 2 PRO A 65 ? ? -69.75 -170.30 16 2 GLN A 80 ? ? -33.14 -35.20 17 3 LYS A 11 ? ? -119.51 54.98 18 3 PRO A 30 ? ? -69.80 3.37 19 3 TYR A 53 ? ? -52.96 103.14 20 3 SER A 54 ? ? -34.50 134.74 21 3 PRO A 65 ? ? -69.79 -177.06 22 3 GLN A 80 ? ? -36.31 -32.89 23 4 PRO A 14 ? ? -69.72 -174.26 24 4 PRO A 30 ? ? -69.77 3.39 25 4 TYR A 53 ? ? -52.77 105.35 26 4 SER A 54 ? ? -40.40 105.32 27 4 LYS A 58 ? ? -107.10 41.86 28 4 ASP A 61 ? ? -37.36 106.94 29 4 PRO A 65 ? ? -69.72 -171.00 30 4 LYS A 79 ? ? -97.43 -60.58 31 4 GLN A 80 ? ? -33.76 -38.05 32 4 ALA A 92 ? ? -56.57 -71.26 33 4 GLU A 93 ? ? 40.38 27.90 34 5 GLN A 12 ? ? -77.53 47.81 35 5 HIS A 28 ? ? -106.75 41.72 36 5 PRO A 30 ? ? -69.79 3.15 37 5 PHE A 50 ? ? -69.15 99.31 38 5 TYR A 53 ? ? -56.30 103.25 39 5 SER A 54 ? ? -38.79 116.43 40 5 ASN A 57 ? ? -35.62 -39.19 41 5 LYS A 79 ? ? -93.33 -62.21 42 5 GLN A 80 ? ? -33.60 -34.36 43 5 GLU A 93 ? ? -42.52 102.68 44 6 PRO A 30 ? ? -69.84 3.36 45 6 ASP A 44 ? ? 46.45 27.97 46 6 ASN A 57 ? ? -48.53 174.95 47 6 PRO A 65 ? ? -69.79 -170.79 48 6 LYS A 79 ? ? -93.50 -65.30 49 6 GLN A 80 ? ? -36.35 -32.88 50 7 SER A 3 ? ? -37.87 129.54 51 7 PRO A 10 ? ? -69.80 -177.09 52 7 GLN A 12 ? ? -82.07 41.62 53 7 PRO A 14 ? ? -69.78 -178.53 54 7 PRO A 30 ? ? -69.76 3.26 55 7 PHE A 50 ? ? -64.06 98.41 56 7 TYR A 53 ? ? -57.51 107.82 57 7 TRP A 56 ? ? -98.89 45.63 58 7 ASP A 61 ? ? -36.68 124.06 59 7 PRO A 65 ? ? -69.78 -168.35 60 7 GLN A 78 ? ? -38.35 -26.95 61 7 LYS A 79 ? ? -93.12 -67.02 62 7 GLN A 80 ? ? -33.85 -34.54 63 7 GLU A 93 ? ? -38.20 -31.38 64 7 MET A 96 ? ? -93.45 42.53 65 8 PRO A 10 ? ? -69.75 99.65 66 8 ASP A 13 ? ? -170.69 148.96 67 8 PRO A 30 ? ? -69.78 2.93 68 8 TYR A 53 ? ? -53.68 108.85 69 8 SER A 54 ? ? -52.91 96.06 70 8 ASP A 61 ? ? -45.49 170.88 71 8 PRO A 65 ? ? -69.75 -167.61 72 8 LYS A 79 ? ? -93.39 -60.47 73 8 GLN A 80 ? ? -33.21 -37.74 74 8 LYS A 95 ? ? -49.43 166.17 75 9 SER A 6 ? ? -38.24 147.78 76 9 PRO A 30 ? ? -69.69 3.58 77 9 TYR A 53 ? ? -56.13 109.02 78 9 SER A 54 ? ? -34.55 144.57 79 9 LYS A 58 ? ? -34.49 107.46 80 9 PRO A 65 ? ? -69.77 -173.05 81 9 LYS A 79 ? ? -91.53 -60.06 82 9 GLN A 80 ? ? -33.77 -37.00 83 9 GLU A 93 ? ? -37.09 -37.91 84 10 LYS A 11 ? ? -38.56 141.93 85 10 ASP A 13 ? ? -38.88 151.48 86 10 PRO A 30 ? ? -69.77 3.74 87 10 TYR A 53 ? ? -55.34 105.09 88 10 SER A 54 ? ? -34.44 109.23 89 10 LYS A 58 ? ? -32.48 99.56 90 10 ASP A 61 ? ? -40.82 105.59 91 10 GLN A 78 ? ? -38.44 -27.43 92 10 LYS A 79 ? ? -92.34 -64.19 93 10 MET A 96 ? ? -104.86 41.34 94 11 PRO A 30 ? ? -69.76 3.27 95 11 PHE A 50 ? ? -67.38 99.47 96 11 ASN A 57 ? ? -48.95 92.61 97 11 ASN A 59 ? ? 46.83 26.39 98 11 ASP A 61 ? ? -35.68 152.25 99 11 PRO A 65 ? ? -69.69 -169.96 100 11 GLN A 80 ? ? -35.12 -35.27 101 12 SER A 3 ? ? -171.20 132.04 102 12 PRO A 30 ? ? -69.73 3.43 103 12 ASN A 57 ? ? -55.97 177.19 104 12 LYS A 58 ? ? -69.56 81.82 105 12 ASN A 59 ? ? -123.45 -55.93 106 12 TRP A 60 ? ? -98.15 36.95 107 12 PRO A 65 ? ? -69.78 -167.27 108 12 GLN A 80 ? ? -33.33 -38.60 109 12 ALA A 92 ? ? -55.84 -71.76 110 12 GLU A 93 ? ? 36.02 40.49 111 13 GLN A 12 ? ? -68.08 76.28 112 13 PRO A 30 ? ? -69.82 1.59 113 13 SER A 54 ? ? -34.36 129.77 114 13 LYS A 58 ? ? -46.99 103.12 115 13 ASP A 61 ? ? -34.93 143.84 116 13 PRO A 65 ? ? -69.75 -177.05 117 13 LYS A 79 ? ? -94.31 -63.89 118 13 GLN A 80 ? ? -33.92 -33.62 119 14 LYS A 11 ? ? -84.22 41.25 120 14 PRO A 30 ? ? -69.79 3.93 121 14 PHE A 50 ? ? -58.90 105.21 122 14 SER A 54 ? ? -49.73 107.24 123 14 LYS A 58 ? ? -103.42 40.02 124 14 PRO A 65 ? ? -69.75 -179.03 125 14 LYS A 79 ? ? -93.49 -63.37 126 14 GLN A 80 ? ? -33.67 -36.12 127 14 GLU A 93 ? ? -36.11 113.79 128 14 ALA A 99 ? ? -170.15 127.68 129 15 SER A 2 ? ? -132.71 -48.86 130 15 SER A 3 ? ? 36.85 42.32 131 15 PRO A 30 ? ? -69.78 3.37 132 15 TYR A 53 ? ? -54.32 106.55 133 15 SER A 54 ? ? -38.78 139.35 134 15 PRO A 65 ? ? -69.70 -167.45 135 15 GLN A 80 ? ? -36.22 -33.91 136 15 GLU A 93 ? ? -36.18 143.40 137 16 ASP A 13 ? ? -41.19 152.18 138 16 PRO A 30 ? ? -69.76 3.57 139 16 TYR A 53 ? ? -54.79 108.87 140 16 SER A 54 ? ? -35.37 109.66 141 16 LYS A 58 ? ? 38.72 32.91 142 16 PRO A 65 ? ? -69.77 -164.11 143 16 LYS A 79 ? ? -95.09 -62.24 144 16 GLN A 80 ? ? -38.85 -31.23 145 16 ALA A 92 ? ? -59.58 -70.65 146 17 SER A 5 ? ? -129.59 -53.14 147 17 PRO A 10 ? ? -69.77 -177.08 148 17 LYS A 11 ? ? -84.14 36.71 149 17 PRO A 30 ? ? -69.81 3.13 150 17 TYR A 53 ? ? -53.50 106.43 151 17 TRP A 56 ? ? 37.20 40.91 152 17 LYS A 58 ? ? -97.38 38.76 153 17 TRP A 60 ? ? -93.34 30.16 154 17 PRO A 65 ? ? -69.80 -167.77 155 17 GLN A 80 ? ? -33.05 -36.43 156 18 SER A 5 ? ? -40.90 105.30 157 18 SER A 6 ? ? -104.36 42.26 158 18 MET A 8 ? ? -129.45 -50.61 159 18 LYS A 11 ? ? -87.45 49.45 160 18 PRO A 30 ? ? -69.76 3.54 161 18 PHE A 50 ? ? -62.59 98.61 162 18 ASN A 57 ? ? -60.29 77.34 163 18 TRP A 60 ? ? -37.62 -36.44 164 18 ASP A 61 ? ? -38.06 128.05 165 18 PRO A 65 ? ? -69.74 -164.62 166 18 GLN A 80 ? ? -33.61 -37.84 167 18 GLN A 90 ? ? -38.91 -38.40 168 18 ALA A 92 ? ? -51.20 -73.03 169 18 GLU A 93 ? ? 36.54 44.11 170 18 ARG A 97 ? ? 34.41 45.01 171 19 SER A 5 ? ? -171.91 148.08 172 19 PRO A 10 ? ? -69.79 -167.66 173 19 PRO A 30 ? ? -69.75 3.29 174 19 CYS A 37 ? ? -64.10 99.16 175 19 TYR A 53 ? ? -57.03 109.47 176 19 SER A 54 ? ? -34.42 105.84 177 19 LYS A 58 ? ? 34.32 33.19 178 19 PRO A 65 ? ? -69.77 -165.35 179 19 ALA A 99 ? ? -45.38 109.99 180 20 SER A 3 ? ? -37.27 124.34 181 20 MET A 8 ? ? -126.99 -56.58 182 20 ALA A 9 ? ? -163.53 116.72 183 20 PRO A 30 ? ? -69.71 2.96 184 20 PHE A 50 ? ? -58.96 101.92 185 20 TYR A 53 ? ? -55.01 108.22 186 20 LYS A 58 ? ? -106.20 42.77 187 20 ASP A 61 ? ? -36.16 122.62 188 20 PRO A 65 ? ? -69.80 -172.64 189 20 LYS A 79 ? ? -96.74 -61.29 190 20 GLN A 80 ? ? -33.66 -34.20 191 20 ALA A 92 ? ? -55.80 -71.85 192 20 LYS A 95 ? ? -175.03 145.63 193 20 MET A 96 ? ? -105.34 -66.83 #