HEADER OXIDOREDUCTASE 01-MAR-07 2EGH TITLE CRYSTAL STRUCTURE OF 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE TITLE 2 COMPLEXED WITH A MAGNESIUM ION, NADPH AND FOSMIDOMYCIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DXP REDUCTOISOMERASE, 1-DEOXYXYLULOSE-5-PHOSPHATE COMPND 5 REDUCTOISOMERASE, 2-C- METHYL-D-ERYTHRITOL 4-PHOSPHATE SYNTHASE; COMPND 6 EC: 1.1.1.267; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI STR. K12 SUBSTR.; SOURCE 3 ORGANISM_TAXID: 316407; SOURCE 4 STRAIN: W3110; SOURCE 5 GENE: DXR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: M15; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE30 KEYWDS PROTEIN-INHIBITOR COMPLEX, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.YAJIMA,K.HARA,D.IINO,Y.SASAKI,T.KUZUYAMA,H.SETO REVDAT 4 25-OCT-23 2EGH 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 2EGH 1 VERSN REVDAT 2 24-FEB-09 2EGH 1 VERSN REVDAT 1 19-JUN-07 2EGH 0 JRNL AUTH S.YAJIMA,K.HARA,D.IINO,Y.SASAKI,T.KUZUYAMA,K.OHSAWA,H.SETO JRNL TITL STRUCTURE OF 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE JRNL TITL 2 IN A QUATERNARY COMPLEX WITH A MAGNESIUM ION, NADPH AND THE JRNL TITL 3 ANTIMALARIAL DRUG FOSMIDOMYCIN JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 63 466 2007 JRNL REFN ESSN 1744-3091 JRNL PMID 17554164 JRNL DOI 10.1107/S1744309107024475 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 88254 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 4407 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.34 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2870 REMARK 3 BIN FREE R VALUE : 0.2900 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 764 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6061 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 120 REMARK 3 SOLVENT ATOMS : 301 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.33000 REMARK 3 B22 (A**2) : 0.14000 REMARK 3 B33 (A**2) : -5.48000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.28 REMARK 3 ESD FROM SIGMAA (A) : 0.29 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.28 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.900 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.190 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE FILE CONTAINS FRIEDEL PAIRS. REMARK 4 REMARK 4 2EGH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-MAR-07. REMARK 100 THE DEPOSITION ID IS D_1000026634. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-MAR-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : TRIANGULAR SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 90406 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.10400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.68200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1JVS REMARK 200 REMARK 200 REMARK: THE FILE CONTAINS FRIEDEL PAIRS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CITRATE, 1M AMMONIUM REMARK 280 SULFATE, 0.01M NA-K TARTERATE, 4.17MM DTT, 1MM MGCL2, 6.25MM REMARK 280 NADPH, PH 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 90.29500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.55750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 90.29500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.55750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER IN THE ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -10 REMARK 465 ARG A -9 REMARK 465 GLY A -8 REMARK 465 SER A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 CYS A 400 REMARK 465 ASP A 401 REMARK 465 LEU A 402 REMARK 465 GLY A 403 REMARK 465 THR A 404 REMARK 465 PRO A 405 REMARK 465 GLY A 406 REMARK 465 ARG A 407 REMARK 465 PRO A 408 REMARK 465 ALA A 409 REMARK 465 ALA A 410 REMARK 465 LYS A 411 REMARK 465 LEU A 412 REMARK 465 ASN A 413 REMARK 465 MET B -10 REMARK 465 ARG B -9 REMARK 465 GLY B -8 REMARK 465 SER B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 SER B 398 REMARK 465 ALA B 399 REMARK 465 CYS B 400 REMARK 465 ASP B 401 REMARK 465 LEU B 402 REMARK 465 GLY B 403 REMARK 465 THR B 404 REMARK 465 PRO B 405 REMARK 465 GLY B 406 REMARK 465 ARG B 407 REMARK 465 PRO B 408 REMARK 465 ALA B 409 REMARK 465 ALA B 410 REMARK 465 LYS B 411 REMARK 465 LEU B 412 REMARK 465 ASN B 413 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 37 82.64 -63.03 REMARK 500 ASN A 210 -99.03 -50.73 REMARK 500 SER A 212 71.41 -107.39 REMARK 500 SER A 257 168.27 155.50 REMARK 500 TRP A 285 134.25 -36.31 REMARK 500 SER A 397 -80.57 -84.49 REMARK 500 SER B 126 -70.61 -49.01 REMARK 500 HIS B 208 124.61 -172.00 REMARK 500 ASN B 210 -127.79 -58.14 REMARK 500 SER B 257 166.59 157.49 REMARK 500 TRP B 285 134.07 -36.54 REMARK 500 MET B 366 -81.67 -70.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 900 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 149 OD1 REMARK 620 2 GLU A 151 OE2 91.8 REMARK 620 3 GLU A 230 OE2 101.2 65.7 REMARK 620 4 FOM A1001 O1 92.9 77.8 141.1 REMARK 620 5 FOM A1001 O2 161.9 74.6 84.3 72.9 REMARK 620 6 FOM A1001 N1 142.1 78.5 107.6 49.4 24.4 REMARK 620 7 HOH A3151 O 109.7 156.4 117.1 91.1 82.3 78.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 901 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 149 OD1 REMARK 620 2 GLU B 151 OE2 91.0 REMARK 620 3 GLU B 230 OE1 93.1 85.1 REMARK 620 4 FOM B2001 O2 179.4 88.8 87.5 REMARK 620 5 FOM B2001 N1 151.4 85.8 114.9 28.0 REMARK 620 6 FOM B2001 O1 95.1 86.3 168.2 84.3 56.3 REMARK 620 7 HOH B3153 O 96.4 171.6 90.6 83.8 89.6 96.9 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FOM A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FOM B 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 3001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP B 3002 DBREF 2EGH A 1 397 UNP P45568 DXR_ECOLI 2 398 DBREF 2EGH B 1 397 UNP P45568 DXR_ECOLI 2 398 SEQADV 2EGH MET A -10 UNP P45568 CLONING ARTIFACT SEQADV 2EGH ARG A -9 UNP P45568 CLONING ARTIFACT SEQADV 2EGH GLY A -8 UNP P45568 CLONING ARTIFACT SEQADV 2EGH SER A -7 UNP P45568 CLONING ARTIFACT SEQADV 2EGH HIS A -6 UNP P45568 CLONING ARTIFACT SEQADV 2EGH HIS A -5 UNP P45568 CLONING ARTIFACT SEQADV 2EGH HIS A -4 UNP P45568 CLONING ARTIFACT SEQADV 2EGH HIS A -3 UNP P45568 CLONING ARTIFACT SEQADV 2EGH HIS A -2 UNP P45568 CLONING ARTIFACT SEQADV 2EGH HIS A -1 UNP P45568 CLONING ARTIFACT SEQADV 2EGH GLY A 0 UNP P45568 CLONING ARTIFACT SEQADV 2EGH SER A 398 UNP P45568 CLONING ARTIFACT SEQADV 2EGH ALA A 399 UNP P45568 CLONING ARTIFACT SEQADV 2EGH CYS A 400 UNP P45568 CLONING ARTIFACT SEQADV 2EGH ASP A 401 UNP P45568 CLONING ARTIFACT SEQADV 2EGH LEU A 402 UNP P45568 CLONING ARTIFACT SEQADV 2EGH GLY A 403 UNP P45568 CLONING ARTIFACT SEQADV 2EGH THR A 404 UNP P45568 CLONING ARTIFACT SEQADV 2EGH PRO A 405 UNP P45568 CLONING ARTIFACT SEQADV 2EGH GLY A 406 UNP P45568 CLONING ARTIFACT SEQADV 2EGH ARG A 407 UNP P45568 CLONING ARTIFACT SEQADV 2EGH PRO A 408 UNP P45568 CLONING ARTIFACT SEQADV 2EGH ALA A 409 UNP P45568 CLONING ARTIFACT SEQADV 2EGH ALA A 410 UNP P45568 CLONING ARTIFACT SEQADV 2EGH LYS A 411 UNP P45568 CLONING ARTIFACT SEQADV 2EGH LEU A 412 UNP P45568 CLONING ARTIFACT SEQADV 2EGH ASN A 413 UNP P45568 CLONING ARTIFACT SEQADV 2EGH MET B -10 UNP P45568 CLONING ARTIFACT SEQADV 2EGH ARG B -9 UNP P45568 CLONING ARTIFACT SEQADV 2EGH GLY B -8 UNP P45568 CLONING ARTIFACT SEQADV 2EGH SER B -7 UNP P45568 CLONING ARTIFACT SEQADV 2EGH HIS B -6 UNP P45568 CLONING ARTIFACT SEQADV 2EGH HIS B -5 UNP P45568 CLONING ARTIFACT SEQADV 2EGH HIS B -4 UNP P45568 CLONING ARTIFACT SEQADV 2EGH HIS B -3 UNP P45568 CLONING ARTIFACT SEQADV 2EGH HIS B -2 UNP P45568 CLONING ARTIFACT SEQADV 2EGH HIS B -1 UNP P45568 CLONING ARTIFACT SEQADV 2EGH GLY B 0 UNP P45568 CLONING ARTIFACT SEQADV 2EGH SER B 398 UNP P45568 CLONING ARTIFACT SEQADV 2EGH ALA B 399 UNP P45568 CLONING ARTIFACT SEQADV 2EGH CYS B 400 UNP P45568 CLONING ARTIFACT SEQADV 2EGH ASP B 401 UNP P45568 CLONING ARTIFACT SEQADV 2EGH LEU B 402 UNP P45568 CLONING ARTIFACT SEQADV 2EGH GLY B 403 UNP P45568 CLONING ARTIFACT SEQADV 2EGH THR B 404 UNP P45568 CLONING ARTIFACT SEQADV 2EGH PRO B 405 UNP P45568 CLONING ARTIFACT SEQADV 2EGH GLY B 406 UNP P45568 CLONING ARTIFACT SEQADV 2EGH ARG B 407 UNP P45568 CLONING ARTIFACT SEQADV 2EGH PRO B 408 UNP P45568 CLONING ARTIFACT SEQADV 2EGH ALA B 409 UNP P45568 CLONING ARTIFACT SEQADV 2EGH ALA B 410 UNP P45568 CLONING ARTIFACT SEQADV 2EGH LYS B 411 UNP P45568 CLONING ARTIFACT SEQADV 2EGH LEU B 412 UNP P45568 CLONING ARTIFACT SEQADV 2EGH ASN B 413 UNP P45568 CLONING ARTIFACT SEQRES 1 A 424 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY LYS GLN SEQRES 2 A 424 LEU THR ILE LEU GLY SER THR GLY SER ILE GLY CYS SER SEQRES 3 A 424 THR LEU ASP VAL VAL ARG HIS ASN PRO GLU HIS PHE ARG SEQRES 4 A 424 VAL VAL ALA LEU VAL ALA GLY LYS ASN VAL THR ARG MET SEQRES 5 A 424 VAL GLU GLN CYS LEU GLU PHE SER PRO ARG TYR ALA VAL SEQRES 6 A 424 MET ASP ASP GLU ALA SER ALA LYS LEU LEU LYS THR MET SEQRES 7 A 424 LEU GLN GLN GLN GLY SER ARG THR GLU VAL LEU SER GLY SEQRES 8 A 424 GLN GLN ALA ALA CYS ASP MET ALA ALA LEU GLU ASP VAL SEQRES 9 A 424 ASP GLN VAL MET ALA ALA ILE VAL GLY ALA ALA GLY LEU SEQRES 10 A 424 LEU PRO THR LEU ALA ALA ILE ARG ALA GLY LYS THR ILE SEQRES 11 A 424 LEU LEU ALA ASN LYS GLU SER LEU VAL THR CYS GLY ARG SEQRES 12 A 424 LEU PHE MET ASP ALA VAL LYS GLN SER LYS ALA GLN LEU SEQRES 13 A 424 LEU PRO VAL ASP SER GLU HIS ASN ALA ILE PHE GLN SER SEQRES 14 A 424 LEU PRO GLN PRO ILE GLN HIS ASN LEU GLY TYR ALA ASP SEQRES 15 A 424 LEU GLU GLN ASN GLY VAL VAL SER ILE LEU LEU THR GLY SEQRES 16 A 424 SER GLY GLY PRO PHE ARG GLU THR PRO LEU ARG ASP LEU SEQRES 17 A 424 ALA THR MET THR PRO ASP GLN ALA CYS ARG HIS PRO ASN SEQRES 18 A 424 TRP SER MET GLY ARG LYS ILE SER VAL ASP SER ALA THR SEQRES 19 A 424 MET MET ASN LYS GLY LEU GLU TYR ILE GLU ALA ARG TRP SEQRES 20 A 424 LEU PHE ASN ALA SER ALA SER GLN MET GLU VAL LEU ILE SEQRES 21 A 424 HIS PRO GLN SER VAL ILE HIS SER MET VAL ARG TYR GLN SEQRES 22 A 424 ASP GLY SER VAL LEU ALA GLN LEU GLY GLU PRO ASP MET SEQRES 23 A 424 ARG THR PRO ILE ALA HIS THR MET ALA TRP PRO ASN ARG SEQRES 24 A 424 VAL ASN SER GLY VAL LYS PRO LEU ASP PHE CYS LYS LEU SEQRES 25 A 424 SER ALA LEU THR PHE ALA ALA PRO ASP TYR ASP ARG TYR SEQRES 26 A 424 PRO CYS LEU LYS LEU ALA MET GLU ALA PHE GLU GLN GLY SEQRES 27 A 424 GLN ALA ALA THR THR ALA LEU ASN ALA ALA ASN GLU ILE SEQRES 28 A 424 THR VAL ALA ALA PHE LEU ALA GLN GLN ILE ARG PHE THR SEQRES 29 A 424 ASP ILE ALA ALA LEU ASN LEU SER VAL LEU GLU LYS MET SEQRES 30 A 424 ASP MET ARG GLU PRO GLN CYS VAL ASP ASP VAL LEU SER SEQRES 31 A 424 VAL ASP ALA ASN ALA ARG GLU VAL ALA ARG LYS GLU VAL SEQRES 32 A 424 MET ARG LEU ALA SER SER ALA CYS ASP LEU GLY THR PRO SEQRES 33 A 424 GLY ARG PRO ALA ALA LYS LEU ASN SEQRES 1 B 424 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY LYS GLN SEQRES 2 B 424 LEU THR ILE LEU GLY SER THR GLY SER ILE GLY CYS SER SEQRES 3 B 424 THR LEU ASP VAL VAL ARG HIS ASN PRO GLU HIS PHE ARG SEQRES 4 B 424 VAL VAL ALA LEU VAL ALA GLY LYS ASN VAL THR ARG MET SEQRES 5 B 424 VAL GLU GLN CYS LEU GLU PHE SER PRO ARG TYR ALA VAL SEQRES 6 B 424 MET ASP ASP GLU ALA SER ALA LYS LEU LEU LYS THR MET SEQRES 7 B 424 LEU GLN GLN GLN GLY SER ARG THR GLU VAL LEU SER GLY SEQRES 8 B 424 GLN GLN ALA ALA CYS ASP MET ALA ALA LEU GLU ASP VAL SEQRES 9 B 424 ASP GLN VAL MET ALA ALA ILE VAL GLY ALA ALA GLY LEU SEQRES 10 B 424 LEU PRO THR LEU ALA ALA ILE ARG ALA GLY LYS THR ILE SEQRES 11 B 424 LEU LEU ALA ASN LYS GLU SER LEU VAL THR CYS GLY ARG SEQRES 12 B 424 LEU PHE MET ASP ALA VAL LYS GLN SER LYS ALA GLN LEU SEQRES 13 B 424 LEU PRO VAL ASP SER GLU HIS ASN ALA ILE PHE GLN SER SEQRES 14 B 424 LEU PRO GLN PRO ILE GLN HIS ASN LEU GLY TYR ALA ASP SEQRES 15 B 424 LEU GLU GLN ASN GLY VAL VAL SER ILE LEU LEU THR GLY SEQRES 16 B 424 SER GLY GLY PRO PHE ARG GLU THR PRO LEU ARG ASP LEU SEQRES 17 B 424 ALA THR MET THR PRO ASP GLN ALA CYS ARG HIS PRO ASN SEQRES 18 B 424 TRP SER MET GLY ARG LYS ILE SER VAL ASP SER ALA THR SEQRES 19 B 424 MET MET ASN LYS GLY LEU GLU TYR ILE GLU ALA ARG TRP SEQRES 20 B 424 LEU PHE ASN ALA SER ALA SER GLN MET GLU VAL LEU ILE SEQRES 21 B 424 HIS PRO GLN SER VAL ILE HIS SER MET VAL ARG TYR GLN SEQRES 22 B 424 ASP GLY SER VAL LEU ALA GLN LEU GLY GLU PRO ASP MET SEQRES 23 B 424 ARG THR PRO ILE ALA HIS THR MET ALA TRP PRO ASN ARG SEQRES 24 B 424 VAL ASN SER GLY VAL LYS PRO LEU ASP PHE CYS LYS LEU SEQRES 25 B 424 SER ALA LEU THR PHE ALA ALA PRO ASP TYR ASP ARG TYR SEQRES 26 B 424 PRO CYS LEU LYS LEU ALA MET GLU ALA PHE GLU GLN GLY SEQRES 27 B 424 GLN ALA ALA THR THR ALA LEU ASN ALA ALA ASN GLU ILE SEQRES 28 B 424 THR VAL ALA ALA PHE LEU ALA GLN GLN ILE ARG PHE THR SEQRES 29 B 424 ASP ILE ALA ALA LEU ASN LEU SER VAL LEU GLU LYS MET SEQRES 30 B 424 ASP MET ARG GLU PRO GLN CYS VAL ASP ASP VAL LEU SER SEQRES 31 B 424 VAL ASP ALA ASN ALA ARG GLU VAL ALA ARG LYS GLU VAL SEQRES 32 B 424 MET ARG LEU ALA SER SER ALA CYS ASP LEU GLY THR PRO SEQRES 33 B 424 GLY ARG PRO ALA ALA LYS LEU ASN HET MG A 900 1 HET FOM A1001 11 HET NDP A3001 48 HET MG B 901 1 HET FOM B2001 11 HET NDP B3002 48 HETNAM MG MAGNESIUM ION HETNAM FOM 3-[FORMYL(HYDROXY)AMINO]PROPYLPHOSPHONIC ACID HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE HETSYN FOM FOSMIDOMYCIN FORMUL 3 MG 2(MG 2+) FORMUL 4 FOM 2(C4 H10 N O5 P) FORMUL 5 NDP 2(C21 H30 N7 O17 P3) FORMUL 9 HOH *301(H2 O) HELIX 1 1 GLY A 10 ASN A 23 1 14 HELIX 2 2 ASN A 37 SER A 49 1 13 HELIX 3 3 ASP A 57 GLN A 71 1 15 HELIX 4 4 GLY A 80 ALA A 89 1 10 HELIX 5 5 GLY A 105 ALA A 115 1 11 HELIX 6 6 LYS A 124 LYS A 142 1 19 HELIX 7 7 ASP A 149 SER A 158 1 10 HELIX 8 8 PRO A 160 HIS A 165 1 6 HELIX 9 9 LEU A 172 ASN A 175 5 4 HELIX 10 10 PRO A 193 MET A 200 5 8 HELIX 11 11 THR A 201 CYS A 206 1 6 HELIX 12 12 GLY A 214 THR A 223 1 10 HELIX 13 13 MET A 224 ASN A 239 1 16 HELIX 14 14 SER A 241 SER A 243 5 3 HELIX 15 15 MET A 275 TRP A 285 1 11 HELIX 16 16 ASP A 297 LEU A 301 5 5 HELIX 17 17 TYR A 314 GLY A 327 1 14 HELIX 18 18 GLY A 327 ALA A 347 1 21 HELIX 19 19 THR A 353 MET A 366 1 14 HELIX 20 20 CYS A 373 SER A 398 1 26 HELIX 21 21 GLY B 10 ASN B 23 1 14 HELIX 22 22 ASN B 37 SER B 49 1 13 HELIX 23 23 ASP B 57 GLN B 71 1 15 HELIX 24 24 GLY B 80 LEU B 90 1 11 HELIX 25 25 GLY B 102 ALA B 104 5 3 HELIX 26 26 GLY B 105 ALA B 115 1 11 HELIX 27 27 LYS B 124 LYS B 142 1 19 HELIX 28 28 ASP B 149 SER B 158 1 10 HELIX 29 29 PRO B 160 HIS B 165 1 6 HELIX 30 30 LEU B 172 ASN B 175 5 4 HELIX 31 31 PRO B 193 MET B 200 5 8 HELIX 32 32 THR B 201 CYS B 206 1 6 HELIX 33 33 GLY B 214 THR B 223 1 10 HELIX 34 34 MET B 224 PHE B 238 1 15 HELIX 35 35 SER B 241 SER B 243 5 3 HELIX 36 36 MET B 275 TRP B 285 1 11 HELIX 37 37 ASP B 297 LEU B 301 5 5 HELIX 38 38 TYR B 314 GLY B 327 1 14 HELIX 39 39 GLY B 327 ALA B 347 1 21 HELIX 40 40 THR B 353 ASP B 367 1 15 HELIX 41 41 CYS B 373 SER B 397 1 25 SHEET 1 A 7 GLU A 76 SER A 79 0 SHEET 2 A 7 TYR A 52 MET A 55 1 N ALA A 53 O LEU A 78 SHEET 3 A 7 PHE A 27 ALA A 34 1 N ALA A 34 O VAL A 54 SHEET 4 A 7 LYS A 1 LEU A 6 1 N ILE A 5 O ALA A 31 SHEET 5 A 7 GLN A 95 ALA A 98 1 O MET A 97 N LEU A 6 SHEET 6 A 7 THR A 118 LEU A 121 1 O LEU A 120 N ALA A 98 SHEET 7 A 7 GLN A 144 PRO A 147 1 O GLN A 144 N ILE A 119 SHEET 1 B 8 MET A 245 ILE A 249 0 SHEET 2 B 8 VAL A 177 GLY A 184 1 N LEU A 182 O LEU A 248 SHEET 3 B 8 ILE A 255 TYR A 261 -1 O ARG A 260 N VAL A 178 SHEET 4 B 8 VAL A 266 LEU A 270 -1 O GLN A 269 N HIS A 256 SHEET 5 B 8 VAL B 266 LEU B 270 -1 O VAL B 266 N LEU A 270 SHEET 6 B 8 ILE B 255 TYR B 261 -1 N HIS B 256 O GLN B 269 SHEET 7 B 8 VAL B 177 GLY B 184 -1 N LEU B 181 O MET B 258 SHEET 8 B 8 MET B 245 ILE B 249 1 O LEU B 248 N LEU B 182 SHEET 1 C 7 GLU B 76 SER B 79 0 SHEET 2 C 7 TYR B 52 MET B 55 1 N ALA B 53 O LEU B 78 SHEET 3 C 7 PHE B 27 ALA B 34 1 N ALA B 34 O VAL B 54 SHEET 4 C 7 LYS B 1 LEU B 6 1 N ILE B 5 O ALA B 31 SHEET 5 C 7 GLN B 95 ALA B 98 1 O MET B 97 N LEU B 6 SHEET 6 C 7 THR B 118 LEU B 121 1 O LEU B 120 N VAL B 96 SHEET 7 C 7 GLN B 144 PRO B 147 1 O GLN B 144 N ILE B 119 LINK OD1 ASP A 149 MG MG A 900 1555 1555 2.03 LINK OE2 GLU A 151 MG MG A 900 1555 1555 2.57 LINK OE2 GLU A 230 MG MG A 900 1555 1555 2.10 LINK MG MG A 900 O1 FOM A1001 1555 1555 2.42 LINK MG MG A 900 O2 FOM A1001 1555 1555 2.33 LINK MG MG A 900 N1 FOM A1001 1555 1555 3.00 LINK MG MG A 900 O HOH A3151 1555 1555 2.16 LINK OD1 ASP B 149 MG MG B 901 1555 1555 2.20 LINK OE2 GLU B 151 MG MG B 901 1555 1555 2.40 LINK OE1 GLU B 230 MG MG B 901 1555 1555 2.09 LINK MG MG B 901 O2 FOM B2001 1555 1555 2.12 LINK MG MG B 901 N1 FOM B2001 1555 1555 2.70 LINK MG MG B 901 O1 FOM B2001 1555 1555 2.06 LINK MG MG B 901 O HOH B3153 1555 1555 2.32 CISPEP 1 TRP A 285 PRO A 286 0 0.33 CISPEP 2 TRP B 285 PRO B 286 0 -0.19 SITE 1 AC1 6 LYS A 124 ASP A 149 GLU A 151 GLU A 230 SITE 2 AC1 6 FOM A1001 HOH A3151 SITE 1 AC2 5 ASP B 149 GLU B 151 GLU B 230 FOM B2001 SITE 2 AC2 5 HOH B3153 SITE 1 AC3 12 ASP A 149 SER A 150 GLU A 151 GLY A 184 SITE 2 AC3 12 SER A 185 SER A 221 ASN A 226 LYS A 227 SITE 3 AC3 12 GLU A 230 MG A 900 HOH A3029 HOH A3151 SITE 1 AC4 16 ASP B 149 SER B 150 GLU B 151 GLY B 184 SITE 2 AC4 16 SER B 185 TRP B 211 MET B 213 SER B 221 SITE 3 AC4 16 ASN B 226 LYS B 227 GLU B 230 MG B 901 SITE 4 AC4 16 HOH B3004 HOH B3021 HOH B3111 HOH B3153 SITE 1 AC5 20 GLY A 7 THR A 9 GLY A 10 SER A 11 SITE 2 AC5 20 ILE A 12 ALA A 34 GLY A 35 LYS A 36 SITE 3 AC5 20 ASN A 37 ASP A 56 ALA A 99 ILE A 100 SITE 4 AC5 20 VAL A 101 ALA A 104 ALA A 122 ASN A 123 SITE 5 AC5 20 LYS A 124 ASP A 149 MET A 275 HOH A3098 SITE 1 AC6 19 GLY B 7 THR B 9 GLY B 10 SER B 11 SITE 2 AC6 19 ILE B 12 ALA B 34 GLY B 35 LYS B 36 SITE 3 AC6 19 ASN B 37 ILE B 100 VAL B 101 ALA B 104 SITE 4 AC6 19 ALA B 122 ASN B 123 LYS B 124 ASP B 149 SITE 5 AC6 19 MET B 275 HOH B3012 HOH B3058 CRYST1 180.590 59.115 87.050 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005537 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016916 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011488 0.00000