HEADER LIGASE/PROTEIN BINDING 23-MAR-07 2EKE TITLE STRUCTURE OF A SUMO-BINDING-MOTIF MIMIC BOUND TO SMT3P-UBC9P: TITLE 2 CONSERVATION OF A NONCOVALENT UBIQUITIN-LIKE PROTEIN-E2 COMPLEX AS A TITLE 3 PLATFORM FOR SELECTIVE INTERACTIONS WITHIN A SUMO PATHWAY COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUMO-CONJUGATING ENZYME UBC9; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: UBIQUITIN-CONJUGATING ENZYME E2-18 KDA, UBIQUITIN-PROTEIN COMPND 5 LIGASE, UBIQUITIN CARRIER PROTEIN 9; COMPND 6 EC: 6.3.2.19; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: UBIQUITIN-LIKE PROTEIN SMT3; COMPND 10 CHAIN: C, D; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: UBC9; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PRSF-DUET; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 13 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 14 ORGANISM_TAXID: 4932; SOURCE 15 GENE: SMT3; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) GOLD; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PRSF-DUET KEYWDS UBC9, SMT3, SUMO BINDING MOTIF, SBM, LIGASE-PROTEIN BINDING COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.M.DUDA,B.A.SCHULMAN REVDAT 3 25-OCT-23 2EKE 1 SEQADV REVDAT 2 24-FEB-09 2EKE 1 VERSN REVDAT 1 29-MAY-07 2EKE 0 JRNL AUTH D.M.DUDA,R.C.A.M.VAN WAARDENBURG,L.A.BORG,S.MCGARITY, JRNL AUTH 2 A.NOURSE,M.B.WADDELL,M.A.BJORNSTI,B.A.SCHULMAN JRNL TITL STRUCTURE OF A SUMO-BINDING-MOTIF MIMIC BOUND TO JRNL TITL 2 SMT3P-UBC9P: CONSERVATION OF A NON-COVALENT UBIQUITIN-LIKE JRNL TITL 3 PROTEIN-E2 COMPLEX AS A PLATFORM FOR SELECTIVE INTERACTIONS JRNL TITL 4 WITHIN A SUMO PATHWAY JRNL REF J.MOL.BIOL. V. 369 619 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17475278 JRNL DOI 10.1016/J.JMB.2007.04.007 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 50250 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2521 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3240 REMARK 3 BIN FREE R VALUE : 0.3020 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 171 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3915 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 375 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.87500 REMARK 3 B22 (A**2) : 2.53900 REMARK 3 B33 (A**2) : -6.41400 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.31900 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.575 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: GEOMETRY ERRORS FOR PROLINE D106 AND REMARK 3 D1020 ARE DUE TO POOR DENSITY OVER THIS REGION. REMARK 4 REMARK 4 2EKE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-MAR-07. REMARK 100 THE DEPOSITION ID IS D_1000026772. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54517 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.870 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 56.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.19900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 10.10 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 2GJD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG 3350, 0.2M MAGNESIUM CHLORIDE, REMARK 280 0.1M BIS-TRIS, PH 5.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 60.44550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.28900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 60.44550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 42.28900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ASYMMETRIC UNIT CONTAINS 2 BIOLOGICAL UNITS. EACH UNIT REMARK 300 IS COMPRISED OF CHAIN A AND C OR B AND D. THE BIOLOGICAL UNIT IS REMARK 300 THE NON-COVALENT INTERACTION BETWEEN YUBC9 AND SMT3P. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 LYS A 157 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 LYS B 157 REMARK 465 MET C 93 REMARK 465 GLY C 94 REMARK 465 SER C 95 REMARK 465 SER C 96 REMARK 465 HIS C 97 REMARK 465 HIS C 98 REMARK 465 HIS C 99 REMARK 465 HIS C 100 REMARK 465 HIS C 101 REMARK 465 HIS C 102 REMARK 465 SER C 103 REMARK 465 GLN C 104 REMARK 465 ILE C 1096 REMARK 465 GLY C 1097 REMARK 465 GLY C 1098 REMARK 465 MET D 93 REMARK 465 GLY D 94 REMARK 465 SER D 95 REMARK 465 SER D 96 REMARK 465 HIS D 97 REMARK 465 HIS D 98 REMARK 465 HIS D 99 REMARK 465 HIS D 100 REMARK 465 HIS D 101 REMARK 465 HIS D 102 REMARK 465 SER D 103 REMARK 465 GLN D 104 REMARK 465 GLU D 1017 REMARK 465 VAL D 1018 REMARK 465 GLN D 1095 REMARK 465 ILE D 1096 REMARK 465 GLY D 1097 REMARK 465 GLY D 1098 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS C1015 CG CD CE NZ REMARK 470 VAL C1018 CG1 CG2 REMARK 470 LYS C1019 CG CD CE NZ REMARK 470 GLN C1095 CG CD OE1 NE2 REMARK 470 LYS D1019 CG CD CE NZ REMARK 470 ARG D1093 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO D 106 C - N - CA ANGL. DEV. = 20.5 DEGREES REMARK 500 PRO D 106 C - N - CD ANGL. DEV. = -19.5 DEGREES REMARK 500 PRO D 106 N - CA - C ANGL. DEV. = 16.4 DEGREES REMARK 500 PRO D1020 C - N - CA ANGL. DEV. = 38.3 DEGREES REMARK 500 PRO D1020 C - N - CD ANGL. DEV. = -44.2 DEGREES REMARK 500 PRO D1020 N - CA - C ANGL. DEV. = -16.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 83 142.55 -171.73 REMARK 500 GLN A 101 -97.93 -113.29 REMARK 500 ASN A 140 58.91 -149.78 REMARK 500 ASP B 33 37.20 -74.29 REMARK 500 SER B 35 -174.91 -67.41 REMARK 500 HIS B 83 140.45 -172.85 REMARK 500 GLN B 101 -103.99 -107.25 REMARK 500 PRO B 125 -9.86 -59.11 REMARK 500 PRO D 106 -160.44 -24.45 REMARK 500 LEU D 107 89.21 0.00 REMARK 500 PRO D1020 102.22 -167.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Z5S RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A COMPLEX BETWEEN UBC9, SUMO-1, RANGAP1, AND REMARK 900 NUP358/RANBP2 REMARK 900 RELATED ID: 1WYW RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF SUMO-1 CONJUGATED THYMINE DNA GLYCOSYLASE REMARK 900 RELATED ID: 1EUV RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF SUMO-1 IN COMPLEX WITH A SUMO-BINDING-MOTIF REMARK 900 (SBM) DBREF 2EKE A 1 157 UNP P50623 UBC9_YEAST 1 157 DBREF 2EKE B 1 157 UNP P50623 UBC9_YEAST 1 157 DBREF 2EKE C 1013 1098 UNP Q12306 SMT3_YEAST 13 98 DBREF 2EKE D 1013 1098 UNP Q12306 SMT3_YEAST 13 98 SEQADV 2EKE MET C 93 UNP Q12306 INITIATING METHIONINE SEQADV 2EKE GLY C 94 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE SER C 95 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE SER C 96 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE HIS C 97 UNP Q12306 EXPRESSION TAG SEQADV 2EKE HIS C 98 UNP Q12306 EXPRESSION TAG SEQADV 2EKE HIS C 99 UNP Q12306 EXPRESSION TAG SEQADV 2EKE HIS C 100 UNP Q12306 EXPRESSION TAG SEQADV 2EKE HIS C 101 UNP Q12306 EXPRESSION TAG SEQADV 2EKE HIS C 102 UNP Q12306 EXPRESSION TAG SEQADV 2EKE SER C 103 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE GLN C 104 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE ASP C 105 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE PRO C 106 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE LEU C 107 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE VAL C 108 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE PRO C 109 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE ARG C 110 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE GLY C 111 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE SER C 112 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE MET D 93 UNP Q12306 INITIATING METHIONINE SEQADV 2EKE GLY D 94 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE SER D 95 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE SER D 96 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE HIS D 97 UNP Q12306 EXPRESSION TAG SEQADV 2EKE HIS D 98 UNP Q12306 EXPRESSION TAG SEQADV 2EKE HIS D 99 UNP Q12306 EXPRESSION TAG SEQADV 2EKE HIS D 100 UNP Q12306 EXPRESSION TAG SEQADV 2EKE HIS D 101 UNP Q12306 EXPRESSION TAG SEQADV 2EKE HIS D 102 UNP Q12306 EXPRESSION TAG SEQADV 2EKE SER D 103 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE GLN D 104 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE ASP D 105 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE PRO D 106 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE LEU D 107 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE VAL D 108 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE PRO D 109 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE ARG D 110 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE GLY D 111 UNP Q12306 CLONING ARTIFACT SEQADV 2EKE SER D 112 UNP Q12306 CLONING ARTIFACT SEQRES 1 A 157 MET SER SER LEU CYS LEU GLN ARG LEU GLN GLU GLU ARG SEQRES 2 A 157 LYS LYS TRP ARG LYS ASP HIS PRO PHE GLY PHE TYR ALA SEQRES 3 A 157 LYS PRO VAL LYS LYS ALA ASP GLY SER MET ASP LEU GLN SEQRES 4 A 157 LYS TRP GLU ALA GLY ILE PRO GLY LYS GLU GLY THR ASN SEQRES 5 A 157 TRP ALA GLY GLY VAL TYR PRO ILE THR VAL GLU TYR PRO SEQRES 6 A 157 ASN GLU TYR PRO SER LYS PRO PRO LYS VAL LYS PHE PRO SEQRES 7 A 157 ALA GLY PHE TYR HIS PRO ASN VAL TYR PRO SER GLY THR SEQRES 8 A 157 ILE CYS LEU SER ILE LEU ASN GLU ASP GLN ASP TRP ARG SEQRES 9 A 157 PRO ALA ILE THR LEU LYS GLN ILE VAL LEU GLY VAL GLN SEQRES 10 A 157 ASP LEU LEU ASP SER PRO ASN PRO ASN SER PRO ALA GLN SEQRES 11 A 157 GLU PRO ALA TRP ARG SER PHE SER ARG ASN LYS ALA GLU SEQRES 12 A 157 TYR ASP LYS LYS VAL LEU LEU GLN ALA LYS GLN TYR SER SEQRES 13 A 157 LYS SEQRES 1 B 157 MET SER SER LEU CYS LEU GLN ARG LEU GLN GLU GLU ARG SEQRES 2 B 157 LYS LYS TRP ARG LYS ASP HIS PRO PHE GLY PHE TYR ALA SEQRES 3 B 157 LYS PRO VAL LYS LYS ALA ASP GLY SER MET ASP LEU GLN SEQRES 4 B 157 LYS TRP GLU ALA GLY ILE PRO GLY LYS GLU GLY THR ASN SEQRES 5 B 157 TRP ALA GLY GLY VAL TYR PRO ILE THR VAL GLU TYR PRO SEQRES 6 B 157 ASN GLU TYR PRO SER LYS PRO PRO LYS VAL LYS PHE PRO SEQRES 7 B 157 ALA GLY PHE TYR HIS PRO ASN VAL TYR PRO SER GLY THR SEQRES 8 B 157 ILE CYS LEU SER ILE LEU ASN GLU ASP GLN ASP TRP ARG SEQRES 9 B 157 PRO ALA ILE THR LEU LYS GLN ILE VAL LEU GLY VAL GLN SEQRES 10 B 157 ASP LEU LEU ASP SER PRO ASN PRO ASN SER PRO ALA GLN SEQRES 11 B 157 GLU PRO ALA TRP ARG SER PHE SER ARG ASN LYS ALA GLU SEQRES 12 B 157 TYR ASP LYS LYS VAL LEU LEU GLN ALA LYS GLN TYR SER SEQRES 13 B 157 LYS SEQRES 1 C 106 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 C 106 PRO LEU VAL PRO ARG GLY SER GLU VAL LYS PRO GLU VAL SEQRES 3 C 106 LYS PRO GLU THR HIS ILE ASN LEU LYS VAL SER ASP GLY SEQRES 4 C 106 SER SER GLU ILE PHE PHE LYS ILE LYS LYS THR THR PRO SEQRES 5 C 106 LEU ARG ARG LEU MET GLU ALA PHE ALA LYS ARG GLN GLY SEQRES 6 C 106 LYS GLU MET ASP SER LEU ARG PHE LEU TYR ASP GLY ILE SEQRES 7 C 106 ARG ILE GLN ALA ASP GLN THR PRO GLU ASP LEU ASP MET SEQRES 8 C 106 GLU ASP ASN ASP ILE ILE GLU ALA HIS ARG GLU GLN ILE SEQRES 9 C 106 GLY GLY SEQRES 1 D 106 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 D 106 PRO LEU VAL PRO ARG GLY SER GLU VAL LYS PRO GLU VAL SEQRES 3 D 106 LYS PRO GLU THR HIS ILE ASN LEU LYS VAL SER ASP GLY SEQRES 4 D 106 SER SER GLU ILE PHE PHE LYS ILE LYS LYS THR THR PRO SEQRES 5 D 106 LEU ARG ARG LEU MET GLU ALA PHE ALA LYS ARG GLN GLY SEQRES 6 D 106 LYS GLU MET ASP SER LEU ARG PHE LEU TYR ASP GLY ILE SEQRES 7 D 106 ARG ILE GLN ALA ASP GLN THR PRO GLU ASP LEU ASP MET SEQRES 8 D 106 GLU ASP ASN ASP ILE ILE GLU ALA HIS ARG GLU GLN ILE SEQRES 9 D 106 GLY GLY FORMUL 5 HOH *375(H2 O) HELIX 1 1 SER A 3 ASP A 19 1 17 HELIX 2 2 LEU A 94 ASN A 98 5 5 HELIX 3 3 THR A 108 SER A 122 1 15 HELIX 4 4 GLN A 130 ASN A 140 1 11 HELIX 5 5 ASN A 140 TYR A 155 1 16 HELIX 6 6 SER B 3 ASP B 19 1 17 HELIX 7 7 LEU B 94 ASN B 98 5 5 HELIX 8 8 THR B 108 LEU B 120 1 13 HELIX 9 9 GLN B 130 ASN B 140 1 11 HELIX 10 10 ASN B 140 TYR B 155 1 16 HELIX 11 11 LEU C 1045 GLY C 1057 1 13 HELIX 12 12 GLU C 1059 ASP C 1061 5 3 HELIX 13 13 LEU D 1045 GLY D 1057 1 13 HELIX 14 14 GLU D 1059 ASP D 1061 5 3 SHEET 1 A 4 TYR A 25 LYS A 30 0 SHEET 2 A 4 MET A 36 PRO A 46 -1 O ASP A 37 N VAL A 29 SHEET 3 A 4 VAL A 57 GLU A 63 -1 O TYR A 58 N ILE A 45 SHEET 4 A 4 LYS A 74 LYS A 76 -1 O LYS A 74 N GLU A 63 SHEET 1 B 4 TYR B 25 LYS B 30 0 SHEET 2 B 4 MET B 36 PRO B 46 -1 O LYS B 40 N VAL B 29 SHEET 3 B 4 VAL B 57 GLU B 63 -1 O TYR B 58 N ILE B 45 SHEET 4 B 4 LYS B 74 LYS B 76 -1 O LYS B 74 N GLU B 63 SHEET 1 C 5 GLU C1034 LYS C1040 0 SHEET 2 C 5 HIS C1023 SER C1029 -1 N VAL C1028 O ILE C1035 SHEET 3 C 5 ASP C1087 ARG C1093 1 O ALA C1091 N SER C1029 SHEET 4 C 5 LEU C1063 TYR C1067 -1 N LEU C1066 O GLU C1090 SHEET 5 C 5 ILE C1070 ARG C1071 -1 O ILE C1070 N TYR C1067 SHEET 1 D 5 GLU D1034 LYS D1040 0 SHEET 2 D 5 HIS D1023 SER D1029 -1 N VAL D1028 O ILE D1035 SHEET 3 D 5 ASP D1087 ARG D1093 1 O ALA D1091 N SER D1029 SHEET 4 D 5 LEU D1063 TYR D1067 -1 N ARG D1064 O HIS D1092 SHEET 5 D 5 ILE D1070 ARG D1071 -1 O ILE D1070 N TYR D1067 CISPEP 1 TYR A 68 PRO A 69 0 0.35 CISPEP 2 TYR B 68 PRO B 69 0 0.18 CRYST1 120.891 84.578 80.141 90.00 124.31 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008272 0.000000 0.005645 0.00000 SCALE2 0.000000 0.011823 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015107 0.00000