data_2EKP # _entry.id 2EKP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2EKP pdb_00002ekp 10.2210/pdb2ekp/pdb RCSB RCSB026783 ? ? WWPDB D_1000026783 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2EKQ 'Second form of the same protein' unspecified TargetDB ttk003000495.2 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2EKP _pdbx_database_status.recvd_initial_deposition_date 2007-03-23 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lokanath, N.K.' 1 'Pampa, K.J.' 2 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 3 # _citation.id primary _citation.title 'The first crystal structure of NAD-dependent 3-dehydro-2-deoxy-D-gluconate dehydrogenase from Thermus thermophilus HB8' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 70 _citation.page_first 994 _citation.page_last 1004 _citation.year 2014 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24699644 _citation.pdbx_database_id_DOI 10.1107/S1399004713034925 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pampa, K.J.' 1 ? primary 'Lokanath, N.K.' 2 ? primary 'Kunishima, N.' 3 ? primary 'Rai, R.V.' 4 ? # _cell.entry_id 2EKP _cell.length_a 66.873 _cell.length_b 87.233 _cell.length_c 92.093 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2EKP _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '2-deoxy-D-gluconate 3-dehydrogenase' 25702.729 1 1.1.1.125 ? ? ? 2 non-polymer syn NICOTINAMIDE-ADENINE-DINUCLEOTIDE 663.425 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 water nat water 18.015 395 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'gluconate dehydrogenase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAAAV NVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAK EWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGGFLAY ; _entity_poly.pdbx_seq_one_letter_code_can ;MERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAAAV NVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAK EWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGGFLAY ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ttk003000495.2 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 ARG n 1 4 LYS n 1 5 ALA n 1 6 LEU n 1 7 VAL n 1 8 THR n 1 9 GLY n 1 10 GLY n 1 11 SER n 1 12 ARG n 1 13 GLY n 1 14 ILE n 1 15 GLY n 1 16 ARG n 1 17 ALA n 1 18 ILE n 1 19 ALA n 1 20 GLU n 1 21 ALA n 1 22 LEU n 1 23 VAL n 1 24 ALA n 1 25 ARG n 1 26 GLY n 1 27 TYR n 1 28 ARG n 1 29 VAL n 1 30 ALA n 1 31 ILE n 1 32 ALA n 1 33 SER n 1 34 ARG n 1 35 ASN n 1 36 PRO n 1 37 GLU n 1 38 GLU n 1 39 ALA n 1 40 ALA n 1 41 GLN n 1 42 SER n 1 43 LEU n 1 44 GLY n 1 45 ALA n 1 46 VAL n 1 47 PRO n 1 48 LEU n 1 49 PRO n 1 50 THR n 1 51 ASP n 1 52 LEU n 1 53 GLU n 1 54 LYS n 1 55 ASP n 1 56 ASP n 1 57 PRO n 1 58 LYS n 1 59 GLY n 1 60 LEU n 1 61 VAL n 1 62 LYS n 1 63 ARG n 1 64 ALA n 1 65 LEU n 1 66 GLU n 1 67 ALA n 1 68 LEU n 1 69 GLY n 1 70 GLY n 1 71 LEU n 1 72 HIS n 1 73 VAL n 1 74 LEU n 1 75 VAL n 1 76 HIS n 1 77 ALA n 1 78 ALA n 1 79 ALA n 1 80 VAL n 1 81 ASN n 1 82 VAL n 1 83 ARG n 1 84 LYS n 1 85 PRO n 1 86 ALA n 1 87 LEU n 1 88 GLU n 1 89 LEU n 1 90 SER n 1 91 TYR n 1 92 GLU n 1 93 GLU n 1 94 TRP n 1 95 ARG n 1 96 ARG n 1 97 VAL n 1 98 LEU n 1 99 TYR n 1 100 LEU n 1 101 HIS n 1 102 LEU n 1 103 ASP n 1 104 VAL n 1 105 ALA n 1 106 PHE n 1 107 LEU n 1 108 LEU n 1 109 ALA n 1 110 GLN n 1 111 ALA n 1 112 ALA n 1 113 ALA n 1 114 PRO n 1 115 HIS n 1 116 MET n 1 117 ALA n 1 118 GLU n 1 119 ALA n 1 120 GLY n 1 121 TRP n 1 122 GLY n 1 123 ARG n 1 124 VAL n 1 125 LEU n 1 126 PHE n 1 127 ILE n 1 128 GLY n 1 129 SER n 1 130 VAL n 1 131 THR n 1 132 THR n 1 133 PHE n 1 134 THR n 1 135 ALA n 1 136 GLY n 1 137 GLY n 1 138 PRO n 1 139 VAL n 1 140 PRO n 1 141 ILE n 1 142 PRO n 1 143 ALA n 1 144 TYR n 1 145 THR n 1 146 THR n 1 147 ALA n 1 148 LYS n 1 149 THR n 1 150 ALA n 1 151 LEU n 1 152 LEU n 1 153 GLY n 1 154 LEU n 1 155 THR n 1 156 ARG n 1 157 ALA n 1 158 LEU n 1 159 ALA n 1 160 LYS n 1 161 GLU n 1 162 TRP n 1 163 ALA n 1 164 ARG n 1 165 LEU n 1 166 GLY n 1 167 ILE n 1 168 ARG n 1 169 VAL n 1 170 ASN n 1 171 LEU n 1 172 LEU n 1 173 CYS n 1 174 PRO n 1 175 GLY n 1 176 TYR n 1 177 VAL n 1 178 GLU n 1 179 THR n 1 180 GLU n 1 181 PHE n 1 182 THR n 1 183 LEU n 1 184 PRO n 1 185 LEU n 1 186 ARG n 1 187 GLN n 1 188 ASN n 1 189 PRO n 1 190 GLU n 1 191 LEU n 1 192 TYR n 1 193 GLU n 1 194 PRO n 1 195 ILE n 1 196 THR n 1 197 ALA n 1 198 ARG n 1 199 ILE n 1 200 PRO n 1 201 MET n 1 202 GLY n 1 203 ARG n 1 204 TRP n 1 205 ALA n 1 206 ARG n 1 207 PRO n 1 208 GLU n 1 209 GLU n 1 210 ILE n 1 211 ALA n 1 212 ARG n 1 213 VAL n 1 214 ALA n 1 215 ALA n 1 216 VAL n 1 217 LEU n 1 218 CYS n 1 219 GLY n 1 220 ASP n 1 221 GLU n 1 222 ALA n 1 223 GLU n 1 224 TYR n 1 225 LEU n 1 226 THR n 1 227 GLY n 1 228 GLN n 1 229 ALA n 1 230 VAL n 1 231 ALA n 1 232 VAL n 1 233 ASP n 1 234 GLY n 1 235 GLY n 1 236 PHE n 1 237 LEU n 1 238 ALA n 1 239 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species 'Thermus thermophilus' _entity_src_gen.gene_src_strain HB8 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermus thermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 300852 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-11a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q53W82_THET8 _struct_ref.pdbx_db_accession Q53W82 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAAAV NVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAK EWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGGFLAY ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2EKP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 239 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q53W82 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 239 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 239 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAD non-polymer . NICOTINAMIDE-ADENINE-DINUCLEOTIDE ? 'C21 H27 N7 O14 P2' 663.425 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2EKP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.61 _exptl_crystal.density_percent_sol 52.92 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.1 _exptl_crystal_grow.pdbx_details '28% PEG 1000, 0.2M NH2SO4, pH 7.1, VAPOR DIFFUSION, SITTING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type RIGAKU _diffrn_detector.pdbx_collection_date 2006-12-13 _diffrn_detector.details graphite # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator graphite _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL26B1' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL26B1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9 # _reflns.entry_id 2EKP _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 1.15 _reflns.d_resolution_low 50.0 _reflns.number_all 94622 _reflns.number_obs 94728 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.1 _reflns.B_iso_Wilson_estimate 7.3 _reflns.pdbx_redundancy 5.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.15 _reflns_shell.d_res_low 1.19 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2EKP _refine.ls_d_res_high 1.15 _refine.ls_d_res_low 23.50 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 94622 _refine.ls_number_reflns_obs 94728 _refine.ls_number_reflns_R_free 4743 _refine.ls_percent_reflns_obs 99.9 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.168 _refine.ls_R_factor_R_free 0.169 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB ENTRY 1X1E' _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1804 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 56 _refine_hist.number_atoms_solvent 395 _refine_hist.number_atoms_total 2255 _refine_hist.d_res_high 1.15 _refine_hist.d_res_low 23.50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.1 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.15 _refine_ls_shell.d_res_low 1.19 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work ? _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2EKP _struct.title 'Structure of TT0495 protein from Thermus thermophilus' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2EKP _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text ;gluconate dehydrogenase, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, OXIDOREDUCTASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 12 ? ARG A 25 ? ARG A 12 ARG A 25 1 ? 14 HELX_P HELX_P2 2 PRO A 36 ? GLY A 44 ? PRO A 36 GLY A 44 1 ? 9 HELX_P HELX_P3 3 ASP A 56 ? GLY A 69 ? ASP A 56 GLY A 69 1 ? 14 HELX_P HELX_P4 4 SER A 90 ? LEU A 102 ? SER A 90 LEU A 102 1 ? 13 HELX_P HELX_P5 5 LEU A 102 ? GLY A 120 ? LEU A 102 GLY A 120 1 ? 19 HELX_P HELX_P6 6 SER A 129 ? PHE A 133 ? SER A 129 PHE A 133 5 ? 5 HELX_P HELX_P7 7 ILE A 141 ? ALA A 163 ? ILE A 141 ALA A 163 1 ? 23 HELX_P HELX_P8 8 THR A 179 ? PHE A 181 ? THR A 179 PHE A 181 5 ? 3 HELX_P HELX_P9 9 THR A 182 ? GLN A 187 ? THR A 182 GLN A 187 1 ? 6 HELX_P HELX_P10 10 ASN A 188 ? ALA A 197 ? ASN A 188 ALA A 197 1 ? 10 HELX_P HELX_P11 11 ARG A 206 ? CYS A 218 ? ARG A 206 CYS A 218 1 ? 13 HELX_P HELX_P12 12 GLY A 219 ? GLU A 223 ? GLY A 219 GLU A 223 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 46 ? PRO A 49 ? VAL A 46 PRO A 49 A 2 ARG A 28 ? SER A 33 ? ARG A 28 SER A 33 A 3 LYS A 4 ? THR A 8 ? LYS A 4 THR A 8 A 4 VAL A 73 ? HIS A 76 ? VAL A 73 HIS A 76 A 5 GLY A 122 ? ILE A 127 ? GLY A 122 ILE A 127 A 6 ILE A 167 ? PRO A 174 ? ILE A 167 PRO A 174 A 7 ALA A 229 ? VAL A 232 ? ALA A 229 VAL A 232 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 46 ? O VAL A 46 N VAL A 29 ? N VAL A 29 A 2 3 O ARG A 28 ? O ARG A 28 N ALA A 5 ? N ALA A 5 A 3 4 N THR A 8 ? N THR A 8 O VAL A 75 ? O VAL A 75 A 4 5 N LEU A 74 ? N LEU A 74 O LEU A 125 ? O LEU A 125 A 5 6 N VAL A 124 ? N VAL A 124 O ARG A 168 ? O ARG A 168 A 6 7 N CYS A 173 ? N CYS A 173 O VAL A 230 ? O VAL A 230 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NAD 1300 ? 32 'BINDING SITE FOR RESIDUE NAD A 1300' AC2 Software A GOL 1301 ? 7 'BINDING SITE FOR RESIDUE GOL A 1301' AC3 Software A GOL 1302 ? 6 'BINDING SITE FOR RESIDUE GOL A 1302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 32 GLY A 9 ? GLY A 9 . ? 1_555 ? 2 AC1 32 SER A 11 ? SER A 11 . ? 1_555 ? 3 AC1 32 ARG A 12 ? ARG A 12 . ? 1_555 ? 4 AC1 32 GLY A 13 ? GLY A 13 . ? 1_555 ? 5 AC1 32 ILE A 14 ? ILE A 14 . ? 1_555 ? 6 AC1 32 SER A 33 ? SER A 33 . ? 1_555 ? 7 AC1 32 THR A 50 ? THR A 50 . ? 1_555 ? 8 AC1 32 ASP A 51 ? ASP A 51 . ? 1_555 ? 9 AC1 32 LEU A 52 ? LEU A 52 . ? 1_555 ? 10 AC1 32 GLU A 53 ? GLU A 53 . ? 1_555 ? 11 AC1 32 ALA A 77 ? ALA A 77 . ? 1_555 ? 12 AC1 32 ALA A 78 ? ALA A 78 . ? 1_555 ? 13 AC1 32 ALA A 79 ? ALA A 79 . ? 1_555 ? 14 AC1 32 HIS A 101 ? HIS A 101 . ? 1_555 ? 15 AC1 32 GLU A 118 ? GLU A 118 . ? 8_556 ? 16 AC1 32 ILE A 127 ? ILE A 127 . ? 1_555 ? 17 AC1 32 GLY A 128 ? GLY A 128 . ? 1_555 ? 18 AC1 32 TYR A 144 ? TYR A 144 . ? 1_555 ? 19 AC1 32 LYS A 148 ? LYS A 148 . ? 1_555 ? 20 AC1 32 PRO A 174 ? PRO A 174 . ? 1_555 ? 21 AC1 32 GLY A 175 ? GLY A 175 . ? 1_555 ? 22 AC1 32 THR A 179 ? THR A 179 . ? 1_555 ? 23 AC1 32 PHE A 181 ? PHE A 181 . ? 1_555 ? 24 AC1 32 THR A 182 ? THR A 182 . ? 1_555 ? 25 AC1 32 HOH E . ? HOH A 1347 . ? 1_555 ? 26 AC1 32 HOH E . ? HOH A 1353 . ? 1_555 ? 27 AC1 32 HOH E . ? HOH A 1354 . ? 1_555 ? 28 AC1 32 HOH E . ? HOH A 1415 . ? 1_555 ? 29 AC1 32 HOH E . ? HOH A 1474 . ? 1_555 ? 30 AC1 32 HOH E . ? HOH A 1475 . ? 1_555 ? 31 AC1 32 HOH E . ? HOH A 1498 . ? 1_555 ? 32 AC1 32 HOH E . ? HOH A 1554 . ? 1_555 ? 33 AC2 7 ASP A 56 ? ASP A 56 . ? 1_555 ? 34 AC2 7 LYS A 58 ? LYS A 58 . ? 1_555 ? 35 AC2 7 HOH E . ? HOH A 1390 . ? 3_657 ? 36 AC2 7 HOH E . ? HOH A 1424 . ? 1_555 ? 37 AC2 7 HOH E . ? HOH A 1547 . ? 1_555 ? 38 AC2 7 HOH E . ? HOH A 1632 . ? 1_555 ? 39 AC2 7 HOH E . ? HOH A 1637 . ? 1_555 ? 40 AC3 6 GLY A 70 ? GLY A 70 . ? 1_555 ? 41 AC3 6 LEU A 71 ? LEU A 71 . ? 1_555 ? 42 AC3 6 HIS A 72 ? HIS A 72 . ? 1_555 ? 43 AC3 6 HIS A 115 ? HIS A 115 . ? 1_555 ? 44 AC3 6 HOH E . ? HOH A 1343 . ? 1_555 ? 45 AC3 6 HOH E . ? HOH A 1634 . ? 1_555 ? # _database_PDB_matrix.entry_id 2EKP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2EKP _atom_sites.fract_transf_matrix[1][1] 0.014954 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011464 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010859 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLU 2 2 2 GLU GLU A . n A 1 3 ARG 3 3 3 ARG ARG A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 TYR 27 27 27 TYR TYR A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 PRO 49 49 49 PRO PRO A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 HIS 72 72 72 HIS HIS A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 HIS 76 76 76 HIS HIS A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 PRO 85 85 85 PRO PRO A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 TRP 94 94 94 TRP TRP A . n A 1 95 ARG 95 95 95 ARG ARG A . n A 1 96 ARG 96 96 96 ARG ARG A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 TYR 99 99 99 TYR TYR A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 HIS 101 101 101 HIS HIS A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 VAL 104 104 104 VAL VAL A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 PHE 106 106 106 PHE PHE A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 GLN 110 110 110 GLN GLN A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 ALA 113 113 113 ALA ALA A . n A 1 114 PRO 114 114 114 PRO PRO A . n A 1 115 HIS 115 115 115 HIS HIS A . n A 1 116 MET 116 116 116 MET MET A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 TRP 121 121 121 TRP TRP A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 ARG 123 123 123 ARG ARG A . n A 1 124 VAL 124 124 124 VAL VAL A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 PHE 126 126 126 PHE PHE A . n A 1 127 ILE 127 127 127 ILE ILE A . n A 1 128 GLY 128 128 128 GLY GLY A . n A 1 129 SER 129 129 129 SER SER A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 THR 131 131 131 THR THR A . n A 1 132 THR 132 132 132 THR THR A . n A 1 133 PHE 133 133 133 PHE PHE A . n A 1 134 THR 134 134 134 THR THR A . n A 1 135 ALA 135 135 135 ALA ALA A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 GLY 137 137 137 GLY GLY A . n A 1 138 PRO 138 138 138 PRO PRO A . n A 1 139 VAL 139 139 139 VAL VAL A . n A 1 140 PRO 140 140 140 PRO PRO A . n A 1 141 ILE 141 141 141 ILE ILE A . n A 1 142 PRO 142 142 142 PRO PRO A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 TYR 144 144 144 TYR TYR A . n A 1 145 THR 145 145 145 THR THR A . n A 1 146 THR 146 146 146 THR THR A . n A 1 147 ALA 147 147 147 ALA ALA A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 THR 149 149 149 THR THR A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 GLY 153 153 153 GLY GLY A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 THR 155 155 155 THR THR A . n A 1 156 ARG 156 156 156 ARG ARG A . n A 1 157 ALA 157 157 157 ALA ALA A . n A 1 158 LEU 158 158 158 LEU LEU A . n A 1 159 ALA 159 159 159 ALA ALA A . n A 1 160 LYS 160 160 160 LYS LYS A . n A 1 161 GLU 161 161 161 GLU GLU A . n A 1 162 TRP 162 162 162 TRP TRP A . n A 1 163 ALA 163 163 163 ALA ALA A . n A 1 164 ARG 164 164 164 ARG ARG A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 GLY 166 166 166 GLY GLY A . n A 1 167 ILE 167 167 167 ILE ILE A . n A 1 168 ARG 168 168 168 ARG ARG A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 ASN 170 170 170 ASN ASN A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 LEU 172 172 172 LEU LEU A . n A 1 173 CYS 173 173 173 CYS CYS A . n A 1 174 PRO 174 174 174 PRO PRO A . n A 1 175 GLY 175 175 175 GLY GLY A . n A 1 176 TYR 176 176 176 TYR TYR A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 GLU 178 178 178 GLU GLU A . n A 1 179 THR 179 179 179 THR THR A . n A 1 180 GLU 180 180 180 GLU GLU A . n A 1 181 PHE 181 181 181 PHE PHE A . n A 1 182 THR 182 182 182 THR THR A . n A 1 183 LEU 183 183 183 LEU LEU A . n A 1 184 PRO 184 184 184 PRO PRO A . n A 1 185 LEU 185 185 185 LEU LEU A . n A 1 186 ARG 186 186 186 ARG ARG A . n A 1 187 GLN 187 187 187 GLN GLN A . n A 1 188 ASN 188 188 188 ASN ASN A . n A 1 189 PRO 189 189 189 PRO PRO A . n A 1 190 GLU 190 190 190 GLU GLU A . n A 1 191 LEU 191 191 191 LEU LEU A . n A 1 192 TYR 192 192 192 TYR TYR A . n A 1 193 GLU 193 193 193 GLU GLU A . n A 1 194 PRO 194 194 194 PRO PRO A . n A 1 195 ILE 195 195 195 ILE ILE A . n A 1 196 THR 196 196 196 THR THR A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 ARG 198 198 198 ARG ARG A . n A 1 199 ILE 199 199 199 ILE ILE A . n A 1 200 PRO 200 200 200 PRO PRO A . n A 1 201 MET 201 201 201 MET MET A . n A 1 202 GLY 202 202 202 GLY GLY A . n A 1 203 ARG 203 203 203 ARG ARG A . n A 1 204 TRP 204 204 204 TRP TRP A . n A 1 205 ALA 205 205 205 ALA ALA A . n A 1 206 ARG 206 206 206 ARG ARG A . n A 1 207 PRO 207 207 207 PRO PRO A . n A 1 208 GLU 208 208 208 GLU GLU A . n A 1 209 GLU 209 209 209 GLU GLU A . n A 1 210 ILE 210 210 210 ILE ILE A . n A 1 211 ALA 211 211 211 ALA ALA A . n A 1 212 ARG 212 212 212 ARG ARG A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 ALA 214 214 214 ALA ALA A . n A 1 215 ALA 215 215 215 ALA ALA A . n A 1 216 VAL 216 216 216 VAL VAL A . n A 1 217 LEU 217 217 217 LEU LEU A . n A 1 218 CYS 218 218 218 CYS CYS A . n A 1 219 GLY 219 219 219 GLY GLY A . n A 1 220 ASP 220 220 220 ASP ASP A . n A 1 221 GLU 221 221 221 GLU GLU A . n A 1 222 ALA 222 222 222 ALA ALA A . n A 1 223 GLU 223 223 223 GLU GLU A . n A 1 224 TYR 224 224 224 TYR TYR A . n A 1 225 LEU 225 225 225 LEU LEU A . n A 1 226 THR 226 226 226 THR THR A . n A 1 227 GLY 227 227 227 GLY GLY A . n A 1 228 GLN 228 228 228 GLN GLN A . n A 1 229 ALA 229 229 229 ALA ALA A . n A 1 230 VAL 230 230 230 VAL VAL A . n A 1 231 ALA 231 231 231 ALA ALA A . n A 1 232 VAL 232 232 232 VAL VAL A . n A 1 233 ASP 233 233 233 ASP ASP A . n A 1 234 GLY 234 234 234 GLY GLY A . n A 1 235 GLY 235 235 235 GLY GLY A . n A 1 236 PHE 236 236 236 PHE PHE A . n A 1 237 LEU 237 237 237 LEU LEU A . n A 1 238 ALA 238 238 238 ALA ALA A . n A 1 239 TYR 239 239 239 TYR TYR A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAD 1 1300 300 NAD NAD A . C 3 GOL 1 1301 301 GOL GOL A . D 3 GOL 1 1302 302 GOL GOL A . E 4 HOH 1 1303 1 HOH HOH A . E 4 HOH 2 1304 2 HOH HOH A . E 4 HOH 3 1305 3 HOH HOH A . E 4 HOH 4 1306 4 HOH HOH A . E 4 HOH 5 1307 5 HOH HOH A . E 4 HOH 6 1308 6 HOH HOH A . E 4 HOH 7 1309 7 HOH HOH A . E 4 HOH 8 1310 8 HOH HOH A . E 4 HOH 9 1311 9 HOH HOH A . E 4 HOH 10 1312 10 HOH HOH A . E 4 HOH 11 1313 11 HOH HOH A . E 4 HOH 12 1314 12 HOH HOH A . E 4 HOH 13 1315 13 HOH HOH A . E 4 HOH 14 1316 14 HOH HOH A . E 4 HOH 15 1317 15 HOH HOH A . E 4 HOH 16 1318 16 HOH HOH A . E 4 HOH 17 1319 17 HOH HOH A . E 4 HOH 18 1320 18 HOH HOH A . E 4 HOH 19 1321 19 HOH HOH A . E 4 HOH 20 1322 20 HOH HOH A . E 4 HOH 21 1323 21 HOH HOH A . E 4 HOH 22 1324 22 HOH HOH A . E 4 HOH 23 1325 23 HOH HOH A . E 4 HOH 24 1326 24 HOH HOH A . E 4 HOH 25 1327 25 HOH HOH A . E 4 HOH 26 1328 26 HOH HOH A . E 4 HOH 27 1329 27 HOH HOH A . E 4 HOH 28 1330 28 HOH HOH A . E 4 HOH 29 1331 29 HOH HOH A . E 4 HOH 30 1332 30 HOH HOH A . E 4 HOH 31 1333 31 HOH HOH A . E 4 HOH 32 1334 32 HOH HOH A . E 4 HOH 33 1335 33 HOH HOH A . E 4 HOH 34 1336 34 HOH HOH A . E 4 HOH 35 1337 35 HOH HOH A . E 4 HOH 36 1338 36 HOH HOH A . E 4 HOH 37 1339 37 HOH HOH A . E 4 HOH 38 1340 38 HOH HOH A . E 4 HOH 39 1341 39 HOH HOH A . E 4 HOH 40 1342 40 HOH HOH A . E 4 HOH 41 1343 41 HOH HOH A . E 4 HOH 42 1344 42 HOH HOH A . E 4 HOH 43 1345 43 HOH HOH A . E 4 HOH 44 1346 44 HOH HOH A . E 4 HOH 45 1347 45 HOH HOH A . E 4 HOH 46 1348 46 HOH HOH A . E 4 HOH 47 1349 47 HOH HOH A . E 4 HOH 48 1350 48 HOH HOH A . E 4 HOH 49 1351 49 HOH HOH A . E 4 HOH 50 1352 50 HOH HOH A . E 4 HOH 51 1353 51 HOH HOH A . E 4 HOH 52 1354 52 HOH HOH A . E 4 HOH 53 1355 53 HOH HOH A . E 4 HOH 54 1356 54 HOH HOH A . E 4 HOH 55 1357 55 HOH HOH A . E 4 HOH 56 1358 56 HOH HOH A . E 4 HOH 57 1359 57 HOH HOH A . E 4 HOH 58 1360 58 HOH HOH A . E 4 HOH 59 1361 59 HOH HOH A . E 4 HOH 60 1362 60 HOH HOH A . E 4 HOH 61 1363 61 HOH HOH A . E 4 HOH 62 1364 62 HOH HOH A . E 4 HOH 63 1365 63 HOH HOH A . E 4 HOH 64 1366 64 HOH HOH A . E 4 HOH 65 1367 65 HOH HOH A . E 4 HOH 66 1368 66 HOH HOH A . E 4 HOH 67 1369 67 HOH HOH A . E 4 HOH 68 1370 68 HOH HOH A . E 4 HOH 69 1371 69 HOH HOH A . E 4 HOH 70 1372 70 HOH HOH A . E 4 HOH 71 1373 71 HOH HOH A . E 4 HOH 72 1374 72 HOH HOH A . E 4 HOH 73 1375 73 HOH HOH A . E 4 HOH 74 1376 74 HOH HOH A . E 4 HOH 75 1377 75 HOH HOH A . E 4 HOH 76 1378 76 HOH HOH A . E 4 HOH 77 1379 77 HOH HOH A . E 4 HOH 78 1380 78 HOH HOH A . E 4 HOH 79 1381 79 HOH HOH A . E 4 HOH 80 1382 80 HOH HOH A . E 4 HOH 81 1383 81 HOH HOH A . E 4 HOH 82 1384 82 HOH HOH A . E 4 HOH 83 1385 83 HOH HOH A . E 4 HOH 84 1386 84 HOH HOH A . E 4 HOH 85 1387 85 HOH HOH A . E 4 HOH 86 1388 86 HOH HOH A . E 4 HOH 87 1389 87 HOH HOH A . E 4 HOH 88 1390 88 HOH HOH A . E 4 HOH 89 1391 89 HOH HOH A . E 4 HOH 90 1392 90 HOH HOH A . E 4 HOH 91 1393 91 HOH HOH A . E 4 HOH 92 1394 92 HOH HOH A . E 4 HOH 93 1395 93 HOH HOH A . E 4 HOH 94 1396 94 HOH HOH A . E 4 HOH 95 1397 95 HOH HOH A . E 4 HOH 96 1398 96 HOH HOH A . E 4 HOH 97 1399 97 HOH HOH A . E 4 HOH 98 1400 98 HOH HOH A . E 4 HOH 99 1401 99 HOH HOH A . E 4 HOH 100 1402 100 HOH HOH A . E 4 HOH 101 1403 101 HOH HOH A . E 4 HOH 102 1404 102 HOH HOH A . E 4 HOH 103 1405 103 HOH HOH A . E 4 HOH 104 1406 104 HOH HOH A . E 4 HOH 105 1407 105 HOH HOH A . E 4 HOH 106 1408 106 HOH HOH A . E 4 HOH 107 1409 107 HOH HOH A . E 4 HOH 108 1410 108 HOH HOH A . E 4 HOH 109 1411 109 HOH HOH A . E 4 HOH 110 1412 110 HOH HOH A . E 4 HOH 111 1413 111 HOH HOH A . E 4 HOH 112 1414 112 HOH HOH A . E 4 HOH 113 1415 113 HOH HOH A . E 4 HOH 114 1416 114 HOH HOH A . E 4 HOH 115 1417 115 HOH HOH A . E 4 HOH 116 1418 116 HOH HOH A . E 4 HOH 117 1419 117 HOH HOH A . E 4 HOH 118 1420 118 HOH HOH A . E 4 HOH 119 1421 119 HOH HOH A . E 4 HOH 120 1422 120 HOH HOH A . E 4 HOH 121 1423 121 HOH HOH A . E 4 HOH 122 1424 122 HOH HOH A . E 4 HOH 123 1425 123 HOH HOH A . E 4 HOH 124 1426 124 HOH HOH A . E 4 HOH 125 1427 125 HOH HOH A . E 4 HOH 126 1428 126 HOH HOH A . E 4 HOH 127 1429 127 HOH HOH A . E 4 HOH 128 1430 128 HOH HOH A . E 4 HOH 129 1431 129 HOH HOH A . E 4 HOH 130 1432 130 HOH HOH A . E 4 HOH 131 1433 131 HOH HOH A . E 4 HOH 132 1434 132 HOH HOH A . E 4 HOH 133 1435 133 HOH HOH A . E 4 HOH 134 1436 134 HOH HOH A . E 4 HOH 135 1437 135 HOH HOH A . E 4 HOH 136 1438 136 HOH HOH A . E 4 HOH 137 1439 137 HOH HOH A . E 4 HOH 138 1440 138 HOH HOH A . E 4 HOH 139 1441 139 HOH HOH A . E 4 HOH 140 1442 140 HOH HOH A . E 4 HOH 141 1443 141 HOH HOH A . E 4 HOH 142 1444 142 HOH HOH A . E 4 HOH 143 1445 143 HOH HOH A . E 4 HOH 144 1446 144 HOH HOH A . E 4 HOH 145 1447 145 HOH HOH A . E 4 HOH 146 1448 146 HOH HOH A . E 4 HOH 147 1449 147 HOH HOH A . E 4 HOH 148 1450 148 HOH HOH A . E 4 HOH 149 1451 149 HOH HOH A . E 4 HOH 150 1452 150 HOH HOH A . E 4 HOH 151 1453 151 HOH HOH A . E 4 HOH 152 1454 152 HOH HOH A . E 4 HOH 153 1455 153 HOH HOH A . E 4 HOH 154 1456 154 HOH HOH A . E 4 HOH 155 1457 155 HOH HOH A . E 4 HOH 156 1458 156 HOH HOH A . E 4 HOH 157 1459 157 HOH HOH A . E 4 HOH 158 1460 158 HOH HOH A . E 4 HOH 159 1461 159 HOH HOH A . E 4 HOH 160 1462 160 HOH HOH A . E 4 HOH 161 1463 161 HOH HOH A . E 4 HOH 162 1464 162 HOH HOH A . E 4 HOH 163 1465 163 HOH HOH A . E 4 HOH 164 1466 164 HOH HOH A . E 4 HOH 165 1467 165 HOH HOH A . E 4 HOH 166 1468 166 HOH HOH A . E 4 HOH 167 1469 167 HOH HOH A . E 4 HOH 168 1470 168 HOH HOH A . E 4 HOH 169 1471 169 HOH HOH A . E 4 HOH 170 1472 170 HOH HOH A . E 4 HOH 171 1473 171 HOH HOH A . E 4 HOH 172 1474 172 HOH HOH A . E 4 HOH 173 1475 173 HOH HOH A . E 4 HOH 174 1476 174 HOH HOH A . E 4 HOH 175 1477 175 HOH HOH A . E 4 HOH 176 1478 176 HOH HOH A . E 4 HOH 177 1479 177 HOH HOH A . E 4 HOH 178 1480 178 HOH HOH A . E 4 HOH 179 1481 179 HOH HOH A . E 4 HOH 180 1482 180 HOH HOH A . E 4 HOH 181 1483 181 HOH HOH A . E 4 HOH 182 1484 182 HOH HOH A . E 4 HOH 183 1485 183 HOH HOH A . E 4 HOH 184 1486 184 HOH HOH A . E 4 HOH 185 1487 185 HOH HOH A . E 4 HOH 186 1488 186 HOH HOH A . E 4 HOH 187 1489 187 HOH HOH A . E 4 HOH 188 1490 188 HOH HOH A . E 4 HOH 189 1491 189 HOH HOH A . E 4 HOH 190 1492 190 HOH HOH A . E 4 HOH 191 1493 191 HOH HOH A . E 4 HOH 192 1494 192 HOH HOH A . E 4 HOH 193 1495 193 HOH HOH A . E 4 HOH 194 1496 194 HOH HOH A . E 4 HOH 195 1497 195 HOH HOH A . E 4 HOH 196 1498 196 HOH HOH A . E 4 HOH 197 1499 197 HOH HOH A . E 4 HOH 198 1500 198 HOH HOH A . E 4 HOH 199 1501 199 HOH HOH A . E 4 HOH 200 1502 200 HOH HOH A . E 4 HOH 201 1503 201 HOH HOH A . E 4 HOH 202 1504 202 HOH HOH A . E 4 HOH 203 1505 203 HOH HOH A . E 4 HOH 204 1506 204 HOH HOH A . E 4 HOH 205 1507 205 HOH HOH A . E 4 HOH 206 1508 206 HOH HOH A . E 4 HOH 207 1509 207 HOH HOH A . E 4 HOH 208 1510 208 HOH HOH A . E 4 HOH 209 1511 209 HOH HOH A . E 4 HOH 210 1512 210 HOH HOH A . E 4 HOH 211 1513 211 HOH HOH A . E 4 HOH 212 1514 212 HOH HOH A . E 4 HOH 213 1515 213 HOH HOH A . E 4 HOH 214 1516 214 HOH HOH A . E 4 HOH 215 1517 215 HOH HOH A . E 4 HOH 216 1518 216 HOH HOH A . E 4 HOH 217 1519 217 HOH HOH A . E 4 HOH 218 1520 218 HOH HOH A . E 4 HOH 219 1521 219 HOH HOH A . E 4 HOH 220 1522 220 HOH HOH A . E 4 HOH 221 1523 221 HOH HOH A . E 4 HOH 222 1524 222 HOH HOH A . E 4 HOH 223 1525 223 HOH HOH A . E 4 HOH 224 1526 224 HOH HOH A . E 4 HOH 225 1527 225 HOH HOH A . E 4 HOH 226 1528 226 HOH HOH A . E 4 HOH 227 1529 227 HOH HOH A . E 4 HOH 228 1530 228 HOH HOH A . E 4 HOH 229 1531 229 HOH HOH A . E 4 HOH 230 1532 230 HOH HOH A . E 4 HOH 231 1533 231 HOH HOH A . E 4 HOH 232 1534 232 HOH HOH A . E 4 HOH 233 1535 233 HOH HOH A . E 4 HOH 234 1536 234 HOH HOH A . E 4 HOH 235 1537 235 HOH HOH A . E 4 HOH 236 1538 236 HOH HOH A . E 4 HOH 237 1539 237 HOH HOH A . E 4 HOH 238 1540 238 HOH HOH A . E 4 HOH 239 1541 239 HOH HOH A . E 4 HOH 240 1542 240 HOH HOH A . E 4 HOH 241 1543 241 HOH HOH A . E 4 HOH 242 1544 242 HOH HOH A . E 4 HOH 243 1545 243 HOH HOH A . E 4 HOH 244 1546 244 HOH HOH A . E 4 HOH 245 1547 245 HOH HOH A . E 4 HOH 246 1548 246 HOH HOH A . E 4 HOH 247 1549 247 HOH HOH A . E 4 HOH 248 1550 248 HOH HOH A . E 4 HOH 249 1551 249 HOH HOH A . E 4 HOH 250 1552 250 HOH HOH A . E 4 HOH 251 1553 251 HOH HOH A . E 4 HOH 252 1554 252 HOH HOH A . E 4 HOH 253 1555 253 HOH HOH A . E 4 HOH 254 1556 254 HOH HOH A . E 4 HOH 255 1557 255 HOH HOH A . E 4 HOH 256 1558 256 HOH HOH A . E 4 HOH 257 1559 257 HOH HOH A . E 4 HOH 258 1560 258 HOH HOH A . E 4 HOH 259 1561 259 HOH HOH A . E 4 HOH 260 1562 260 HOH HOH A . E 4 HOH 261 1563 261 HOH HOH A . E 4 HOH 262 1564 262 HOH HOH A . E 4 HOH 263 1565 263 HOH HOH A . E 4 HOH 264 1566 264 HOH HOH A . E 4 HOH 265 1567 265 HOH HOH A . E 4 HOH 266 1568 266 HOH HOH A . E 4 HOH 267 1569 267 HOH HOH A . E 4 HOH 268 1570 268 HOH HOH A . E 4 HOH 269 1571 269 HOH HOH A . E 4 HOH 270 1572 270 HOH HOH A . E 4 HOH 271 1573 271 HOH HOH A . E 4 HOH 272 1574 272 HOH HOH A . E 4 HOH 273 1575 273 HOH HOH A . E 4 HOH 274 1576 274 HOH HOH A . E 4 HOH 275 1577 275 HOH HOH A . E 4 HOH 276 1578 276 HOH HOH A . E 4 HOH 277 1579 277 HOH HOH A . E 4 HOH 278 1580 278 HOH HOH A . E 4 HOH 279 1581 279 HOH HOH A . E 4 HOH 280 1582 280 HOH HOH A . E 4 HOH 281 1583 281 HOH HOH A . E 4 HOH 282 1584 282 HOH HOH A . E 4 HOH 283 1585 283 HOH HOH A . E 4 HOH 284 1586 284 HOH HOH A . E 4 HOH 285 1587 285 HOH HOH A . E 4 HOH 286 1588 286 HOH HOH A . E 4 HOH 287 1589 287 HOH HOH A . E 4 HOH 288 1590 288 HOH HOH A . E 4 HOH 289 1591 289 HOH HOH A . E 4 HOH 290 1592 290 HOH HOH A . E 4 HOH 291 1593 291 HOH HOH A . E 4 HOH 292 1594 292 HOH HOH A . E 4 HOH 293 1595 293 HOH HOH A . E 4 HOH 294 1596 294 HOH HOH A . E 4 HOH 295 1597 295 HOH HOH A . E 4 HOH 296 1598 296 HOH HOH A . E 4 HOH 297 1599 297 HOH HOH A . E 4 HOH 298 1600 298 HOH HOH A . E 4 HOH 299 1601 299 HOH HOH A . E 4 HOH 300 1602 300 HOH HOH A . E 4 HOH 301 1603 301 HOH HOH A . E 4 HOH 302 1604 302 HOH HOH A . E 4 HOH 303 1605 303 HOH HOH A . E 4 HOH 304 1606 304 HOH HOH A . E 4 HOH 305 1607 305 HOH HOH A . E 4 HOH 306 1608 306 HOH HOH A . E 4 HOH 307 1609 307 HOH HOH A . E 4 HOH 308 1610 308 HOH HOH A . E 4 HOH 309 1611 309 HOH HOH A . E 4 HOH 310 1612 310 HOH HOH A . E 4 HOH 311 1613 311 HOH HOH A . E 4 HOH 312 1614 312 HOH HOH A . E 4 HOH 313 1615 313 HOH HOH A . E 4 HOH 314 1616 314 HOH HOH A . E 4 HOH 315 1617 315 HOH HOH A . E 4 HOH 316 1618 316 HOH HOH A . E 4 HOH 317 1619 317 HOH HOH A . E 4 HOH 318 1620 318 HOH HOH A . E 4 HOH 319 1621 319 HOH HOH A . E 4 HOH 320 1622 320 HOH HOH A . E 4 HOH 321 1623 321 HOH HOH A . E 4 HOH 322 1624 322 HOH HOH A . E 4 HOH 323 1625 323 HOH HOH A . E 4 HOH 324 1626 324 HOH HOH A . E 4 HOH 325 1627 325 HOH HOH A . E 4 HOH 326 1628 326 HOH HOH A . E 4 HOH 327 1629 327 HOH HOH A . E 4 HOH 328 1630 328 HOH HOH A . E 4 HOH 329 1631 329 HOH HOH A . E 4 HOH 330 1632 330 HOH HOH A . E 4 HOH 331 1633 331 HOH HOH A . E 4 HOH 332 1634 332 HOH HOH A . E 4 HOH 333 1635 333 HOH HOH A . E 4 HOH 334 1636 334 HOH HOH A . E 4 HOH 335 1637 335 HOH HOH A . E 4 HOH 336 1638 336 HOH HOH A . E 4 HOH 337 1639 337 HOH HOH A . E 4 HOH 338 1640 338 HOH HOH A . E 4 HOH 339 1641 339 HOH HOH A . E 4 HOH 340 1642 340 HOH HOH A . E 4 HOH 341 1643 341 HOH HOH A . E 4 HOH 342 1644 342 HOH HOH A . E 4 HOH 343 1645 343 HOH HOH A . E 4 HOH 344 1646 344 HOH HOH A . E 4 HOH 345 1647 345 HOH HOH A . E 4 HOH 346 1648 346 HOH HOH A . E 4 HOH 347 1649 347 HOH HOH A . E 4 HOH 348 1650 348 HOH HOH A . E 4 HOH 349 1651 349 HOH HOH A . E 4 HOH 350 1652 350 HOH HOH A . E 4 HOH 351 1653 351 HOH HOH A . E 4 HOH 352 1654 352 HOH HOH A . E 4 HOH 353 1655 353 HOH HOH A . E 4 HOH 354 1656 354 HOH HOH A . E 4 HOH 355 1657 355 HOH HOH A . E 4 HOH 356 1658 356 HOH HOH A . E 4 HOH 357 1659 357 HOH HOH A . E 4 HOH 358 1660 358 HOH HOH A . E 4 HOH 359 1661 359 HOH HOH A . E 4 HOH 360 1662 360 HOH HOH A . E 4 HOH 361 1663 361 HOH HOH A . E 4 HOH 362 1664 362 HOH HOH A . E 4 HOH 363 1665 363 HOH HOH A . E 4 HOH 364 1666 364 HOH HOH A . E 4 HOH 365 1667 365 HOH HOH A . E 4 HOH 366 1668 366 HOH HOH A . E 4 HOH 367 1669 367 HOH HOH A . E 4 HOH 368 1670 368 HOH HOH A . E 4 HOH 369 1671 369 HOH HOH A . E 4 HOH 370 1672 370 HOH HOH A . E 4 HOH 371 1673 371 HOH HOH A . E 4 HOH 372 1674 372 HOH HOH A . E 4 HOH 373 1675 373 HOH HOH A . E 4 HOH 374 1676 374 HOH HOH A . E 4 HOH 375 1677 375 HOH HOH A . E 4 HOH 376 1678 376 HOH HOH A . E 4 HOH 377 1679 377 HOH HOH A . E 4 HOH 378 1680 378 HOH HOH A . E 4 HOH 379 1681 379 HOH HOH A . E 4 HOH 380 1682 380 HOH HOH A . E 4 HOH 381 1683 381 HOH HOH A . E 4 HOH 382 1684 382 HOH HOH A . E 4 HOH 383 1685 383 HOH HOH A . E 4 HOH 384 1686 384 HOH HOH A . E 4 HOH 385 1687 385 HOH HOH A . E 4 HOH 386 1688 386 HOH HOH A . E 4 HOH 387 1689 387 HOH HOH A . E 4 HOH 388 1690 388 HOH HOH A . E 4 HOH 389 1691 389 HOH HOH A . E 4 HOH 390 1692 390 HOH HOH A . E 4 HOH 391 1693 391 HOH HOH A . E 4 HOH 392 1694 392 HOH HOH A . E 4 HOH 393 1695 393 HOH HOH A . E 4 HOH 394 1696 394 HOH HOH A . E 4 HOH 395 1697 395 HOH HOH A . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA tetrameric 4 2 software_defined_assembly PISA dimeric 2 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2,3,4 A,B,C,D,E 2 1,2 A,B,C,D,E 3 1,3 A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 19780 ? 1 MORE -118.3 ? 1 'SSA (A^2)' 28220 ? 2 'ABSA (A^2)' 5930 ? 2 MORE -43.8 ? 2 'SSA (A^2)' 18070 ? 3 'ABSA (A^2)' 6230 ? 3 MORE -36.4 ? 3 'SSA (A^2)' 17770 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1.0000000000 0.0000000000 0.0000000000 66.8730000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_657 -x+1,y,-z+2 -1.0000000000 0.0000000000 0.0000000000 66.8730000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 184.1860000000 4 'crystal symmetry operation' 4_557 x,-y,-z+2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 184.1860000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 1643 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-04-01 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2014-04-16 4 'Structure model' 1 3 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 EPMR phasing . ? 2 CNS refinement . ? 3 HKL-2000 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 1582 ? ? O A HOH 1683 ? ? 1.87 2 1 O A HOH 1553 ? ? O A HOH 1554 ? ? 1.89 3 1 O A HOH 1610 ? ? O A HOH 1683 ? ? 1.91 4 1 O A HOH 1452 ? ? O A HOH 1694 ? ? 1.91 5 1 O A HOH 1459 ? ? O A HOH 1688 ? ? 2.07 6 1 O A HOH 1572 ? ? O A HOH 1693 ? ? 2.09 7 1 O A HOH 1578 ? ? O A HOH 1684 ? ? 2.09 8 1 O A HOH 1574 ? ? O A HOH 1694 ? ? 2.15 9 1 OE1 A GLU 193 ? ? O A HOH 1654 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 1607 ? ? 1_555 O A HOH 1682 ? ? 2_655 1.74 2 1 O A HOH 1454 ? ? 1_555 O A HOH 1697 ? ? 2_655 2.03 3 1 O A HOH 1378 ? ? 1_555 O A HOH 1677 ? ? 3_657 2.04 4 1 O A HOH 1416 ? ? 1_555 O A HOH 1668 ? ? 6_655 2.15 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A GLU 2 ? ? C A GLU 2 ? ? N A ARG 3 ? ? 133.23 117.20 16.03 2.20 Y 2 1 O A GLU 2 ? ? C A GLU 2 ? ? N A ARG 3 ? ? 104.58 122.70 -18.12 1.60 Y # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LYS _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 54 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -131.26 _pdbx_validate_torsion.psi -39.14 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id MET _pdbx_unobs_or_zero_occ_residues.auth_seq_id 1 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id MET _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 NAD PA P N S 264 NAD O1A O N N 265 NAD O2A O N N 266 NAD O5B O N N 267 NAD C5B C N N 268 NAD C4B C N R 269 NAD O4B O N N 270 NAD C3B C N S 271 NAD O3B O N N 272 NAD C2B C N R 273 NAD O2B O N N 274 NAD C1B C N R 275 NAD N9A N Y N 276 NAD C8A C Y N 277 NAD N7A N Y N 278 NAD C5A C Y N 279 NAD C6A C Y N 280 NAD N6A N N N 281 NAD N1A N Y N 282 NAD C2A C Y N 283 NAD N3A N Y N 284 NAD C4A C Y N 285 NAD O3 O N N 286 NAD PN P N N 287 NAD O1N O N N 288 NAD O2N O N N 289 NAD O5D O N N 290 NAD C5D C N N 291 NAD C4D C N R 292 NAD O4D O N N 293 NAD C3D C N S 294 NAD O3D O N N 295 NAD C2D C N R 296 NAD O2D O N N 297 NAD C1D C N R 298 NAD N1N N Y N 299 NAD C2N C Y N 300 NAD C3N C Y N 301 NAD C7N C N N 302 NAD O7N O N N 303 NAD N7N N N N 304 NAD C4N C Y N 305 NAD C5N C Y N 306 NAD C6N C Y N 307 NAD HOA2 H N N 308 NAD H51A H N N 309 NAD H52A H N N 310 NAD H4B H N N 311 NAD H3B H N N 312 NAD HO3A H N N 313 NAD H2B H N N 314 NAD HO2A H N N 315 NAD H1B H N N 316 NAD H8A H N N 317 NAD H61A H N N 318 NAD H62A H N N 319 NAD H2A H N N 320 NAD H51N H N N 321 NAD H52N H N N 322 NAD H4D H N N 323 NAD H3D H N N 324 NAD HO3N H N N 325 NAD H2D H N N 326 NAD HO2N H N N 327 NAD H1D H N N 328 NAD H2N H N N 329 NAD H71N H N N 330 NAD H72N H N N 331 NAD H4N H N N 332 NAD H5N H N N 333 NAD H6N H N N 334 PHE N N N N 335 PHE CA C N S 336 PHE C C N N 337 PHE O O N N 338 PHE CB C N N 339 PHE CG C Y N 340 PHE CD1 C Y N 341 PHE CD2 C Y N 342 PHE CE1 C Y N 343 PHE CE2 C Y N 344 PHE CZ C Y N 345 PHE OXT O N N 346 PHE H H N N 347 PHE H2 H N N 348 PHE HA H N N 349 PHE HB2 H N N 350 PHE HB3 H N N 351 PHE HD1 H N N 352 PHE HD2 H N N 353 PHE HE1 H N N 354 PHE HE2 H N N 355 PHE HZ H N N 356 PHE HXT H N N 357 PRO N N N N 358 PRO CA C N S 359 PRO C C N N 360 PRO O O N N 361 PRO CB C N N 362 PRO CG C N N 363 PRO CD C N N 364 PRO OXT O N N 365 PRO H H N N 366 PRO HA H N N 367 PRO HB2 H N N 368 PRO HB3 H N N 369 PRO HG2 H N N 370 PRO HG3 H N N 371 PRO HD2 H N N 372 PRO HD3 H N N 373 PRO HXT H N N 374 SER N N N N 375 SER CA C N S 376 SER C C N N 377 SER O O N N 378 SER CB C N N 379 SER OG O N N 380 SER OXT O N N 381 SER H H N N 382 SER H2 H N N 383 SER HA H N N 384 SER HB2 H N N 385 SER HB3 H N N 386 SER HG H N N 387 SER HXT H N N 388 THR N N N N 389 THR CA C N S 390 THR C C N N 391 THR O O N N 392 THR CB C N R 393 THR OG1 O N N 394 THR CG2 C N N 395 THR OXT O N N 396 THR H H N N 397 THR H2 H N N 398 THR HA H N N 399 THR HB H N N 400 THR HG1 H N N 401 THR HG21 H N N 402 THR HG22 H N N 403 THR HG23 H N N 404 THR HXT H N N 405 TRP N N N N 406 TRP CA C N S 407 TRP C C N N 408 TRP O O N N 409 TRP CB C N N 410 TRP CG C Y N 411 TRP CD1 C Y N 412 TRP CD2 C Y N 413 TRP NE1 N Y N 414 TRP CE2 C Y N 415 TRP CE3 C Y N 416 TRP CZ2 C Y N 417 TRP CZ3 C Y N 418 TRP CH2 C Y N 419 TRP OXT O N N 420 TRP H H N N 421 TRP H2 H N N 422 TRP HA H N N 423 TRP HB2 H N N 424 TRP HB3 H N N 425 TRP HD1 H N N 426 TRP HE1 H N N 427 TRP HE3 H N N 428 TRP HZ2 H N N 429 TRP HZ3 H N N 430 TRP HH2 H N N 431 TRP HXT H N N 432 TYR N N N N 433 TYR CA C N S 434 TYR C C N N 435 TYR O O N N 436 TYR CB C N N 437 TYR CG C Y N 438 TYR CD1 C Y N 439 TYR CD2 C Y N 440 TYR CE1 C Y N 441 TYR CE2 C Y N 442 TYR CZ C Y N 443 TYR OH O N N 444 TYR OXT O N N 445 TYR H H N N 446 TYR H2 H N N 447 TYR HA H N N 448 TYR HB2 H N N 449 TYR HB3 H N N 450 TYR HD1 H N N 451 TYR HD2 H N N 452 TYR HE1 H N N 453 TYR HE2 H N N 454 TYR HH H N N 455 TYR HXT H N N 456 VAL N N N N 457 VAL CA C N S 458 VAL C C N N 459 VAL O O N N 460 VAL CB C N N 461 VAL CG1 C N N 462 VAL CG2 C N N 463 VAL OXT O N N 464 VAL H H N N 465 VAL H2 H N N 466 VAL HA H N N 467 VAL HB H N N 468 VAL HG11 H N N 469 VAL HG12 H N N 470 VAL HG13 H N N 471 VAL HG21 H N N 472 VAL HG22 H N N 473 VAL HG23 H N N 474 VAL HXT H N N 475 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 NAD PA O1A doub N N 250 NAD PA O2A sing N N 251 NAD PA O5B sing N N 252 NAD PA O3 sing N N 253 NAD O2A HOA2 sing N N 254 NAD O5B C5B sing N N 255 NAD C5B C4B sing N N 256 NAD C5B H51A sing N N 257 NAD C5B H52A sing N N 258 NAD C4B O4B sing N N 259 NAD C4B C3B sing N N 260 NAD C4B H4B sing N N 261 NAD O4B C1B sing N N 262 NAD C3B O3B sing N N 263 NAD C3B C2B sing N N 264 NAD C3B H3B sing N N 265 NAD O3B HO3A sing N N 266 NAD C2B O2B sing N N 267 NAD C2B C1B sing N N 268 NAD C2B H2B sing N N 269 NAD O2B HO2A sing N N 270 NAD C1B N9A sing N N 271 NAD C1B H1B sing N N 272 NAD N9A C8A sing Y N 273 NAD N9A C4A sing Y N 274 NAD C8A N7A doub Y N 275 NAD C8A H8A sing N N 276 NAD N7A C5A sing Y N 277 NAD C5A C6A sing Y N 278 NAD C5A C4A doub Y N 279 NAD C6A N6A sing N N 280 NAD C6A N1A doub Y N 281 NAD N6A H61A sing N N 282 NAD N6A H62A sing N N 283 NAD N1A C2A sing Y N 284 NAD C2A N3A doub Y N 285 NAD C2A H2A sing N N 286 NAD N3A C4A sing Y N 287 NAD O3 PN sing N N 288 NAD PN O1N doub N N 289 NAD PN O2N sing N N 290 NAD PN O5D sing N N 291 NAD O5D C5D sing N N 292 NAD C5D C4D sing N N 293 NAD C5D H51N sing N N 294 NAD C5D H52N sing N N 295 NAD C4D O4D sing N N 296 NAD C4D C3D sing N N 297 NAD C4D H4D sing N N 298 NAD O4D C1D sing N N 299 NAD C3D O3D sing N N 300 NAD C3D C2D sing N N 301 NAD C3D H3D sing N N 302 NAD O3D HO3N sing N N 303 NAD C2D O2D sing N N 304 NAD C2D C1D sing N N 305 NAD C2D H2D sing N N 306 NAD O2D HO2N sing N N 307 NAD C1D N1N sing N N 308 NAD C1D H1D sing N N 309 NAD N1N C2N sing Y N 310 NAD N1N C6N doub Y N 311 NAD C2N C3N doub Y N 312 NAD C2N H2N sing N N 313 NAD C3N C7N sing N N 314 NAD C3N C4N sing Y N 315 NAD C7N O7N doub N N 316 NAD C7N N7N sing N N 317 NAD N7N H71N sing N N 318 NAD N7N H72N sing N N 319 NAD C4N C5N doub Y N 320 NAD C4N H4N sing N N 321 NAD C5N C6N sing Y N 322 NAD C5N H5N sing N N 323 NAD C6N H6N sing N N 324 PHE N CA sing N N 325 PHE N H sing N N 326 PHE N H2 sing N N 327 PHE CA C sing N N 328 PHE CA CB sing N N 329 PHE CA HA sing N N 330 PHE C O doub N N 331 PHE C OXT sing N N 332 PHE CB CG sing N N 333 PHE CB HB2 sing N N 334 PHE CB HB3 sing N N 335 PHE CG CD1 doub Y N 336 PHE CG CD2 sing Y N 337 PHE CD1 CE1 sing Y N 338 PHE CD1 HD1 sing N N 339 PHE CD2 CE2 doub Y N 340 PHE CD2 HD2 sing N N 341 PHE CE1 CZ doub Y N 342 PHE CE1 HE1 sing N N 343 PHE CE2 CZ sing Y N 344 PHE CE2 HE2 sing N N 345 PHE CZ HZ sing N N 346 PHE OXT HXT sing N N 347 PRO N CA sing N N 348 PRO N CD sing N N 349 PRO N H sing N N 350 PRO CA C sing N N 351 PRO CA CB sing N N 352 PRO CA HA sing N N 353 PRO C O doub N N 354 PRO C OXT sing N N 355 PRO CB CG sing N N 356 PRO CB HB2 sing N N 357 PRO CB HB3 sing N N 358 PRO CG CD sing N N 359 PRO CG HG2 sing N N 360 PRO CG HG3 sing N N 361 PRO CD HD2 sing N N 362 PRO CD HD3 sing N N 363 PRO OXT HXT sing N N 364 SER N CA sing N N 365 SER N H sing N N 366 SER N H2 sing N N 367 SER CA C sing N N 368 SER CA CB sing N N 369 SER CA HA sing N N 370 SER C O doub N N 371 SER C OXT sing N N 372 SER CB OG sing N N 373 SER CB HB2 sing N N 374 SER CB HB3 sing N N 375 SER OG HG sing N N 376 SER OXT HXT sing N N 377 THR N CA sing N N 378 THR N H sing N N 379 THR N H2 sing N N 380 THR CA C sing N N 381 THR CA CB sing N N 382 THR CA HA sing N N 383 THR C O doub N N 384 THR C OXT sing N N 385 THR CB OG1 sing N N 386 THR CB CG2 sing N N 387 THR CB HB sing N N 388 THR OG1 HG1 sing N N 389 THR CG2 HG21 sing N N 390 THR CG2 HG22 sing N N 391 THR CG2 HG23 sing N N 392 THR OXT HXT sing N N 393 TRP N CA sing N N 394 TRP N H sing N N 395 TRP N H2 sing N N 396 TRP CA C sing N N 397 TRP CA CB sing N N 398 TRP CA HA sing N N 399 TRP C O doub N N 400 TRP C OXT sing N N 401 TRP CB CG sing N N 402 TRP CB HB2 sing N N 403 TRP CB HB3 sing N N 404 TRP CG CD1 doub Y N 405 TRP CG CD2 sing Y N 406 TRP CD1 NE1 sing Y N 407 TRP CD1 HD1 sing N N 408 TRP CD2 CE2 doub Y N 409 TRP CD2 CE3 sing Y N 410 TRP NE1 CE2 sing Y N 411 TRP NE1 HE1 sing N N 412 TRP CE2 CZ2 sing Y N 413 TRP CE3 CZ3 doub Y N 414 TRP CE3 HE3 sing N N 415 TRP CZ2 CH2 doub Y N 416 TRP CZ2 HZ2 sing N N 417 TRP CZ3 CH2 sing Y N 418 TRP CZ3 HZ3 sing N N 419 TRP CH2 HH2 sing N N 420 TRP OXT HXT sing N N 421 TYR N CA sing N N 422 TYR N H sing N N 423 TYR N H2 sing N N 424 TYR CA C sing N N 425 TYR CA CB sing N N 426 TYR CA HA sing N N 427 TYR C O doub N N 428 TYR C OXT sing N N 429 TYR CB CG sing N N 430 TYR CB HB2 sing N N 431 TYR CB HB3 sing N N 432 TYR CG CD1 doub Y N 433 TYR CG CD2 sing Y N 434 TYR CD1 CE1 sing Y N 435 TYR CD1 HD1 sing N N 436 TYR CD2 CE2 doub Y N 437 TYR CD2 HD2 sing N N 438 TYR CE1 CZ doub Y N 439 TYR CE1 HE1 sing N N 440 TYR CE2 CZ sing Y N 441 TYR CE2 HE2 sing N N 442 TYR CZ OH sing N N 443 TYR OH HH sing N N 444 TYR OXT HXT sing N N 445 VAL N CA sing N N 446 VAL N H sing N N 447 VAL N H2 sing N N 448 VAL CA C sing N N 449 VAL CA CB sing N N 450 VAL CA HA sing N N 451 VAL C O doub N N 452 VAL C OXT sing N N 453 VAL CB CG1 sing N N 454 VAL CB CG2 sing N N 455 VAL CB HB sing N N 456 VAL CG1 HG11 sing N N 457 VAL CG1 HG12 sing N N 458 VAL CG1 HG13 sing N N 459 VAL CG2 HG21 sing N N 460 VAL CG2 HG22 sing N N 461 VAL CG2 HG23 sing N N 462 VAL OXT HXT sing N N 463 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 NICOTINAMIDE-ADENINE-DINUCLEOTIDE NAD 3 GLYCEROL GOL 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1X1E _pdbx_initial_refinement_model.details 'PDB ENTRY 1X1E' #