data_2ENO # _entry.id 2ENO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2ENO pdb_00002eno 10.2210/pdb2eno/pdb RCSB RCSB026883 ? ? WWPDB D_1000026883 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsi002006307.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2ENO _pdbx_database_status.recvd_initial_deposition_date 2007-03-28 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Endo, H.' 1 'Yoshida, M.' 2 'Hayashi, F.' 3 'Yokoyama, S.' 4 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 5 # _citation.id primary _citation.title 'Solution structure of the PDZ domain from human Synaptojanin 2 binding protein' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Endo, H.' 1 ? primary 'Yoshida, M.' 2 ? primary 'Hayashi, F.' 3 ? primary 'Yokoyama, S.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Synaptojanin-2-binding protein' _entity.formula_weight 12686.882 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'PDZ domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Mitochondrial outer membrane protein 25' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGMNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDL KNLLHQDAVDLFRNAGYAVSLRVQHRLQVQNGPISGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGMNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDL KNLLHQDAVDLFRNAGYAVSLRVQHRLQVQNGPISGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsi002006307.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 MET n 1 9 ASN n 1 10 GLY n 1 11 ARG n 1 12 VAL n 1 13 ASP n 1 14 TYR n 1 15 LEU n 1 16 VAL n 1 17 THR n 1 18 GLU n 1 19 GLU n 1 20 GLU n 1 21 ILE n 1 22 ASN n 1 23 LEU n 1 24 THR n 1 25 ARG n 1 26 GLY n 1 27 PRO n 1 28 SER n 1 29 GLY n 1 30 LEU n 1 31 GLY n 1 32 PHE n 1 33 ASN n 1 34 ILE n 1 35 VAL n 1 36 GLY n 1 37 GLY n 1 38 THR n 1 39 ASP n 1 40 GLN n 1 41 GLN n 1 42 TYR n 1 43 VAL n 1 44 SER n 1 45 ASN n 1 46 ASP n 1 47 SER n 1 48 GLY n 1 49 ILE n 1 50 TYR n 1 51 VAL n 1 52 SER n 1 53 ARG n 1 54 ILE n 1 55 LYS n 1 56 GLU n 1 57 ASN n 1 58 GLY n 1 59 ALA n 1 60 ALA n 1 61 ALA n 1 62 LEU n 1 63 ASP n 1 64 GLY n 1 65 ARG n 1 66 LEU n 1 67 GLN n 1 68 GLU n 1 69 GLY n 1 70 ASP n 1 71 LYS n 1 72 ILE n 1 73 LEU n 1 74 SER n 1 75 VAL n 1 76 ASN n 1 77 GLY n 1 78 GLN n 1 79 ASP n 1 80 LEU n 1 81 LYS n 1 82 ASN n 1 83 LEU n 1 84 LEU n 1 85 HIS n 1 86 GLN n 1 87 ASP n 1 88 ALA n 1 89 VAL n 1 90 ASP n 1 91 LEU n 1 92 PHE n 1 93 ARG n 1 94 ASN n 1 95 ALA n 1 96 GLY n 1 97 TYR n 1 98 ALA n 1 99 VAL n 1 100 SER n 1 101 LEU n 1 102 ARG n 1 103 VAL n 1 104 GLN n 1 105 HIS n 1 106 ARG n 1 107 LEU n 1 108 GLN n 1 109 VAL n 1 110 GLN n 1 111 ASN n 1 112 GLY n 1 113 PRO n 1 114 ILE n 1 115 SER n 1 116 GLY n 1 117 PRO n 1 118 SER n 1 119 SER n 1 120 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene SYNJ2BP _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050509-14 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'cell free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SYJ2B_HUMAN _struct_ref.pdbx_db_accession P57105 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQD AVDLFRNAGYAVSLRVQHRLQVQNGPI ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2ENO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 114 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P57105 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 107 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 114 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2ENO GLY A 1 ? UNP P57105 ? ? 'expression tag' 1 1 1 2ENO SER A 2 ? UNP P57105 ? ? 'expression tag' 2 2 1 2ENO SER A 3 ? UNP P57105 ? ? 'expression tag' 3 3 1 2ENO GLY A 4 ? UNP P57105 ? ? 'expression tag' 4 4 1 2ENO SER A 5 ? UNP P57105 ? ? 'expression tag' 5 5 1 2ENO SER A 6 ? UNP P57105 ? ? 'expression tag' 6 6 1 2ENO GLY A 7 ? UNP P57105 ? ? 'expression tag' 7 7 1 2ENO SER A 115 ? UNP P57105 ? ? 'expression tag' 115 8 1 2ENO GLY A 116 ? UNP P57105 ? ? 'expression tag' 116 9 1 2ENO PRO A 117 ? UNP P57105 ? ? 'expression tag' 117 10 1 2ENO SER A 118 ? UNP P57105 ? ? 'expression tag' 118 11 1 2ENO SER A 119 ? UNP P57105 ? ? 'expression tag' 119 12 1 2ENO GLY A 120 ? UNP P57105 ? ? 'expression tag' 120 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_13C-separated_NOESY 1 2 1 3D_15N-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.22mM 13C, 15N-labeled protein; 20mM d-Tris-HCl(pH 7.0), 100mM NaCl; 1mM d-DTT; 0.02% NaN3, 10% D2O; 90% H2O' _pdbx_nmr_sample_details.solvent_system '10% D2O; 90% H2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2ENO _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2ENO _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2ENO _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection VNMR 6.1c Varian 1 processing NMRPipe 20060702 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B. A.' 3 'data analysis' KUJIRA 0.9820 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2ENO _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2ENO _struct.title 'Solution structure of the PDZ domain from human Synaptojanin 2 binding protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2ENO _struct_keywords.pdbx_keywords ENDOCYTOSIS _struct_keywords.text ;Mitochondrial outer membrane protein 25, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, ENDOCYTOSIS ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 58 ? ASP A 63 ? GLY A 58 ASP A 63 1 ? 6 HELX_P HELX_P2 2 LEU A 84 ? ALA A 95 ? LEU A 84 ALA A 95 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 14 ? THR A 24 ? TYR A 14 THR A 24 A 2 ALA A 98 ? GLN A 108 ? ALA A 98 GLN A 108 A 3 LYS A 71 ? VAL A 75 ? LYS A 71 VAL A 75 A 4 ILE A 49 ? ILE A 54 ? ILE A 49 ILE A 54 A 5 PHE A 32 ? VAL A 35 ? PHE A 32 VAL A 35 B 1 TYR A 14 ? THR A 24 ? TYR A 14 THR A 24 B 2 ALA A 98 ? GLN A 108 ? ALA A 98 GLN A 108 B 3 LYS A 71 ? VAL A 75 ? LYS A 71 VAL A 75 B 4 GLN A 78 ? ASP A 79 ? GLN A 78 ASP A 79 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 21 ? N ILE A 21 O LEU A 101 ? O LEU A 101 A 2 3 O ARG A 102 ? O ARG A 102 N SER A 74 ? N SER A 74 A 3 4 O ILE A 72 ? O ILE A 72 N ILE A 49 ? N ILE A 49 A 4 5 O TYR A 50 ? O TYR A 50 N VAL A 35 ? N VAL A 35 B 1 2 N ILE A 21 ? N ILE A 21 O LEU A 101 ? O LEU A 101 B 2 3 O ARG A 102 ? O ARG A 102 N SER A 74 ? N SER A 74 B 3 4 N VAL A 75 ? N VAL A 75 O GLN A 78 ? O GLN A 78 # _database_PDB_matrix.entry_id 2ENO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2ENO _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 MET 8 8 8 MET MET A . n A 1 9 ASN 9 9 9 ASN ASN A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 ARG 11 11 11 ARG ARG A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 ASP 13 13 13 ASP ASP A . n A 1 14 TYR 14 14 14 TYR TYR A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 PRO 27 27 27 PRO PRO A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 PHE 32 32 32 PHE PHE A . n A 1 33 ASN 33 33 33 ASN ASN A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 THR 38 38 38 THR THR A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 TYR 42 42 42 TYR TYR A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 ASN 45 45 45 ASN ASN A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 TYR 50 50 50 TYR TYR A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 ARG 65 65 65 ARG ARG A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 GLN 67 67 67 GLN GLN A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 SER 74 74 74 SER SER A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 GLN 78 78 78 GLN GLN A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 ASN 82 82 82 ASN ASN A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 HIS 85 85 85 HIS HIS A . n A 1 86 GLN 86 86 86 GLN GLN A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 PHE 92 92 92 PHE PHE A . n A 1 93 ARG 93 93 93 ARG ARG A . n A 1 94 ASN 94 94 94 ASN ASN A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 TYR 97 97 97 TYR TYR A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 GLN 104 104 104 GLN GLN A . n A 1 105 HIS 105 105 105 HIS HIS A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 GLN 108 108 108 GLN GLN A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 GLN 110 110 110 GLN GLN A . n A 1 111 ASN 111 111 111 ASN ASN A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 PRO 113 113 113 PRO PRO A . n A 1 114 ILE 114 114 114 ILE ILE A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 PRO 117 117 117 PRO PRO A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 SER 119 119 119 SER SER A . n A 1 120 GLY 120 120 120 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-10-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_struct_assembly 4 3 'Structure model' pdbx_struct_oper_list 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 32 ? ? -172.88 144.78 2 1 GLN A 41 ? ? -37.46 100.89 3 1 TYR A 42 ? ? -39.78 -25.47 4 1 ARG A 65 ? ? -39.60 -73.53 5 1 ILE A 72 ? ? -62.69 95.95 6 1 ALA A 95 ? ? -37.04 -73.77 7 1 GLN A 110 ? ? -67.02 84.13 8 2 VAL A 12 ? ? -98.10 51.07 9 2 TYR A 14 ? ? -39.16 126.04 10 2 LEU A 30 ? ? -127.89 -72.05 11 2 GLN A 41 ? ? -42.86 109.16 12 2 TYR A 42 ? ? -49.43 -18.62 13 2 ASN A 57 ? ? -107.16 43.62 14 2 ARG A 65 ? ? -92.54 -62.04 15 2 GLU A 68 ? ? -43.25 161.37 16 2 ASN A 82 ? ? 34.41 43.04 17 2 TYR A 97 ? ? -39.20 -70.47 18 2 ASN A 111 ? ? -162.16 109.44 19 3 SER A 6 ? ? -39.68 135.32 20 3 VAL A 12 ? ? 37.79 40.32 21 3 SER A 28 ? ? -125.39 -55.34 22 3 TYR A 42 ? ? -39.73 -36.16 23 3 ASP A 46 ? ? -117.66 76.92 24 3 TYR A 97 ? ? -37.65 -72.17 25 4 SER A 3 ? ? -49.31 166.10 26 4 TYR A 14 ? ? -172.91 131.95 27 4 TYR A 42 ? ? -37.95 -28.97 28 4 ASP A 46 ? ? -102.47 72.06 29 4 LYS A 55 ? ? -48.97 152.20 30 4 TYR A 97 ? ? -48.29 -71.00 31 4 GLN A 108 ? ? -36.28 139.63 32 5 MET A 8 ? ? -42.43 163.94 33 5 ILE A 72 ? ? -62.31 93.13 34 5 ASN A 82 ? ? 39.17 54.96 35 5 SER A 115 ? ? -173.97 112.20 36 5 SER A 118 ? ? -35.34 110.34 37 6 TYR A 14 ? ? -34.65 119.74 38 6 LEU A 30 ? ? -128.58 -64.61 39 6 PHE A 32 ? ? -172.21 142.43 40 6 THR A 38 ? ? -38.03 -29.36 41 6 ASN A 57 ? ? -108.63 41.86 42 6 ILE A 72 ? ? -66.80 96.84 43 7 ASN A 9 ? ? 34.80 50.85 44 7 LEU A 30 ? ? -62.78 -179.96 45 7 PHE A 32 ? ? -170.72 141.27 46 7 GLN A 41 ? ? -34.39 105.42 47 7 ILE A 72 ? ? -58.85 95.96 48 7 SER A 119 ? ? -169.39 116.60 49 8 SER A 6 ? ? -43.43 101.69 50 8 LEU A 30 ? ? -54.69 -178.48 51 8 PHE A 32 ? ? -172.45 146.04 52 8 ILE A 72 ? ? -62.14 99.64 53 8 GLN A 108 ? ? -44.08 158.45 54 8 SER A 119 ? ? -35.77 109.18 55 9 VAL A 12 ? ? -94.62 42.55 56 9 ALA A 95 ? ? -42.53 -72.52 57 10 PHE A 32 ? ? -173.02 148.40 58 10 TYR A 42 ? ? -39.28 -36.92 59 10 SER A 47 ? ? -98.28 45.33 60 10 ASN A 57 ? ? -102.73 41.13 61 10 GLU A 68 ? ? -47.95 157.21 62 10 ILE A 72 ? ? -59.30 91.86 63 10 GLN A 110 ? ? -92.27 -63.11 64 10 PRO A 113 ? ? -69.75 2.02 65 10 ILE A 114 ? ? -34.03 149.50 66 10 SER A 115 ? ? -34.52 131.10 67 11 VAL A 12 ? ? -109.36 42.99 68 11 LEU A 30 ? ? -124.91 -68.50 69 11 PHE A 32 ? ? -171.29 142.95 70 11 LYS A 55 ? ? -49.25 163.07 71 11 ILE A 72 ? ? -65.64 95.26 72 12 LYS A 55 ? ? -48.61 105.78 73 12 ASN A 57 ? ? -113.90 53.87 74 12 GLN A 78 ? ? -67.42 -173.58 75 12 ALA A 95 ? ? -36.53 -72.87 76 12 GLN A 108 ? ? -43.59 154.26 77 13 VAL A 12 ? ? -61.82 76.50 78 13 LEU A 30 ? ? -112.49 -72.40 79 13 PHE A 32 ? ? -170.98 146.46 80 13 GLN A 41 ? ? -36.91 119.45 81 13 ASN A 57 ? ? -94.84 37.21 82 13 ILE A 72 ? ? -67.56 95.80 83 13 ASN A 111 ? ? -83.09 -70.26 84 13 PRO A 117 ? ? -69.72 95.05 85 14 SER A 2 ? ? -93.94 42.45 86 14 THR A 38 ? ? -38.79 -25.99 87 14 ARG A 65 ? ? -34.36 -33.10 88 14 ILE A 72 ? ? -68.07 94.80 89 14 PRO A 113 ? ? -69.78 1.20 90 14 ILE A 114 ? ? -34.09 144.37 91 14 SER A 118 ? ? 34.75 52.19 92 15 MET A 8 ? ? -83.03 44.58 93 15 ASN A 9 ? ? -58.89 175.13 94 15 ARG A 11 ? ? -47.89 173.79 95 15 SER A 47 ? ? -94.88 40.47 96 15 GLU A 68 ? ? -44.06 150.45 97 15 ILE A 72 ? ? -60.55 89.78 98 15 ASN A 76 ? ? 46.49 26.51 99 15 GLN A 78 ? ? -68.90 99.53 100 15 GLN A 110 ? ? -108.41 56.91 101 15 ASN A 111 ? ? -94.37 48.34 102 16 SER A 6 ? ? -91.04 -68.51 103 16 PHE A 32 ? ? -172.86 142.78 104 16 GLN A 41 ? ? -37.86 107.69 105 16 TYR A 42 ? ? -36.47 -39.41 106 16 LYS A 55 ? ? -49.90 165.21 107 16 GLU A 68 ? ? -41.57 162.55 108 16 ILE A 72 ? ? -69.36 97.09 109 16 LYS A 81 ? ? -171.67 134.69 110 16 ASN A 82 ? ? 70.65 44.39 111 16 TYR A 97 ? ? -46.44 -70.19 112 17 MET A 8 ? ? 36.88 36.76 113 17 VAL A 12 ? ? 39.94 34.47 114 17 LEU A 30 ? ? -87.70 -74.96 115 17 GLN A 41 ? ? -34.43 115.41 116 17 ASN A 57 ? ? -109.43 43.38 117 17 ARG A 65 ? ? -70.92 -70.48 118 17 ILE A 72 ? ? -63.80 90.78 119 17 PRO A 113 ? ? -69.76 -172.59 120 18 SER A 3 ? ? -49.81 100.51 121 18 SER A 5 ? ? -35.41 112.91 122 18 ASN A 9 ? ? -166.38 117.73 123 18 TYR A 14 ? ? -172.75 135.60 124 18 PHE A 32 ? ? -170.78 144.21 125 18 LYS A 55 ? ? -49.92 151.10 126 18 ILE A 72 ? ? -63.39 94.91 127 18 PRO A 117 ? ? -69.79 92.24 128 19 TYR A 14 ? ? -35.06 130.05 129 19 LEU A 30 ? ? -105.27 -73.19 130 19 THR A 38 ? ? -39.66 -31.52 131 19 GLN A 41 ? ? -56.61 104.89 132 19 ASN A 57 ? ? -99.04 41.59 133 19 ARG A 65 ? ? -60.32 -73.46 134 19 ILE A 72 ? ? -67.98 98.59 135 19 GLN A 78 ? ? -51.79 -174.17 136 19 SER A 118 ? ? -36.53 140.41 137 19 SER A 119 ? ? -57.57 -175.06 138 20 SER A 6 ? ? -49.44 162.26 139 20 VAL A 12 ? ? -38.32 100.33 140 20 LEU A 30 ? ? -95.25 -74.11 141 20 ILE A 72 ? ? -62.43 96.72 142 20 VAL A 109 ? ? -34.68 143.43 #